Pregenerated sensors for TUBGCP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027263Ensembl transcript IDs: ENSMUST00000039541.12, ENSMUST00000110657.2, ENSMUST00000110658.8, ENSMUST00000186659.7
Found 353 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTGGTGACAGACCCCTCATGCCCAGCCTCGGTGCTCAAGTGTGCTaGAGCCTTGCAACTGCCTGTGGTATCACAAGAATGGGTGATCCA | + |
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Preference number: 1 (lower is better) Translates to: GGDRPLMPSLGAQVC*SLATACGITRMGDP Trigger: TGGATCACCCATTCTTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGGGCATGAGGGGTCTGTCACCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| 3UTR GCA 90 bp | GACATTGCTTTAGGGGTATTTGATGTGGTGGTGACAGACCCCTCATaGCCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTTGCAACTGCCT | + |
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Preference number: 1 (lower is better) Translates to: DIALGVFDVVVTDPS*PASVLKCAEALQLP Trigger: AGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGGGCATGAGGGGTCTGTCACCACCACATCAAATACCCCTAAAGCAATGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| 3UTR TCA 90 bp | AGTGTGCTGAAGCCTTGCAACTGCCTGTGGTATCACAAGAATGGGTaGTCCAGTGCCTCATTGTTGGGGAGAGAATTGGATTCAAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: SVLKPCNCLWYHKNG*SSASLLGRELDSSS Trigger: GCTGCTTGAATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTCTTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| 3UTR CCA 90 bp | CTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGTATCACAAGAATaGGTGATCCAGTGCCTCATTGTTGGGGAGAGAATTGGATTCAAG | + |
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Preference number: 1 (lower is better) Translates to: LKCAEALQLPVVSQE*VIQCLIVGERIGFK Trigger: CTTGAATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTCTTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| 3UTR TCA 90 bp | TTTTCTCATTTGGTGGTGACACAGAAGCTGACCTGTTCAGGAGCGTaGTTCCGTTCTTACATGAGCCAACCCACTGTTTACTGTGGTTAT | + |
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Preference number: 1 (lower is better) Translates to: FSHLVVTQKLTCSGA*FRSYMSQPTVYCGY Trigger: ATAACCACAGTAAACAGTGGGTTGGCTCATGTAAGAACGGAATCACGCTCCTGAACAGGTCAGCTTCTGTGTCACCACCAAATGAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
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| 3UTR TCA 90 bp | GCCCGGATGTTTCATTCTTGTCCAGCTTGGAGGGAAAGATGTCAGTaGAGTGTTTTGTTTATGCTGATGAGAACATTAGTATGTTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: ARMFHSCPAWRERCQ*SVLFMLMRTLVCSQ Trigger: CTGAGAACATACTAATGTTCTCATCAGCATAAACAAAACACTTCACTGACATCTTTCCCTCCAAGCTGGACAAGAATGAAACATCCGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
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| 3UTR CAA 90 bp | ACAGACCCCTCATGCCCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTaGCAACTGCCTGTGGTATCACAAGAATGGGTGATCCAGTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: TDPSCPASVLKCAEA*QLPVVSQEWVIQCL Trigger: GAGGCACTGGATCACCCATTCTTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGGGCATGAGGGGTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| 3UTR-3UTR GCA 90 bp | GGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCCCAGCCTCGGTGCTCAAGCTCTTTAGCCAGAATTaGCCTTTTACTAGTCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: GVFDVVVTDPSCPASVLKLFSQN*PFTSLK Trigger: TTTCAGACTAGTAAAAGGGCAATTCTGGCTAAAGAG...CTTGAGCACCGAGGCTGGGCATGAGGGGTCTGTCACCACCACATCAAATACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTCTGAAGTTGTCAGCAGGCTTGTCACTTTAGCAGTACAGCAAACAAAGGGATATGTTCTCAGCCCGTaGTGGCTAGGCTATCTGACC | + |
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Preference number: 2 (lower is better) Translates to: FSEVVSRLVTLAVQQTKGYVLSP*WLGYLT Trigger: GGTCAGATAGCCTAGCCACCACGGGCTGAGAACATA...TCCCTTTGTTTGCTGTACTGCTAAAGTGACAAGCCTGCTGACAACTTCAGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
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| 3UTR-3UTR TCA 90 bp | TGTTCTCAGCCCGTGGTGGCTAGGCTATCTGACCATAAAACCTTAACTCATGTGGATTCCGTTCTTACATaGGCCAACCCACTGTTTACT | + |
|
Preference number: 2 (lower is better) Translates to: CSQPVVARLSDHKTLTHVDSVLT*ANPLFT Trigger: AGTAAACAGTGGGTTGGCTCATGTAAGAACGGAATC...CACATGAGTTAAGGTTTTATGGTCAGATAGCCTAGCCACCACGGGCTGAGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
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| 3UTR-3UTR TCA 90 bp | TTTACAGACATTGCTTTAGGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCGATTCCGTTCTTACATaGGCCAACCCACTGTTTACT | + |
|
Preference number: 2 (lower is better) Translates to: FTDIALGVFDVVVTDPSCDSVLT*ANPLFT Trigger: AGTAAACAGTGGGTTGGCTCATGTAAGAACGGAATC...GCATGAGGGGTCTGTCACCACCACATCAAATACCCCTAAAGCAATGTCTGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
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| 3UTR-3UTR TCA 90 bp | AGGATCTTCTCTGAAGTTGTCAGCAGGCTTGTCACTTTAGCAGTACAGCAAACAGGTAGACAGTGTAGATaGAGAGAGGACTCAGTGACT | + |
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Preference number: 2 (lower is better) Translates to: RIFSEVVSRLVTLAVQQTGRQCR*REDSVT Trigger: AGTCACTGAGTCCTCTCTTCATCTACACTGTCTACC...TGTTTGCTGTACTGCTAAAGTGACAAGCCTGCTGACAACTTCAGAGAAGATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
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| 3UTR-3UTR CCA 90 bp | CTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGTATCACAAGAATGGGTGATCACAGACATCAGAATGTaGCAGGGCTGTTTCATTTTT | + |
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Preference number: 2 (lower is better) Translates to: LKCAEALQLPVVSQEWVITDIRM*QGCFIF Trigger: AAAAATGAAACAGCCCTGCCACATTCTGATGTCTGT...GATCACCCATTCTTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| 3UTR-3UTR TCA 90 bp | TTTATTTTAGATTATGAACATACAGTACCTAGAGTAGAGGGCTTTGGTTTGGCAGAAGAGAGGACTCAGTaGCTACAGACTGAGGCCCGG | + |
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Preference number: 2 (lower is better) Translates to: FILDYEHTVPRVEGFGLAEERTQ*LQTEAR Trigger: CCGGGCCTCAGTCTGTAGTCACTGAGTCCTCTCTTC...TGCCAAACCAAAGCCCTCTACTCTAGGTACTGTATGTTCATAATCTAAAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTCTGAAGTTGTCAGCAGGCTTGTCACTTTAGCAGTACAGCAAACAAAGGGAGTTCCCCTACAGGAATaGCAGGGAGGATTTTTATAC | + |
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Preference number: 2 (lower is better) Translates to: FSEVVSRLVTLAVQQTKGVPLQE*QGGFLY Trigger: GTATAAAAATCCTCCCTGCCATTCCTGTAGGGGAAC...TCCCTTTGTTTGCTGTACTGCTAAAGTGACAAGCCTGCTGACAACTTCAGAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
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| 3UTR CAA 90 bp | CAGAACATGATAAACATAGGATCTTCTCTGAAGTTGTCAGCAGGCTaGTCACTCTGCATTTCTTCTAGAAGACCCTTTCAGCAGTCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: QNMINIGSSLKLSAG*SLCISSRRPFQQSA Trigger: TGCAGACTGCTGAAAGGGTCTTCTAGAAGAAATGCAGAGTGACAAGCCTGCTGACAACTTCAGAGAAGATCCTATGTTTATCATGTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186659.7 |
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| 3UTR-3UTR GCA 90 bp | GAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGAATTGGATTCAAGCAGCATGGATTTTTATACCTCTaGATTTCTTCTAGAAGACCC | + |
|
Preference number: 2 (lower is better) Translates to: EWVIQCLIVGERIGFKQHGFLYL*ISSRRP Trigger: GGGTCTTCTAGAAGAAATGCAGAGGTATAAAAATCC...ATGCTGCTTGAATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
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| 3UTR-3UTR CCA 90 bp | ACTTTAGCAGTACAGCAAACAAAGGGAGATAAAAATAGAGGAGTGAGCTTTATTTATGTTCTCAGCCCGTaGTGGCTAGGCTATCTGACC | + |
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Preference number: 2 (lower is better) Translates to: TLAVQQTKGDKNRGVSFIYVLSP*WLGYLT Trigger: GGTCAGATAGCCTAGCCACCACGGGCTGAGAACATA...AATAAAGCTCACTCCTCTATTTTTATCTCCCTTTGTTTGCTGTACTGCTAAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
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| 3UTR-3UTR GCA 90 bp | TTTATTTTAGATTATGAACATACAGTACCTAGAGTAGAGGGCTTTGGTTTGGCAAGTGTGCTGAAGCCTTaGAACTGCCTGTGGTATCAC | + |
|
Preference number: 2 (lower is better) Translates to: FILDYEHTVPRVEGFGLASVLKP*NCLWYH Trigger: GTGATACCACAGGCAGTTGCAAGGCTTCAGCACACT...TGCCAAACCAAAGCCCTCTACTCTAGGTACTGTATGTTCATAATCTAAAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| 3UTR-3UTR CCA 90 bp | GAACATGATAAACATAGGATCTTCTCTGAAGTTGTCAGCAGGCTTGTCACTTTAGTTCCCCTACAGGAATaGCAGGGAGGATTTTTATAC | + |
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Preference number: 2 (lower is better) Translates to: EHDKHRIFSEVVSRLVTLVPLQE*QGGFLY Trigger: GTATAAAAATCCTCCCTGCCATTCCTGTAGGGGAAC...TAAAGTGACAAGCCTGCTGACAACTTCAGAGAAGATCCTATGTTTATCATGTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
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| 3UTR-3UTR TCA 90 bp | ACTTTAGCAGTACAGCAAACAAAGGGAGATAAAAATAGAGGAGTGAGCTTTATTAGCTCACAGGCTCTCTaGAGGGTTTTCTCATTTGGT | + |
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Preference number: 2 (lower is better) Translates to: TLAVQQTKGDKNRGVSFISSQAL*RVFSFG Trigger: ACCAAATGAGAAAACCCTTCAGAGAGCCTGTGAGCT...AATAAAGCTCACTCCTCTATTTTTATCTCCCTTTGTTTGCTGTACTGCTAAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
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| 3UTR-3UTR GCA 90 bp | ATAAACCCCGGTTACACAAATGAACCCACCCAACAGATGTCTTCAAAATCCTTCGGATTTTTATACCTCTaGATTTCTTCTAGAAGACCC | + |
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Preference number: 2 (lower is better) Translates to: INPGYTNEPTQQMSSKSFGFLYL*ISSRRP Trigger: GGGTCTTCTAGAAGAAATGCAGAGGTATAAAAATCC...GAAGGATTTTGAAGACATCTGTTGGGTGGGTTCATTTGTGTAACCGGGGTTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAACATGATAAACATAGGATCTTCTCTGAAGTTGTCAGCAGGCTTGTCACTTACAGACATCAGAATGTaGCAGGGCTGTTTCATTTTT | + |
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Preference number: 2 (lower is better) Translates to: QNMINIGSSLKLSAGLSLTDIRM*QGCFIF Trigger: AAAAATGAAACAGCCCTGCCACATTCTGATGTCTGT...AAGTGACAAGCCTGCTGACAACTTCAGAGAAGATCCTATGTTTATCATGTTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
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| 3UTR CAA 90 bp | GTACAGCAAACAAAGGGAGATAAAAATAGAGGAGTGAGCTTTATTTaGTGGCATCACTGTCAAGGTTATCCCAGGCTACCTAAAATGTTA | + |
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Preference number: 2 (lower is better) Translates to: VQQTKGDKNRGVSFI*WHHCQGYPRLPKML Trigger: TAACATTTTAGGTAGCCTGGGATAACCTTGACAGTGATGCCACAAAATAAAGCTCACTCCTCTATTTTTATCTCCCTTTGTTTGCTGTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
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| 3UTR-3UTR CCA 90 bp | GAACATGATAAACATAGGATCTTCTCTGAAGTTGTCAGCAGGCTTGTCACTTTAACAGACATCAGAATGTaGCAGGGCTGTTTCATTTTT | + |
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Preference number: 2 (lower is better) Translates to: EHDKHRIFSEVVSRLVTLTDIRM*QGCFIF Trigger: AAAAATGAAACAGCCCTGCCACATTCTGATGTCTGT...TAAAGTGACAAGCCTGCTGACAACTTCAGAGAAGATCCTATGTTTATCATGTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
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| 3UTR CAA 90 bp | TGTGAGCAATCACCGACAATAGCTAAATTGAGTATGTGTGGCTGTTaGAATAGTACTTTATTTACAAAAACAAGCAGCAGGCTGTTATCT | + |
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Preference number: 2 (lower is better) Translates to: CEQSPTIAKLSMCGC*NSTLFTKTSSRLLS Trigger: AGATAACAGCCTGCTGCTTGTTTTTGTAAATAAAGTACTATTCAAACAGCCACACATACTCAATTTAGCTATTGTCGGTGATTGCTCACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
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| 3UTR-3UTR CCA 90 bp | ACTTTAGCAGTACAGCAAACAAAGGGAGATAAAAATAGAGGAGTGAGCTTTATTACCCACTGTTTACTGTaGTTATCTTCCATAGGAATA | + |
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Preference number: 2 (lower is better) Translates to: TLAVQQTKGDKNRGVSFITHCLL*LSSIGI Trigger: TATTCCTATGGAAGATAACCACAGTAAACAGTGGGT...AATAAAGCTCACTCCTCTATTTTTATCTCCCTTTGTTTGCTGTACTGCTAAAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
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| 3UTR TCA 72 bp | AGACCCCTCATGCCCAGCCTCGGTGCTCAAGTGTGCTaGAGCCTTGCAACTGCCTGTGGTATCACAAGAATG | + |
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Preference number: 3 (lower is better) Translates to: RPLMPSLGAQVC*SLATACGITRM Trigger: CATTCTTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGGGCATGAGGGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| 3UTR GCA 72 bp | TTAGGGGTATTTGATGTGGTGGTGACAGACCCCTCATaGCCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTTG | + |
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Preference number: 3 (lower is better) Translates to: LGVFDVVVTDPS*PASVLKCAEAL Trigger: CAAGGCTTCAGCACACTTGAGCACCGAGGCTGGGCATGAGGGGTCTGTCACCACCACATCAAATACCCCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| 3UTR-3UTR CAA 90 bp | GTGACAGACCCCTCATGCCCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTTGCAAAAGTTGTCAGCAGGCTaGTCACTCTGCATTTCTTCT | + |
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Preference number: 3 (lower is better) Translates to: VTDPSCPASVLKCAEALQKLSAG*SLCISS Trigger: AGAAGAAATGCAGAGTGACAAGCCTGCTGACAACTT...TTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGGGCATGAGGGGTCTGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186659.7 |
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| 3UTR-3UTR CAA 90 bp | CCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGTATCACAAGCAGTCTGCAGGCATTaGATGAATGATTTGAGAGAT | + |
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Preference number: 3 (lower is better) Translates to: PASVLKCAEALQLPVVSQAVCRH*MNDLRD Trigger: ATCTCTCAAATCATTCATCAAATGCCTGCAGACTGC...TTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| 3UTR CCA 72 bp | GCTGAAGCCTTGCAACTGCCTGTGGTATCACAAGAATaGGTGATCCAGTGCCTCATTGTTGGGGAGAGAATT | + |
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Preference number: 3 (lower is better) Translates to: AEALQLPVVSQE*VIQCLIVGERI Trigger: AATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTCTTGTGATACCACAGGCAGTTGCAAGGCTTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| 3UTR TCA 72 bp | AAGCCTTGCAACTGCCTGTGGTATCACAAGAATGGGTaGTCCAGTGCCTCATTGTTGGGGAGAGAATTGGAT | + |
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Preference number: 3 (lower is better) Translates to: KPCNCLWYHKNG*SSASLLGRELD Trigger: ATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTCTTGTGATACCACAGGCAGTTGCAAGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| 3UTR TCA 72 bp | ACAAGGTACAGAAAGAGGGAAAGCTCACAGGCTCTCTaGAGGGTTTTCTCATTTGGTGGTGACACAGAAGCT | + |
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Preference number: 3 (lower is better) Translates to: TRYRKRESSQAL*RVFSFGGDTEA Trigger: AGCTTCTGTGTCACCACCAAATGAGAAAACCCTTCAGAGAGCCTGTGAGCTTTCCCTCTTTCTGTACCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
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| 3UTR TCA 72 bp | GGGAACAGCTCTGGGTATCAGGAGTTTATTGACAGATaGCCTGCTACTGGGAACATGAACATGACCAGTTGT | + |
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Preference number: 3 (lower is better) Translates to: GNSSGYQEFIDR*PATGNMNMTSC Trigger: ACAACTGGTCATGTTCATGTTCCCAGTAGCAGGTCATCTGTCAATAAACTCCTGATACCCAGAGCTGTTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
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| 3UTR GCA 72 bp | CCCCTACAGGAATGGCAGGGAGGATTTTTATACCTCTaGATTTCTTCTAGAAGACCCTTTCAGCAGTCTGCA | + |
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Preference number: 3 (lower is better) Translates to: PLQEWQGGFLYL*ISSRRPFQQSA Trigger: TGCAGACTGCTGAAAGGGTCTTCTAGAAGAAATGCAGAGGTATAAAAATCCTCCCTGCCATTCCTGTAGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
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| 3UTR GCA 72 bp | GGATCTTCTCTGAAGTTGTCAGCAGGCTTGTCACTCTaGATTTCTTCTAGAAGACCCTTTCAGCAGTCTGCA | + |
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Preference number: 3 (lower is better) Translates to: GSSLKLSAGLSL*ISSRRPFQQSA Trigger: TGCAGACTGCTGAAAGGGTCTTCTAGAAGAAATGCAGAGTGACAAGCCTGCTGACAACTTCAGAGAAGATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186659.7 |
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| 3UTR-3UTR CAA 90 bp | CCTGTGGTATCACAAGAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGAATTGCAGTCTGCAGGCATTaGATGAATGATTTGAGAGAT | + |
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Preference number: 3 (lower is better) Translates to: PVVSQEWVIQCLIVGERIAVCRH*MNDLRD Trigger: ATCTCTCAAATCATTCATCAAATGCCTGCAGACTGC...AATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTCTTGTGATACCACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| 3UTR-3UTR CAA 90 bp | AACCTTAACTCATGTGGCAGGTCTAAGGTGGGAAAACTGGGTTGCAGTGAAAACGCAGTCTGCAGGCATTaGATGAATGATTTGAGAGAT | + |
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Preference number: 3 (lower is better) Translates to: NLNSCGRSKVGKLGCSENAVCRH*MNDLRD Trigger: ATCTCTCAAATCATTCATCAAATGCCTGCAGACTGC...GTTTTCACTGCAACCCAGTTTTCCCACCTTAGACCTGCCACATGAGTTAAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
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| 3UTR CCA 72 bp | GGTATCACAAGAATGGGTGATCCAGTGCCTCATTGTTaGGGAGAGAATTGGATTCAAGCAGCATCCAAAATA | + |
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Preference number: 3 (lower is better) Translates to: GITRMGDPVPHC*GENWIQAASKI Trigger: TATTTTGGATGCTGCTTGAATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTCTTGTGATACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| 3UTR TCA 72 bp | GAAGACCCTTTCAGCAGTCTGCAGGCATTTGATGAATaGTTTGAGAGATTTGTTACAGACATCAGAATGTGG | + |
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Preference number: 3 (lower is better) Translates to: EDPFSSLQAFDE*FERFVTDIRMW Trigger: CCACATTCTGATGTCTGTAACAAATCTCTCAAATCATTCATCAAATGCCTGCAGACTGCTGAAAGGGTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| 3UTR-3UTR CAA 90 bp | TTTATTTTAGATTATGAACATACAGTACCTAGAGTAGAGGGCTTTGGTTTGGCACCGGATGTTTCATTCTaGTCCAGCTTGGAGGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: FILDYEHTVPRVEGFGLAPDVSF*SSLEGK Trigger: CTTTCCCTCCAAGCTGGACAAGAATGAAACATCCGG...TGCCAAACCAAAGCCCTCTACTCTAGGTACTGTATGTTCATAATCTAAAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
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| 3UTR-3UTR CAA 90 bp | TTTATTTTAGATTATGAACATACAGTACCTAGAGTAGAGGGCTTTGGTTTGGCAGAAGGGTTTTCTCATTaGGTGGTGACACAGAAGCTG | + |
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Preference number: 3 (lower is better) Translates to: FILDYEHTVPRVEGFGLAEGFSH*VVTQKL Trigger: CAGCTTCTGTGTCACCACCAAATGAGAAAACCCTTC...TGCCAAACCAAAGCCCTCTACTCTAGGTACTGTATGTTCATAATCTAAAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
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| 3UTR-3UTR CAA 90 bp | GTTGTAGTAACTGGGATGTCTTCATCTGTTTCTTTGAGCTTAATCTCAGAACATGGTATCAGGAGTTTATaGACAGATGACCTGCTACTG | + |
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Preference number: 3 (lower is better) Translates to: VVVTGMSSSVSLSLISEHGIRSL*TDDLLL Trigger: CAGTAGCAGGTCATCTGTCAATAAACTCCTGATACC...ATGTTCTGAGATTAAGCTCAAAGAAACAGATGAAGACATCCCAGTTACTACAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
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| 3UTR CCA 72 bp | AAGGGAGATAAAAATAGAGGAGTGAGCTTTATTTTGTaGCATCACTGTCAAGGTTATCCCAGGCTACCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: KGDKNRGVSFIL*HHCQGYPRLPK Trigger: TTTAGGTAGCCTGGGATAACCTTGACAGTGATGCCACAAAATAAAGCTCACTCCTCTATTTTTATCTCCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| 3UTR TCA 72 bp | CAGTACAGCAAACAAAGGGAGATAAAAATAGAGGAGTaGGCTTTATTTTGTGGCATCACTGTCAAGGTTATC | + |
|
Preference number: 3 (lower is better) Translates to: QYSKQREIKIEE*ALFCGITVKVI Trigger: GATAACCTTGACAGTGATGCCACAAAATAAAGCTCACTCCTCTATTTTTATCTCCCTTTGTTTGCTGTACTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| 3UTR CCA 72 bp | ACCTTAACTCATGTGGCAGGTCTAAGGTGGGAAAACTaGGTTGCAGTGAAAACTAAATTGTTTCTAAATCTA | + |
|
Preference number: 3 (lower is better) Translates to: TLTHVAGLRWEN*VAVKTKLFLNL Trigger: TAGATTTAGAAACAATTTAGTTTTCACTGCAACCCAGTTTTCCCACCTTAGACCTGCCACATGAGTTAAGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| 3UTR CCA 72 bp | GGGACGGTTTTCTATAAAATAAGCTGTCACAACTGTTaGAAGTTATTCCTTCCTCACACTCATCATCATCAT | + |
|
Preference number: 3 (lower is better) Translates to: GTVFYKISCHNC*KLFLPHTHHHH Trigger: ATGATGATGATGAGTGTGAGGAAGGAATAACTTCCAACAGTTGTGACAGCTTATTTTATAGAAAACCGTCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| 3UTR TCA 72 bp | TTTCATTCTTGTCCAGCTTGGAGGGAAAGATGTCAGTaGAGTGTTTTGTTTATGCTGATGAGAACATTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: FHSCPAWRERCQ*SVLFMLMRTLV Trigger: TACTAATGTTCTCATCAGCATAAACAAAACACTTCACTGACATCTTTCCCTCCAAGCTGGACAAGAATGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| 3UTR GCA 72 bp | CTAAACAATTTGACCTCTATCCTCTTTAGCCAGAATTaGCCTTTTACTAGTCTGAAAGAATTAGAACTCACT | + |
|
Preference number: 3 (lower is better) Translates to: LNNLTSILFSQN*PFTSLKELELT Trigger: AGTGAGTTCTAATTCTTTCAGACTAGTAAAAGGGCAATTCTGGCTAAAGAGGATAGAGGTCAAATTGTTTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR CCA 90 bp | GGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCCCAGCCTCGGTGCTCAAGCCCCCTTGGCCCTGCTaGGGAGGATGGTGGTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GVFDVVVTDPSCPASVLKPPWPC*GGWWSC Trigger: ACAGGACCACCATCCTCCCCAGCAGGGCCAAGGGGG...CTTGAGCACCGAGGCTGGGCATGAGGGGTCTGTCACCACCACATCAAATACCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | CCCTCATGCCCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGCGCTGCATCTGGAGTaGCCAGCAGTGCTGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PSCPASVLKCAEALQLPVALHLE*PAVLQF Trigger: GAACTGCAGCACTGCTGGGCACTCCAGATGCAGCGC...CACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGGGCATGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | GCTTTAGGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCCCAGCCTCGGTGCCCCCTTGGCCCTGCTaGGGAGGATGGTGGTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ALGVFDVVVTDPSCPASVPPWPC*GGWWSC Trigger: ACAGGACCACCATCCTCCCCAGCAGGGCCAAGGGGG...CACCGAGGCTGGGCATGAGGGGTCTGTCACCACCACATCAAATACCCCTAAAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | GGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCCCAGCCTCGGTGCTCAAGTGCTGCTTGAGCCGGTaGAGCTCGGCAGCGAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: GVFDVVVTDPSCPASVLKCCLSR*SSAANV Trigger: CACATTCGCTGCCGAGCTGCACCGGCTCAAGCAGCA...CTTGAGCACCGAGGCTGGGCATGAGGGGTCTGTCACCACCACATCAAATACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | GGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCCCAGCCTCGGTGCTCAAGCTGAAGAGTGGCTGCTaGTTGAGCCGGTGCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GVFDVVVTDPSCPASVLKLKSGC*LSRCSS Trigger: CGAGCTGCACCGGCTCAAGCAGCAGCCACTCTTCAG...CTTGAGCACCGAGGCTGGGCATGAGGGGTCTGTCACCACCACATCAAATACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | GGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCCCAGCCTCGGTGCTCAAGCCCTGCTGGGGAGGATaGTGGTCCTGTTGCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: GVFDVVVTDPSCPASVLKPCWGG*WSCCCT Trigger: TGTGCAGCAACAGGACCACCATCCTCCCCAGCAGGG...CTTGAGCACCGAGGCTGGGCATGAGGGGTCTGTCACCACCACATCAAATACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | GCTTTAGGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCCCAGCCTCGGTGCCCTGCTGGGGAGGATaGTGGTCCTGTTGCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: ALGVFDVVVTDPSCPASVPCWGG*WSCCCT Trigger: TGTGCAGCAACAGGACCACCATCCTCCCCAGCAGGG...CACCGAGGCTGGGCATGAGGGGTCTGTCACCACCACATCAAATACCCCTAAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | GTGACAGACCCCTCATGCCCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTTGCAAACCCTCAGCGAAAACTaGTTCAGAGATGGGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VTDPSCPASVLKCAEALQTLSEN*FRDGAS Trigger: GCTGGCCCCATCTCTGAAGCAGTTTTCGCTGAGGGT...TTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGGGCATGAGGGGTCTGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | CCCTCATGCCCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGGTGCTCAGCCACAGTaGTACGAATCCGATCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: PSCPASVLKCAEALQLPVGAQPQ*YESDLP Trigger: TGGTAGATCGGATTCGTAGCACTGTGGCTGAGCACC...CACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGGGCATGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | CTGAGGCCCGGATGTTTCATTCTTGTCCAGCTTGGAGGGAAAGATGTCAGTGAAAGTCCCCCTTGGCCCTaGTGGGGAGGATGGTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRPGCFILVQLGGKDVSESPPWP*WGGWWS Trigger: GGACCACCATCCTCCCCAGCAGGGCCAAGGGGGACT...TTCACTGACATCTTTCCCTCCAAGCTGGACAAGAATGAAACATCCGGGCCTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR GCA 90 bp | CGGTGCTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGTATCACAAGAATGGGTGCTGCTTGAGCCGGTaGAGCTCGGCAGCGAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: RCSSVLKPCNCLWYHKNGCCLSR*SSAANV Trigger: CACATTCGCTGCCGAGCTGCACCGGCTCAAGCAGCA...CCCATTCTTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | CCCTCATGCCCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGATTAGCTTCCAGAGGTaGTCAGCCACAGTGCTACGA | + |
|
Preference number: 4 (lower is better) Translates to: PSCPASVLKCAEALQLPVISFQR*SATVLR Trigger: TCGTAGCACTGTGGCTGAGCACCTCTGGAAGCTAAT...CACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGGGCATGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | CCCTCATGCCCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGATTGGGCCAGCAGATTaGTTAGGAAGTGGTCGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSCPASVLKCAEALQLPVIGPAD*LGSGRV Trigger: CACACGACCACTTCCTAAGCAATCTGCTGGCCCAAT...CACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGGGCATGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | GCTTTAGGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCCCAGCCTCGGTGTGCTGCAGTTCAGCTTaGACACGGCGCACACTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ALGVFDVVVTDPSCPASVCCSSA*TRRTLS Trigger: ACTGAGTGTGCGCCGTGTCCAAGCTGAACTGCAGCA...CACCGAGGCTGGGCATGAGGGGTCTGTCACCACCACATCAAATACCCCTAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | CCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGTATCACAATCCGCTTGTTCCAGGTaGAAATGGACCCTGGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: PASVLKCAEALQLPVVSQSACSR*KWTLGT Trigger: GGTACCCAGGGTCCATTTTCACCTGGAACAAGCGGA...TTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | GTCAGCAGAGGGATATCAGACCCCAGTTCCCCTACAGGAATGGCAGGGAGGATTTCCGCTTGTTCCAGGTaGAAATGGACCCTGGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: VSRGISDPSSPTGMAGRISACSR*KWTLGT Trigger: GGTACCCAGGGTCCATTTTCACCTGGAACAAGCGGA...AATCCTCCCTGCCATTCCTGTAGGGGAACTGGGGTCTGATATCCCTCTGCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR GCA 90 bp | GGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCCCAGCCTCGGTGCTCAAGATTAGCTTCCAGAGGTaGTCAGCCACAGTGCTACGA | + |
|
Preference number: 4 (lower is better) Translates to: GVFDVVVTDPSCPASVLKISFQR*SATVLR Trigger: TCGTAGCACTGTGGCTGAGCACCTCTGGAAGCTAAT...CTTGAGCACCGAGGCTGGGCATGAGGGGTCTGTCACCACCACATCAAATACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | CAGGCTTGTCACTCTGCATTTCTTCTAGAAGACCCTTTCAGCAGTCTGCAGGCAAGCCCTTCACGAGAATaGTCAGCTGGGCCGCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QACHSAFLLEDPFSSLQASPSRE*SAGPLR Trigger: GCGGAGCGGCCCAGCTGAGCATTCTCGTGAAGGGCT...TGCCTGCAGACTGCTGAAAGGGTCTTCTAGAAGAAATGCAGAGTGACAAGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | ACTGCCTGTGGTATCACAAGAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGCCCTGCTGGGGAGGATaGTGGTCCTGTTGCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: TACGITRMGDPVPHCWGEPCWGG*WSCCCT Trigger: TGTGCAGCAACAGGACCACCATCCTCCCCAGCAGGG...CTCTCCCCAACAATGAGGCACTGGATCACCCATTCTTGTGATACCACAGGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | AGAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGAATTGGATTCAAGCAGCACCCCCTTGGCCCTGCTaGGGAGGATGGTGGTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RMGDPVPHCWGENWIQAAPPWPC*GGWWSC Trigger: ACAGGACCACCATCCTCCCCAGCAGGGCCAAGGGGG...TGCTGCTTGAATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | CGGTGCTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGTATCACAAGAATGGGTGTTTGCGCTGCATCTaGAGTGCCCAGCAGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RCSSVLKPCNCLWYHKNGCLRCI*SAQQCC Trigger: GCAGCACTGCTGGGCACTCCAGATGCAGCGCAAACA...CCCATTCTTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | GCTTTAGGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCCCAGCCTCGGTGCTTCTCTTGGCTGGGTaGCATCTTTGTGGTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALGVFDVVVTDPSCPASVLLLAG*HLCGPS Trigger: GGAAGGACCACAAAGATGCCACCCAGCCAAGAGAAG...CACCGAGGCTGGGCATGAGGGGTCTGTCACCACCACATCAAATACCCCTAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | GTGACAGACCCCTCATGCCCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTTGCAAAGAAGGCACTTCTCTTaGCTGGGTGGCATCTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VTDPSCPASVLKCAEALQRRHFS*LGGIFV Trigger: CACAAAGATGCCACCCAGCCAAGAGAAGTGCCTTCT...TTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGGGCATGAGGGGTCTGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | GCTTTAGGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCCCAGCCTCGGTGATACGGCTGCAAAACTaGATCCAGCCCTGTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALGVFDVVVTDPSCPASVIRLQN*IQPCAE Trigger: TTCTGCACAGGGCTGGATTCAGTTTTGCAGCCGTAT...CACCGAGGCTGGGCATGAGGGGTCTGTCACCACCACATCAAATACCCCTAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | CCTCATGCCCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGTTGTGTGCTGACTGTTaGAAGGCCACATTCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: PHAQPRCSSVLKPCNCLWLCADC*KATFTS Trigger: TGATGTGAATGTGGCCTTTCAACAGTCAGCACACAA...CCACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGGGCATGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | GTGACAGACCCCTCATGCCCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTTGCAACAACACCTTGTGTGCTaGCTGTTGAAAGGCCACATT | + |
|
Preference number: 4 (lower is better) Translates to: VTDPSCPASVLKCAEALQQHLVC*LLKGHI Trigger: AATGTGGCCTTTCAACAGTCAGCACACAAGGTGTTG...TTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGGGCATGAGGGGTCTGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | CCTCATGCCCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGGTTCTGACTGACCAGTaGACAAAAACTGTGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PHAQPRCSSVLKPCNCLWVLTDQ*TKTVTE Trigger: CTCTGTCACAGTTTTTGTTCACTGGTCAGTCAGAAC...CCACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGGGCATGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | GCTTTAGGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCCCAGCCTCGGTGATCGAATGTAGTCTGTaGCAAGCCGGCAGAGTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: ALGVFDVVVTDPSCPASVIECSL*QAGRVD Trigger: ATCGACTCTGCCGGCTTGGCACAGACTACATTCGAT...CACCGAGGCTGGGCATGAGGGGTCTGTCACCACCACATCAAATACCCCTAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | CTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGTATCACAAGAATGGGTGATCCTGAAGAGTGGCTGCTaGTTGAGCCGGTGCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LKCAEALQLPVVSQEWVILKSGC*LSRCSS Trigger: CGAGCTGCACCGGCTCAAGCAGCAGCCACTCTTCAG...GATCACCCATTCTTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | GCTTTAGGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCCCAGCCTCGGTGATCCGATCTACCACCTaGTCAAAATCCACCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALGVFDVVVTDPSCPASVIRSTT*SKSTRL Trigger: CAGCCTGGTGGATTTTGAGCAGGTGGTAGATCGGAT...CACCGAGGCTGGGCATGAGGGGTCTGTCACCACCACATCAAATACCCCTAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | CTGAGGCCCGGATGTTTCATTCTTGTCCAGCTTGGAGGGAAAGATGTCAGTGAAGCGCTGCATCTGGAGTaGCCAGCAGTGCTGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LRPGCFILVQLGGKDVSEALHLE*PAVLQF Trigger: GAACTGCAGCACTGCTGGGCACTCCAGATGCAGCGC...TTCACTGACATCTTTCCCTCCAAGCTGGACAAGAATGAAACATCCGGGCCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCTCACAGGCTCTCTGAAGGGTTTTCTCATTTGGTGGTGACACAGAAGCTGAGCCCTTCACGAGAATaGTCAGCTGGGCCGCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: KAHRLSEGFSHLVVTQKLSPSRE*SAGPLR Trigger: GCGGAGCGGCCCAGCTGAGCATTCTCGTGAAGGGCT...CAGCTTCTGTGTCACCACCAAATGAGAAAACCCTTCAGAGAGCCTGTGAGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCATGCCCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGACTGGGGTGAAGAAATaGAAAATCCTGGGAAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSCPASVLKCAEALQLPVTGVKK*KILGNL Trigger: CAGGTTTCCCAGGATTTTCCATTTCTTCACCCCAGT...CACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGGGCATGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | CCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGTATCACAAGTGTCAATGAAGGCCTaGAACAGTTCTCCTCGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PASVLKCAEALQLPVVSQVSMKA*NSSPRP Trigger: GGGACGAGGAGAACTGTTCCAGGCCTTCATTGACAC...TTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | GGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCCCAGCCTCGGTGCTCAAGAGATTGCTTAGGAAGTaGTCGTGTGCCAATCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: GVFDVVVTDPSCPASVLKRLLRK*SCANRM Trigger: CATCCGATTGGCACACGACCACTTCCTAAGCAATCT...CTTGAGCACCGAGGCTGGGCATGAGGGGTCTGTCACCACCACATCAAATACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | GGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCCCAGCCTCGGTGCTCAAGAAGAACTCTTCATGCTaGTCCAAAAGGAGTCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: GVFDVVVTDPSCPASVLKKNSSC*SKRSPC Trigger: GCATGGACTCCTTTTGGATCAGCATGAAGAGTTCTT...CTTGAGCACCGAGGCTGGGCATGAGGGGTCTGTCACCACCACATCAAATACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | GTGACAGACCCCTCATGCCCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTTGCAAGACCTAGGTTCTGACTaGCCAGTGAACAAAAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: VTDPSCPASVLKCAEALQDLGSD*PVNKNC Trigger: ACAGTTTTTGTTCACTGGTCAGTCAGAACCTAGGTC...TTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGGGCATGAGGGGTCTGTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | GCTTTAGGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCCCAGCCTCGGTGAATCTTGAACAGGAGTaGAGACTGGCGACTAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALGVFDVVVTDPSCPASVNLEQE*RLATKA Trigger: GGCTTTAGTCGCCAGTCTTCACTCCTGTTCAAGATT...CACCGAGGCTGGGCATGAGGGGTCTGTCACCACCACATCAAATACCCCTAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | GGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCCCAGCCTCGGTGCTCAAGTCTGAGTTGATCTGGTaGTTCCGAACACTGGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GVFDVVVTDPSCPASVLKSELIW*FRTLER Trigger: TCTTTCCAGTGTTCGGAATCACCAGATCAACTCAGA...CTTGAGCACCGAGGCTGGGCATGAGGGGTCTGTCACCACCACATCAAATACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | CCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGTATCACAAATCGAATGTAGTCTGTaGCAAGCCGGCAGAGTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: PASVLKCAEALQLPVVSQIECSL*QAGRVD Trigger: ATCGACTCTGCCGGCTTGGCACAGACTACATTCGAT...TTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | CCTGTGGTATCACAAGAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGAATTGCGCTGCATCTGGAGTaGCCAGCAGTGCTGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PVVSQEWVIQCLIVGERIALHLE*PAVLQF Trigger: GAACTGCAGCACTGCTGGGCACTCCAGATGCAGCGC...AATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTCTTGTGATACCACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | GGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCCCAGCCTCGGTGCTCAAGTGTTACTGCAGTGGGTaGTGTTTTCAACATGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GVFDVVVTDPSCPASVLKCYCSG*CFQHVL Trigger: CAGCACATGTTGAAAACACCACCCACTGCAGTAACA...CTTGAGCACCGAGGCTGGGCATGAGGGGTCTGTCACCACCACATCAAATACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | GCTTTAGGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCCCAGCCTCGGTGAGATTGCTTAGGAAGTaGTCGTGTGCCAATCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: ALGVFDVVVTDPSCPASVRLLRK*SCANRM Trigger: CATCCGATTGGCACACGACCACTTCCTAAGCAATCT...CACCGAGGCTGGGCATGAGGGGTCTGTCACCACCACATCAAATACCCCTAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | CCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGTATCACAACACTGGAAAGAATCTTaGACAGGAGTGAAGACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PASVLKCAEALQLPVVSQHWKES*TGVKTG Trigger: GCCAGTCTTCACTCCTGTTCAAGATTCTTTCCAGTG...TTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | ACTGCCTGTGGTATCACAAGAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGAAATCCTGGGAAACCTaGAGGCCACTCCGCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TACGITRMGDPVPHCWGEKSWET*RPLRLF Trigger: GAACAAGCGGAGTGGCCTGCAGGTTTCCCAGGATTT...CTCTCCCCAACAATGAGGCACTGGATCACCCATTCTTGTGATACCACAGGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | AGAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGAATTGGATTCAAGCAGCACTGTCAGGCCTCCAATaGCCAGGTCCTCCTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: RMGDPVPHCWGENWIQAALSGLQ*PGPPHP Trigger: AGGATGAGGAGGACCTGGGCATTGGAGGCCTGACAG...TGCTGCTTGAATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | GCTAAACTGAGTGTCCCTCCCTCATTCACTTCCCCTACTTTTTACAGACATTGCAGGCTGAAGAGTGGCTaGTGCTTGAGCCGGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AKLSVPPSFTSPTFYRHCRLKSG*CLSRCS Trigger: GCTGCACCGGCTCAAGCAGCAGCCACTCTTCAGCCT...GCAATGTCTGTAAAAAGTAGGGGAAGTGAATGAGGGAGGGACACTCAGTTTAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | TTGTCAGCAGGCTTGTCACTCTGCATTTCTTCTAGAAGACCCTTTCAGCAGTCTCACCAGGCTGAAGAGTaGCTGCTGCTTGAGCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSAGLSLCISSRRPFQQSHQAEE*LLLEPV Trigger: CACCGGCTCAAGCAGCAGCCACTCTTCAGCCTGGTG...AGACTGCTGAAAGGGTCTTCTAGAAGAAATGCAGAGTGACAAGCCTGCTGACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | ACTGCCTGTGGTATCACAAGAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGGTGTCAATGAAGGCCTaGAACAGTTCTCCTCGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TACGITRMGDPVPHCWGEVSMKA*NSSPRP Trigger: GGGACGAGGAGAACTGTTCCAGGCCTTCATTGACAC...CTCTCCCCAACAATGAGGCACTGGATCACCCATTCTTGTGATACCACAGGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | GCTTTAGGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCCCAGCCTCGGTGTGTTACTGCAGTGGGTaGTGTTTTCAACATGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALGVFDVVVTDPSCPASVCYCSG*CFQHVL Trigger: CAGCACATGTTGAAAACACCACCCACTGCAGTAACA...CACCGAGGCTGGGCATGAGGGGTCTGTCACCACCACATCAAATACCCCTAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | CTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGTATCACAAGAATGGGTGATCTGCTGCAGTTCAGCTTaGACACGGCGCACACTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LKCAEALQLPVVSQEWVICCSSA*TRRTLS Trigger: ACTGAGTGTGCGCCGTGTCCAAGCTGAACTGCAGCA...GATCACCCATTCTTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | CGGTGCTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGTATCACAAGAATGGGATGCAGCATCCAGGCTaGGAGCTGTTTATACATGAC | + |
|
Preference number: 4 (lower is better) Translates to: RCSSVLKPCNCLWYHKNGMQHPG*ELFIHD Trigger: GTCATGTATAAACAGCTCTCAGCCTGGATGCTGCAT...CCCATTCTTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | CTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGTATCACAAGAATGGGTGATCGCTGAGCTGTGTCAATaGAGGCCTGGAACAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LKCAEALQLPVVSQEWVIAELCQ*RPGTVL Trigger: GAGAACTGTTCCAGGCCTTCATTGACACAGCTCAGC...GATCACCCATTCTTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | CTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGTATCACAAGAATGGGTGATCCTGATGAAGCAGCTGTaGGAACTGAGACTCCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LKCAEALQLPVVSQEWVILMKQL*ELRLQH Trigger: GTGCTGGAGTCTCAGTTCTCACAGCTGCTTCATCAG...GATCACCCATTCTTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | CTGAGGCCCGGATGTTTCATTCTTGTCCAGCTTGGAGGGAAAGATGTCAGTGAAGCTTGGCGATACGGCTaGAAAACTGAATCCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRPGCFILVQLGGKDVSEAWRYG*KTESSP Trigger: AGGGCTGGATTCAGTTTTGCAGCCGTATCGCCAAGC...TTCACTGACATCTTTCCCTCCAAGCTGGACAAGAATGAAACATCCGGGCCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCTCACAGGCTCTCTGAAGGGTTTTCTCATTTGGTGGTGACACAGAAGCTGACCCTCAGCGAAAACTaGTTCAGAGATGGGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KAHRLSEGFSHLVVTQKLTLSEN*FRDGAS Trigger: GCTGGCCCCATCTCTGAAGCAGTTTTCGCTGAGGGT...CAGCTTCTGTGTCACCACCAAATGAGAAAACCCTTCAGAGAGCCTGTGAGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR GCA 90 bp | GAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGAATTGGATTCAAGCAGCATACCCTCAGCGAAAACTaGTTCAGAGATGGGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EWVIQCLIVGERIGFKQHTLSEN*FRDGAS Trigger: GCTGGCCCCATCTCTGAAGCAGTTTTCGCTGAGGGT...ATGCTGCTTGAATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | CTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGTATCACAAGAATGGGTGATCGGTGCTCAGCCACAGTaGTACGAATCCGATCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: LKCAEALQLPVVSQEWVIGAQPQ*YESDLP Trigger: TGGTAGATCGGATTCGTAGCACTGTGGCTGAGCACC...GATCACCCATTCTTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | CCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGTATCACAAAAACTGCTTCAGAGATaGGGCCAGCATATTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PASVLKCAEALQLPVVSQKLLQR*GQHILF Trigger: GAAGAGAATATGCTGGCCCCATCTCTGAAGCAGTTT...TTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | ACTGCCTGTGGTATCACAAGAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGCTAGTCTCACTGGGGTaGAGAAATGGAAAATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TACGITRMGDPVPHCWGELVSLG*RNGKSW Trigger: CCAGGATTTTCCATTTCTTCACCCCAGTGAGACTAG...CTCTCCCCAACAATGAGGCACTGGATCACCCATTCTTGTGATACCACAGGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | ACTGCCTGTGGTATCACAAGAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGGGAGTAATTGACATGTaGTATGGAGAGATGCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TACGITRMGDPVPHCWGEGVIDM*YGEMRV Trigger: GACCCGCATCTCTCCATATCACATGTCAATTACTCC...CTCTCCCCAACAATGAGGCACTGGATCACCCATTCTTGTGATACCACAGGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| CDS-3UTR TCA 90 bp | GTGACAGACCCCTCATGCCCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTTGCAAGTCAGGTTCACATTTTaGTTCTCAAACATTTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: VTDPSCPASVLKCAEALQVRFTF*FSNIWT Trigger: TGTCCAAATGTTTGAGAATCAAAATGTGAACCTGAC...TTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGGGCATGAGGGGTCTGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | AAAGCTCACAGGCTCTCTGAAGGGTTTTCTCATTTGGTGGTGACACAGAAGCTGGCTGAGCTGTGTCAATaGAGGCCTGGAACAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KAHRLSEGFSHLVVTQKLAELCQ*RPGTVL Trigger: GAGAACTGTTCCAGGCCTTCATTGACACAGCTCAGC...CAGCTTCTGTGTCACCACCAAATGAGAAAACCCTTCAGAGAGCCTGTGAGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR TCA 90 bp | ACTGCCTGTGGTATCACAAGAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGGAGCCAAATCTGAGTTaGTCTGGTGATTCCGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: TACGITRMGDPVPHCWGEEPNLS*SGDSEH Trigger: GTGTTCGGAATCACCAGATCAACTCAGATTTGGCTC...CTCTCCCCAACAATGAGGCACTGGATCACCCATTCTTGTGATACCACAGGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | ACTGCCTGTGGTATCACAAGAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGTTCCAAATCAAGCAGTaGTTGGCGATACGGCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TACGITRMGDPVPHCWGEFQIKQ*LAIRLQ Trigger: TTGCAGCCGTATCGCCAAGCACTGCTTGATTTGGAA...CTCTCCCCAACAATGAGGCACTGGATCACCCATTCTTGTGATACCACAGGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | CTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGTATCACAAGAATGGGTGATCTGTGATATGGAGAGATaGGGGTCAGCCAGGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKCAEALQLPVVSQEWVICDMER*GSARNS Trigger: AGAGTTCCTGGCTGACCCGCATCTCTCCATATCACA...GATCACCCATTCTTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | ATAGGAGCTAAACTGAGTGTCCCTCCCTCATTCACTTCCCCTACTTTTTACAGACTGTCAGGCCTCCAATaGCCAGGTCCTCCTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: IGAKLSVPPSFTSPTFYRLSGLQ*PGPPHP Trigger: AGGATGAGGAGGACCTGGGCATTGGAGGCCTGACAG...TCTGTAAAAAGTAGGGGAAGTGAATGAGGGAGGGACACTCAGTTTAGCTCCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | ATAGGATCTTCTCTGAAGTTGTCAGCAGGCTTGTCACTCTGCATTTCTTCTAGAAGGCTGAAGAGTGGCTaGTGCTTGAGCCGGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IGSSLKLSAGLSLCISSRRLKSG*CLSRCS Trigger: GCTGCACCGGCTCAAGCAGCAGCCACTCTTCAGCCT...TCTAGAAGAAATGCAGAGTGACAAGCCTGCTGACAACTTCAGAGAAGATCCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | CTGAGGCCCGGATGTTTCATTCTTGTCCAGCTTGGAGGGAAAGATGTCAGTGAAGGGGTGAAGAGAATGTaGAGTGGCCACTGTACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LRPGCFILVQLGGKDVSEGVKRM*SGHCTL Trigger: CAAAGTACAGTGGCCACTGCACATTCTCTTCACCCC...TTCACTGACATCTTTCCCTCCAAGCTGGACAAGAATGAAACATCCGGGCCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR CCA 90 bp | TTGTCAGCAGGCTTGTCACTCTGCATTTCTTCTAGAAGACCCTTTCAGCAGTCTGGTGAAAATGGACCCTaGGTACCCACTCAGGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSAGLSLCISSRRPFQQSGENGP*VPTQGQ Trigger: TTGGCCCTGAGTGGGTACCCAGGGTCCATTTTCACC...AGACTGCTGAAAGGGTCTTCTAGAAGAAATGCAGAGTGACAAGCCTGCTGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | CGGTGCTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGTATCACAAGAATGGGGAAGAGAATGTGCAGTaGCCACTGTACTTTGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RCSSVLKPCNCLWYHKNGEENVQ*PLYFVG Trigger: TCCTACAAAGTACAGTGGCCACTGCACATTCTCTTC...CCCATTCTTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | GCTAAACTGAGTGTCCCTCCCTCATTCACTTCCCCTACTTTTTACAGACATTGCTGCTGCAGTTCAGCTTaGACACGGCGCACACTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AKLSVPPSFTSPTFYRHCCCSSA*TRRTLS Trigger: ACTGAGTGTGCGCCGTGTCCAAGCTGAACTGCAGCA...GCAATGTCTGTAAAAAGTAGGGGAAGTGAATGAGGGAGGGACACTCAGTTTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | AAAACCTTAACTCATGTGGCAGGTCTAAGGTGGGAAAACTGGGTTGCAGTGAAATGTTTGCGCTGCATCTaGAGTGCCCAGCAGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KTLTHVAGLRWENWVAVKCLRCI*SAQQCC Trigger: GCAGCACTGCTGGGCACTCCAGATGCAGCGCAAACA...TTTCACTGCAACCCAGTTTTCCCACCTTAGACCTGCCACATGAGTTAAGGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR CCA 90 bp | CACTCTGCATTTCTTCTAGAAGACCCTTTCAGCAGTCTGCAGGCATTTGATGAATGTTTGCGCTGCATCTaGAGTGCCCAGCAGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HSAFLLEDPFSSLQAFDECLRCI*SAQQCC Trigger: GCAGCACTGCTGGGCACTCCAGATGCAGCGCAAACA...TTCATCAAATGCCTGCAGACTGCTGAAAGGGTCTTCTAGAAGAAATGCAGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | CTGAGGCCCGGATGTTTCATTCTTGTCCAGCTTGGAGGGAAAGATGTCAGTGAAATGCAGCATCCAGGCTaGGAGCTGTTTATACATGAC | + |
|
Preference number: 4 (lower is better) Translates to: LRPGCFILVQLGGKDVSEMQHPG*ELFIHD Trigger: GTCATGTATAAACAGCTCTCAGCCTGGATGCTGCAT...TTCACTGACATCTTTCCCTCCAAGCTGGACAAGAATGAAACATCCGGGCCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR TCA 90 bp | CTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGTATCACAAGAATGGGTGATCGTTTTCAACATGTGCTaGGCTGTGTCAATGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LKCAEALQLPVVSQEWVIVFNMC*AVSMKA Trigger: GGCCTTCATTGACACAGCTCAGCACATGTTGAAAAC...GATCACCCATTCTTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | TCTTCTCTGAAGTTGTCAGCAGGCTTGTCACTCTGCATTTCTTCTAGAAGACCCAGCAGCTGTGAGAACTaGGACTCCAGCACATCTACC | + |
|
Preference number: 4 (lower is better) Translates to: SSLKLSAGLSLCISSRRPSSCEN*DSSTST Trigger: GGTAGATGTGCTGGAGTCTCAGTTCTCACAGCTGCT...GGGTCTTCTAGAAGAAATGCAGAGTGACAAGCCTGCTGACAACTTCAGAGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | GCTAAACTGAGTGTCCCTCCCTCATTCACTTCCCCTACTTTTTACAGACATTGCCTGATGAAGCAGCTGTaGGAACTGAGACTCCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AKLSVPPSFTSPTFYRHCLMKQL*ELRLQH Trigger: GTGCTGGAGTCTCAGTTCTCACAGCTGCTTCATCAG...GCAATGTCTGTAAAAAGTAGGGGAAGTGAATGAGGGAGGGACACTCAGTTTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | GCTAAACTGAGTGTCCCTCCCTCATTCACTTCCCCTACTTTTTACAGACATTGCAAATCCTGGGAAACCTaGAGGCCACTCCGCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AKLSVPPSFTSPTFYRHCKSWET*RPLRLF Trigger: GAACAAGCGGAGTGGCCTGCAGGTTTCCCAGGATTT...GCAATGTCTGTAAAAAGTAGGGGAAGTGAATGAGGGAGGGACACTCAGTTTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | TTTACAGACATTGCTTTAGGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCGCTTGGCGATACGGCTaGAAAACTGAATCCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FTDIALGVFDVVVTDPSCAWRYG*KTESSP Trigger: AGGGCTGGATTCAGTTTTGCAGCCGTATCGCCAAGC...GCATGAGGGGTCTGTCACCACCACATCAAATACCCCTAAAGCAATGTCTGTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | TTTACAGACATTGCTTTAGGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCGGTGCTCAGCCACAGTaGTACGAATCCGATCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: FTDIALGVFDVVVTDPSCGAQPQ*YESDLP Trigger: TGGTAGATCGGATTCGTAGCACTGTGGCTGAGCACC...GCATGAGGGGTCTGTCACCACCACATCAAATACCCCTAAAGCAATGTCTGTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | AAAGCTCACAGGCTCTCTGAAGGGTTTTCTCATTTGGTGGTGACACAGAAGCTGATTAGCTTCCAGAGGTaGTCAGCCACAGTGCTACGA | + |
|
Preference number: 4 (lower is better) Translates to: KAHRLSEGFSHLVVTQKLISFQR*SATVLR Trigger: TCGTAGCACTGTGGCTGAGCACCTCTGGAAGCTAAT...CAGCTTCTGTGTCACCACCAAATGAGAAAACCCTTCAGAGAGCCTGTGAGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR GCA 90 bp | CTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGTATCACAAGAATGGGTGATCTACTCAATCGTCAGGTaGAACAGAGGGAGAAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LKCAEALQLPVVSQEWVIYSIVR*NRGRRL Trigger: CAACCTTCTCCCTCTGTTGCACCTGACGATTGAGTA...GATCACCCATTCTTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | GAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGAATTGGATTCAAGCAGCATGGGGTGAAGAGAATGTaGAGTGGCCACTGTACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: EWVIQCLIVGERIGFKQHGVKRM*SGHCTL Trigger: CAAAGTACAGTGGCCACTGCACATTCTCTTCACCCC...ATGCTGCTTGAATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | ATAGGAGCTAAACTGAGTGTCCCTCCCTCATTCACTTCCCCTACTTTTTACAGAGGTGAAAATGGACCCTaGGTACCCACTCAGGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: IGAKLSVPPSFTSPTFYRGENGP*VPTQGQ Trigger: TTGGCCCTGAGTGGGTACCCAGGGTCCATTTTCACC...TCTGTAAAAAGTAGGGGAAGTGAATGAGGGAGGGACACTCAGTTTAGCTCCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | CCTGTGGTATCACAAGAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGAATTAACAGGAGTGAAGACTaGCGACTAAAGCCCTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: PVVSQEWVIQCLIVGERINRSED*RLKPFT Trigger: CGTGAAGGGCTTTAGTCGCCAGTCTTCACTCCTGTT...AATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTCTTGTGATACCACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | ATAGGAGCTAAACTGAGTGTCCCTCCCTCATTCACTTCCCCTACTTTTTACAGAGGCACTTCTCTTGGCTaGGTGGCATCTTTGTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: IGAKLSVPPSFTSPTFYRGTSLG*VASLWS Trigger: GGACCACAAAGATGCCACCCAGCCAAGAGAAGTGCC...TCTGTAAAAAGTAGGGGAAGTGAATGAGGGAGGGACACTCAGTTTAGCTCCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | CCTGTGGTATCACAAGAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGAATTATGCAGCATCCAGGCTaGGAGCTGTTTATACATGAC | + |
|
Preference number: 4 (lower is better) Translates to: PVVSQEWVIQCLIVGERIMQHPG*ELFIHD Trigger: GTCATGTATAAACAGCTCTCAGCCTGGATGCTGCAT...AATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTCTTGTGATACCACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | CCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGTATCACAAGTCAGGTTCACATTTTaGTTCTCAAACATTTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PASVLKCAEALQLPVVSQVRFTF*FSNIWT Trigger: TGTCCAAATGTTTGAGAATCAAAATGTGAACCTGAC...TTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | TCCTCACACTCATCATCATCATCCCTGTTAGCGAACGGCTTCTCATTCTCTAAAAGCAGCTGTGAGAACTaGGACTCCAGCACATCTACC | + |
|
Preference number: 4 (lower is better) Translates to: SSHSSSSSLLANGFSFSKSSCEN*DSSTST Trigger: GGTAGATGTGCTGGAGTCTCAGTTCTCACAGCTGCT...TTTAGAGAATGAGAAGCCGTTCGCTAACAGGGATGATGATGATGAGTGTGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR TCA 90 bp | CACTCTGCATTTCTTCTAGAAGACCCTTTCAGCAGTCTGCAGGCATTTGATGAACTGATGAAGCAGCTGTaGGAACTGAGACTCCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HSAFLLEDPFSSLQAFDELMKQL*ELRLQH Trigger: GTGCTGGAGTCTCAGTTCTCACAGCTGCTTCATCAG...TTCATCAAATGCCTGCAGACTGCTGAAAGGGTCTTCTAGAAGAAATGCAGAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | CTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGTATCACAAGAATGGGTGATCGTTCTGACTGACCAGTaGACAAAAACTGTGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LKCAEALQLPVVSQEWVIVLTDQ*TKTVTE Trigger: CTCTGTCACAGTTTTTGTTCACTGGTCAGTCAGAAC...GATCACCCATTCTTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | AAAGCTCACAGGCTCTCTGAAGGGTTTTCTCATTTGGTGGTGACACAGAAGCTGAATCTTGAACAGGAGTaGAGACTGGCGACTAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KAHRLSEGFSHLVVTQKLNLEQE*RLATKA Trigger: GGCTTTAGTCGCCAGTCTTCACTCCTGTTCAAGATT...CAGCTTCTGTGTCACCACCAAATGAGAAAACCCTTCAGAGAGCCTGTGAGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR GCA 90 bp | ACCCACCCAACAGATGTCTTCAAAATCCTTCGTGTGGTCAGCAGAGGGATATCATTCCAAATCAAGCAGTaGTTGGCGATACGGCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: THPTDVFKILRVVSRGISFQIKQ*LAIRLQ Trigger: TTGCAGCCGTATCGCCAAGCACTGCTTGATTTGGAA...TGATATCCCTCTGCTGACCACACGAAGGATTTTGAAGACATCTGTTGGGTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR GCA 90 bp | AACCTTAACTCATGTGGCAGGTCTAAGGTGGGAAAACTGGGTTGCAGTGAAAACTGTGATATGGAGAGATaGGGGTCAGCCAGGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: NLNSCGRSKVGKLGCSENCDMER*GSARNS Trigger: AGAGTTCCTGGCTGACCCGCATCTCTCCATATCACA...GTTTTCACTGCAACCCAGTTTTCCCACCTTAGACCTGCCACATGAGTTAAGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR GCA 90 bp | GAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGAATTGGATTCAAGCAGCATATTAGGCGCAGGTCCTaGAGTTCTCTCAGCTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EWVIQCLIVGERIGFKQHIRRRS*SSLSCF Trigger: AAAACAGCTGAGAGAACTGCAGGACCTGCGCCTAAT...ATGCTGCTTGAATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | AGAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGAATTGGATTCAAGCAGCAATTAGGCGCAGGTCCTaGAGTTCTCTCAGCTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RMGDPVPHCWGENWIQAAIRRRS*SSLSCF Trigger: AAAACAGCTGAGAGAACTGCAGGACCTGCGCCTAAT...TGCTGCTTGAATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | AACCTTAACTCATGTGGCAGGTCTAAGGTGGGAAAACTGGGTTGCAGTGAAAACATCCGATCTACCACCTaGTCAAAATCCACCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NLNSCGRSKVGKLGCSENIRSTT*SKSTRL Trigger: CAGCCTGGTGGATTTTGAGCAGGTGGTAGATCGGAT...GTTTTCACTGCAACCCAGTTTTCCCACCTTAGACCTGCCACATGAGTTAAGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR GCA 90 bp | AGAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGAATTGGATTCAAGCAGCAGCCACATTCACATCATaGTCTGTTACTGCAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RMGDPVPHCWGENWIQAAATFTS*SVTAVG Trigger: ACCCACTGCAGTAACAGAGCATGATGTGAATGTGGC...TGCTGCTTGAATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | GTTGTAGTAACTGGGATGTCTTCATCTGTTTCTTTGAGCTTAATCTCAGAACATAGCCCTTCACGAGAATaGTCAGCTGGGCCGCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VVVTGMSSSVSLSLISEHSPSRE*SAGPLR Trigger: GCGGAGCGGCCCAGCTGAGCATTCTCGTGAAGGGCT...ATGTTCTGAGATTAAGCTCAAAGAAACAGATGAAGACATCCCAGTTACTACAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | CTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGTATCACAAGAATGGGTGATCAAATCAAGCAGTGCTTaGCGATACGGCTGCAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: LKCAEALQLPVVSQEWVIKSSSA*RYGCKT Trigger: AGTTTTGCAGCCGTATCGCCAAGCACTGCTTGATTT...GATCACCCATTCTTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | CGGTGCTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGTATCACAAGAATGGGTTATACATGACTCCATaGCACACAGCCAGGATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RCSSVLKPCNCLWYHKNGLYMTP*HTARIF Trigger: AAAAATCCTGGCTGTGTGCCATGGAGTCATGTATAA...CCCATTCTTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | CTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGTATCACAAGAATGGGTGATCAAACTGCTTCAGAGATaGGGCCAGCATATTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKCAEALQLPVVSQEWVIKLLQR*GQHILF Trigger: GAAGAGAATATGCTGGCCCCATCTCTGAAGCAGTTT...GATCACCCATTCTTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | CCTGTGGTATCACAAGAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGAATTGCGAATGTGTCCTCCTaGTTTTTCAAGATGGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: PVVSQEWVIQCLIVGERIANVSS*FFKMDP Trigger: AGGGTCCATCTTGAAAAACCAGGAGGACACATTCGC...AATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTCTTGTGATACCACAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | AAGACCCTTTCAGCAGTCTGCAGGCATTTGATGAATGATTTGAGAGATTTGTTACACCAGGCTGAAGAGTaGCTGCTGCTTGAGCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KTLSAVCRHLMNDLRDLLHQAEE*LLLEPV Trigger: CACCGGCTCAAGCAGCAGCCACTCTTCAGCCTGGTG...TAACAAATCTCTCAAATCATTCATCAAATGCCTGCAGACTGCTGAAAGGGTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | AGGATCTTCTCTGAAGTTGTCAGCAGGCTTGTCACTTTAGCAGTACAGCAAACAGTGTCAATGAAGGCCTaGAACAGTTCTCCTCGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RIFSEVVSRLVTLAVQQTVSMKA*NSSPRP Trigger: GGGACGAGGAGAACTGTTCCAGGCCTTCATTGACAC...TGTTTGCTGTACTGCTAAAGTGACAAGCCTGCTGACAACTTCAGAGAAGATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR CCA 90 bp | TTTACAGACATTGCTTTAGGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCAGAAGGCACTTCTCTTaGCTGGGTGGCATCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FTDIALGVFDVVVTDPSCRRHFS*LGGICF Trigger: AAAGCAGATGCCACCCAGCCAAGAGAAGTGCCTTCT...GCATGAGGGGTCTGTCACCACCACATCAAATACCCCTAAAGCAATGTCTGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039541.12 |
||
| CDS-3UTR CCA 90 bp | AACCTTAACTCATGTGGCAGGTCTAAGGTGGGAAAACTGGGTTGCAGTGAAAACACCAAGAAGGCCATGTaGTTTCTTAGGCGCCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: NLNSCGRSKVGKLGCSENTKKAM*FLRRHL Trigger: CAAGTGGCGCCTAAGAAACCACATGGCCTTCTTGGT...GTTTTCACTGCAACCCAGTTTTCCCACCTTAGACCTGCCACATGAGTTAAGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR CCA 90 bp | TTGTCAGCAGGCTTGTCACTCTGCATTTCTTCTAGAAGACCCTTTCAGCAGTCTACCAAGAAGGCCATGTaGTTTCTTAGGCGCCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSAGLSLCISSRRPFQQSTKKAM*FLRRHL Trigger: CAAGTGGCGCCTAAGAAACCACATGGCCTTCTTGGT...AGACTGCTGAAAGGGTCTTCTAGAAGAAATGCAGAGTGACAAGCCTGCTGACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | TCTTCTCTGAAGTTGTCAGCAGGCTTGTCACTCTGCATTTCTTCTAGAAGACCCAACAGGAGTGAAGACTaGCGACTAAAGCCCTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: SSLKLSAGLSLCISSRRPNRSED*RLKPFT Trigger: CGTGAAGGGCTTTAGTCGCCAGTCTTCACTCCTGTT...GGGTCTTCTAGAAGAAATGCAGAGTGACAAGCCTGCTGACAACTTCAGAGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | CACTCTGCATTTCTTCTAGAAGACCCTTTCAGCAGTCTGCAGGCATTTGATGAACTTCTCTTGGCTGGGTaGCATCTTTGTGGTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSAFLLEDPFSSLQAFDELLLAG*HLCGPS Trigger: GGAAGGACCACAAAGATGCCACCCAGCCAAGAGAAG...TTCATCAAATGCCTGCAGACTGCTGAAAGGGTCTTCTAGAAGAAATGCAGAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | ATAGGAGCTAAACTGAGTGTCCCTCCCTCATTCACTTCCCCTACTTTTTACAGAATACGGCTGCAAAACTaGATCCAGCCCTGTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IGAKLSVPPSFTSPTFYRIRLQN*IQPCAE Trigger: TTCTGCACAGGGCTGGATTCAGTTTTGCAGCCGTAT...TCTGTAAAAAGTAGGGGAAGTGAATGAGGGAGGGACACTCAGTTTAGCTCCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | CACTCTGCATTTCTTCTAGAAGACCCTTTCAGCAGTCTGCAGGCATTTGATGAAATACGGCTGCAAAACTaGATCCAGCCCTGTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HSAFLLEDPFSSLQAFDEIRLQN*IQPCAE Trigger: TTCTGCACAGGGCTGGATTCAGTTTTGCAGCCGTAT...TTCATCAAATGCCTGCAGACTGCTGAAAGGGTCTTCTAGAAGAAATGCAGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | AGAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGAATTGGATTCAAGCAGCATTGTGTGCTGACTGTTaGAAGGCCACATTCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: RMGDPVPHCWGENWIQAALCADC*KATFTS Trigger: TGATGTGAATGTGGCCTTTCAACAGTCAGCACACAA...TGCTGCTTGAATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | AACCTTAACTCATGTGGCAGGTCTAAGGTGGGAAAACTGGGTTGCAGTGAAAACCAACACCTTGTGTGCTaGCTGTTGAAAGGCCACATT | + |
|
Preference number: 4 (lower is better) Translates to: NLNSCGRSKVGKLGCSENQHLVC*LLKGHI Trigger: AATGTGGCCTTTCAACAGTCAGCACACAAGGTGTTG...GTTTTCACTGCAACCCAGTTTTCCCACCTTAGACCTGCCACATGAGTTAAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR TCA 90 bp | GCTAAACTGAGTGTCCCTCCCTCATTCACTTCCCCTACTTTTTACAGACATTGCCAACACCTTGTGTGCTaGCTGTTGAAAGGCCACATT | + |
|
Preference number: 4 (lower is better) Translates to: AKLSVPPSFTSPTFYRHCQHLVC*LLKGHI Trigger: AATGTGGCCTTTCAACAGTCAGCACACAAGGTGTTG...GCAATGTCTGTAAAAAGTAGGGGAAGTGAATGAGGGAGGGACACTCAGTTTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | AAAGCTCACAGGCTCTCTGAAGGGTTTTCTCATTTGGTGGTGACACAGAAGCTGGTTCTGACTGACCAGTaGACAAAAACTGTGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KAHRLSEGFSHLVVTQKLVLTDQ*TKTVTE Trigger: CTCTGTCACAGTTTTTGTTCACTGGTCAGTCAGAAC...CAGCTTCTGTGTCACCACCAAATGAGAAAACCCTTCAGAGAGCCTGTGAGCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR TCA 90 bp | AACCTTAACTCATGTGGCAGGTCTAAGGTGGGAAAACTGGGTTGCAGTGAAAACCACTGGAAAGAATCTTaGACAGGAGTGAAGACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NLNSCGRSKVGKLGCSENHWKES*TGVKTG Trigger: GCCAGTCTTCACTCCTGTTCAAGATTCTTTCCAGTG...GTTTTCACTGCAACCCAGTTTTCCCACCTTAGACCTGCCACATGAGTTAAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR GCA 90 bp | CACTCTGCATTTCTTCTAGAAGACCCTTTCAGCAGTCTGCAGGCATTTGATGAATGTGATATGGAGAGATaGGGGTCAGCCAGGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: HSAFLLEDPFSSLQAFDECDMER*GSARNS Trigger: AGAGTTCCTGGCTGACCCGCATCTCTCCATATCACA...TTCATCAAATGCCTGCAGACTGCTGAAAGGGTCTTCTAGAAGAAATGCAGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | GTTGTAGTAACTGGGATGTCTTCATCTGTTTCTTTGAGCTTAATCTCAGAACATTGCTGCTTGAGCCGGTaGAGCTCGGCAGCGAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: VVVTGMSSSVSLSLISEHCCLSR*SSAANV Trigger: CACATTCGCTGCCGAGCTGCACCGGCTCAAGCAGCA...ATGTTCTGAGATTAAGCTCAAAGAAACAGATGAAGACATCCCAGTTACTACAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | ATAGGAGCTAAACTGAGTGTCCCTCCCTCATTCACTTCCCCTACTTTTTACAGAATCCGATCTACCACCTaGTCAAAATCCACCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IGAKLSVPPSFTSPTFYRIRSTT*SKSTRL Trigger: CAGCCTGGTGGATTTTGAGCAGGTGGTAGATCGGAT...TCTGTAAAAAGTAGGGGAAGTGAATGAGGGAGGGACACTCAGTTTAGCTCCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | GCTAAACTGAGTGTCCCTCCCTCATTCACTTCCCCTACTTTTTACAGACATTGCTACTCAATCGTCAGGTaGAACAGAGGGAGAAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AKLSVPPSFTSPTFYRHCYSIVR*NRGRRL Trigger: CAACCTTCTCCCTCTGTTGCACCTGACGATTGAGTA...GCAATGTCTGTAAAAAGTAGGGGAAGTGAATGAGGGAGGGACACTCAGTTTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | ACCCACCCAACAGATGTCTTCAAAATCCTTCGTGTGGTCAGCAGAGGGATATCATCCTGTTGCTGCACATaGCCTGTATACTGTTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: THPTDVFKILRVVSRGISSCCCT*PVYCSM Trigger: CATTGAACAGTATACAGGCCATGTGCAGCAACAGGA...TGATATCCCTCTGCTGACCACACGAAGGATTTTGAAGACATCTGTTGGGTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR CCA 90 bp | CCTGTGGTATCACAAGAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGAATTGAGAGTACCAGAAGATaGGCCCTGTTTGATGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PVVSQEWVIQCLIVGERIESTRR*ALFDEE Trigger: TTCTTCATCAAACAGGGCCCATCTTCTGGTACTCTC...AATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTCTTGTGATACCACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | AGAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGAATTGGATTCAAGCAGCAAAACTGCTTCAGAGATaGGGCCAGCATATTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RMGDPVPHCWGENWIQAAKLLQR*GQHILF Trigger: GAAGAGAATATGCTGGCCCCATCTCTGAAGCAGTTT...TGCTGCTTGAATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | TTGTCAGCAGGCTTGTCACTCTGCATTTCTTCTAGAAGACCCTTTCAGCAGTCTGCGAATGTGTCCTCCTaGTTTTTCAAGATGGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSAGLSLCISSRRPFQQSANVSS*FFKMDP Trigger: AGGGTCCATCTTGAAAAACCAGGAGGACACATTCGC...AGACTGCTGAAAGGGTCTTCTAGAAGAAATGCAGAGTGACAAGCCTGCTGACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | ATAGGAGCTAAACTGAGTGTCCCTCCCTCATTCACTTCCCCTACTTTTTACAGAAACAGGAGTGAAGACTaGCGACTAAAGCCCTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: IGAKLSVPPSFTSPTFYRNRSED*RLKPFT Trigger: CGTGAAGGGCTTTAGTCGCCAGTCTTCACTCCTGTT...TCTGTAAAAAGTAGGGGAAGTGAATGAGGGAGGGACACTCAGTTTAGCTCCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | TCAGAACATGATAAACATAGGATCTTCTCTGAAGTTGTCAGCAGGCTTGTCACTGGCACTTCTCTTGGCTaGGTGGCATCTTTGTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SEHDKHRIFSEVVSRLVTGTSLG*VASLWS Trigger: GGACCACAAAGATGCCACCCAGCCAAGAGAAGTGCC...AGTGACAAGCCTGCTGACAACTTCAGAGAAGATCCTATGTTTATCATGTTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | TCCTCACACTCATCATCATCATCCCTGTTAGCGAACGGCTTCTCATTCTCTAAAGGAGTAATTGACATGTaGTATGGAGAGATGCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSHSSSSSLLANGFSFSKGVIDM*YGEMRV Trigger: GACCCGCATCTCTCCATATCACATGTCAATTACTCC...TTTAGAGAATGAGAAGCCGTTCGCTAACAGGGATGATGATGATGAGTGTGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR TCA 90 bp | AGGATCTTCTCTGAAGTTGTCAGCAGGCTTGTCACTTTAGCAGTACAGCAAACAGTTTTCAACATGTGCTaGGCTGTGTCAATGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RIFSEVVSRLVTLAVQQTVFNMC*AVSMKA Trigger: GGCCTTCATTGACACAGCTCAGCACATGTTGAAAAC...TGTTTGCTGTACTGCTAAAGTGACAAGCCTGCTGACAACTTCAGAGAAGATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR TCA 90 bp | AAAACCTTAACTCATGTGGCAGGTCTAAGGTGGGAAAACTGGGTTGCAGTGAAAGAGCCAAATCTGAGTTaGTCTGGTGATTCCGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: KTLTHVAGLRWENWVAVKEPNLS*SGDSEH Trigger: GTGTTCGGAATCACCAGATCAACTCAGATTTGGCTC...TTTCACTGCAACCCAGTTTTCCCACCTTAGACCTGCCACATGAGTTAAGGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR GCA 90 bp | GTTGTAGTAACTGGGATGTCTTCATCTGTTTCTTTGAGCTTAATCTCAGAACATCTGTCAGGCCTCCAATaGCCAGGTCCTCCTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: VVVTGMSSSVSLSLISEHLSGLQ*PGPPHP Trigger: AGGATGAGGAGGACCTGGGCATTGGAGGCCTGACAG...ATGTTCTGAGATTAAGCTCAAAGAAACAGATGAAGACATCCCAGTTACTACAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | GTAACTGGGATGTCTTCATCTGTTTCTTTGAGCTTAATCTCAGAACATGATAAACTGAAGAGTGGCTGCTaGTTGAGCCGGTGCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VTGMSSSVSLSLISEHDKLKSGC*LSRCSS Trigger: CGAGCTGCACCGGCTCAAGCAGCAGCCACTCTTCAG...TTTATCATGTTCTGAGATTAAGCTCAAAGAAACAGATGAAGACATCCCAGTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | CTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGTATCACAAGAATGGGTGATCTTATACATGACTCCATaGCACACAGCCAGGATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LKCAEALQLPVVSQEWVILYMTP*HTARIF Trigger: AAAAATCCTGGCTGTGTGCCATGGAGTCATGTATAA...GATCACCCATTCTTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | TATAAAATAAGCTGTCACAACTGTTGGAAGTTATTCCTTCCTCACACTCATCATCACCAGGCTGAAGAGTaGCTGCTGCTTGAGCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YKISCHNCWKLFLPHTHHHQAEE*LLLEPV Trigger: CACCGGCTCAAGCAGCAGCCACTCTTCAGCCTGGTG...ATGATGAGTGTGAGGAAGGAATAACTTCCAACAGTTGTGACAGCTTATTTTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAACATGATAAACATAGGATCTTCTCTGAAGTTGTCAGCAGGCTTGTCACTCTTCTCTTGGCTGGGTaGCATCTGCTTTGTGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SEHDKHRIFSEVVSRLVTLLLAG*HLLCGP Trigger: AGGACCACAAAGCAGATGCCACCCAGCCAAGAGAAG...AGTGACAAGCCTGCTGACAACTTCAGAGAAGATCCTATGTTTATCATGTTCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039541.12 |
||
| CDS-3UTR CCA 90 bp | AGGATCTTCTCTGAAGTTGTCAGCAGGCTTGTCACTTTAGCAGTACAGCAAACAAGATTGCTTAGGAAGTaGTCGTGTGCCAATCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: RIFSEVVSRLVTLAVQQTRLLRK*SCANRM Trigger: CATCCGATTGGCACACGACCACTTCCTAAGCAATCT...TGTTTGCTGTACTGCTAAAGTGACAAGCCTGCTGACAACTTCAGAGAAGATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR TCA 90 bp | GTTGTAGTAACTGGGATGTCTTCATCTGTTTCTTTGAGCTTAATCTCAGAACATTCCGCTTGTTCCAGGTaGAAATGGACCCTGGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: VVVTGMSSSVSLSLISEHSACSR*KWTLGT Trigger: GGTACCCAGGGTCCATTTTCACCTGGAACAAGCGGA...ATGTTCTGAGATTAAGCTCAAAGAAACAGATGAAGACATCCCAGTTACTACAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | TCCTCACACTCATCATCATCATCCCTGTTAGCGAACGGCTTCTCATTCTCTAAAGACCTAGGTTCTGACTaGCCAGTGAACAAAAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSHSSSSSLLANGFSFSKDLGSD*PVNKNC Trigger: ACAGTTTTTGTTCACTGGTCAGTCAGAACCTAGGTC...TTTAGAGAATGAGAAGCCGTTCGCTAACAGGGATGATGATGATGAGTGTGAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR TCA 90 bp | CACTCTGCATTTCTTCTAGAAGACCCTTTCAGCAGTCTGCAGGCATTTGATGAATCTGAGTTGATCTGGTaGTTCCGAACACTGGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HSAFLLEDPFSSLQAFDESELIW*FRTLER Trigger: TCTTTCCAGTGTTCGGAATCACCAGATCAACTCAGA...TTCATCAAATGCCTGCAGACTGCTGAAAGGGTCTTCTAGAAGAAATGCAGAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | ATAAACCCCGGTTACACAAATGAACCCACCCAACAGATGTCTTCAAAATCCTTCTTCCAAATCAAGCAGTaGTTGGCGATACGGCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: INPGYTNEPTQQMSSKSFFQIKQ*LAIRLQ Trigger: TTGCAGCCGTATCGCCAAGCACTGCTTGATTTGGAA...GAAGGATTTTGAAGACATCTGTTGGGTGGGTTCATTTGTGTAACCGGGGTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR CCA 90 bp | ATCCTCTTTAGCCAGAATTGCCCTTTTACTAGTCTGAAAGAATTAGAACTCACTGGTGAAAATGGACCCTaGGTACCCACTCAGGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ILFSQNCPFTSLKELELTGENGP*VPTQGQ Trigger: TTGGCCCTGAGTGGGTACCCAGGGTCCATTTTCACC...AGTGAGTTCTAATTCTTTCAGACTAGTAAAAGGGCAATTCTGGCTAAAGAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR CCA 90 bp | ATAGGAGCTAAACTGAGTGTCCCTCCCTCATTCACTTCCCCTACTTTTTACAGATCCTGTTGCTGCACATaGCCTGTATACTGTTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: IGAKLSVPPSFTSPTFYRSCCCT*PVYCSM Trigger: CATTGAACAGTATACAGGCCATGTGCAGCAACAGGA...TCTGTAAAAAGTAGGGGAAGTGAATGAGGGAGGGACACTCAGTTTAGCTCCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | GGATCTTCTCTGAAGTTGTCAGCAGGCTTGTCACTCTGCATTTCTTCTAGAAGATCCTGTTGCTGCACATaGCCTGTATACTGTTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: GSSLKLSAGLSLCISSRRSCCCT*PVYCSM Trigger: CATTGAACAGTATACAGGCCATGTGCAGCAACAGGA...TCTTCTAGAAGAAATGCAGAGTGACAAGCCTGCTGACAACTTCAGAGAAGATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | AGGATCTTCTCTGAAGTTGTCAGCAGGCTTGTCACTTTAGCAGTACAGCAAACAAAATCAAGCAGTGCTTaGCGATACGGCTGCAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: RIFSEVVSRLVTLAVQQTKSSSA*RYGCKT Trigger: AGTTTTGCAGCCGTATCGCCAAGCACTGCTTGATTT...TGTTTGCTGTACTGCTAAAGTGACAAGCCTGCTGACAACTTCAGAGAAGATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCACACTCATCATCATCATCCCTGTTAGCGAACGGCTTCTCATTCTCTAAAAAATCAAGCAGTGCTTaGCGATACGGCTGCAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: SSHSSSSSLLANGFSFSKKSSSA*RYGCKT Trigger: AGTTTTGCAGCCGTATCGCCAAGCACTGCTTGATTT...TTTAGAGAATGAGAAGCCGTTCGCTAACAGGGATGATGATGATGAGTGTGAGGA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR CCA 90 bp | AGAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGAATTGGATTCAAGCAGCATTATACATGACTCCATaGCACACAGCCAGGATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RMGDPVPHCWGENWIQAALYMTP*HTARIF Trigger: AAAAATCCTGGCTGTGTGCCATGGAGTCATGTATAA...TGCTGCTTGAATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | GGATCTTCTCTGAAGTTGTCAGCAGGCTTGTCACTCTGCATTTCTTCTAGAAGATGTTACTGCAGTGGGTaGTGTTTTCAACATGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSSLKLSAGLSLCISSRRCYCSG*CFQHVL Trigger: CAGCACATGTTGAAAACACCACCCACTGCAGTAACA...TCTTCTAGAAGAAATGCAGAGTGACAAGCCTGCTGACAACTTCAGAGAAGATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | CAGGGAGGATTTTTATACCTCTGCATTTCTTCTAGAAGACCCTTTCAGCAGTCTAAGAACTCTTCATGCTaGTCCAAAAGGAGTCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: QGGFLYLCISSRRPFQQSKNSSC*SKRSPC Trigger: GCATGGACTCCTTTTGGATCAGCATGAAGAGTTCTT...AGACTGCTGAAAGGGTCTTCTAGAAGAAATGCAGAGGTATAAAAATCCTCCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR TCA 90 bp | TCAGAACATGATAAACATAGGATCTTCTCTGAAGTTGTCAGCAGGCTTGTCACTGTTTTCAACATGTGCTaGGCTGTGTCAATGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SEHDKHRIFSEVVSRLVTVFNMC*AVSMKA Trigger: GGCCTTCATTGACACAGCTCAGCACATGTTGAAAAC...AGTGACAAGCCTGCTGACAACTTCAGAGAAGATCCTATGTTTATCATGTTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | AGGATCTTCTCTGAAGTTGTCAGCAGGCTTGTCACTTTAGCAGTACAGCAAACAATTTCATTCAGGCAGTaGAACACAGGCTTCAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RIFSEVVSRLVTLAVQQTISFRQ*NTGFSK Trigger: TTTGCTGAAGCCTGTGTTTCACTGCCTGAATGAAAT...TGTTTGCTGTACTGCTAAAGTGACAAGCCTGCTGACAACTTCAGAGAAGATCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR GCA 90 bp | CTTGTCACTTTAGCAGTACAGCAAACAAAGGGAGATAAAAATAGAGGAGTGAGCGCCACATTCACATCATaGTCTGTTACTGCAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LVTLAVQQTKGDKNRGVSATFTS*SVTAVG Trigger: ACCCACTGCAGTAACAGAGCATGATGTGAATGTGGC...GCTCACTCCTCTATTTTTATCTCCCTTTGTTTGCTGTACTGCTAAAGTGACAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR GCA 90 bp | CTTGTCACTTTAGCAGTACAGCAAACAAAGGGAGATAAAAATAGAGGAGTGAGCTACTCAATCGTCAGGTaGAACAGAGGGAGAAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LVTLAVQQTKGDKNRGVSYSIVR*NRGRRL Trigger: CAACCTTCTCCCTCTGTTGCACCTGACGATTGAGTA...GCTCACTCCTCTATTTTTATCTCCCTTTGTTTGCTGTACTGCTAAAGTGACAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR GCA 90 bp | AAGACCCTTTCAGCAGTCTGCAGGCATTTGATGAATGATTTGAGAGATTTGTTAATTGGGCCAGCAGATTaGTTAGGAAGTGGTCGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KTLSAVCRHLMNDLRDLLIGPAD*LGSGRV Trigger: CACACGACCACTTCCTAAGCAATCTGCTGGCCCAAT...TAACAAATCTCTCAAATCATTCATCAAATGCCTGCAGACTGCTGAAAGGGTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | ATAGGATCTTCTCTGAAGTTGTCAGCAGGCTTGTCACTCTGCATTTCTTCTAGAACTGGGGTGAAGAAATaGAAAATCCTGGGAAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: IGSSLKLSAGLSLCISSRTGVKK*KILGNL Trigger: CAGGTTTCCCAGGATTTTCCATTTCTTCACCCCAGT...TCTAGAAGAAATGCAGAGTGACAAGCCTGCTGACAACTTCAGAGAAGATCCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186659.7 |
||
| 3UTR CAA 72 bp | GCAGTCTGCAGGCATTTGATGAATGATTTGAGAGATTaGTTACAGACATCAGAATGTGGCAGGGCTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AVCRHLMNDLRD*LQTSECGRAVS Trigger: TGAAACAGCCCTGCCACATTCTGATGTCTGTAACAAATCTCTCAAATCATTCATCAAATGCCTGCAGACTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | TTTATTTTAGATTATGAACATACAGTACCTAGAGTAGAGGGCTTTGGTTTGGCAGCTGAGCTGTGTCAATaGAGGCCTGGAACAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FILDYEHTVPRVEGFGLAAELCQ*RPGTVL Trigger: GAGAACTGTTCCAGGCCTTCATTGACACAGCTCAGC...TGCCAAACCAAAGCCCTCTACTCTAGGTACTGTATGTTCATAATCTAAAATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | CAGAACATGATAAACATAGGATCTTCTCTGAAGTTGTCAGCAGGCTTGTCACTTGACCTAGGTTCTGACTaGCCAGTGAACAAAAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: QNMINIGSSLKLSAGLSLDLGSD*PVNKNC Trigger: ACAGTTTTTGTTCACTGGTCAGTCAGAACCTAGGTC...AAGTGACAAGCCTGCTGACAACTTCAGAGAAGATCCTATGTTTATCATGTTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR TCA 90 bp | GAACATGATAAACATAGGATCTTCTCTGAAGTTGTCAGCAGGCTTGTCACTTTAAATCTTGAACAGGAGTaGAGACTGGCGACTAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EHDKHRIFSEVVSRLVTLNLEQE*RLATKA Trigger: GGCTTTAGTCGCCAGTCTTCACTCCTGTTCAAGATT...TAAAGTGACAAGCCTGCTGACAACTTCAGAGAAGATCCTATGTTTATCATGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTTTAGATTATGAACATACAGTACCTAGAGTAGAGGGCTTTGGTTTGGCAGCTTGGCGATACGGCTaGAAAACTGAATCCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FILDYEHTVPRVEGFGLAAWRYG*KTESSP Trigger: AGGGCTGGATTCAGTTTTGCAGCCGTATCGCCAAGC...TGCCAAACCAAAGCCCTCTACTCTAGGTACTGTATGTTCATAATCTAAAATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | ATCCTCTTTAGCCAGAATTGCCCTTTTACTAGTCTGAAAGAATTAGAACTCACTATTGGGCCAGCAGATTaGTTAGGAAGTGGTCGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ILFSQNCPFTSLKELELTIGPAD*LGSGRV Trigger: CACACGACCACTTCCTAAGCAATCTGCTGGCCCAAT...AGTGAGTTCTAATTCTTTCAGACTAGTAAAAGGGCAATTCTGGCTAAAGAGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR CCA 90 bp | AAGACCCTTTCAGCAGTCTGCAGGCATTTGATGAATGATTTGAGAGATTTGTTAGCGAATGTGTCCTCCTaGTTTTTCAAGATGGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: KTLSAVCRHLMNDLRDLLANVSS*FFKMDP Trigger: AGGGTCCATCTTGAAAAACCAGGAGGACACATTCGC...TAACAAATCTCTCAAATCATTCATCAAATGCCTGCAGACTGCTGAAAGGGTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| 3UTR CAA 72 bp | ACAAAGGGAGATAAAAATAGAGGAGTGAGCTTTATTTaGTGGCATCACTGTCAAGGTTATCCCAGGCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: TKGDKNRGVSFI*WHHCQGYPRLP Trigger: AGGTAGCCTGGGATAACCTTGACAGTGATGCCACAAAATAAAGCTCACTCCTCTATTTTTATCTCCCTTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| 3UTR CAA 72 bp | ATAAACATAGGATCTTCTCTGAAGTTGTCAGCAGGCTaGTCACTCTGCATTTCTTCTAGAAGACCCTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: INIGSSLKLSAG*SLCISSRRPFQ Trigger: CTGAAAGGGTCTTCTAGAAGAAATGCAGAGTGACAAGCCTGCTGACAACTTCAGAGAAGATCCTATGTTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | ATAGGAGCTAAACTGAGTGTCCCTCCCTCATTCACTTCCCCTACTTTTTACAGAGATCTAAGGAGTAATTaGCATGTGATATGGAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: IGAKLSVPPSFTSPTFYRDLRSN*HVIWRD Trigger: ATCTCTCCATATCACATGTCAATTACTCCTTAGATC...TCTGTAAAAAGTAGGGGAAGTGAATGAGGGAGGGACACTCAGTTTAGCTCCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | AAGACCCTTTCAGCAGTCTGCAGGCATTTGATGAATGATTTGAGAGATTTGTTAAAGAACTCTTCATGCTaGTCCAAAAGGAGTCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: KTLSAVCRHLMNDLRDLLKNSSC*SKRSPC Trigger: GCATGGACTCCTTTTGGATCAGCATGAAGAGTTCTT...TAACAAATCTCTCAAATCATTCATCAAATGCCTGCAGACTGCTGAAAGGGTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | CTTGTCACTTTAGCAGTACAGCAAACAAAGGGAGATAAAAATAGAGGAGTGAGCATTTCATTCAGGCAGTaGAACACAGGCTTCAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LVTLAVQQTKGDKNRGVSISFRQ*NTGFSK Trigger: TTTGCTGAAGCCTGTGTTTCACTGCCTGAATGAAAT...GCTCACTCCTCTATTTTTATCTCCCTTTGTTTGCTGTACTGCTAAAGTGACAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR GCA 90 bp | TTTACAGACATTGCTTTAGGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCTTTTGGCTTTTAATTTaGTCCACTACAACCATCACA | + |
|
Preference number: 4 (lower is better) Translates to: FTDIALGVFDVVVTDPSCFWLLI*STTTIT Trigger: TGTGATGGTTGTAGTGGAGCAAATTAAAAGCCAAAA...GCATGAGGGGTCTGTCACCACCACATCAAATACCCCTAAAGCAATGTCTGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | ATCCTCTTTAGCCAGAATTGCCCTTTTACTAGTCTGAAAGAATTAGAACTCACTGCCACATTCACATCATaGTCTGTTACTGCAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ILFSQNCPFTSLKELELTATFTS*SVTAVG Trigger: ACCCACTGCAGTAACAGAGCATGATGTGAATGTGGC...AGTGAGTTCTAATTCTTTCAGACTAGTAAAAGGGCAATTCTGGCTAAAGAGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR GCA 90 bp | ACTTTAGCAGTACAGCAAACAAAGGGAGATAAAAATAGAGGAGTGAGCTTTATTGGGGTGAAGAGAATGTaGAGTGGCCACTGTACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TLAVQQTKGDKNRGVSFIGVKRM*SGHCTL Trigger: CAAAGTACAGTGGCCACTGCACATTCTCTTCACCCC...AATAAAGCTCACTCCTCTATTTTTATCTCCCTTTGTTTGCTGTACTGCTAAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR CCA 90 bp | GTTGTAGTAACTGGGATGTCTTCATCTGTTTCTTTGAGCTTAATCTCAGAACATAGAAATGGAAAATCCTaGGAAACCTGCAGGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: VVVTGMSSSVSLSLISEHRNGKS*ETCRPL Trigger: GAGTGGCCTGCAGGTTTCCCAGGATTTTCCATTTCT...ATGTTCTGAGATTAAGCTCAAAGAAACAGATGAAGACATCCCAGTTACTACAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | GAACATGATAAACATAGGATCTTCTCTGAAGTTGTCAGCAGGCTTGTCACTTTAGAAGAGAATGTGCAGTaGCCACTGTACTTTGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EHDKHRIFSEVVSRLVTLEENVQ*PLYFVG Trigger: TCCTACAAAGTACAGTGGCCACTGCACATTCTCTTC...TAAAGTGACAAGCCTGCTGACAACTTCAGAGAAGATCCTATGTTTATCATGTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR CCA 90 bp | GTAACTGGGATGTCTTCATCTGTTTCTTTGAGCTTAATCTCAGAACATGATAAAACCAAGAAGGCCATGTaGTTTCTTAGGCGCCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: VTGMSSSVSLSLISEHDKTKKAM*FLRRHL Trigger: CAAGTGGCGCCTAAGAAACCACATGGCCTTCTTGGT...TTTATCATGTTCTGAGATTAAGCTCAAAGAAACAGATGAAGACATCCCAGTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | TATAAAATAAGCTGTCACAACTGTTGGAAGTTATTCCTTCCTCACACTCATCATAGAAGGCACTTCTCTTaGCTGGGTGGCATCTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: YKISCHNCWKLFLPHTHHRRHFS*LGGIFV Trigger: CACAAAGATGCCACCCAGCCAAGAGAAGTGCCTTCT...ATGATGAGTGTGAGGAAGGAATAACTTCCAACAGTTGTGACAGCTTATTTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110658.8 |
||
| CDS-3UTR TCA 90 bp | ACTTTAGCAGTACAGCAAACAAAGGGAGATAAAAATAGAGGAGTGAGCTTTATTCTAGTCTCACTGGGGTaGAGAAATGGAAAATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLAVQQTKGDKNRGVSFILVSLG*RNGKSW Trigger: CCAGGATTTTCCATTTCTTCACCCCAGTGAGACTAG...AATAAAGCTCACTCCTCTATTTTTATCTCCCTTTGTTTGCTGTACTGCTAAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR TCA 90 bp | TTTATTTTAGATTATGAACATACAGTACCTAGAGTAGAGGGCTTTGGTTTGGCAGGAGTAATTGACATGTaGTATGGAGAGATGCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FILDYEHTVPRVEGFGLAGVIDM*YGEMRV Trigger: GACCCGCATCTCTCCATATCACATGTCAATTACTCC...TGCCAAACCAAAGCCCTCTACTCTAGGTACTGTATGTTCATAATCTAAAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | TTTATTTTAGATTATGAACATACAGTACCTAGAGTAGAGGGCTTTGGTTTGGCACACTGGAAAGAATCTTaGACAGGAGTGAAGACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FILDYEHTVPRVEGFGLAHWKES*TGVKTG Trigger: GCCAGTCTTCACTCCTGTTCAAGATTCTTTCCAGTG...TGCCAAACCAAAGCCCTCTACTCTAGGTACTGTATGTTCATAATCTAAAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | AATTGCCCTTTTACTAGTCTGAAAGAATTAGAACTCACTGGCTCAATTCTTCAGTCTGAGTTGATCTGGTaGTTCCGAACACTGGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NCPFTSLKELELTGSILQSELIW*FRTLER Trigger: TCTTTCCAGTGTTCGGAATCACCAGATCAACTCAGA...CTGAAGAATTGAGCCAGTGAGTTCTAATTCTTTCAGACTAGTAAAAGGGCAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR TCA 90 bp | GTAACTGGGATGTCTTCATCTGTTTCTTTGAGCTTAATCTCAGAACATGATAAAGAGCCAAATCTGAGTTaGTCTGGTGATTCCGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: VTGMSSSVSLSLISEHDKEPNLS*SGDSEH Trigger: GTGTTCGGAATCACCAGATCAACTCAGATTTGGCTC...TTTATCATGTTCTGAGATTAAGCTCAAAGAAACAGATGAAGACATCCCAGTTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR GCA 90 bp | TCCTCACACTCATCATCATCATCCCTGTTAGCGAACGGCTTCTCATTCTCTAAATTTTGGCTTTTAATTTaGTCCACTACAACCATCACA | + |
|
Preference number: 4 (lower is better) Translates to: SSHSSSSSLLANGFSFSKFWLLI*STTTIT Trigger: TGTGATGGTTGTAGTGGAGCAAATTAAAAGCCAAAA...TTTAGAGAATGAGAAGCCGTTCGCTAACAGGGATGATGATGATGAGTGTGAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR GCA 90 bp | TATAAAATAAGCTGTCACAACTGTTGGAAGTTATTCCTTCCTCACACTCATCATATTAGGCGCAGGTCCTaGAGTTCTCTCAGCTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YKISCHNCWKLFLPHTHHIRRRS*SSLSCF Trigger: AAAACAGCTGAGAGAACTGCAGGACCTGCGCCTAAT...ATGATGAGTGTGAGGAAGGAATAACTTCCAACAGTTGTGACAGCTTATTTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR CCA 90 bp | GTAACTGGGATGTCTTCATCTGTTTCTTTGAGCTTAATCTCAGAACATGATAAAAGAAATGGAAAATCCTaGGAAACCTGCAGGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: VTGMSSSVSLSLISEHDKRNGKS*ETCRPL Trigger: GAGTGGCCTGCAGGTTTCCCAGGATTTTCCATTTCT...TTTATCATGTTCTGAGATTAAGCTCAAAGAAACAGATGAAGACATCCCAGTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | GTTGTAGTAACTGGGATGTCTTCATCTGTTTCTTTGAGCTTAATCTCAGAACATGAGAGTACCAGAAGATaGGCCCTGTTTGATGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VVVTGMSSSVSLSLISEHESTRR*ALFDEE Trigger: TTCTTCATCAAACAGGGCCCATCTTCTGGTACTCTC...ATGTTCTGAGATTAAGCTCAAAGAAACAGATGAAGACATCCCAGTTACTACAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| 3UTR CAA 72 bp | TCTCAGAACATGATAAACATAGGATCTTCTCTGAAGTaGTCAGCAGGCTTGTCACTCTGCATTTCTTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SQNMINIGSSLK*SAGLSLCISSR Trigger: TCTAGAAGAAATGCAGAGTGACAAGCCTGCTGACAACTTCAGAGAAGATCCTATGTTTATCATGTTCTGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | GTTGTAGTAACTGGGATGTCTTCATCTGTTTCTTTGAGCTTAATCTCAGAACATATTTCATTCAGGCAGTaGAACACAGGCTTCAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VVVTGMSSSVSLSLISEHISFRQ*NTGFSK Trigger: TTTGCTGAAGCCTGTGTTTCACTGCCTGAATGAAAT...ATGTTCTGAGATTAAGCTCAAAGAAACAGATGAAGACATCCCAGTTACTACAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | TTTATTTTAGATTATGAACATACAGTACCTAGAGTAGAGGGCTTTGGTTTGGCAACTGGGGTGAAGAAATaGAAAATCCTGGGAAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: FILDYEHTVPRVEGFGLATGVKK*KILGNL Trigger: CAGGTTTCCCAGGATTTTCCATTTCTTCACCCCAGT...TGCCAAACCAAAGCCCTCTACTCTAGGTACTGTATGTTCATAATCTAAAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | GTAACTGGGATGTCTTCATCTGTTTCTTTGAGCTTAATCTCAGAACATGATAAAGAGAGTACCAGAAGATaGGCCCTGTTTGATGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VTGMSSSVSLSLISEHDKESTRR*ALFDEE Trigger: TTCTTCATCAAACAGGGCCCATCTTCTGGTACTCTC...TTTATCATGTTCTGAGATTAAGCTCAAAGAAACAGATGAAGACATCCCAGTTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | ATCCTCTTTAGCCAGAATTGCCCTTTTACTAGTCTGAAAGAATTAGAACTCACTAGCAAAATAAAGGATTaGGCCAGCAGATTGCTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILFSQNCPFTSLKELELTSKIKD*ASRLLR Trigger: CCTAAGCAATCTGCTGGCCCAATCCTTTATTTTGCT...AGTGAGTTCTAATTCTTTCAGACTAGTAAAAGGGCAATTCTGGCTAAAGAGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR CCA 90 bp | GTTGTAGTAACTGGGATGTCTTCATCTGTTTCTTTGAGCTTAATCTCAGAACATAGCAAAATAAAGGATTaGGCCAGCAGATTGCTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VVVTGMSSSVSLSLISEHSKIKD*ASRLLR Trigger: CCTAAGCAATCTGCTGGCCCAATCCTTTATTTTGCT...ATGTTCTGAGATTAAGCTCAAAGAAACAGATGAAGACATCCCAGTTACTACAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | GAACATGATAAACATAGGATCTTCTCTGAAGTTGTCAGCAGGCTTGTCACTTTAGATCTAAGGAGTAATTaGCATGTGATATGGAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: EHDKHRIFSEVVSRLVTLDLRSN*HVIWRD Trigger: ATCTCTCCATATCACATGTCAATTACTCCTTAGATC...TAAAGTGACAAGCCTGCTGACAACTTCAGAGAAGATCCTATGTTTATCATGTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR GCA 90 bp | TCAGAACATGATAAACATAGGATCTTCTCTGAAGTTGTCAGCAGGCTTGTCACTTTTTGGCTTTTAATTTaGTCCACTACAACCATCACA | + |
|
Preference number: 4 (lower is better) Translates to: SEHDKHRIFSEVVSRLVTFWLLI*STTTIT Trigger: TGTGATGGTTGTAGTGGAGCAAATTAAAAGCCAAAA...AGTGACAAGCCTGCTGACAACTTCAGAGAAGATCCTATGTTTATCATGTTCTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CCA 90 bp | GTAACTGGGATGTCTTCATCTGTTTCTTTGAGCTTAATCTCAGAACATGATAAAAGCAAAATAAAGGATTaGGCCAGCAGATTGCTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VTGMSSSVSLSLISEHDKSKIKD*ASRLLR Trigger: CCTAAGCAATCTGCTGGCCCAATCCTTTATTTTGCT...TTTATCATGTTCTGAGATTAAGCTCAAAGAAACAGATGAAGACATCCCAGTTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | TTTATTTTAGATTATGAACATACAGTACCTAGAGTAGAGGGCTTTGGTTTGGCAGATCTAAGGAGTAATTaGCATGTGATATGGAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FILDYEHTVPRVEGFGLADLRSN*HVIWRD Trigger: ATCTCTCCATATCACATGTCAATTACTCCTTAGATC...TGCCAAACCAAAGCCCTCTACTCTAGGTACTGTATGTTCATAATCTAAAATAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR TCA 90 bp | ACTTTAGCAGTACAGCAAACAAAGGGAGATAAAAATAGAGGAGTGAGCTTTATTGTCAGGTTCACATTTTaGTTCTCAAACATTTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: TLAVQQTKGDKNRGVSFIVRFTF*FSNIWT Trigger: TGTCCAAATGTTTGAGAATCAAAATGTGAACCTGAC...AATAAAGCTCACTCCTCTATTTTTATCTCCCTTTGTTTGCTGTACTGCTAAAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| 3UTR CAA 72 bp | TGTCTTGTCTGTGAGCAATCACCGACAATAGCTAAATaGAGTATGTGTGGCTGTTTGAATAGTACTTTATTT | + |
|
Preference number: 4 (lower is better) Translates to: CLVCEQSPTIAK*SMCGCLNSTLF Trigger: AAATAAAGTACTATTCAAACAGCCACACATACTCAATTTAGCTATTGTCGGTGATTGCTCACAGACAAGACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR CAA 90 bp | CCTCATGCCCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGCCCATGCAGTCCCCCTaGGCCCTGCTGGGGAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: PHAQPRCSSVLKPCNCLWPMQSP*ALLGRM Trigger: CATCCTCCCCAGCAGGGCCAAGGGGGACTGCATGGG...CCACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGGGCATGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | CCCTCATGCCCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGCCCATGCAGTCCCCCTaGGCCCTGCTGGGGAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: PSCPASVLKCAEALQLPVPMQSP*ALLGRM Trigger: CATCCTCCCCAGCAGGGCCAAGGGGGACTGCATGGG...CACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGGGCATGAGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS GCA 90 bp | ATCCGATCTACCACCTGCTCAAAATCCACCAGGCTGAAGAGTGGCTaGTGCTTGAGCCGGTGCAGCTCGGCAGCGAATGTGTCCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IRSTTCSKSTRLKSG*CLSRCSSAANVSSW Trigger: CCAGGAGGACACATTCGCTGCCGAGCTGCACCGGCTCAAGCAGCAGCCACTCTTCAGCCTGGTGGATTTTGAGCAGGTGGTAGATCGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | CCCTCATGCCCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGTGCAGGCCACTCCGCTaGTTCCAGGTGAAAATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PSCPASVLKCAEALQLPVCRPLR*FQVKMD Trigger: GTCCATTTTCACCTGGAACAAGCGGAGTGGCCTGCA...CACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGGGCATGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS GCA 90 bp | CAAGCAGTGCTTGGCGATACGGCTGCAAAACTGAATCCAGCCCTGTaGAGAAGGCTCTCAGGTAGATCCCATGCAGTCCCCCTTGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: QAVLGDTAAKLNPAL*RRLSGRSHAVPLGP Trigger: AGGGCCAAGGGGGACTGCATGGGATCTACCTGAGAGCCTTCTGCACAGGGCTGGATTCAGTTTTGCAGCCGTATCGCCAAGCACTGCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS GCA 90 bp | CGATCTACCACCTGCTCAAAATCCACCAGGCTGAAGAGTGGCTGCTaGTTGAGCCGGTGCAGCTCGGCAGCGAATGTGTCCTCCTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RSTTCSKSTRLKSGC*LSRCSSAANVSSWF Trigger: AAACCAGGAGGACACATTCGCTGCCGAGCTGCACCGGCTCAAGCAGCAGCCACTCTTCAGCCTGGTGGATTTTGAGCAGGTGGTAGATCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS GCA 90 bp | TGCGTCCGTCTGGTTAGATTTGAGGTGTTTGCGCTGCATCTGGAGTaGCCAGCAGTGCTGCAGTTCAGCTTGGACACGGCGCACACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: CVRLVRFEVFALHLE*PAVLQFSLDTAHTQ Trigger: CTGAGTGTGCGCCGTGTCCAAGCTGAACTGCAGCACTGCTGGGCACTCCAGATGCAGCGCAAACACCTCAAATCTAACCAGACGGACGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS GCA 90 bp | CGCCACTTGACTGCGTCCGTCTGGTTAGATTTGAGGTGTTTGCGCTaGATCTGGAGTGCCCAGCAGTGCTGCAGTTCAGCTTGGACACGG | + |
|
Preference number: 5 (lower is better) Translates to: RHLTASVWLDLRCLR*IWSAQQCCSSAWTR Trigger: CCGTGTCCAAGCTGAACTGCAGCACTGCTGGGCACTCCAGATGCAGCGCAAACACCTCAAATCTAACCAGACGGACGCAGTCAAGTGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | GTCAGCAGAGGGATATCAGACCCCAGTTCCCCTACAGGAATGGCAGGGAGGATTGTGCTGCAGTTCAGCTaGGACACGGCGCACACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VSRGISDPSSPTGMAGRIVLQFS*DTAHTQ Trigger: CTGAGTGTGCGCCGTGTCCAAGCTGAACTGCAGCAC...AATCCTCCCTGCCATTCCTGTAGGGGAACTGGGGTCTGATATCCCTCTGCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR CAA 90 bp | CCCTCATGCCCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGATTGGGCCAGCAGATaGCTTAGGAAGTGGTCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PSCPASVLKCAEALQLPVDWASR*LRKWSC Trigger: ACACGACCACTTCCTAAGCAATCTGCTGGCCCAATC...CACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGGGCATGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS GCA 90 bp | TTCCAGAGGTGCTCAGCCACAGTGCTACGAATCCGATCTACCACCTaGTCAAAATCCACCAGGCTGAAGAGTGGCTGCTGCTTGAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: FQRCSATVLRIRSTT*SKSTRLKSGCCLSR Trigger: CCGGCTCAAGCAGCAGCCACTCTTCAGCCTGGTGGATTTTGAGCAGGTGGTAGATCGGATTCGTAGCACTGTGGCTGAGCACCTCTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS CCA 90 bp | TTGACTGCGTCCGTCTGGTTAGATTTGAGGTGTTTGCGCTGCATCTaGAGTGCCCAGCAGTGCTGCAGTTCAGCTTGGACACGGCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: LTASVWLDLRCLRCI*SAQQCCSSAWTRRT Trigger: TGTGCGCCGTGTCCAAGCTGAACTGCAGCACTGCTGGGCACTCCAGATGCAGCGCAAACACCTCAAATCTAACCAGACGGACGCAGTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | ACTGCCTGTGGTATCACAAGAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGAAGAGTGGCTGCTGCTaGAGCCGGTGCAGCTCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TACGITRMGDPVPHCWGEKSGCC*SRCSSA Trigger: TGCCGAGCTGCACCGGCTCAAGCAGCAGCCACTCTT...CTCTCCCCAACAATGAGGCACTGGATCACCCATTCTTGTGATACCACAGGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | CCTCATGCCCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGTCCGTCTGGTTAGATTaGAGGTGTTTGCGCTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: PHAQPRCSSVLKPCNCLWSVWLD*RCLRCI Trigger: GATGCAGCGCAAACACCTCAAATCTAACCAGACGGA...CCACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGGGCATGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | GGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCCCAGCCTCGGTGCTCAAGGATTGGGCCAGCAGATaGCTTAGGAAGTGGTCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GVFDVVVTDPSCPASVLKDWASR*LRKWSC Trigger: ACACGACCACTTCCTAAGCAATCTGCTGGCCCAATC...CTTGAGCACCGAGGCTGGGCATGAGGGGTCTGTCACCACCACATCAAATACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS TCA 90 bp | ATGGAAAATCCTGGGAAACCTGCAGGCCACTCCGCTTGTTCCAGGTaGAAATGGACCCTGGGTACCCACTCAGGGCCAAGAGCAGTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: MENPGKPAGHSACSR*KWTLGTHSGPRAVR Trigger: ACGAACTGCTCTTGGCCCTGAGTGGGTACCCAGGGTCCATTTTCACCTGGAACAAGCGGAGTGGCCTGCAGGTTTCCCAGGATTTTCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS TCA 90 bp | GTGCCAAGCCGGCAGAGTCGATTCAGGACACTAGTCTCACTGGGGTaGAGAAATGGAAAATCCTGGGAAACCTGCAGGCCACTCCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VPSRQSRFRTLVSLG*RNGKSWETCRPLRL Trigger: CAAGCGGAGTGGCCTGCAGGTTTCCCAGGATTTTCCATTTCTTCACCCCAGTGAGACTAGTGTCCTGAATCGACTCTGCCGGCTTGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS GCA 90 bp | TGCTCAAAATCCACCAGGCTGAAGAGTGGCTGCTGCTTGAGCCGGTaGAGCTCGGCAGCGAATGTGTCCTCCTGGTTTTTCAAGATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: CSKSTRLKSGCCLSR*SSAANVSSWFFKMD Trigger: GTCCATCTTGAAAAACCAGGAGGACACATTCGCTGCCGAGCTGCACCGGCTCAAGCAGCAGCCACTCTTCAGCCTGGTGGATTTTGAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS GCA 90 bp | GGGGGATGTCTCCCGAGAAGGCACTTCTCTTGGCTGGGTGGCATCTaGTTTGTGGTCCTTCCCATGATACTCAATCGTCAGGTGCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: GGCLPRRHFSWLGGI*FVVLPMILNRQVQQ Trigger: CTGTTGCACCTGACGATTGAGTATCATGGGAAGGACCACAAAGCAGATGCCACCCAGCCAAGAGAAGTGCCTTCTCGGGAGACATCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039541.12 |
||
| CDS CCA 90 bp | AAGAAGGCCATGTGGTTTCTTAGGCGCCACTTGACTGCGTCCGTCTaGTTAGATTTGAGGTGTTTGCGCTGCATCTGGAGTGCCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KKAMWFLRRHLTASV*LDLRCLRCIWSAQQ Trigger: CTGCTGGGCACTCCAGATGCAGCGCAAACACCTCAAATCTAACCAGACGGACGCAGTCAAGTGGCGCCTAAGAAACCACATGGCCTTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | ATAGGAGCTAAACTGAGTGTCCCTCCCTCATTCACTTCCCCTACTTTTTACAGACCCATGCAGTCCCCCTaGGCCCTGCTGGGGAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: IGAKLSVPPSFTSPTFYRPMQSP*ALLGRM Trigger: CATCCTCCCCAGCAGGGCCAAGGGGGACTGCATGGG...TCTGTAAAAAGTAGGGGAAGTGAATGAGGGAGGGACACTCAGTTTAGCTCCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | GAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGAATTGGATTCAAGCAGCATAAGAGTGGCTGCTGCTaGAGCCGGTGCAGCTCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: EWVIQCLIVGERIGFKQHKSGCC*SRCSSA Trigger: TGCCGAGCTGCACCGGCTCAAGCAGCAGCCACTCTT...ATGCTGCTTGAATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS CCA 90 bp | AGATGCGGGTCAGCCAGGAACTCTTGTTCCAAATCAAGCAGTGCTTaGCGATACGGCTGCAAAACTGAATCCAGCCCTGTGCAGAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RCGSARNSCSKSSSA*RYGCKTESSPVQKA Trigger: AGCCTTCTGCACAGGGCTGGATTCAGTTTTGCAGCCGTATCGCCAAGCACTGCTTGATTTGGAACAAGAGTTCCTGGCTGACCCGCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | CCCTCATGCCCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGAGATGGACCCTTTCCTaGTCAGGTTCACATTTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: PSCPASVLKCAEALQLPVRWTLS*SGSHFD Trigger: ATCAAAATGTGAACCTGACAAGGAAAGGGTCCATCT...CACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGGGCATGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | CGGTGCTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGTATCACAAGAATGGGGATTGGGCCAGCAGATaGCTTAGGAAGTGGTCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RCSSVLKPCNCLWYHKNGDWASR*LRKWSC Trigger: ACACGACCACTTCCTAAGCAATCTGCTGGCCCAATC...CCCATTCTTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS TCA 90 bp | CTCTTGTTCCAAATCAAGCAGTGCTTGGCGATACGGCTGCAAAACTaGATCCAGCCCTGTGCAGAAGGCTCTCAGGTAGATCCCATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLFQIKQCLAIRLQN*IQPCAEGSQVDPMQ Trigger: CTGCATGGGATCTACCTGAGAGCCTTCTGCACAGGGCTGGATTCAGTTTTGCAGCCGTATCGCCAAGCACTGCTTGATTTGGAACAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS GCA 90 bp | TGGTTAGATTTGAGGTGTTTGCGCTGCATCTGGAGTGCCCAGCAGTaGTGCAGTTCAGCTTGGACACGGCGCACACTCAGTAAGTACTTA | + |
|
Preference number: 5 (lower is better) Translates to: WLDLRCLRCIWSAQQ*CSSAWTRRTLSKYL Trigger: TAAGTACTTACTGAGTGTGCGCCGTGTCCAAGCTGAACTGCAGCACTGCTGGGCACTCCAGATGCAGCGCAAACACCTCAAATCTAACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | CCCTCATGCCCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGAACTGTTTCCAGGATTaGACAGCCATGAATCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PSCPASVLKCAEALQLPVNCFQD*TAMNLL Trigger: CAAAAGATTCATGGCTGTCAAATCCTGGAAACAGTT...CACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGGGCATGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | TCTTCTCTGAAGTTGTCAGCAGGCTTGTCACTCTGCATTTCTTCTAGAAGACCCGTGCTGCAGTTCAGCTaGGACACGGCGCACACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSLKLSAGLSLCISSRRPVLQFS*DTAHTQ Trigger: CTGAGTGTGCGCCGTGTCCAAGCTGAACTGCAGCAC...GGGTCTTCTAGAAGAAATGCAGAGTGACAAGCCTGCTGACAACTTCAGAGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186659.7 |
||
| CDS TCA 90 bp | TCAGCTGGGCCGCTCCGCGCTCATCCAGTGGACCTAGGTTCTGACTaGCCAGTGAACAAAAACTGTGACAGAGATCTAGGATTTCATTCA | + |
|
Preference number: 5 (lower is better) Translates to: SAGPLRAHPVDLGSD*PVNKNCDRDLGFHS Trigger: TGAATGAAATCCTAGATCTCTGTCACAGTTTTTGTTCACTGGTCAGTCAGAACCTAGGTCCACTGGATGAGCGCGGAGCGGCCCAGCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS CCA 90 bp | GTCCTCCTCATCCTCTTCCAGCTGCGCACTGAGAGTACCAGAAGATaGGCCCTGTTTGATGAAGAACTCTTCATGCTGATCCAAAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VLLILFQLRTESTRR*ALFDEELFMLIQKE Trigger: CTCCTTTTGGATCAGCATGAAGAGTTCTTCATCAAACAGGGCCCATCTTCTGGTACTCTCAGTGCGCAGCTGGAAGAGGATGAGGAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | AAAGCTCACAGGCTCTCTGAAGGGTTTTCTCATTTGGTGGTGACACAGAAGCTGTGCAGGCCACTCCGCTaGTTCCAGGTGAAAATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: KAHRLSEGFSHLVVTQKLCRPLR*FQVKMD Trigger: GTCCATTTTCACCTGGAACAAGCGGAGTGGCCTGCA...CAGCTTCTGTGTCACCACCAAATGAGAAAACCCTTCAGAGAGCCTGTGAGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS CCA 90 bp | TGTTTGCGCTGCATCTGGAGTGCCCAGCAGTGCTGCAGTTCAGCTTaGACACGGCGCACACTCAGTAAGTACTTAAAAACAACATTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: CLRCIWSAQQCCSSA*TRRTLSKYLKTTLY Trigger: GTACAATGTTGTTTTTAAGTACTTACTGAGTGTGCGCCGTGTCCAAGCTGAACTGCAGCACTGCTGGGCACTCCAGATGCAGCGCAAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | CCTGTGGTATCACAAGAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGAATTAGGATGGTGGTCCTGTaGCTGCACATGGCCTGTATA | + |
|
Preference number: 5 (lower is better) Translates to: PVVSQEWVIQCLIVGERIRMVVL*LHMACI Trigger: TATACAGGCCATGTGCAGCAACAGGACCACCATCCT...AATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTCTTGTGATACCACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | AGAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGAATTGGATTCAAGCAGCATTTCTTAGGCGCCACTaGACTGCGTCCGTCTGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: RMGDPVPHCWGENWIQAAFLRRH*TASVWL Trigger: TAACCAGACGGACGCAGTCAAGTGGCGCCTAAGAAA...TGCTGCTTGAATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | ACCCACCCAACAGATGTCTTCAAAATCCTTCGTGTGGTCAGCAGAGGGATATCATTTCTTAGGCGCCACTaGACTGCGTCCGTCTGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: THPTDVFKILRVVSRGISFLRRH*TASVWL Trigger: TAACCAGACGGACGCAGTCAAGTGGCGCCTAAGAAA...TGATATCCCTCTGCTGACCACACGAAGGATTTTGAAGACATCTGTTGGGTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS TCA 90 bp | TTACTGCAGTGGGTGGTGTTTTCAACATGTGCTGAGCTGTGTCAATaGAGGCCTGGAACAGTTCTCCTCGTCCCAGCAGGTAAAAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLQWVVFSTCAELCQ*RPGTVLLVPAGKSL Trigger: AAGACTTTTACCTGCTGGGACGAGGAGAACTGTTCCAGGCCTTCATTGACACAGCTCAGCACATGTTGAAAACACCACCCACTGCAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS CCA 90 bp | AGCAACCAATCACCCCTACTTACAGGCTTCAGCAAAATAAAGGATTaGGCCAGCAGATTGCTTAGGAAGTGGTCGTGTGCCAATCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: SNQSPLLTGFSKIKD*ASRLLRKWSCANRM Trigger: CATCCGATTGGCACACGACCACTTCCTAAGCAATCTGCTGGCCCAATCCTTTATTTTGCTGAAGCCTGTAAGTAGGGGTGATTGGTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110657.2 |
||
| CDS-3UTR CAA 90 bp | CACTCTGCATTTCTTCTAGAAGACCCTTTCAGCAGTCTGCAGGCATTTGATGAATGCAGGCCACTCCGCTaGTTCCAGGTGAAAATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: HSAFLLEDPFSSLQAFDECRPLR*FQVKMD Trigger: GTCCATTTTCACCTGGAACAAGCGGAGTGGCCTGCA...TTCATCAAATGCCTGCAGACTGCTGAAAGGGTCTTCTAGAAGAAATGCAGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | AGAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGAATTGGATTCAAGCAGCAAACAGAGGGAGAAGGTaGTCGTCATCTAGCAACACC | + |
|
Preference number: 5 (lower is better) Translates to: RMGDPVPHCWGENWIQAANRGRR*SSSSNT Trigger: GGTGTTGCTAGATGACGACAACCTTCTCCCTCTGTT...TGCTGCTTGAATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | AAAGCTCACAGGCTCTCTGAAGGGTTTTCTCATTTGGTGGTGACACAGAAGCTGTCCGTCTGGTTAGATTaGAGGTGTTTGCGCTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: KAHRLSEGFSHLVVTQKLSVWLD*RCLRCI Trigger: GATGCAGCGCAAACACCTCAAATCTAACCAGACGGA...CAGCTTCTGTGTCACCACCAAATGAGAAAACCCTTCAGAGAGCCTGTGAGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR CAA 90 bp | TCTTCTCTGAAGTTGTCAGCAGGCTTGTCACTCTGCATTTCTTCTAGAAGACCCTTTCTTAGGCGCCACTaGACTGCGTCCGTCTGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SSLKLSAGLSLCISSRRPFLRRH*TASVWL Trigger: TAACCAGACGGACGCAGTCAAGTGGCGCCTAAGAAA...GGGTCTTCTAGAAGAAATGCAGAGTGACAAGCCTGCTGACAACTTCAGAGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186659.7 |
||
| CDS TCA 90 bp | AGAGTACCAGAAGATGGGCCCTGTTTGATGAAGAACTCTTCATGCTaGTCCAAAAGGAGTCCATGCAGCATCCAGGCTGAGAGCTGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: RVPEDGPCLMKNSSC*SKRSPCSIQAESCL Trigger: TAAACAGCTCTCAGCCTGGATGCTGCATGGACTCCTTTTGGATCAGCATGAAGAGTTCTTCATCAAACAGGGCCCATCTTCTGGTACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS CCA 90 bp | CTGTTGAAAGGCCACATTCACATCATGCTCTGTTACTGCAGTGGGTaGTGTTTTCAACATGTGCTGAGCTGTGTCAATGAAGGCCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLKGHIHIMLCYCSG*CFQHVLSCVNEGLE Trigger: TTCCAGGCCTTCATTGACACAGCTCAGCACATGTTGAAAACACCACCCACTGCAGTAACAGAGCATGATGTGAATGTGGCCTTTCAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS CCA 90 bp | GGCTTCAGCAAAATAAAGGATTGGGCCAGCAGATTGCTTAGGAAGTaGTCGTGTGCCAATCGGATGCTTTCAAAGTCCCTCGTAGAATTG | + |
|
Preference number: 5 (lower is better) Translates to: GFSKIKDWASRLLRK*SCANRMLSKSLVEL Trigger: CAATTCTACGAGGGACTTTGAAAGCATCCGATTGGCACACGACCACTTCCTAAGCAATCTGCTGGCCCAATCCTTTATTTTGCTGAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | TTTACAGACATTGCTTTAGGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCGTCAGCCAGGAACTCTaGTTCCAAATCAAGCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: FTDIALGVFDVVVTDPSCVSQEL*FQIKQC Trigger: GCACTGCTTGATTTGGAACAAGAGTTCCTGGCTGAC...GCATGAGGGGTCTGTCACCACCACATCAAATACCCCTAAAGCAATGTCTGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | ACTGCCTGTGGTATCACAAGAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGAGATGGACCCTTTCCTaGTCAGGTTCACATTTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: TACGITRMGDPVPHCWGERWTLS*SGSHFD Trigger: ATCAAAATGTGAACCTGACAAGGAAAGGGTCCATCT...CTCTCCCCAACAATGAGGCACTGGATCACCCATTCTTGTGATACCACAGGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | TTTACAGACATTGCTTTAGGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCAACAGAGGGAGAAGGTaGTCGTCATCTAGCAACACC | + |
|
Preference number: 5 (lower is better) Translates to: FTDIALGVFDVVVTDPSCNRGRR*SSSSNT Trigger: GGTGTTGCTAGATGACGACAACCTTCTCCCTCTGTT...GCATGAGGGGTCTGTCACCACCACATCAAATACCCCTAAAGCAATGTCTGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | TTTACAGACATTGCTTTAGGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCTCCGTCTGGTTAGATTaGAGGTGTTTGCGCTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: FTDIALGVFDVVVTDPSCSVWLD*RCLRCI Trigger: GATGCAGCGCAAACACCTCAAATCTAACCAGACGGA...GCATGAGGGGTCTGTCACCACCACATCAAATACCCCTAAAGCAATGTCTGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | AGGATCTTCTCTGAAGTTGTCAGCAGGCTTGTCACTTTAGCAGTACAGCAAACACAAATCAAGCAGTGCTaGGCGATACGGCTGCAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RIFSEVVSRLVTLAVQQTQIKQC*AIRLQN Trigger: GTTTTGCAGCCGTATCGCCAAGCACTGCTTGATTTG...TGTTTGCTGTACTGCTAAAGTGACAAGCCTGCTGACAACTTCAGAGAAGATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR CAA 90 bp | CACTCTGCATTTCTTCTAGAAGACCCTTTCAGCAGTCTGCAGGCATTTGATGAACAAATCAAGCAGTGCTaGGCGATACGGCTGCAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: HSAFLLEDPFSSLQAFDEQIKQC*AIRLQN Trigger: GTTTTGCAGCCGTATCGCCAAGCACTGCTTGATTTG...TTCATCAAATGCCTGCAGACTGCTGAAAGGGTCTTCTAGAAGAAATGCAGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | GGATCTTCTCTGAAGTTGTCAGCAGGCTTGTCACTCTGCATTTCTTCTAGAAGAGTCAGCCAGGAACTCTaGTTCCAAATCAAGCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GSSLKLSAGLSLCISSRRVSQEL*FQIKQC Trigger: GCACTGCTTGATTTGGAACAAGAGTTCCTGGCTGAC...TCTTCTAGAAGAAATGCAGAGTGACAAGCCTGCTGACAACTTCAGAGAAGATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | ACTGCCTGTGGTATCACAAGAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGAACTGTTTCCAGGATTaGACAGCCATGAATCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TACGITRMGDPVPHCWGENCFQD*TAMNLL Trigger: CAAAAGATTCATGGCTGTCAAATCCTGGAAACAGTT...CTCTCCCCAACAATGAGGCACTGGATCACCCATTCTTGTGATACCACAGGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | TTTATTTTAGATTATGAACATACAGTACCTAGAGTAGAGGGCTTTGGTTTGGCAAAGAGTGGCTGCTGCTaGAGCCGGTGCAGCTCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FILDYEHTVPRVEGFGLAKSGCC*SRCSSA Trigger: TGCCGAGCTGCACCGGCTCAAGCAGCAGCCACTCTT...TGCCAAACCAAAGCCCTCTACTCTAGGTACTGTATGTTCATAATCTAAAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | AGGATCTTCTCTGAAGTTGTCAGCAGGCTTGTCACTTTAGCAGTACAGCAAACAAACAGAGGGAGAAGGTaGTCGTCATCTAGCAACACC | + |
|
Preference number: 5 (lower is better) Translates to: RIFSEVVSRLVTLAVQQTNRGRR*SSSSNT Trigger: GGTGTTGCTAGATGACGACAACCTTCTCCCTCTGTT...TGTTTGCTGTACTGCTAAAGTGACAAGCCTGCTGACAACTTCAGAGAAGATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR CAA 90 bp | GTTGTAGTAACTGGGATGTCTTCATCTGTTTCTTTGAGCTTAATCTCAGAACATGTGCTGCAGTTCAGCTaGGACACGGCGCACACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VVVTGMSSSVSLSLISEHVLQFS*DTAHTQ Trigger: CTGAGTGTGCGCCGTGTCCAAGCTGAACTGCAGCAC...ATGTTCTGAGATTAAGCTCAAAGAAACAGATGAAGACATCCCAGTTACTACAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS TCA 90 bp | GATGCTTTCAAAGTCCCTCGTAGAATTGATCTGATGAAGCAGCTGTaGGAACTGAGACTCCAGCACATCTACCTGGAGATAGTACTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: DAFKVPRRIDLMKQL*ELRLQHIYLEIVLK Trigger: CTTCAGTACTATCTCCAGGTAGATGTGCTGGAGTCTCAGTTCTCACAGCTGCTTCATCAGATCAATTCTACGAGGGACTTTGAAAGCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | TTTACAGACATTGCTTTAGGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCACACTGGAAAGAATCTaGAACAGGAGTGAAGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: FTDIALGVFDVVVTDPSCTLERI*NRSEDW Trigger: CCAGTCTTCACTCCTGTTCAAGATTCTTTCCAGTGT...GCATGAGGGGTCTGTCACCACCACATCAAATACCCCTAAAGCAATGTCTGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | TCAGAACATGATAAACATAGGATCTTCTCTGAAGTTGTCAGCAGGCTTGTCACTGTCAGCCAGGAACTCTaGTTCCAAATCAAGCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SEHDKHRIFSEVVSRLVTVSQEL*FQIKQC Trigger: GCACTGCTTGATTTGGAACAAGAGTTCCTGGCTGAC...AGTGACAAGCCTGCTGACAACTTCAGAGAAGATCCTATGTTTATCATGTTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | CCTGTGGTATCACAAGAATGGGTGATCCAGTGCCTCATTGTTGGGGAGAGAATTCTTTTGGCTTTTAATTaGCTCCACTACAACCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: PVVSQEWVIQCLIVGERILLAFN*LHYNHH Trigger: GTGATGGTTGTAGTGGAGCAAATTAAAAGCCAAAAG...AATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTCTTGTGATACCACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | AATTGCCCTTTTACTAGTCTGAAAGAATTAGAACTCACTGGCTCAATTCTTCAGAGGATGGTGGTCCTGTaGCTGCACATGGCCTGTATA | + |
|
Preference number: 5 (lower is better) Translates to: NCPFTSLKELELTGSILQRMVVL*LHMACI Trigger: TATACAGGCCATGTGCAGCAACAGGACCACCATCCT...CTGAAGAATTGAGCCAGTGAGTTCTAATTCTTTCAGACTAGTAAAAGGGCAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGAGGATTTTTATACCTCTGCATTTCTTCTAGAAGACCCTTTCAGCAGTCTACACTGGAAAGAATCTaGAACAGGAGTGAAGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: QGGFLYLCISSRRPFQQSTLERI*NRSEDW Trigger: CCAGTCTTCACTCCTGTTCAAGATTCTTTCCAGTGT...AGACTGCTGAAAGGGTCTTCTAGAAGAAATGCAGAGGTATAAAAATCCTCCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR CAA 90 bp | CACTCTGCATTTCTTCTAGAAGACCCTTTCAGCAGTCTGCAGGCATTTGATGAACTTTTGGCTTTTAATTaGCTCCACTACAACCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: HSAFLLEDPFSSLQAFDELLAFN*LHYNHH Trigger: GTGATGGTTGTAGTGGAGCAAATTAAAAGCCAAAAG...TTCATCAAATGCCTGCAGACTGCTGAAAGGGTCTTCTAGAAGAAATGCAGAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | TTTATTTTAGATTATGAACATACAGTACCTAGAGTAGAGGGCTTTGGTTTGGCACAAATCAAGCAGTGCTaGGCGATACGGCTGCAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: FILDYEHTVPRVEGFGLAQIKQC*AIRLQN Trigger: GTTTTGCAGCCGTATCGCCAAGCACTGCTTGATTTG...TGCCAAACCAAAGCCCTCTACTCTAGGTACTGTATGTTCATAATCTAAAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS TCA 90 bp | TGTATTTTAAGTGTCAGAAATGTAAAGATGGACTTGAACATGCGATaGATAACAGTCTCATATCTCGTCAAGTCCAAGAGCCGACAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: CILSVRNVKMDLNMR*ITVSYLVKSKSRQG Trigger: TCCCTGTCGGCTCTTGGACTTGACGAGATATGAGACTGTTATTCATCGCATGTTCAAGTCCATCTTTACATTTCTGACACTTAAAATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110657.2 |
||
| CDS-3UTR CAA 90 bp | CTTGTCACTTTAGCAGTACAGCAAACAAAGGGAGATAAAAATAGAGGAGTGAGCAACTGTTTCCAGGATTaGACAGCCATGAATCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LVTLAVQQTKGDKNRGVSNCFQD*TAMNLL Trigger: CAAAAGATTCATGGCTGTCAAATCCTGGAAACAGTT...GCTCACTCCTCTATTTTTATCTCCCTTTGTTTGCTGTACTGCTAAAGTGACAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS-3UTR CAA 90 bp | TTTATTTTAGATTATGAACATACAGTACCTAGAGTAGAGGGCTTTGGTTTGGCAACACTGGAAAGAATCTaGAACAGGAGTGAAGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: FILDYEHTVPRVEGFGLATLERI*NRSEDW Trigger: CCAGTCTTCACTCCTGTTCAAGATTCTTTCCAGTGT...TGCCAAACCAAAGCCCTCTACTCTAGGTACTGTATGTTCATAATCTAAAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| CDS-3UTR CAA 90 bp | GTAACTGGGATGTCTTCATCTGTTTCTTTGAGCTTAATCTCAGAACATGATAAAAGATGGACCCTTTCCTaGTCAGGTTCACATTTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VTGMSSSVSLSLISEHDKRWTLS*SGSHFD Trigger: ATCAAAATGTGAACCTGACAAGGAAAGGGTCCATCT...TTTATCATGTTCTGAGATTAAGCTCAAAGAAACAGATGAAGACATCCCAGTTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS-3UTR CAA 90 bp | ACTTTAGCAGTACAGCAAACAAAGGGAGATAAAAATAGAGGAGTGAGCTTTATTCTTTTGGCTTTTAATTaGCTCCACTACAACCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: TLAVQQTKGDKNRGVSFILLAFN*LHYNHH Trigger: GTGATGGTTGTAGTGGAGCAAATTAAAAGCCAAAAG...AATAAAGCTCACTCCTCTATTTTTATCTCCCTTTGTTTGCTGTACTGCTAAAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 |
||
| CDS CAA 90 bp | CAGCCCTGTGCAGAAGGCTCTCAGGTAGATCCCATGCAGTCCCCCTaGGCCCTGCTGGGGAGGATGGTGGTCCTGTTGCTGCACATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: QPCAEGSQVDPMQSP*ALLGRMVVLLLHMA Trigger: GGCCATGTGCAGCAACAGGACCACCATCCTCCCCAGCAGGGCCAAGGGGGACTGCATGGGATCTACCTGAGAGCCTTCTGCACAGGGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS CAA 72 bp | GCAGAAGGCTCTCAGGTAGATCCCATGCAGTCCCCCTaGGCCCTGCTGGGGAGGATGGTGGTCCTGTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AEGSQVDPMQSP*ALLGRMVVLLL Trigger: CAGCAACAGGACCACCATCCTCCCCAGCAGGGCCAAGGGGGACTGCATGGGATCTACCTGAGAGCCTTCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| CDS GCA 72 bp | TCCACCAGGCTGAAGAGTGGCTGCTGCTTGAGCCGGTaGAGCTCGGCAGCGAATGTGTCCTCCTGGTTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: STRLKSGCCLSR*SSAANVSSWFF Trigger: GAAAAACCAGGAGGACACATTCGCTGCCGAGCTGCACCGGCTCAAGCAGCAGCCACTCTTCAGCCTGGTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| CDS GCA 72 bp | ACCTGCTCAAAATCCACCAGGCTGAAGAGTGGCTGCTaGTTGAGCCGGTGCAGCTCGGCAGCGAATGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TCSKSTRLKSGC*LSRCSSAANVS Trigger: GGACACATTCGCTGCCGAGCTGCACCGGCTCAAGCAGCAGCCACTCTTCAGCCTGGTGGATTTTGAGCAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| CDS GCA 72 bp | ACCACCTGCTCAAAATCCACCAGGCTGAAGAGTGGCTaGTGCTTGAGCCGGTGCAGCTCGGCAGCGAATGTG | + |
|
Preference number: 6 (lower is better) Translates to: TTCSKSTRLKSG*CLSRCSSAANV Trigger: CACATTCGCTGCCGAGCTGCACCGGCTCAAGCAGCAGCCACTCTTCAGCCTGGTGGATTTTGAGCAGGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| CDS CCA 72 bp | CCATGCAGTCCCCCTTGGCCCTGCTGGGGAGGATGGTaGTCCTGTTGCTGCACATGGCCTGTATACTGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PCSPPWPCWGGW*SCCCTWPVYCS Trigger: TGAACAGTATACAGGCCATGTGCAGCAACAGGACCACCATCCTCCCCAGCAGGGCCAAGGGGGACTGCATGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| CDS GCA 72 bp | TTGAGGTGTTTGCGCTGCATCTGGAGTGCCCAGCAGTaGTGCAGTTCAGCTTGGACACGGCGCACACTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LRCLRCIWSAQQ*CSSAWTRRTLS Trigger: ACTGAGTGTGCGCCGTGTCCAAGCTGAACTGCAGCACTGCTGGGCACTCCAGATGCAGCGCAAACACCTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| CDS CAA 90 bp | TCTACCACCTGCTCAAAATCCACCAGGCTGAAGAGTGGCTGCTGCTaGAGCCGGTGCAGCTCGGCAGCGAATGTGTCCTCCTGGTTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: STTCSKSTRLKSGCC*SRCSSAANVSSWFF Trigger: GAAAAACCAGGAGGACACATTCGCTGCCGAGCTGCACCGGCTCAAGCAGCAGCCACTCTTCAGCCTGGTGGATTTTGAGCAGGTGGTAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| CDS GCA 72 bp | CTGGTTAGATTTGAGGTGTTTGCGCTGCATCTGGAGTaGCCAGCAGTGCTGCAGTTCAGCTTGGACACGGCG | + |
|
Preference number: 6 (lower is better) Translates to: LVRFEVFALHLE*PAVLQFSLDTA Trigger: CGCCGTGTCCAAGCTGAACTGCAGCACTGCTGGGCACTCCAGATGCAGCGCAAACACCTCAAATCTAACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| CDS CCA 72 bp | CAGGCCACTCCGCTTGTTCCAGGTGAAAATGGACCCTaGGTACCCACTCAGGGCCAAGAGCAGTTCGTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: QATPLVPGENGP*VPTQGQEQFVN Trigger: ATTCACGAACTGCTCTTGGCCCTGAGTGGGTACCCAGGGTCCATTTTCACCTGGAACAAGCGGAGTGGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| CDS CAA 72 bp | CTTAGGCGCCACTTGACTGCGTCCGTCTGGTTAGATTaGAGGTGTTTGCGCTGCATCTGGAGTGCCCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LRRHLTASVWLD*RCLRCIWSAQQ Trigger: CTGCTGGGCACTCCAGATGCAGCGCAAACACCTCAAATCTAACCAGACGGACGCAGTCAAGTGGCGCCTAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| CDS GCA 72 bp | TGCTCAGCCACAGTGCTACGAATCCGATCTACCACCTaGTCAAAATCCACCAGGCTGAAGAGTGGCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: CSATVLRIRSTT*SKSTRLKSGCC Trigger: GCAGCAGCCACTCTTCAGCCTGGTGGATTTTGAGCAGGTGGTAGATCGGATTCGTAGCACTGTGGCTGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| CDS GCA 72 bp | ACTGCGTCCGTCTGGTTAGATTTGAGGTGTTTGCGCTaGATCTGGAGTGCCCAGCAGTGCTGCAGTTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: TASVWLDLRCLR*IWSAQQCCSSA Trigger: AGCTGAACTGCAGCACTGCTGGGCACTCCAGATGCAGCGCAAACACCTCAAATCTAACCAGACGGACGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| CDS CAA 90 bp | ATGTGGTTTCTTAGGCGCCACTTGACTGCGTCCGTCTGGTTAGATTaGAGGTGTTTGCGCTGCATCTGGAGTGCCCAGCAGTGCTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: MWFLRRHLTASVWLD*RCLRCIWSAQQCCS Trigger: ACTGCAGCACTGCTGGGCACTCCAGATGCAGCGCAAACACCTCAAATCTAACCAGACGGACGCAGTCAAGTGGCGCCTAAGAAACCACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| CDS GCA 72 bp | CTCCCGAGAAGGCACTTCTCTTGGCTGGGTGGCATCTaGTTTGTGGTCCTTCCCATGATACTCAATCGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LPRRHFSWLGGI*FVVLPMILNRQ Trigger: CTGACGATTGAGTATCATGGGAAGGACCACAAAGCAGATGCCACCCAGCCAAGAGAAGTGCCTTCTCGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039541.12 |
||
| CDS CCA 72 bp | TTGAGCCGGTGCAGCTCGGCAGCGAATGTGTCCTCCTaGTTTTTCAAGATGGACCCTTTCCTTGTCAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LSRCSSAANVSS*FFKMDPFLVRF Trigger: GAACCTGACAAGGAAAGGGTCCATCTTGAAAAACCAGGAGGACACATTCGCTGCCGAGCTGCACCGGCTCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| CDS CCA 72 bp | GGGATGTCTCCCGAGAAGGCACTTCTCTTGGCTGGGTaGCATCTGCTTTGTGGTCCTTCCCATGATACTCAA | + |
|
Preference number: 6 (lower is better) Translates to: GMSPEKALLLAG*HLLCGPSHDTQ Trigger: TTGAGTATCATGGGAAGGACCACAAAGCAGATGCCACCCAGCCAAGAGAAGTGCCTTCTCGGGAGACATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039541.12 |
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| CDS CCA 72 bp | TCCGTCTGGTTAGATTTGAGGTGTTTGCGCTGCATCTaGAGTGCCCAGCAGTGCTGCAGTTCAGCTTGGACA | + |
|
Preference number: 6 (lower is better) Translates to: SVWLDLRCLRCI*SAQQCCSSAWT Trigger: TGTCCAAGCTGAACTGCAGCACTGCTGGGCACTCCAGATGCAGCGCAAACACCTCAAATCTAACCAGACGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| CDS CCA 72 bp | GGGATGTCTCCCGAGAAGGCACTTCTCTTGGCTGGGTaGCATCTTTGTGGTCCTTCCCATGATACTCAATCG | + |
|
Preference number: 6 (lower is better) Translates to: GMSPEKALLLAG*HLCGPSHDTQS Trigger: CGATTGAGTATCATGGGAAGGACCACAAAGATGCCACCCAGCCAAGAGAAGTGCCTTCTCGGGAGACATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS CAA 72 bp | AATGGAAAATCCTGGGAAACCTGCAGGCCACTCCGCTaGTTCCAGGTGAAAATGGACCCTGGGTACCCACTC | + |
|
Preference number: 6 (lower is better) Translates to: NGKSWETCRPLR*FQVKMDPGYPL Trigger: GAGTGGGTACCCAGGGTCCATTTTCACCTGGAACAAGCGGAGTGGCCTGCAGGTTTCCCAGGATTTTCCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS TCA 72 bp | CGGCAGAGTCGATTCAGGACACTAGTCTCACTGGGGTaGAGAAATGGAAAATCCTGGGAAACCTGCAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RQSRFRTLVSLG*RNGKSWETCRP Trigger: TGGCCTGCAGGTTTCCCAGGATTTTCCATTTCTTCACCCCAGTGAGACTAGTGTCCTGAATCGACTCTGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS TCA 72 bp | TGGGTGGTGTTTTCAACATGTGCTGAGCTGTGTCAATaGAGGCCTGGAACAGTTCTCCTCGTCCCAGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: WVVFSTCAELCQ*RPGTVLLVPAG Trigger: ACCTGCTGGGACGAGGAGAACTGTTCCAGGCCTTCATTGACACAGCTCAGCACATGTTGAAAACACCACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS TCA 72 bp | CCGCTCCGCGCTCATCCAGTGGACCTAGGTTCTGACTaGCCAGTGAACAAAAACTGTGACAGAGATCTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PLRAHPVDLGSD*PVNKNCDRDLG Trigger: TCCTAGATCTCTGTCACAGTTTTTGTTCACTGGTCAGTCAGAACCTAGGTCCACTGGATGAGCGCGGAGCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS TCA 72 bp | CAAATCAAGCAGTGCTTGGCGATACGGCTGCAAAACTaGATCCAGCCCTGTGCAGAAGGCTCTCAGGTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: QIKQCLAIRLQN*IQPCAEGSQVD Trigger: ATCTACCTGAGAGCCTTCTGCACAGGGCTGGATTCAGTTTTGCAGCCGTATCGCCAAGCACTGCTTGATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS GCA 72 bp | TCTTGTTCCAAATCAAGCAGTGCTTGGCGATACGGCTaGAAAACTGAATCCAGCCCTGTGCAGAAGGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SCSKSSSAWRYG*KTESSPVQKAL Trigger: GAGAGCCTTCTGCACAGGGCTGGATTCAGTTTTGCAGCCGTATCGCCAAGCACTGCTTGATTTGGAACAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS CCA 72 bp | TCAGCCAGGAACTCTTGTTCCAAATCAAGCAGTGCTTaGCGATACGGCTGCAAAACTGAATCCAGCCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SARNSCSKSSSA*RYGCKTESSPV Trigger: CACAGGGCTGGATTCAGTTTTGCAGCCGTATCGCCAAGCACTGCTTGATTTGGAACAAGAGTTCCTGGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
||
| CDS CCA 72 bp | ATGTGGTTTCTTAGGCGCCACTTGACTGCGTCCGTCTaGTTAGATTTGAGGTGTTTGCGCTGCATCTGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: MWFLRRHLTASV*LDLRCLRCIWS Trigger: ACTCCAGATGCAGCGCAAACACCTCAAATCTAACCAGACGGACGCAGTCAAGTGGCGCCTAAGAAACCACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| CDS TCA 72 bp | GAAGATGGGCCCTGTTTGATGAAGAACTCTTCATGCTaGTCCAAAAGGAGTCCATGCAGCATCCAGGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: EDGPCLMKNSSC*SKRSPCSIQAE Trigger: CTCAGCCTGGATGCTGCATGGACTCCTTTTGGATCAGCATGAAGAGTTCTTCATCAAACAGGGCCCATCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| CDS GCA 72 bp | AGTAAATCTGACTCTTCCACCATTAGCTTCCAGAGGTaGTCAGCCACAGTGCTACGAATCCGATCTACCACC | + |
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Preference number: 6 (lower is better) Translates to: SKSDSSTISFQR*SATVLRIRSTT Trigger: GGTGGTAGATCGGATTCGTAGCACTGTGGCTGAGCACCTCTGGAAGCTAATGGTGGAAGAGTCAGATTTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| CDS CCA 72 bp | ATCCTCTTCCAGCTGCGCACTGAGAGTACCAGAAGATaGGCCCTGTTTGATGAAGAACTCTTCATGCTGATC | + |
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Preference number: 6 (lower is better) Translates to: ILFQLRTESTRR*ALFDEELFMLI Trigger: GATCAGCATGAAGAGTTCTTCATCAAACAGGGCCCATCTTCTGGTACTCTCAGTGCGCAGCTGGAAGAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| CDS CCA 72 bp | CGAACACTGGAAAGAATCTTGAACAGGAGTGAAGACTaGCGACTAAAGCCCTTCACGAGAATGCTCAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: RTLERILNRSED*RLKPFTRMLSW Trigger: CCAGCTGAGCATTCTCGTGAAGGGCTTTAGTCGCCAGTCTTCACTCCTGTTCAAGATTCTTTCCAGTGTTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| CDS CCA 72 bp | TCACCCCTACTTACAGGCTTCAGCAAAATAAAGGATTaGGCCAGCAGATTGCTTAGGAAGTGGTCGTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: SPLLTGFSKIKD*ASRLLRKWSCA Trigger: GGCACACGACCACTTCCTAAGCAATCTGCTGGCCCAATCCTTTATTTTGCTGAAGCCTGTAAGTAGGGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110657.2 |
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| CDS CAA 72 bp | TCTACCAAGAAGGCCATGTGGTTTCTTAGGCGCCACTaGACTGCGTCCGTCTGGTTAGATTTGAGGTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: STKKAMWFLRRH*TASVWLDLRCL Trigger: CAAACACCTCAAATCTAACCAGACGGACGCAGTCAAGTGGCGCCTAAGAAACCACATGGCCTTCTTGGTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| CDS CAA 90 bp | CCCCTACTTACAGGCTTCAGCAAAATAAAGGATTGGGCCAGCAGATaGCTTAGGAAGTGGTCGTGTGCCAATCGGATGCTTTCAAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: PLLTGFSKIKDWASR*LRKWSCANRMLSKS Trigger: GGACTTTGAAAGCATCCGATTGGCACACGACCACTTCCTAAGCAATCTGCTGGCCCAATCCTTTATTTTGCTGAAGCCTGTAAGTAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110657.2 |
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| CDS TCA 72 bp | TCTGTTACTGCAGTGGGTGGTGTTTTCAACATGTGCTaGGCTGTGTCAATGAAGGCCTGGAACAGTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SVTAVGGVFNMC*AVSMKAWNSSP Trigger: AGGAGAACTGTTCCAGGCCTTCATTGACACAGCTCAGCACATGTTGAAAACACCACCCACTGCAGTAACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| CDS CAA 72 bp | ACAGGCTTCAGCAAAATAAAGGATTGGGCCAGCAGATaGCTTAGGAAGTGGTCGTGTGCCAATCGGATGCTT | + |
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Preference number: 6 (lower is better) Translates to: TGFSKIKDWASR*LRKWSCANRML Trigger: AAGCATCCGATTGGCACACGACCACTTCCTAAGCAATCTGCTGGCCCAATCCTTTATTTTGCTGAAGCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| CDS TCA 72 bp | GTGATTCCGAACACTGGAAAGAATCTTGAACAGGAGTaGAGACTGGCGACTAAAGCCCTTCACGAGAATGCT | + |
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Preference number: 6 (lower is better) Translates to: VIPNTGKNLEQE*RLATKALHENA Trigger: AGCATTCTCGTGAAGGGCTTTAGTCGCCAGTCTTCACTCCTGTTCAAGATTCTTTCCAGTGTTCGGAATCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039541.12 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| CDS CCA 72 bp | GGCCACATTCACATCATGCTCTGTTACTGCAGTGGGTaGTGTTTTCAACATGTGCTGAGCTGTGTCAATGAA | + |
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Preference number: 6 (lower is better) Translates to: GHIHIMLCYCSG*CFQHVLSCVNE Trigger: TTCATTGACACAGCTCAGCACATGTTGAAAACACCACCCACTGCAGTAACAGAGCATGATGTGAATGTGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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| CDS CCA 72 bp | AAAATAAAGGATTGGGCCAGCAGATTGCTTAGGAAGTaGTCGTGTGCCAATCGGATGCTTTCAAAGTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: KIKDWASRLLRK*SCANRMLSKSL Trigger: GAGGGACTTTGAAAGCATCCGATTGGCACACGACCACTTCCTAAGCAATCTGCTGGCCCAATCCTTTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039541.12 ENSMUST00000110657.2 ENSMUST00000110658.8 ENSMUST00000186659.7 |
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