Pregenerated sensors for TUFM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073838Ensembl transcript IDs: ENSMUST00000098048.6, ENSMUST00000106392.10, ENSMUST00000206055.2, ENSMUST00000206572.2
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGGACAGTTTTATTTGCCTCCCTCTCCTGACAGGCCACTCATTGTaGGCAGGAGAAATGTCCAGAGGTGTACTCTGCCTGGATACAGCC | + |
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Preference number: 1 (lower is better) Translates to: WDSFICLPLLTGHSL*AGEMSRGVLCLDTA Trigger: GGCTGTATCCAGGCAGAGTACACCTCTGGACATTTCTCCTGCTCACAATGAGTGGCCTGTCAGGAGAGGGAGGCAAATAAAACTGTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| 3UTR GCA 90 bp | TATACTAACTACACCAGCCTTGAACTCAAGAGATTCACATGCCTCTaGCTTCCAGCTGCTAAGATTAAAGTCATGGGCTACCACAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: YTNYTSLELKRFTCL*LPAAKIKVMGYHSP Trigger: TGGGCTGTGGTAGCCCATGACTTTAATCTTAGCAGCTGGAAGGCAGAGGCATGTGAATCTCTTGAGTTCAAGGCTGGTGTAGTTAGTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206572.2 |
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| 3UTR GCA 90 bp | GCTCTGTATACTAACTACACCAGCCTTGAACTCAAGAGATTCACATaGCTCTGCCTTCCAGCTGCTAAGATTAAAGTCATGGGCTACCAC | + |
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Preference number: 1 (lower is better) Translates to: ALYTNYTSLELKRFT*LCLPAAKIKVMGYH Trigger: GTGGTAGCCCATGACTTTAATCTTAGCAGCTGGAAGGCAGAGGCATGTGAATCTCTTGAGTTCAAGGCTGGTGTAGTTAGTATACAGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206572.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGAAATGTCCAGAGGTGTACTCTGCCTGGATACAGCCTGTGTCCACAGTGGGCCACAGTGGGAACGCTaGCCAGGGCAGCCTGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: GEMSRGVLCLDTACVHSGPQWER*PGQPEA Trigger: AGCTTCAGGCTGCCCTGGTCAGCGTTCCCACTGTGG...CCCACTGTGGACACAGGCTGTATCCAGGCAGAGTACACCTCTGGACATTTCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| 3UTR-3UTR TCA 90 bp | GAGAAATGTCCAGAGGTGTACTCTGCCTGGATACAGCCTGTGTCCACAGTGGGACCACAGTGGGAACGCTaGCCAGGGCAGCCTTATGCC | + |
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Preference number: 2 (lower is better) Translates to: EKCPEVYSAWIQPVSTVGPQWER*PGQPYA Trigger: GGCATAAGGCTGCCCTGGTCAGCGTTCCCACTGTGG...TCCCACTGTGGACACAGGCTGTATCCAGGCAGAGTACACCTCTGGACATTTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| 3UTR-3UTR TCA 90 bp | TCCATGGGACAGTTTTATTTGCCTCCCTCTCCTGACAGGCCACTCATTGTGAGCTTTGCCTCCCTCTCCTaGCAGGCCACTCATTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: SMGQFYLPPSPDRPLIVSFASLS*QATHCE Trigger: CTCACAATGAGTGGCCTGTCAGGAGAGGGAGGCAAA...GCTCACAATGAGTGGCCTGTCAGGAGAGGGAGGCAAATAAAACTGTCCCATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| 3UTR-3UTR TCA 90 bp | GACCAGGGCAGCCTGAAGCTCAATAACCTGAGCAGAAGTCCAGACTCAGCTCCATGCCATCCCTCAAGGTaGAACGTTGGCCTTTCTCTA | + |
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Preference number: 2 (lower is better) Translates to: DQGSLKLNNLSRSPDSAPCHPSR*NVGLSL Trigger: TAGAGAAAGGCCAACGTTTCACCTTGAGGGATGGCA...TGGAGCTGAGTCTGGACTTCTGCTCAGGTTATTGAGCTTCAGGCTGCCCTGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106392.10 |
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| 3UTR-3UTR GCA 90 bp | GCAGGAGAAATGTCCAGAGGTGTACTCTGCCTGGATACAGCCTGTGTCCACAGTTCCAGAGGTGTACTCTaGCTGGATACAGCCTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: AGEMSRGVLCLDTACVHSSRGVL*LDTACV Trigger: GACACAGGCTGTATCCAGGCAGAGTACACCTCTGGA...ACTGTGGACACAGGCTGTATCCAGGCAGAGTACACCTCTGGACATTTCTCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| 3UTR-3UTR GCA 90 bp | GAGAAATGTCCAGAGGTGTACTCTGCCTGGATACAGCCTGTGTCCACAGTGGGATCCAGAGGTGTACTCTaGCTGGATACAGCCTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: EKCPEVYSAWIQPVSTVGSRGVL*LDTACV Trigger: GACACAGGCTGTATCCAGGCAGAGTACACCTCTGGA...TCCCACTGTGGACACAGGCTGTATCCAGGCAGAGTACACCTCTGGACATTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| 3UTR-3UTR TCA 90 bp | TCCATGGGACAGTTTTATTTGCCTCCCTCTCCTGACAGGCCACTCATTGTGAGCAGACTCAGCTCCACTTaGTGTTCTTGTCCTCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: SMGQFYLPPSPDRPLIVSRLSST*CSCPPQ Trigger: CTGAGGAGGACAAGAACATCAAGTGGAGCTGAGTCT...GCTCACAATGAGTGGCCTGTCAGGAGAGGGAGGCAAATAAAACTGTCCCATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106392.10 |
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| 3UTR-3UTR TCA 90 bp | GGCACACGCAAACAGCATGGAAAAAGTAAAGGGACCATAATCGGGAATTTGGTAAGCCCTTCTTGTGTTTaGGACAGGATTTCGCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: GTRKQHGKSKGTIIGNLVSPSCV*DRISLC Trigger: ACACAGCGAAATCCTGTCTCAAACACAAGAAGGGCT...TACCAAATTCCCGATTATGGTCCCTTTACTTTTTCCATGCTGTTTGCGTGTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206572.2 |
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| 3UTR TCA 72 bp | TTTATTTGCCTCCCTCTCCTGACAGGCCACTCATTGTaGGCAGGAGAAATGTCCAGAGGTGTACTCTGCCTG | + |
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Preference number: 3 (lower is better) Translates to: FICLPLLTGHSL*AGEMSRGVLCL Trigger: CAGGCAGAGTACACCTCTGGACATTTCTCCTGCTCACAATGAGTGGCCTGTCAGGAGAGGGAGGCAAATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| 3UTR TCA 72 bp | GTTATCCATGGGACAGTTTTATTTGCCTCCCTCTCCTaGCAGGCCACTCATTGTGAGCAGGAGAAATGTCCA | + |
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Preference number: 3 (lower is better) Translates to: VIHGTVLFASLS*QATHCEQEKCP Trigger: TGGACATTTCTCCTGCTCACAATGAGTGGCCTGTCAGGAGAGGGAGGCAAATAAAACTGTCCCATGGATAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106392.10 |
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| 3UTR TCA 72 bp | TTAGTCAACAGGATTTTCCTGAGCCCTTCTTGTGTTTaGGACAGGATTTCGCTGTGTACCCCTAACTGCCCT | + |
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Preference number: 3 (lower is better) Translates to: LVNRIFLSPSCV*DRISLCTPNCP Trigger: AGGGCAGTTAGGGGTACACAGCGAAATCCTGTCTCAAACACAAGAAGGGCTCAGGAAAATCCTGTTGACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206572.2 |
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| 3UTR CCA 72 bp | CATGCCTCTGCCTTCCAGCTGCTAAGATTAAAGTCATaGGCTACCACAGCCCAGTTCTATTCCTTTTATATC | + |
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Preference number: 3 (lower is better) Translates to: HASAFQLLRLKS*ATTAQFYSFYI Trigger: GATATAAAAGGAATAGAACTGGGCTGTGGTAGCCCATGACTTTAATCTTAGCAGCTGGAAGGCAGAGGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206572.2 |
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| 3UTR GCA 72 bp | ACTAACTACACCAGCCTTGAACTCAAGAGATTCACATaGCTCTGCCTTCCAGCTGCTAAGATTAAAGTCATG | + |
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Preference number: 3 (lower is better) Translates to: TNYTSLELKRFT*LCLPAAKIKVM Trigger: CATGACTTTAATCTTAGCAGCTGGAAGGCAGAGGCATGTGAATCTCTTGAGTTCAAGGCTGGTGTAGTTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206572.2 |
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| CDS-3UTR CCA 90 bp | TATGCCCACAGTGGGAATGCTGACCAGGGCAGCCTTATGCCCACAGTGGGAACGACTGGAGCCCTCACCTaGGCCTCCACCTTCTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: YAHSGNADQGSLMPTVGTTGALT*ASTFWW Trigger: CCACCAGAAGGTGGAGGCCCAGGTGAGGGCTCCAGT...CGTTCCCACTGTGGGCATAAGGCTGCCCTGGTCAGCATTCCCACTGTGGGCATA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106392.10 |
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| CDS-3UTR CCA 90 bp | CAGCCTGTGTCCACAGTGGGAACGCTGACCAGGGCAGCCTTATGCCCACAGTGGAGTCCTCTCCAGGCATaGCAAGTTCCTTCCCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: QPVSTVGTLTRAALCPQWSPLQA*QVPSLE Trigger: CTCCAGGGAAGGAACTTGCCATGCCTGGAGAGGACT...CCACTGTGGGCATAAGGCTGCCCTGGTCAGCGTTCCCACTGTGGACACAGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| CDS-3UTR CCA 90 bp | CCTTATGCCCACAGTGGGAATGCTGACCAGGGCAGCCTTATGCCCACAGTGGGAGAAACCACTCAGCACTaGAGCCCTCACCTGGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: PYAHSGNADQGSLMPTVGETTQH*SPHLGL Trigger: GAGGCCCAGGTGAGGGCTCCAGTGCTGAGTGGTTTC...TCCCACTGTGGGCATAAGGCTGCCCTGGTCAGCATTCCCACTGTGGGCATAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106392.10 |
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| CDS-3UTR TCA 90 bp | ACAGCCTGTGTCCACAGTGGGAACGCTGACCAGGGCAGCCTTATGCCCACAGTGGAGCCGAGCCTACGATaGCTGGAGTTTCCTCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: TACVHSGNADQGSLMPTVEPSLR*LEFPLL Trigger: AAGGAGAGGAAACTCCAGTCATCGTAGGCTCGGCTC...CACTGTGGGCATAAGGCTGCCCTGGTCAGCGTTCCCACTGTGGACACAGGCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| CDS-3UTR GCA 90 bp | GGGAATGCTGACCAGGGCAGCCTTATGCCCACAGTGGGAACGCTGACCAGGGCATTAGCTAGCAGTAAGTaGTCTCGGGTCTGGGGCATG | + |
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Preference number: 4 (lower is better) Translates to: GNADQGSLMPTVGTLTRALASSK*SRVWGM Trigger: CATGCCCCAGACCCGAGAGCACTTACTGCTAGCTAA...TGCCCTGGTCAGCGTTCCCACTGTGGGCATAAGGCTGCCCTGGTCAGCATTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| CDS-3UTR GCA 90 bp | CCAGGGCAGCCTTATGCCCACAGTGGGAATGCTGACCAGGGCAGCCTTATGCCCTTAGCTAGCAGTAAGTaGTCTCGGGTCTGGGGCATG | + |
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Preference number: 4 (lower is better) Translates to: PGQPYAHSGNADQGSLMPLASSK*SRVWGM Trigger: CATGCCCCAGACCCGAGAGCACTTACTGCTAGCTAA...GGGCATAAGGCTGCCCTGGTCAGCATTCCCACTGTGGGCATAAGGCTGCCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| CDS-3UTR TCA 90 bp | TATGCCCACAGTGGGAATGCTGACCAGGGCAGCCTTATGCCCACAGTGGGAACGCGGCTAGAATTTTCGTaGTGGCTGCAGTCAGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: YAHSGNADQGSLMPTVGTRLEFS*WLQSGW Trigger: CCACCCTGACTGCAGCCATCACGAAAATTCTAGCCG...CGTTCCCACTGTGGGCATAAGGCTGCCCTGGTCAGCATTCCCACTGTGGGCATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| CDS-3UTR GCA 90 bp | GGGAATGCTGACCAGGGCAGCCTTATGCCCACAGTGGGAACGCTGACCAGGGCATGTGGAACATCTCAATaGCTGTCACCACAGTGCGGA | + |
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Preference number: 4 (lower is better) Translates to: GNADQGSLMPTVGTLTRACGTSQ*LSPQCG Trigger: TCCGCACTGTGGTGACAGGCATTGAGATGTTCCACA...TGCCCTGGTCAGCGTTCCCACTGTGGGCATAAGGCTGCCCTGGTCAGCATTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| CDS-3UTR CCA 90 bp | TATGCCCACAGTGGGAATGCTGACCAGGGCAGCCTTATGCCCACAGTGGGAACGAGTCCTCTCCAGGCATaGCAAGTTCCTTCCCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: YAHSGNADQGSLMPTVGTSPLQA*QVPSLE Trigger: CTCCAGGGAAGGAACTTGCCATGCCTGGAGAGGACT...CGTTCCCACTGTGGGCATAAGGCTGCCCTGGTCAGCATTCCCACTGTGGGCATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| CDS-3UTR CCA 90 bp | ACAGCCTGTGTCCACAGTGGGAACGCTGACCAGGGCAGCCTTATGCCCACAGTGCAAGGCCAGTGCCAATaGTCTTGTTGCCATCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: TACVHSGNADQGSLMPTVQGQCQ*SCCHPS Trigger: TGAGGGATGGCAACAAGACCATTGGCACTGGCCTTG...CACTGTGGGCATAAGGCTGCCCTGGTCAGCGTTCCCACTGTGGACACAGGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098048.6 |
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| CDS-3UTR CCA 90 bp | CCTTATGCCCACAGTGGGAATGCTGACCAGGGCAGCCTTATGCCCACAGTGGGAAGGGTGGTCTTGCCATaGTCCACATGTCCGATGGTA | + |
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Preference number: 4 (lower is better) Translates to: PYAHSGNADQGSLMPTVGRVVLP*STCPMV Trigger: TACCATCGGACATGTGGACCATGGCAAGACCACCCT...TCCCACTGTGGGCATAAGGCTGCCCTGGTCAGCATTCCCACTGTGGGCATAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| CDS-3UTR CCA 90 bp | TATGCCCACAGTGGGAATGCTGACCAGGGCAGCCTTATGCCCACAGTGGGAACGAGGGTGGTCTTGCCATaGTCCACATGTCCGATGGTA | + |
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Preference number: 4 (lower is better) Translates to: YAHSGNADQGSLMPTVGTRVVLP*STCPMV Trigger: TACCATCGGACATGTGGACCATGGCAAGACCACCCT...CGTTCCCACTGTGGGCATAAGGCTGCCCTGGTCAGCATTCCCACTGTGGGCATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| CDS-3UTR CCA 90 bp | CAGGGCAGCCTTATGCCCACAGTGGGAATGCTGACCAGGGCAGCCTTATGCCCACTCCTCAGTCATGGCTaGTACATCAGTAACAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: QGSLMPTVGMLTRAALCPLLSHG*YISNKA Trigger: GGCCTTGTTACTGATGTACCAGCCATGACTGAGGAG...TGGGCATAAGGCTGCCCTGGTCAGCATTCCCACTGTGGGCATAAGGCTGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098048.6 |
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| CDS-3UTR GCA 90 bp | TATGCCCACAGTGGGAATGCTGACCAGGGCAGCCTTATGCCCACAGTGGGAACGAATTTTCGTGATGGCTaGAGTCAGGGTGGTCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: YAHSGNADQGSLMPTVGTNFRDG*SQGGLA Trigger: GGCAAGACCACCCTGACTGCAGCCATCACGAAAATT...CGTTCCCACTGTGGGCATAAGGCTGCCCTGGTCAGCATTCCCACTGTGGGCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| CDS-3UTR CCA 90 bp | GCAGGAGAAATGTCCAGAGGTGTACTCTGCCTGGATACAGCCTGTGTCCACAGTCCGAGCTCGCTCCTCTaGGGCATTGTCTATCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: AGEMSRGVLCLDTACVHSPSSLL*GIVYLL Trigger: GAGGAGATAGACAATGCCCCAGAGGAGCGAGCTCGG...ACTGTGGACACAGGCTGTATCCAGGCAGAGTACACCTCTGGACATTTCTCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| CDS-3UTR TCA 90 bp | CAGTTTTATTTGCCTCCCTCTCCTGACAGGCCACTCATTGTGAGCAGGAGAAATTCCCTGGAGGCAAGATaGCTCGACAGGCCATGTCCC | + |
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Preference number: 4 (lower is better) Translates to: QFYLPPSPDRPLIVSRRNSLEAR*LDRPCP Trigger: GGGACATGGCCTGTCGAGTCATCTTGCCTCCAGGGA...ATTTCTCCTGCTCACAATGAGTGGCCTGTCAGGAGAGGGAGGCAAATAAAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| CDS-3UTR TCA 90 bp | GAGAAATGTCCAGAGGTGTACTCTGCCTGGATACAGCCTGTGTCCACAGTGGGATGCCATCCCTCAAGGTaGAACGTTGGCCTTTCTCTA | + |
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Preference number: 4 (lower is better) Translates to: EKCPEVYSAWIQPVSTVGCHPSR*NVGLSL Trigger: TAGAGAAAGGCCAACGTTTCACCTTGAGGGATGGCA...TCCCACTGTGGACACAGGCTGTATCCAGGCAGAGTACACCTCTGGACATTTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098048.6 |
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| CDS-3UTR GCA 90 bp | GCAGGAGAAATGTCCAGAGGTGTACTCTGCCTGGATACAGCCTGTGTCCACAGTTGTGGAACATCTCAATaGCTGTCACCACAGTGCGGA | + |
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Preference number: 4 (lower is better) Translates to: AGEMSRGVLCLDTACVHSCGTSQ*LSPQCG Trigger: TCCGCACTGTGGTGACAGGCATTGAGATGTTCCACA...ACTGTGGACACAGGCTGTATCCAGGCAGAGTACACCTCTGGACATTTCTCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| CDS-3UTR CCA 90 bp | TTTTATTTGCCTCCCTCTCCTGACAGGCCACTCATTGTGAGCAGGAGAAATGTCCCGAGCTCGCTCCTCTaGGGCATTGTCTATCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: FYLPPSPDRPLIVSRRNVPSSLL*GIVYLL Trigger: GAGGAGATAGACAATGCCCCAGAGGAGCGAGCTCGG...GACATTTCTCCTGCTCACAATGAGTGGCCTGTCAGGAGAGGGAGGCAAATAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| CDS-3UTR CCA 90 bp | TCCATGGGACAGTTTTATTTGCCTCCCTCTCCTGACAGGCCACTCATTGTGAGCGGCAAGTTCCTTCCCTaGAGGCAAGATGACTCGACA | + |
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Preference number: 4 (lower is better) Translates to: SMGQFYLPPSPDRPLIVSGKFLP*RQDDST Trigger: TGTCGAGTCATCTTGCCTCCAGGGAAGGAACTTGCC...GCTCACAATGAGTGGCCTGTCAGGAGAGGGAGGCAAATAAAACTGTCCCATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| CDS-3UTR TCA 90 bp | TTATCCATGGGACAGTTTTATTTGCCTCCCTCTCCTGACAGGCCACTCATTGTGCGGCTAGAATTTTCGTaGTGGCTGCAGTCAGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LSMGQFYLPPSPDRPLIVRLEFS*WLQSGW Trigger: CCACCCTGACTGCAGCCATCACGAAAATTCTAGCCG...CACAATGAGTGGCCTGTCAGGAGAGGGAGGCAAATAAAACTGTCCCATGGATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| CDS-3UTR TCA 90 bp | TTTTATTTGCCTCCCTCTCCTGACAGGCCACTCATTGTGAGCAGGAGAAATGTCGAGCCGAGCCTACGATaGCTGGAGTTTCCTCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: FYLPPSPDRPLIVSRRNVEPSLR*LEFPLL Trigger: AAGGAGAGGAAACTCCAGTCATCGTAGGCTCGGCTC...GACATTTCTCCTGCTCACAATGAGTGGCCTGTCAGGAGAGGGAGGCAAATAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| CDS-3UTR GCA 90 bp | TCCATGGGACAGTTTTATTTGCCTCCCTCTCCTGACAGGCCACTCATTGTGAGCAATTTTCGTGATGGCTaGAGTCAGGGTGGTCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: SMGQFYLPPSPDRPLIVSNFRDG*SQGGLA Trigger: GGCAAGACCACCCTGACTGCAGCCATCACGAAAATT...GCTCACAATGAGTGGCCTGTCAGGAGAGGGAGGCAAATAAAACTGTCCCATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| CDS-3UTR CCA 90 bp | TTTTATTTGCCTCCCTCTCCTGACAGGCCACTCATTGTGAGCAGGAGAAATGTCGGCAAGTTCCTTCCCTaGAGGCAAGATGACTCGACA | + |
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Preference number: 4 (lower is better) Translates to: FYLPPSPDRPLIVSRRNVGKFLP*RQDDST Trigger: TGTCGAGTCATCTTGCCTCCAGGGAAGGAACTTGCC...GACATTTCTCCTGCTCACAATGAGTGGCCTGTCAGGAGAGGGAGGCAAATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| CDS-3UTR CCA 90 bp | TATTTGCCTCCCTCTCCTGACAGGCCACTCATTGTGAGCAGGAGAAATGTCCAGCGAGCCTACGATGACTaGAGTTTCCTCTCCTTTATA | + |
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Preference number: 4 (lower is better) Translates to: YLPPSPDRPLIVSRRNVQRAYDD*SFLSFI Trigger: TATAAAGGAGAGGAAACTCCAGTCATCGTAGGCTCG...CTGGACATTTCTCCTGCTCACAATGAGTGGCCTGTCAGGAGAGGGAGGCAAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| CDS-3UTR CCA 90 bp | TTCACATGCCTCTGCCTTCCAGCTGCTAAGATTAAAGTCATGGGCTACCACAGCTCAACATACCTTCCCTaGAGGCAAGATGACTCGACA | + |
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Preference number: 4 (lower is better) Translates to: FTCLCLPAAKIKVMGYHSSTYLP*RQDDST Trigger: TGTCGAGTCATCTTGCCTCCAGGGAAGGTATGTTGA...GCTGTGGTAGCCCATGACTTTAATCTTAGCAGCTGGAAGGCAGAGGCATGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206572.2 |
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| CDS-3UTR GCA 90 bp | CAGTTTTATTTGCCTCCCTCTCCTGACAGGCCACTCATTGTGAGCAGGAGAAATTGCCTGTCACCACAGTaGGGATGTTCTTGTTATGTC | + |
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Preference number: 4 (lower is better) Translates to: QFYLPPSPDRPLIVSRRNCLSPQ*GCSCYV Trigger: GACATAACAAGAACATCCGCACTGTGGTGACAGGCA...ATTTCTCCTGCTCACAATGAGTGGCCTGTCAGGAGAGGGAGGCAAATAAAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| CDS-3UTR GCA 90 bp | AACTCAAGAGATTCACATGCCTCTGCCTTCCAGCTGCTAAGATTAAAGTCATGGTGTGGAACATCTCAATaGCTGTCACCACAGTGCGGA | + |
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Preference number: 4 (lower is better) Translates to: NSRDSHASAFQLLRLKSWCGTSQ*LSPQCG Trigger: TCCGCACTGTGGTGACAGGCATTGAGATGTTCCACA...CCATGACTTTAATCTTAGCAGCTGGAAGGCAGAGGCATGTGAATCTCTTGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206572.2 |
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| CDS-3UTR CAA 90 bp | CCAGGGCAGCCTTATGCCCACAGTGGGAATGCTGACCAGGGCAGCCTTATGCCCTGGACAGCGTCTGCCTaGTTCACGTACACCACAACA | + |
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Preference number: 5 (lower is better) Translates to: PGQPYAHSGNADQGSLMPWTASA*FTYTTT Trigger: TGTTGTGGTGTACGTGAACAAGGCAGACGCTGTCCA...GGGCATAAGGCTGCCCTGGTCAGCATTCCCACTGTGGGCATAAGGCTGCCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| CDS-3UTR CAA 90 bp | CCAGGGCAGCCTTATGCCCACAGTGGGAATGCTGACCAGGGCAGCCTTATGCCCATCTCCTCGTACTTCTaGAACTTAGCTCCACCTCCC | + |
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Preference number: 5 (lower is better) Translates to: PGQPYAHSGNADQGSLMPISSYF*NLAPPP Trigger: GGGAGGTGGAGCTAAGTTCAAGAAGTACGAGGAGAT...GGGCATAAGGCTGCCCTGGTCAGCATTCCCACTGTGGGCATAAGGCTGCCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| CDS-3UTR CAA 90 bp | CTTATGCCCACAGTGGGAATGCTGACCAGGGCAGCCTTATGCCCACAGTGGGAATGGACAGCGTCTGCCTaGTTCACGTACACCACAACA | + |
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Preference number: 5 (lower is better) Translates to: LMPTVGMLTRAALCPQWEWTASA*FTYTTT Trigger: TGTTGTGGTGTACGTGAACAAGGCAGACGCTGTCCA...TTCCCACTGTGGGCATAAGGCTGCCCTGGTCAGCATTCCCACTGTGGGCATAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| CDS-3UTR CAA 90 bp | TATGCCCACAGTGGGAATGCTGACCAGGGCAGCCTTATGCCCACAGTGGGAACGACAGTGCGGATGTTCTaGTTATGTCCCAGCAACTCA | + |
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Preference number: 5 (lower is better) Translates to: YAHSGNADQGSLMPTVGTTVRMF*LCPSNS Trigger: TGAGTTGCTGGGACATAACAAGAACATCCGCACTGT...CGTTCCCACTGTGGGCATAAGGCTGCCCTGGTCAGCATTCCCACTGTGGGCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| CDS-3UTR CAA 90 bp | TTTTATTTGCCTCCCTCTCCTGACAGGCCACTCATTGTGAGCAGGAGAAATGTCACAGTGCGGATGTTCTaGTTATGTCCCAGCAACTCA | + |
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Preference number: 5 (lower is better) Translates to: FYLPPSPDRPLIVSRRNVTVRMF*LCPSNS Trigger: TGAGTTGCTGGGACATAACAAGAACATCCGCACTGT...GACATTTCTCCTGCTCACAATGAGTGGCCTGTCAGGAGAGGGAGGCAAATAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| CDS TCA 72 bp | CTTGCAGAAATGGGGTCGGGCTGGCGCAGAGACCGCTaGAGCGGGGCGTCGCTCGCAATAGAGTGGCTGCCG | + |
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Preference number: 6 (lower is better) Translates to: LAEMGSGWRRDR*SGASLAIEWLP Trigger: CGGCAGCCACTCTATTGCGAGCGACGCCCCGCTTCAGCGGTCTCTGCGCCAGCCCGACCCCATTTCTGCAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 |
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| CDS TCA 72 bp | TGTCACCACTGTGCCCCGGCCAGGAATAGAGTAGACTaGCTCTACAGGGAGCAGGAAGGGCTTGTCCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: CHHCAPARNRVD*LYREQEGLVQV Trigger: GACCTGGACAAGCCCTTCCTGCTCCCTGTAGAGTCAGTCTACTCTATTCCTGGCCGGGGCACAGTGGTGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098048.6 ENSMUST00000106392.10 ENSMUST00000206055.2 |
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