Pregenerated sensors for TUBGCP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000759Ensembl transcript IDs: ENSMUST00000000776.15, ENSMUST00000164774.8, ENSMUST00000165321.2, ENSMUST00000172056.2
Found 213 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGAACGCCTCGTGTGCTGCAATAATGTGGTCCAGGTCCTGGGCCTaGTGCACTCTGTTCCACAGCTCATCCCAGGAGCACTCGAGAACC | + |
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Preference number: 1 (lower is better) Translates to: RNASCAAIMWSRSWA*CTLFHSSSQEHSRT Trigger: GGTTCTCGAGTGCTCCTGGGATGAGCTGTGGAACAGAGTGCAGCAGGCCCAGGACCTGGACCACATTATTGCAGCACACGAGGCGTTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR CCA 90 bp | GTGTTCAGGAACGCCTCGTGTGCTGCAATAATGTGGTCCAGGTCCTaGGCCTGCTGCACTCTGTTCCACAGCTCATCCCAGGAGCACTCG | + |
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Preference number: 1 (lower is better) Translates to: VFRNASCAAIMWSRS*ACCTLFHSSSQEHS Trigger: CGAGTGCTCCTGGGATGAGCTGTGGAACAGAGTGCAGCAGGCCCAGGACCTGGACCACATTATTGCAGCACACGAGGCGTTCCTGAACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR GCA 90 bp | AACGCCTCGTGTGCTGCAATAATGTGGTCCAGGTCCTGGGCCTGCTaGACTCTGTTCCACAGCTCATCCCAGGAGCACTCGAGAACCTCA | + |
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Preference number: 1 (lower is better) Translates to: NASCAAIMWSRSWAC*TLFHSSSQEHSRTS Trigger: TGAGGTTCTCGAGTGCTCCTGGGATGAGCTGTGGAACAGAGTGCAGCAGGCCCAGGACCTGGACCACATTATTGCAGCACACGAGGCGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR TCA 90 bp | AAAGGTGATGTAGTACTGCATCTGGTGGATGAAGTGCACCATCTCTaGGGCCAGGATGTGGCACTGGTGAAGCACCCCAGAGAACTCCGG | + |
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Preference number: 1 (lower is better) Translates to: KGDVVLHLVDEVHHL*GQDVALVKHPRELR Trigger: CCGGAGTTCTCTGGGGTGCTTCACCAGTGCCACATCCTGGCCTCAGAGATGGTGCACTTCATCCACCAGATGCAGTACTACATCACCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR TCA 90 bp | AGAGCATTTGGGAAACCCTTGGAGGTAGGGGTTTGTGAAGAAGGCTaGTTTCCAGTCAGAGTCCACGCCAGACGAGGCCCCAACTGCTGT | + |
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Preference number: 1 (lower is better) Translates to: RAFGKPLEVGVCEEG*FPVRVHARRGPNCC Trigger: ACAGCAGTTGGGGCCTCGTCTGGCGTGGACTCTGACTGGAAATCAGCCTTCTTCACAAACCCCTACCTCCAAGGGTTTCCCAAATGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172056.2 |
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| 3UTR TCA 90 bp | AGCAGCCTCACATCGAGCCTCTTAAGGATCTCCGGGCTGTCAAACTaGGCATTGGTGGCTCTCACAGCAGTTTCAAGAATCCCCGTCAAG | + |
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Preference number: 1 (lower is better) Translates to: SSLTSSLLRISGLSN*ALVALTAVSRIPVK Trigger: CTTGACGGGGATTCTTGAAACTGCTGTGAGAGCCACCAATGCTCAGTTTGACAGCCCGGAGATCCTTAAGAGGCTCGATGTGAGGCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR TCA 90 bp | GTTTCGAGAAAGAGCATTTGGGAAACCCTTGGAGGTAGGGGTTTGTaGAGAAGGCTGATTTCCAGTCAGAGTCCACGCCAGACGAGGCCC | + |
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Preference number: 1 (lower is better) Translates to: VSRKSIWETLGGRGL*RRLISSQSPRQTRP Trigger: GGGCCTCGTCTGGCGTGGACTCTGACTGGAAATCAGCCTTCTTCACAAACCCCTACCTCCAAGGGTTTCCCAAATGCTCTTTCTCGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172056.2 |
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| 3UTR CCA 90 bp | AGTTCTGGTTTGAGCAAATCCATTAAGTGCCGTATGAAGTCTCCTTaGCCAAGCAGCAGGTACCGTCGCATGGCCTGCATGTGTTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: SSGLSKSIKCRMKSP*PSSRYRRMACMCSS Trigger: GCTGGAACACATGCAGGCCATGCGACGGTACCTGCTGCTTGGCCAAGGAGACTTCATACGGCACTTAATGGATTTGCTCAAACCAGAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR GCA 90 bp | CGTATGAAGTCTCCTTGGCCAAGCAGCAGGTACCGTCGCATGGCCTaGATGTGTTCCAGCAGACTGTACTTTTTATTGAGGACATCCAAC | + |
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Preference number: 1 (lower is better) Translates to: RMKSPWPSSRYRRMA*MCSSRLYFLLRTSN Trigger: GTTGGATGTCCTCAATAAAAAGTACAGTCTGCTGGAACACATGCAGGCCATGCGACGGTACCTGCTGCTTGGCCAAGGAGACTTCATACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR GCA 90 bp | GTTGTTGCTGGCCGAACAAGTTCTGGTTTGAGCAAATCCATTAAGTaGCGTATGAAGTCTCCTTGGCCAAGCAGCAGGTACCGTCGCATG | + |
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Preference number: 1 (lower is better) Translates to: VVAGRTSSGLSKSIK*RMKSPWPSSRYRRM Trigger: CATGCGACGGTACCTGCTGCTTGGCCAAGGAGACTTCATACGGCACTTAATGGATTTGCTCAAACCAGAACTTGTTCGGCCAGCAACAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR TCA 90 bp | CCAGAGCTGCTCTGTACATCACGTCCTGGGCATTCTGAAGTTCAATaGTTTGGTCAAACACGGCTCTCAGTTGGTTTAAAAGCACCCTGG | + |
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Preference number: 1 (lower is better) Translates to: PELLCTSRPGHSEVQ*FGQTRLSVGLKAPW Trigger: CCAGGGTGCTTTTAAACCAACTGAGAGCCGTGTTTGACCAAATCATTGAACTTCAGAATGCCCAGGACGTGATGTACAGAGCAGCTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR TCA 90 bp | CTGCTGCACCACACCCTGGTAGAAGTGCGTCAATATTCGCAACTGTaGGCACATTTTTGGTATGGAGTCCTGGAATTCTCGGATCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: LLHHTLVEVRQYSQL*AHFWYGVLEFSDPL Trigger: AAGAGGATCCGAGAATTCCAGGACTCCATACCAAAAATGTGCTCACAGTTGCGAATATTGACGCACTTCTACCAGGGTGTGGTGCAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR TCA 90 bp | AGCTTCAGTAACTTCCAATGTGCCACCTGGATCCCCTTCTCTCCTTaGCCTTGTCAGGTTTCGAGAAAGAGCATTTGGGAAACCCTTGGA | + |
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Preference number: 1 (lower is better) Translates to: SFSNFQCATWIPFSP*PCQVSRKSIWETLG Trigger: TCCAAGGGTTTCCCAAATGCTCTTTCTCGAAACCTGACAAGGTCAAGGAGAGAAGGGGATCCAGGTGGCACATTGGAAGTTACTGAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165321.2 ENSMUST00000172056.2 |
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| 3UTR GCA 90 bp | CTTTTTCTCTTCAAACTGCAGACGCCTCTGCAGCTCCTCCAGAGCTaGTCTGTACATCACGTCCTGGGCATTCTGAAGTTCAATGATTTG | + |
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Preference number: 1 (lower is better) Translates to: LFLFKLQTPLQLLQS*SVHHVLGILKFNDL Trigger: CAAATCATTGAACTTCAGAATGCCCAGGACGTGATGTACAGAGCAGCTCTGGAGGAGCTGCAGAGGCGTCTGCAGTTTGAAGAGAAAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR TCA 90 bp | TGCAGCTCCTCCAGAGCTGCTCTGTACATCACGTCCTGGGCATTCTaGAGTTCAATGATTTGGTCAAACACGGCTCTCAGTTGGTTTAAA | + |
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Preference number: 1 (lower is better) Translates to: CSSSRAALYITSWAF*SSMIWSNTALSWFK Trigger: TTTAAACCAACTGAGAGCCGTGTTTGACCAAATCATTGAACTTCAGAATGCCCAGGACGTGATGTACAGAGCAGCTCTGGAGGAGCTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR CCA 90 bp | GGTAGAAGTGCGTCAATATTCGCAACTGTGAGCACATTTTTGGTATaGAGTCCTGGAATTCTCGGATCCTCTTGTTCTCCTCCTCTTCCT | + |
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Preference number: 1 (lower is better) Translates to: GRSASIFATVSTFLV*SPGILGSSCSPPLP Trigger: AGGAAGAGGAGGAGAACAAGAGGATCCGAGAATTCCAGGACTCCATACCAAAAATGTGCTCACAGTTGCGAATATTGACGCACTTCTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR TCA 90 bp | TTGGTGGCTCTCACAGCAGTTTCAAGAATCCCCGTCAAGTTATGCTaGTACAAAGTTGTTGCTGGCCGAACAAGTTCTGGTTTGAGCAAA | + |
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Preference number: 1 (lower is better) Translates to: LVALTAVSRIPVKLC*YKVVAGRTSSGLSK Trigger: TTTGCTCAAACCAGAACTTGTTCGGCCAGCAACAACTTTGTATCAGCATAACTTGACGGGGATTCTTGAAACTGCTGTGAGAGCCACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR GCA 90 bp | GTAATGAAGGAGGGGATCATTGACTTCCTCAGGGTATACTTGTCGTaGCATAGACGGTCAGTTTTAACTGTTGGATCAGACGCCACAAAA | + |
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Preference number: 1 (lower is better) Translates to: VMKEGIIDFLRVYLS*HRRSVLTVGSDATK Trigger: TTTTGTGGCGTCTGATCCAACAGTTAAAACTGACCGTCTATGGCACGACAAGTATACCCTGAGGAAGTCAATGATCCCCTCCTTCATTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR-3UTR CCA 90 bp | TACAGACACGCAAGTCCAGTGGATAACAAGACTTCTTCCAGCAGACACAGTGCTAGTCTCAGCCTTGCCTaGTTCAGCCAGCGGCCTGCG | + |
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Preference number: 2 (lower is better) Translates to: YRHASPVDNKTSSSRHSASLSLA*FSQRPA Trigger: CGCAGGCCGCTGGCTGAACCAGGCAAGGCTGAGACT...AGCACTGTGTCTGCTGGAAGAAGTCTTGTTATCCACTGGACTTGCGTGTCTGTA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
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| 3UTR-3UTR CCA 90 bp | AACTGCAGACGCCTCTGCAGCTCCTCCAGAGCTGCTCTGTACATCACGTCCTGGAGGACCTTCCTAGACTaGTCCATCGTAATGAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: NCRRLCSSSRAALYITSWRTFLD*SIVMKE Trigger: CTCCTTCATTACGATGGACCAGTCTAGGAAGGTCCT...CCAGGACGTGATGTACAGAGCAGCTCTGGAGGAGCTGCAGAGGCGTCTGCAGTT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGGGATCATTGACTTCCTCAGGGTATACTTGTCGTGCCATAGACGGTCAGTTCAGCAGACACAGTGCTaGACACTGGGGCCTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: EGIIDFLRVYLSCHRRSVQQTQC*TLGPVC Trigger: ACACACAGGCCCCAGTGTTCAGCACTGTGTCTGCTG...AACTGACCGTCTATGGCACGACAAGTATACCCTGAGGAAGTCAATGATCCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR-3UTR TCA 90 bp | CACGCTGTTTCTTTTTCTCTTCAAACTGCAGACGCCTCTGCAGCTCCTCCAGAGCGTGGTAATCCAGGCTaGAGACATCCCACCCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: HAVSFSLQTADASAAPPERGNPG*RHPTQC Trigger: ACACTGGGTGGGATGTCTTCAGCCTGGATTACCACG...CTCTGGAGGAGCTGCAGAGGCGTCTGCAGTTTGAAGAGAAAAAGAAACAGCGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR-3UTR TCA 90 bp | TACAGACACGCAAGTCCAGTGGATAACAAGACTTCTTCCAGCAGACACAGTGCTGAAGTGCACCATCTCTaGGGCCAGGATGTGGCACTG | + |
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Preference number: 2 (lower is better) Translates to: YRHASPVDNKTSSSRHSAEVHHL*GQDVAL Trigger: CAGTGCCACATCCTGGCCTCAGAGATGGTGCACTTC...AGCACTGTGTCTGCTGGAAGAAGTCTTGTTATCCACTGGACTTGCGTGTCTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR-3UTR TCA 90 bp | TACAGACACGCAAGTCCAGTGGATAACAAGACTTCTTCCAGCAGACACAGTGCTGACAGTGTGTGGAGATaGCGCGTGGGTAGTGATGAC | + |
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Preference number: 2 (lower is better) Translates to: YRHASPVDNKTSSSRHSADSVWR*RVGSDD Trigger: GTCATCACTACCCACGCGTCATCTCCACACACTGTC...AGCACTGTGTCTGCTGGAAGAAGTCTTGTTATCCACTGGACTTGCGTGTCTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
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| 3UTR-3UTR TCA 90 bp | CACGCAAGTCCAGTGGATAACAAGACTTCTTCCAGCAGACACAGTGCTGAACACAAGCTCAGGACAGGGTaGGACACCAAGCTCAGAATG | + |
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Preference number: 2 (lower is better) Translates to: HASPVDNKTSSSRHSAEHKLRTG*DTKLRM Trigger: CATTCTGAGCTTGGTGTCTCACCCTGTCCTGAGCTT...GTGTTCAGCACTGTGTCTGCTGGAAGAAGTCTTGTTATCCACTGGACTTGCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR-3UTR TCA 90 bp | AAAAATGTAAACTTCGGGAGGGAGAGAGGACAGTGTGTGGAGATGACGCGTGGGCGTTTTCTAAGTCTGTaGATAAATCCGCAGCGTCAC | + |
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Preference number: 2 (lower is better) Translates to: KNVNFGRERGQCVEMTRGRFLSL*INPQRH Trigger: GTGACGCTGCGGATTTATTCACAGACTTAGAAAACG...CCCACGCGTCATCTCCACACACTGTCCTCTCTCCCTCCCGAAGTTTACATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR-3UTR TCA 90 bp | GGTAGAAGTGCGTCAATATTCGCAACTGTGAGCACATTTTTGGTATGGAGTCCTTCCGGGCTGTCAAACTaGGCATTGGTGGCTCTCACA | + |
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Preference number: 2 (lower is better) Translates to: GRSASIFATVSTFLVWSPSGLSN*ALVALT Trigger: TGTGAGAGCCACCAATGCTCAGTTTGACAGCCCGGA...AGGACTCCATACCAAAAATGTGCTCACAGTTGCGAATATTGACGCACTTCTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR-3UTR CCA 90 bp | GTAACTTCCAATGTGCCACCTGGATCCCCTTCTCTCCTTGACCTTGTCAGGTTTTCGAGAAAGAGCATTTaGGAAACCCTTGGAGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: VTSNVPPGSPSLLDLVRFSRKSI*ETLGGR Trigger: CCTACCTCCAAGGGTTTCCCAAATGCTCTTTCTCGA...AAACCTGACAAGGTCAAGGAGAGAAGGGGATCCAGGTGGCACATTGGAAGTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165321.2 ENSMUST00000172056.2 |
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| 3UTR CAA 90 bp | TCCATCGTAATGAAGGAGGGGATCATTGACTTCCTCAGGGTATACTaGTCGTGCCATAGACGGTCAGTTTTAACTGTTGGATCAGACGCC | + |
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Preference number: 2 (lower is better) Translates to: SIVMKEGIIDFLRVY*SCHRRSVLTVGSDA Trigger: GGCGTCTGATCCAACAGTTAAAACTGACCGTCTATGGCACGACAAGTATACCCTGAGGAAGTCAATGATCCCCTCCTTCATTACGATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR CAA 90 bp | CACCCTGGTAGAAGTGCGTCAATATTCGCAACTGTGAGCACATTTTaGGTATGGAGTCCTGGAATTCTCGGATCCTCTTGTTCTCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: HPGRSASIFATVSTF*VWSPGILGSSCSPP Trigger: AGGAGGAGAACAAGAGGATCCGAGAATTCCAGGACTCCATACCAAAAATGTGCTCACAGTTGCGAATATTGACGCACTTCTACCAGGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR-3UTR CCA 90 bp | CACGCAAGTCCAGTGGATAACAAGACTTCTTCCAGCAGACACAGTGCTGAACACCAAACTGAGCATTGGTaGCTCTCACAGCAGTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: HASPVDNKTSSSRHSAEHQTEHW*LSQQFQ Trigger: TTGAAACTGCTGTGAGAGCCACCAATGCTCAGTTTG...GTGTTCAGCACTGTGTCTGCTGGAAGAAGTCTTGTTATCCACTGGACTTGCGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR-3UTR TCA 90 bp | CACGCAAGTCCAGTGGATAACAAGACTTCTTCCAGCAGACACAGTGCTGAACACCATTCTGAAGTTCAATaGTTTGGTCAAACACGGCTC | + |
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Preference number: 2 (lower is better) Translates to: HASPVDNKTSSSRHSAEHHSEVQ*FGQTRL Trigger: GAGCCGTGTTTGACCAAATCATTGAACTTCAGAATG...GTGTTCAGCACTGTGTCTGCTGGAAGAAGTCTTGTTATCCACTGGACTTGCGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR-3UTR CCA 90 bp | TACAGACACGCAAGTCCAGTGGATAACAAGACTTCTTCCAGCAGACACAGTGCTGACACGCAAGTCCAGTaGATAACAAGACTTCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: YRHASPVDNKTSSSRHSADTQVQ*ITRLLP Trigger: TGGAAGAAGTCTTGTTATCCACTGGACTTGCGTGTC...AGCACTGTGTCTGCTGGAAGAAGTCTTGTTATCCACTGGACTTGCGTGTCTGTA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
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| 3UTR CAA 90 bp | ACCTTCACAATCCAAGCTGATTTCTTCCTAACACTTATCAGAACTTaGAAAATAAGACAGTCTCAGCCTTGCCTGGTTCAGCCAGCGGCC | + |
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Preference number: 2 (lower is better) Translates to: TFTIQADFFLTLIRT*KIRQSQPCLVQPAA Trigger: GGCCGCTGGCTGAACCAGGCAAGGCTGAGACTGTCTTATTTTCAAAGTTCTGATAAGTGTTAGGAAGAAATCAGCTTGGATTGTGAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
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| 3UTR-3UTR TCA 90 bp | CACGCAAGTCCAGTGGATAACAAGACTTCTTCCAGCAGACACAGTGCTGAACACCAATATTCGCAACTGTaGGCACATTTTTGGTATGGA | + |
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Preference number: 2 (lower is better) Translates to: HASPVDNKTSSSRHSAEHQYSQL*AHFWYG Trigger: TCCATACCAAAAATGTGCTCACAGTTGCGAATATTG...GTGTTCAGCACTGTGTCTGCTGGAAGAAGTCTTGTTATCCACTGGACTTGCGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR-3UTR GCA 90 bp | TACAGACACGCAAGTCCAGTGGATAACAAGACTTCTTCCAGCAGACACAGTGCTAGCAAATCCATTAAGTaGCGTATGAAGTCTCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: YRHASPVDNKTSSSRHSASKSIK*RMKSPW Trigger: CCAAGGAGACTTCATACGGCACTTAATGGATTTGCT...AGCACTGTGTCTGCTGGAAGAAGTCTTGTTATCCACTGGACTTGCGTGTCTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR-3UTR TCA 90 bp | ATCAATGCCCTGGAATACGTAGAGAATATCTCTCACAAGAGCAGCTTCAGTAACGTTTGTGAAGAAGGCTaGTTTCCAGTCAGAGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: INALEYVENISHKSSFSNVCEEG*FPVRVH Trigger: GTGGACTCTGACTGGAAATCAGCCTTCTTCACAAAC...GTTACTGAAGCTGCTCTTGTGAGAGATATTCTCTACGTATTCCAGGGCATTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172056.2 |
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| 3UTR-3UTR CCA 90 bp | TGCGTCAATATTCGCAACTGTGAGCACATTTTTGGTATGGAGTCCTGGAATTCTATACAAAGTTGTTGCTaGCCGAACAAGTTCTGGTTT | + |
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Preference number: 2 (lower is better) Translates to: CVNIRNCEHIFGMESWNSIQSCC*PNKFWF Trigger: AAACCAGAACTTGTTCGGCCAGCAACAACTTTGTAT...AGAATTCCAGGACTCCATACCAAAAATGTGCTCACAGTTGCGAATATTGACGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR-3UTR CCA 90 bp | AGTTTGTTGTTGTTGAAATATAAATTACACGGTGGAAATAAGATGTCCCAGCACGACACGCAAGTCCAGTaGATAACAAGACTTCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: SLLLLKYKLHGGNKMSQHDTQVQ*ITRLLP Trigger: TGGAAGAAGTCTTGTTATCCACTGGACTTGCGTGTC...GTGCTGGGACATCTTATTTCCACCGTGTAATTTATATTTCAACAACAACAAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
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| 3UTR-3UTR CCA 90 bp | GATTTCTTCCTAACACTTATCAGAACTTTGAAAATAAGACAGTCTCAGCCTTGCCCAACAGATATTTGCTaGTCTCAAAATAAGCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: DFFLTLIRTLKIRQSQPCPTDIC*SQNKQH Trigger: ATGCTGCTTATTTTGAGACCAGCAAATATCTGTTGG...GCAAGGCTGAGACTGTCTTATTTTCAAAGTTCTGATAAGTGTTAGGAAGAAATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR GCA 72 bp | GCGGGAGGTGATGGTGTTCAGGAACGCCTCGTGTGCTaGAATAATGTGGTCCAGGTCCTGGGCCTGCTGCAC | + |
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Preference number: 3 (lower is better) Translates to: AGGDGVQERLVC*NNVVQVLGLLH Trigger: GTGCAGCAGGCCCAGGACCTGGACCACATTATTGCAGCACACGAGGCGTTCCTGAACACCATCACCTCCCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR GCA 72 bp | ACAGCGGGAGGTGATGGTGTTCAGGAACGCCTCGTGTaGTGCAATAATGTGGTCCAGGTCCTGGGCCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: TAGGDGVQERLV*CNNVVQVLGLL Trigger: CAGCAGGCCCAGGACCTGGACCACATTATTGCAGCACACGAGGCGTTCCTGAACACCATCACCTCCCGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR TCA 72 bp | GCTTCGCGTTGCACATGTGCCCTTTCCGGATGTCAGTaGGGATGTACTCCATGCGCTTGGCCCTCCACAGGA | + |
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Preference number: 3 (lower is better) Translates to: ASRCTCALSGCQ*GCTPCAWPSTG Trigger: TCCTGTGGAGGGCCAAGCGCATGGAGTACATCCTCACTGACATCCGGAAAGGGCACATGTGCAACGCGAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR TCA 72 bp | AAGTGCACCATCTCTGAGGCCAGGATGTGGCACTGGTaGAGCACCCCAGAGAACTCCGGCATGTTCCTCAGC | + |
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Preference number: 3 (lower is better) Translates to: KCTISEARMWHW*STPENSGMFLS Trigger: GCTGAGGAACATGCCGGAGTTCTCTGGGGTGCTTCACCAGTGCCACATCCTGGCCTCAGAGATGGTGCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR TCA 72 bp | GGGAAACCCTTGGAGGTAGGGGTTTGTGAAGAAGGCTaGTTTCCAGTCAGAGTCCACGCCAGACGAGGCCCC | + |
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Preference number: 3 (lower is better) Translates to: GKPLEVGVCEEG*FPVRVHARRGP Trigger: GGGGCCTCGTCTGGCGTGGACTCTGACTGGAAATCAGCCTTCTTCACAAACCCCTACCTCCAAGGGTTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172056.2 |
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| 3UTR CCA 72 bp | AACGCCTCGTGTGCTGCAATAATGTGGTCCAGGTCCTaGGCCTGCTGCACTCTGTTCCACAGCTCATCCCAG | + |
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Preference number: 3 (lower is better) Translates to: NASCAAIMWSRS*ACCTLFHSSSQ Trigger: CTGGGATGAGCTGTGGAACAGAGTGCAGCAGGCCCAGGACCTGGACCACATTATTGCAGCACACGAGGCGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| 3UTR CCA 72 bp | AACAAGACTTCTTCCAGCAGACACAGTGCTGAACACTaGGGCCTGTGTGTAGACAGGGGGCACCTGCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: NKTSSSRHSAEH*GLCVDRGHLQL Trigger: GAGCTGCAGGTGCCCCCTGTCTACACACAGGCCCCAGTGTTCAGCACTGTGTCTGCTGGAAGAAGTCTTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| 3UTR GCA 72 bp | CTTATCAGAACTTTGAAAATAAGACAGTCTCAGCCTTaGCTGGTTCAGCCAGCGGCCTGCGGCCAGGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LIRTLKIRQSQP*LVQPAACGQAG Trigger: GCCTGCCTGGCCGCAGGCCGCTGGCTGAACCAGGCAAGGCTGAGACTGTCTTATTTTCAAAGTTCTGATAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| 3UTR CCA 72 bp | GTGGCTCATGCACTCTCGTGTGAACACAGTGGCGATTaGTCCATCGACGTGGTAATCCAGGCTGAAGACATC | + |
|
Preference number: 3 (lower is better) Translates to: VAHALSCEHSGD*SIDVVIQAEDI Trigger: GATGTCTTCAGCCTGGATTACCACGTCGATGGACCAATCGCCACTGTGTTCACACGAGAGTGCATGAGCCAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| 3UTR GCA 72 bp | TCTCCTTGGCCAAGCAGCAGGTACCGTCGCATGGCCTaGATGTGTTCCAGCAGACTGTACTTTTTATTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SPWPSSRYRRMA*MCSSRLYFLLR Trigger: CCTCAATAAAAAGTACAGTCTGCTGGAACACATGCAGGCCATGCGACGGTACCTGCTGCTTGGCCAAGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| 3UTR GCA 72 bp | CGCTGTTTCTTTTTCTCTTCAAACTGCAGACGCCTCTaGAGCTCCTCCAGAGCTGCTCTGTACATCACGTCC | + |
|
Preference number: 3 (lower is better) Translates to: RCFFFSSNCRRL*SSSRAALYITS Trigger: GGACGTGATGTACAGAGCAGCTCTGGAGGAGCTGCAGAGGCGTCTGCAGTTTGAAGAGAAAAAGAAACAGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| 3UTR CCA 72 bp | TTGAGCAAATCCATTAAGTGCCGTATGAAGTCTCCTTaGCCAAGCAGCAGGTACCGTCGCATGGCCTGCATG | + |
|
Preference number: 3 (lower is better) Translates to: LSKSIKCRMKSP*PSSRYRRMACM Trigger: CATGCAGGCCATGCGACGGTACCTGCTGCTTGGCCAAGGAGACTTCATACGGCACTTAATGGATTTGCTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| 3UTR TCA 72 bp | AAGAGCATTTGGGAAACCCTTGGAGGTAGGGGTTTGTaGAGAAGGCTGATTTCCAGTCAGAGTCCACGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: KSIWETLGGRGL*RRLISSQSPRQ Trigger: CTGGCGTGGACTCTGACTGGAAATCAGCCTTCTTCACAAACCCCTACCTCCAAGGGTTTCCCAAATGCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172056.2 |
||
| 3UTR TCA 72 bp | ACATCGAGCCTCTTAAGGATCTCCGGGCTGTCAAACTaGGCATTGGTGGCTCTCACAGCAGTTTCAAGAATC | + |
|
Preference number: 3 (lower is better) Translates to: TSSLLRISGLSN*ALVALTAVSRI Trigger: GATTCTTGAAACTGCTGTGAGAGCCACCAATGCTCAGTTTGACAGCCCGGAGATCCTTAAGAGGCTCGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| 3UTR GCA 72 bp | GGCCGAACAAGTTCTGGTTTGAGCAAATCCATTAAGTaGCGTATGAAGTCTCCTTGGCCAAGCAGCAGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: GRTSSGLSKSIK*RMKSPWPSSRY Trigger: GTACCTGCTGCTTGGCCAAGGAGACTTCATACGGCACTTAATGGATTTGCTCAAACCAGAACTTGTTCGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| 3UTR CCA 72 bp | GTTGAACTCAGCAGCGTTACAGACACGCAAGTCCAGTaGATAACAAGACTTCTTCCAGCAGACACAGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: VELSSVTDTQVQ*ITRLLPADTVL Trigger: CAGCACTGTGTCTGCTGGAAGAAGTCTTGTTATCCACTGGACTTGCGTGTCTGTAACGCTGCTGAGTTCAAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| 3UTR TCA 72 bp | AACTTCCAATGTGCCACCTGGATCCCCTTCTCTCCTTaGCCTTGTCAGGTTTCGAGAAAGAGCATTTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: NFQCATWIPFSP*PCQVSRKSIWE Trigger: TTCCCAAATGCTCTTTCTCGAAACCTGACAAGGTCAAGGAGAGAAGGGGATCCAGGTGGCACATTGGAAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165321.2 ENSMUST00000172056.2 |
||
| 3UTR TCA 72 bp | CACACCCTGGTAGAAGTGCGTCAATATTCGCAACTGTaGGCACATTTTTGGTATGGAGTCCTGGAATTCTCG | + |
|
Preference number: 3 (lower is better) Translates to: HTLVEVRQYSQL*AHFWYGVLEFS Trigger: CGAGAATTCCAGGACTCCATACCAAAAATGTGCTCACAGTTGCGAATATTGACGCACTTCTACCAGGGTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| 3UTR GCA 72 bp | GAGGGGATCATTGACTTCCTCAGGGTATACTTGTCGTaGCATAGACGGTCAGTTTTAACTGTTGGATCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: EGIIDFLRVYLS*HRRSVLTVGSD Trigger: GTCTGATCCAACAGTTAAAACTGACCGTCTATGGCACGACAAGTATACCCTGAGGAAGTCAATGATCCCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| 3UTR CCA 72 bp | ATTCGCAACTGTGAGCACATTTTTGGTATGGAGTCCTaGAATTCTCGGATCCTCTTGTTCTCCTCCTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: IRNCEHIFGMES*NSRILLFSSSS Trigger: GGAAGAGGAGGAGAACAAGAGGATCCGAGAATTCCAGGACTCCATACCAAAAATGTGCTCACAGTTGCGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| 3UTR TCA 72 bp | CTCACAGCAGTTTCAAGAATCCCCGTCAAGTTATGCTaGTACAAAGTTGTTGCTGGCCGAACAAGTTCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LTAVSRIPVKLC*YKVVAGRTSSG Trigger: ACCAGAACTTGTTCGGCCAGCAACAACTTTGTATCAGCATAACTTGACGGGGATTCTTGAAACTGCTGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| 3UTR CCA 72 bp | GCGTCAATATTCGCAACTGTGAGCACATTTTTGGTATaGAGTCCTGGAATTCTCGGATCCTCTTGTTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: ASIFATVSTFLV*SPGILGSSCSP Trigger: AGGAGAACAAGAGGATCCGAGAATTCCAGGACTCCATACCAAAAATGTGCTCACAGTTGCGAATATTGACGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCGTCAATATTCGCAACTGTGAGCACATTTTTGGTATGGAGTCCTGGAATTCTGCTGATACAAAGTTGTaGCTGGCCGAACAAGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: CVNIRNCEHIFGMESWNSADTKL*LAEQVL Trigger: CAGAACTTGTTCGGCCAGCAACAACTTTGTATCAGC...AGAATTCCAGGACTCCATACCAAAAATGTGCTCACAGTTGCGAATATTGACGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| 3UTR TCA 72 bp | CTCTGTACATCACGTCCTGGGCATTCTGAAGTTCAATaGTTTGGTCAAACACGGCTCTCAGTTGGTTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LCTSRPGHSEVQ*FGQTRLSVGLK Trigger: TTTTAAACCAACTGAGAGCCGTGTTTGACCAAATCATTGAACTTCAGAATGCCCAGGACGTGATGTACAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| 3UTR GCA 72 bp | AAGAATCCCCGTCAAGTTATGCTGATACAAAGTTGTTaGTGGCCGAACAAGTTCTGGTTTGAGCAAATCCAT | + |
|
Preference number: 3 (lower is better) Translates to: KNPRQVMLIQSC*WPNKFWFEQIH Trigger: ATGGATTTGCTCAAACCAGAACTTGTTCGGCCAGCAACAACTTTGTATCAGCATAACTTGACGGGGATTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| 3UTR-3UTR CAA 90 bp | GATTTCTTCCTAACACTTATCAGAACTTTGAAAATAAGACAGTCTCAGCCTTGCTATGCTGATACAAAGTaGTTGCTGGCCGAACAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: DFFLTLIRTLKIRQSQPCYADTK*LLAEQV Trigger: AACTTGTTCGGCCAGCAACAACTTTGTATCAGCATA...GCAAGGCTGAGACTGTCTTATTTTCAAAGTTCTGATAAGTGTTAGGAAGAAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| 3UTR TCA 72 bp | ATAGGCAAGGAGAAGGGAAACCTTCACAATCCAAGCTaGTTTCTTCCTAACACTTATCAGAACTTTGAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: IGKEKGNLHNPS*FLPNTYQNFEN Trigger: ATTTTCAAAGTTCTGATAAGTGTTAGGAAGAAATCAGCTTGGATTGTGAAGGTTTCCCTTCTCCTTGCCTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR TCA 90 bp | TCAGCCAGCGGCCTGCGGCCAGGCAGGCTGAGGACACCTCCCTCCACGGCTCCCTGCGGTCCTGGTAGTTaGGCGGGAGGGTCTGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SASGLRPGRLRTPPSTAPCGPGS*AGGSEA Trigger: GGCCTCAGACCCTCCCGCTCAACTACCAGGACCGCA...GGGAGCCGTGGAGGGAGGTGTCCTCAGCCTGCCTGGCCGCAGGCCGCTGGCTGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR GCA 90 bp | TCAGCCAGCGGCCTGCGGCCAGGCAGGCTGAGGACACCTCCCTCCACGGCTCCCCCGGGAAGGAAAGGCTaGACAGGTGTGGGGCCACTA | + |
|
Preference number: 4 (lower is better) Translates to: SASGLRPGRLRTPPSTAPPGRKG*TGVGPL Trigger: TAGTGGCCCCACACCTGTGCAGCCTTTCCTTCCCGG...GGGAGCCGTGGAGGGAGGTGTCCTCAGCCTGCCTGGCCGCAGGCCGCTGGCTGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR CCA 90 bp | TCAGCCAGCGGCCTGCGGCCAGGCAGGCTGAGGACACCTCCCTCCACGGCTCCCTGTGCTGCAATAATGTaGTCCAGGTCCTGGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SASGLRPGRLRTPPSTAPCAAIM*SRSWAC Trigger: GCAGGCCCAGGACCTGGACCACATTATTGCAGCACA...GGGAGCCGTGGAGGGAGGTGTCCTCAGCCTGCCTGGCCGCAGGCCGCTGGCTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
||
| CDS-3UTR TCA 90 bp | TCAGCCAGCGGCCTGCGGCCAGGCAGGCTGAGGACACCTCCCTCCACGGCTCCCACCTACAAGTCCAAATaGGCGGTCCAGACTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SASGLRPGRLRTPPSTAPTYKSK*AVQTPL Trigger: CAGAGGAGTCTGGACCGCTCATTTGGACTTGTAGGT...GGGAGCCGTGGAGGGAGGTGTCCTCAGCCTGCCTGGCCGCAGGCCGCTGGCTGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR GCA 90 bp | TCAGCCAGCGGCCTGCGGCCAGGCAGGCTGAGGACACCTCCCTCCACGGCTCCCGAGCTCTTGGTGCAATaGGGCACAAAAACTCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: SASGLRPGRLRTPPSTAPELLVQ*GTKTLT Trigger: GGTCAGAGTTTTTGTGCCGCATTGCACCAAGAGCTC...GGGAGCCGTGGAGGGAGGTGTCCTCAGCCTGCCTGGCCGCAGGCCGCTGGCTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR CCA 90 bp | TCAGCCAGCGGCCTGCGGCCAGGCAGGCTGAGGACACCTCCCTCCACGGCTCCCAGCACATTTTTGGTATaGAGTCCTGGAATTCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SASGLRPGRLRTPPSTAPSTFLV*SPGILG Trigger: TCCGAGAATTCCAGGACTCCATACCAAAAATGTGCT...GGGAGCCGTGGAGGGAGGTGTCCTCAGCCTGCCTGGCCGCAGGCCGCTGGCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
||
| CDS-3UTR GCA 90 bp | TCACAGCTGCTTGAGGGGCCAGGCTTGAGTAAGCATGTACTAACCCAAGCCAGCCGCTGCTGCCCAGGCTaGCAGAGCTCTGTGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SQLLEGPGLSKHVLTQASRCCPG*QSSVPV Trigger: CACAGGCACAGAGCTCTGGCAGCCTGGGCAGCAGCG...GCTGGCTTGGGTTAGTACATGCTTACTCAAGCCTGGCCCCTCAAGCAGCTGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR GCA 90 bp | TGCCCTTTCCGGATGTCAGTGAGGATGTACTCCATGCGCTTGGCCCTCCACAGGCCGGGAAGGAAAGGCTaGACAGGTGTGGGGCCACTA | + |
|
Preference number: 4 (lower is better) Translates to: CPFRMSVRMYSMRLALHRPGRKG*TGVGPL Trigger: TAGTGGCCCCACACCTGTGCAGCCTTTCCTTCCCGG...CCTGTGGAGGGCCAAGCGCATGGAGTACATCCTCACTGACATCCGGAAAGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| 3UTR CAA 72 bp | GGCACCTGCAGCTCACAGCTGCTTGAGGGGCCAGGCTaGAGTAAGCATGTACTAACCCAAGCCAGCCTCACG | + |
|
Preference number: 4 (lower is better) Translates to: GTCSSQLLEGPG*SKHVLTQASLT Trigger: CGTGAGGCTGGCTTGGGTTAGTACATGCTTACTCAAGCCTGGCCCCTCAAGCAGCTGTGAGCTGCAGGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| CDS-3UTR TCA 90 bp | TCAGCCAGCGGCCTGCGGCCAGGCAGGCTGAGGACACCTCCCTCCACGGCTCCCGCATCAATTTTCCCTTaGAATGCGTTTTCTAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SASGLRPGRLRTPPSTAPASIFP*NAFSKS Trigger: AGACTTAGAAAACGCATTTCAAGGGAAAATTGATGC...GGGAGCCGTGGAGGGAGGTGTCCTCAGCCTGCCTGGCCGCAGGCCGCTGGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
||
| CDS-3UTR CCA 90 bp | AACTGCAGACGCCTCTGCAGCTCCTCCAGAGCTGCTCTGTACATCACGTCCTGGGCCGTCACCCACTCCTaGAGCTTGATGAGACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NCRRLCSSSRAALYITSWAVTHS*SLMRLS Trigger: GGACAGTCTCATCAAGCTCCAGGAGTGGGTGACGGC...CCAGGACGTGATGTACAGAGCAGCTCTGGAGGAGCTGCAGAGGCGTCTGCAGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| CDS-3UTR GCA 90 bp | TCACAGCTGCTTGAGGGGCCAGGCTTGAGTAAGCATGTACTAACCCAAGCCAGCCGTAGCTGGTCACCTTaGTGGCCTGCTTGCGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SQLLEGPGLSKHVLTQASRSWSP*WPACEG Trigger: ACCCTCGCAAGCAGGCCAGCAAGGTGACCAGCTACG...GCTGGCTTGGGTTAGTACATGCTTACTCAAGCCTGGCCCCTCAAGCAGCTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR GCA 90 bp | ACTTCCAATGTGCCACCTGGATCCCCTTCTCTCCTTGACCTTGTCAGGTTTCGACGCTGCTGCCCAGGCTaGCAGAGCTCTGTGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TSNVPPGSPSLLDLVRFRRCCPG*QSSVPV Trigger: CACAGGCACAGAGCTCTGGCAGCCTGGGCAGCAGCG...TCGAAACCTGACAAGGTCAAGGAGAGAAGGGGATCCAGGTGGCACATTGGAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165321.2 |
||
| CDS-3UTR TCA 90 bp | CACCTGGATCCCCTTCTCTCCTTGACCTTGTCAGGTTTCGAGAAAGAGCATTTGTGCGGTCCTGGTAGTTaGGCGGGAGGGTCTGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HLDPLLSLTLSGFEKEHLCGPGS*AGGSEA Trigger: GGCCTCAGACCCTCCCGCTCAACTACCAGGACCGCA...CAAATGCTCTTTCTCGAAACCTGACAAGGTCAAGGAGAGAAGGGGATCCAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165321.2 |
||
| CDS-3UTR TCA 90 bp | CACGCAAGTCCAGTGGATAACAAGACTTCTTCCAGCAGACACAGTGCTGAACACACATGCCGATGCTGCTaGTGCCGCTGCTGCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HASPVDNKTSSSRHSAEHTCRCC*CRCCPG Trigger: GCCTGGGCAGCAGCGGCATCAGCAGCATCGGCATGT...GTGTTCAGCACTGTGTCTGCTGGAAGAAGTCTTGTTATCCACTGGACTTGCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR TCA 90 bp | ACGCAGGTGAGGGTTACAAACACTGAAGCCAGAGTAAAACAGCCTGTGGACTTTACATGCCGATGCTGCTaGTGCCGCTGCTGCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TQVRVTNTEARVKQPVDFTCRCC*CRCCPG Trigger: GCCTGGGCAGCAGCGGCATCAGCAGCATCGGCATGT...AAAGTCCACAGGCTGTTTTACTCTGGCTTCAGTGTTTGTAACCCTCACCTGCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR TCA 90 bp | TTTCGAGAAAGAGCATTTGGGAAACCCTTGGAGGTAGGGGTTTGTGAAGAAGGCACATGCCGATGCTGCTaGTGCCGCTGCTGCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FRERAFGKPLEVGVCEEGTCRCC*CRCCPG Trigger: GCCTGGGCAGCAGCGGCATCAGCAGCATCGGCATGT...GCCTTCTTCACAAACCCCTACCTCCAAGGGTTTCCCAAATGCTCTTTCTCGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165321.2 |
||
| CDS-3UTR GCA 90 bp | AAAAATGTAAACTTCGGGAGGGAGAGAGGACAGTGTGTGGAGATGACGCGTGGGCGTAGCTGGTCACCTTaGTGGCCTGCTTGCGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KNVNFGRERGQCVEMTRGRSWSP*WPACEG Trigger: ACCCTCGCAAGCAGGCCAGCAAGGTGACCAGCTACG...CCCACGCGTCATCTCCACACACTGTCCTCTCTCCCTCCCGAAGTTTACATTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR CCA 90 bp | AAAAATGTAAACTTCGGGAGGGAGAGAGGACAGTGTGTGGAGATGACGCGTGGGGCAGGTACCGTCGCATaGCCTGCATGTGTTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KNVNFGRERGQCVEMTRGAGTVA*PACVPA Trigger: TGCTGGAACACATGCAGGCCATGCGACGGTACCTGC...CCCACGCGTCATCTCCACACACTGTCCTCTCTCCCTCCCGAAGTTTACATTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
||
| CDS-3UTR TCA 90 bp | GGTAGAAGTGCGTCAATATTCGCAACTGTGAGCACATTTTTGGTATGGAGTCCTTGCGGTCCTGGTAGTTaGGCGGGAGGGTCTGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRSASIFATVSTFLVWSPCGPGS*AGGSEA Trigger: GGCCTCAGACCCTCCCGCTCAACTACCAGGACCGCA...AGGACTCCATACCAAAAATGTGCTCACAGTTGCGAATATTGACGCACTTCTACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| CDS-3UTR TCA 90 bp | CATCATATATCCACCGGTAGAGGAAGCTCAGGACAGGGTGAGACACCAAGCTCAACCCCCTTTTCGTCCTaGGAGTGCAGAACAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HHISTGRGSSGQGETPSSTPFSS*ECRTER Trigger: CCTCTCTGTTCTGCACTCTCAGGACGAAAAGGGGGT...TGAGCTTGGTGTCTCACCCTGTCCTGAGCTTCCTCTACCGGTGGATATATGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| CDS-3UTR GCA 90 bp | TTTCGAGAAAGAGCATTTGGGAAACCCTTGGAGGTAGGGGTTTGTGAAGAAGGCCCGGGAAGGAAAGGCTaGACAGGTGTGGGGCCACTA | + |
|
Preference number: 4 (lower is better) Translates to: FRERAFGKPLEVGVCEEGPGRKG*TGVGPL Trigger: TAGTGGCCCCACACCTGTGCAGCCTTTCCTTCCCGG...GCCTTCTTCACAAACCCCTACCTCCAAGGGTTTCCCAAATGCTCTTTCTCGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165321.2 |
||
| CDS-3UTR GCA 90 bp | TCACAGCTGCTTGAGGGGCCAGGCTTGAGTAAGCATGTACTAACCCAAGCCAGCCTCAGCAAGCCGGACTaGTGTGTCCCTCAAAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: SQLLEGPGLSKHVLTQASLSKPD*CVPQRF Trigger: AAATCTTTGAGGGACACAGCAGTCCGGCTTGCTGAG...GCTGGCTTGGGTTAGTACATGCTTACTCAAGCCTGGCCCCTCAAGCAGCTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR GCA 90 bp | CACGCAAGTCCAGTGGATAACAAGACTTCTTCCAGCAGACACAGTGCTGAACACAACTGCAGACGCCTCTaGAGCTCCTCCAGAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HASPVDNKTSSSRHSAEHNCRRL*SSSRAA Trigger: AGCAGCTCTGGAGGAGCTGCAGAGGCGTCTGCAGTT...GTGTTCAGCACTGTGTCTGCTGGAAGAAGTCTTGTTATCCACTGGACTTGCGTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
||
| CDS-3UTR CCA 90 bp | CACGCTGTTTCTTTTTCTCTTCAAACTGCAGACGCCTCTGCAGCTCCTCCAGAGGCAAACTGGAACTGCTaGGCCACATCAGCTTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HAVSFSLQTADASAAPPEANWNC*ATSASL Trigger: GAGCGAAGCTGATGTGGCCCAGCAGTTCCAGTTTGC...CTCTGGAGGAGCTGCAGAGGCGTCTGCAGTTTGAAGAGAAAAAGAAACAGCGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| CDS-3UTR CCA 90 bp | GTAACTTCCAATGTGCCACCTGGATCCCCTTCTCTCCTTGACCTTGTCAGGTTTGGAGGGTCTGAGGCCTaGCATAGTAGTAAGGCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: VTSNVPPGSPSLLDLVRFGGSEA*HSSKAS Trigger: CGACGCCTTACTACTATGCCAGGCCTCAGACCCTCC...AAACCTGACAAGGTCAAGGAGAGAAGGGGATCCAGGTGGCACATTGGAAGTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165321.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCTCTCCTTGACCTTGTCAGGTTTCGAGAAAGAGCATTTGGGAAACCCTTGGCCGTCACCCACTCCTaGAGCTTGATGAGACCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSLLDLVRFRERAFGKPLAVTHS*SLMRPG Trigger: TCCCGGTCTCATCAAGCTCCAGGAGTGGGTGACGGC...CAAGGGTTTCCCAAATGCTCTTTCTCGAAACCTGACAAGGTCAAGGAGAGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165321.2 |
||
| CDS-3UTR TCA 90 bp | AACTGCAGACGCCTCTGCAGCTCCTCCAGAGCTGCTCTGTACATCACGTCCTGGCAGTGCTGCTCATTTTaGTGTTTTTGCCATCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: NCRRLCSSSRAALYITSWQCCSF*CFCHQC Trigger: GCATTGATGGCAAAAACATCAAAATGAGCAGCACTG...CCAGGACGTGATGTACAGAGCAGCTCTGGAGGAGCTGCAGAGGCGTCTGCAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| CDS-3UTR TCA 90 bp | AAAAATGTAAACTTCGGGAGGGAGAGAGGACAGTGTGTGGAGATGACGCGTGGGAAGCTCAGGACAGGGTaGGACACCAAGCTCAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: KNVNFGRERGQCVEMTRGKLRTG*DTKLRM Trigger: CATTCTGAGCTTGGTGTCTCACCCTGTCCTGAGCTT...CCCACGCGTCATCTCCACACACTGTCCTCTCTCCCTCCCGAAGTTTACATTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
||
| CDS-3UTR TCA 90 bp | AAAAATGTAAACTTCGGGAGGGAGAGAGGACAGTGTGTGGAGATGACGCGTGGGACTGCATCTGGTGGATaGAGTGCACCATCTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KNVNFGRERGQCVEMTRGTASGG*SAPSLR Trigger: CCTCAGAGATGGTGCACTTCATCCACCAGATGCAGT...CCCACGCGTCATCTCCACACACTGTCCTCTCTCCCTCCCGAAGTTTACATTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
||
| CDS-3UTR GCA 90 bp | ACTTATCAGAACTTTGAAAATAAGACAGTCTCAGCCTTGCCTGGTTCAGCCAGCGCTGCCAGAGCTCTGTaGCTGTGTGCTGCGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TYQNFENKTVSALPGSASAARAL*LCAAVL Trigger: CAGGACCGCAGCACACAGGCACAGAGCTCTGGCAGC...GCTGGCTGAACCAGGCAAGGCTGAGACTGTCTTATTTTCAAAGTTCTGATAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR GCA 90 bp | AAAAATGTAAACTTCGGGAGGGAGAGAGGACAGTGTGTGGAGATGACGCGTGGGATCTGGTGGATGAAGTaGACCATCTCTGAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KNVNFGRERGQCVEMTRGIWWMK*TISEAR Trigger: CCTGGCCTCAGAGATGGTGCACTTCATCCACCAGAT...CCCACGCGTCATCTCCACACACTGTCCTCTCTCCCTCCCGAAGTTTACATTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
||
| CDS-3UTR CCA 90 bp | AAGTGGCCTGTTGAACTCAGCAGCGTTACAGACACGCAAGTCCAGTGGATAACATCTGCAGCAGAACGTTaGGCGACTTCTGATCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KWPVELSSVTDTQVQWITSAAER*ATSDPE Trigger: CTCCGGATCAGAAGTCGCCCAACGTTCTGCTGCAGA...TGTTATCCACTGGACTTGCGTGTCTGTAACGCTGCTGAGTTCAACAGGCCACTT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGCAGCGTTACAGACACGCAAGTCCAGTGGATAACAAGACTTCTTCCAGCATCTGCAGCAGAACGTTaGGCGACTTCTGATCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSSVTDTQVQWITRLLPASAAER*ATSDPE Trigger: CTCCGGATCAGAAGTCGCCCAACGTTCTGCTGCAGA...TGCTGGAAGAAGTCTTGTTATCCACTGGACTTGCGTGTCTGTAACGCTGCTGAG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR CCA 90 bp | TCACAGCTGCTTGAGGGGCCAGGCTTGAGTAAGCATGTACTAACCCAAGCCAGCTCGAGAAAGAGCATTTaGGAAACCCTTGGAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SQLLEGPGLSKHVLTQASSRKSI*ETLGGR Trigger: CCTACCTCCAAGGGTTTCCCAAATGCTCTTTCTCGA...GCTGGCTTGGGTTAGTACATGCTTACTCAAGCCTGGCCCCTCAAGCAGCTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR CCA 90 bp | CCAAGCAGCAGGTACCGTCGCATGGCCTGCATGTGTTCCAGCAGACTGTACTTTTCGAGAAAGAGCATTTaGGAAACCCTTGGAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSSRYRRMACMCSSRLYFSRKSI*ETLGGR Trigger: CCTACCTCCAAGGGTTTCCCAAATGCTCTTTCTCGA...AAAGTACAGTCTGCTGGAACACATGCAGGCCATGCGACGGTACCTGCTGCTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| CDS-3UTR TCA 90 bp | ACTTATCAGAACTTTGAAAATAAGACAGTCTCAGCCTTGCCTGGTTCAGCCAGCCTTCCTGTGGAGCTCTaGAAACAGTGCGGCGTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TYQNFENKTVSALPGSASLPVEL*KQCGVR Trigger: GCGGACGCCGCACTGTTTTCAGAGCTCCACAGGAAG...GCTGGCTGAACCAGGCAAGGCTGAGACTGTCTTATTTTCAAAGTTCTGATAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR TCA 90 bp | GGTAGAAGTGCGTCAATATTCGCAACTGTGAGCACATTTTTGGTATGGAGTCCTCTTCCTGTGGAGCTCTaGAAACAGTGCGGCGTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GRSASIFATVSTFLVWSPLPVEL*KQCGVR Trigger: GCGGACGCCGCACTGTTTTCAGAGCTCCACAGGAAG...AGGACTCCATACCAAAAATGTGCTCACAGTTGCGAATATTGACGCACTTCTACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| CDS-3UTR TCA 90 bp | TGCCCTTTCCGGATGTCAGTGAGGATGTACTCCATGCGCTTGGCCCTCCACAGGCAGGAGGTAGAGGATTaGCCATTTATTCTTCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CPFRMSVRMYSMRLALHRQEVED*PFILQN Trigger: GTTTTGAAGAATAAATGGTCAATCCTCTACCTCCTG...CCTGTGGAGGGCCAAGCGCATGGAGTACATCCTCACTGACATCCGGAAAGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| CDS-3UTR TCA 90 bp | AAAAATGTAAACTTCGGGAGGGAGAGAGGACAGTGTGTGGAGATGACGCGTGGGGGAGGTAGGGGTTTGTaGAGAAGGCTGATTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KNVNFGRERGQCVEMTRGGGRGL*RRLISS Trigger: ACTGGAAATCAGCCTTCTTCACAAACCCCTACCTCC...CCCACGCGTCATCTCCACACACTGTCCTCTCTCCCTCCCGAAGTTTACATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR TCA 90 bp | CTCAGCAGCGTTACAGACACGCAAGTCCAGTGGATAACAAGACTTCTTCCAGCAACCTACAAGTCCAAATaGGCGGTCCAGACTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSSVTDTQVQWITRLLPATYKSK*AVQTPL Trigger: CAGAGGAGTCTGGACCGCTCATTTGGACTTGTAGGT...TGCTGGAAGAAGTCTTGTTATCCACTGGACTTGCGTGTCTGTAACGCTGCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR TCA 90 bp | AACAAGACTTCTTCCAGCAGACACAGTGCTGAACACTGGGGCCTGTGTGTAGACGCCTGTAGTATTCTTTaGGCTCTTGGTGCAATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: NKTSSSRHSAEHWGLCVDACSIL*ALGAMR Trigger: CCGCATTGCACCAAGAGCTCAAAGAATACTACAGGC...GTCTACACACAGGCCCCAGTGTTCAGCACTGTGTCTGCTGGAAGAAGTCTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR TCA 90 bp | ACGCAGGTGAGGGTTACAAACACTGAAGCCAGAGTAAAACAGCCTGTGGACTTTTCCGGGCTGTCAAACTaGGCATTGGTGGCTCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: TQVRVTNTEARVKQPVDFSGLSN*ALVALT Trigger: TGTGAGAGCCACCAATGCTCAGTTTGACAGCCCGGA...AAAGTCCACAGGCTGTTTTACTCTGGCTTCAGTGTTTGTAACCCTCACCTGCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
||
| CDS-3UTR GCA 90 bp | AACAAGACTTCTTCCAGCAGACACAGTGCTGAACACTGGGGCCTGTGTGTAGACCTCAGCAAGCCGGACTaGTGTGTCCCTCAAAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: NKTSSSRHSAEHWGLCVDLSKPD*CVPQRF Trigger: AAATCTTTGAGGGACACAGCAGTCCGGCTTGCTGAG...GTCTACACACAGGCCCCAGTGTTCAGCACTGTGTCTGCTGGAAGAAGTCTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR CCA 90 bp | TCACAGCTGCTTGAGGGGCCAGGCTTGAGTAAGCATGTACTAACCCAAGCCAGCCTGAAGCTGAGAAACTaGAGACTTTCATCAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQLLEGPGLSKHVLTQASLKLRN*RLSSEL Trigger: CAGCTCTGATGAAAGTCTCCAGTTTCTCAGCTTCAG...GCTGGCTTGGGTTAGTACATGCTTACTCAAGCCTGGCCCCTCAAGCAGCTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
||
| CDS-3UTR TCA 90 bp | ATCAATGCCCTGGAATACGTAGAGAATATCTCTCACAAGAGCAGCTTCAGTAACCTTCCTGTGGAGCTCTaGAAACAGTGCGGCGTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: INALEYVENISHKSSFSNLPVEL*KQCGVR Trigger: GCGGACGCCGCACTGTTTTCAGAGCTCCACAGGAAG...GTTACTGAAGCTGCTCTTGTGAGAGATATTCTCTACGTATTCCAGGGCATTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172056.2 |
||
| CDS-3UTR TCA 90 bp | CACGCAAGTCCAGTGGATAACAAGACTTCTTCCAGCAGACACAGTGCTGAACACATCCCCTTCTCTCCTTaGCCTTGTCAGGTTTCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HASPVDNKTSSSRHSAEHIPFSP*PCQVSR Trigger: TCTCGAAACCTGACAAGGTCAAGGAGAGAAGGGGAT...GTGTTCAGCACTGTGTCTGCTGGAAGAAGTCTTGTTATCCACTGGACTTGCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR TCA 90 bp | GACACGCAAGTCCAGTGGATAACAAGACTTCTTCCAGCAGACACAGTGCTGAACATCCCCTTCTCTCCTTaGCCTTGTCAGGTTTCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: DTQVQWITRLLPADTVLNIPFSP*PCQVSR Trigger: TCTCGAAACCTGACAAGGTCAAGGAGAGAAGGGGAT...GTTCAGCACTGTGTCTGCTGGAAGAAGTCTTGTTATCCACTGGACTTGCGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR TCA 90 bp | AAGTGGCCTGTTGAACTCAGCAGCGTTACAGACACGCAAGTCCAGTGGATAACAGCCTGTAGTATTCTTTaGGCTCTTGGTGCAATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KWPVELSSVTDTQVQWITACSIL*ALGAMR Trigger: CCGCATTGCACCAAGAGCTCAAAGAATACTACAGGC...TGTTATCCACTGGACTTGCGTGTCTGTAACGCTGCTGAGTTCAACAGGCCACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR TCA 90 bp | CTCAGCAGCGTTACAGACACGCAAGTCCAGTGGATAACAAGACTTCTTCCAGCACCCAAATTCACACCCTaGTCATCTTCTAGCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSSVTDTQVQWITRLLPAPKFTP*SSSSWS Trigger: GCTCCAGCTAGAAGATGATCAGGGTGTGAATTTGGG...TGCTGGAAGAAGTCTTGTTATCCACTGGACTTGCGTGTCTGTAACGCTGCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
||
| CDS-3UTR TCA 90 bp | CTCAGCAGCGTTACAGACACGCAAGTCCAGTGGATAACAAGACTTCTTCCAGCACCATTAAGTGCCGTATaGAGTCTCCTTGGCCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSSVTDTQVQWITRLLPAPLSAV*SLLGQA Trigger: TGCTTGGCCAAGGAGACTTCATACGGCACTTAATGG...TGCTGGAAGAAGTCTTGTTATCCACTGGACTTGCGTGTCTGTAACGCTGCTGAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
||
| CDS-3UTR TCA 90 bp | AAAAATGTAAACTTCGGGAGGGAGAGAGGACAGTGTGTGGAGATGACGCGTGGGCGAGAACCTCAAAGGTaGTGTAGTACTGCATCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KNVNFGRERGQCVEMTRGREPQR*CSTASG Trigger: ACCAGATGCAGTACTACATCACCTTTGAGGTTCTCG...CCCACGCGTCATCTCCACACACTGTCCTCTCTCCCTCCCGAAGTTTACATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
||
| CDS-3UTR GCA 90 bp | TGCGTCAATATTCGCAACTGTGAGCACATTTTTGGTATGGAGTCCTGGAATTCTCGGCAGCACAGGTTCTaGAGCAGAACGTTGGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: CVNIRNCEHIFGMESWNSRQHRF*SRTLGD Trigger: GTCGCCCAACGTTCTGCTGCAGAACCTGTGCTGCCG...AGAATTCCAGGACTCCATACCAAAAATGTGCTCACAGTTGCGAATATTGACGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| CDS-3UTR GCA 90 bp | AAGTGGCCTGTTGAACTCAGCAGCGTTACAGACACGCAAGTCCAGTGGATAACAGAGCTCTTGGTGCAATaGGGCACAAAAACTCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: KWPVELSSVTDTQVQWITELLVQ*GTKTLT Trigger: GGTCAGAGTTTTTGTGCCGCATTGCACCAAGAGCTC...TGTTATCCACTGGACTTGCGTGTCTGTAACGCTGCTGAGTTCAACAGGCCACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR CCA 90 bp | AACAAGACTTCTTCCAGCAGACACAGTGCTGAACACTGGGGCCTGTGTGTAGACATCTCGTTCAACAGTTaGAGCGAAGTTGCTGCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: NKTSSSRHSAEHWGLCVDISFNS*SEVAAD Trigger: ATCGGCAGCAACTTCGCTCCAACTGTTGAACGAGAT...GTCTACACACAGGCCCCAGTGTTCAGCACTGTGTCTGCTGGAAGAAGTCTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGTAGTGATGACCTCACGCAGGTGAGGGTTACAAACACTGAAGCCAGAGTAAGGACCTTCCTAGACTaGTCCATCGTAATGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VGSDDLTQVRVTNTEARVRTFLD*SIVMKE Trigger: CTCCTTCATTACGATGGACCAGTCTAGGAAGGTCCT...TACTCTGGCTTCAGTGTTTGTAACCCTCACCTGCGTGAGGTCATCACTACCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
||
| CDS-3UTR CCA 90 bp | ACTTATCAGAACTTTGAAAATAAGACAGTCTCAGCCTTGCCTGGTTCAGCCAGCATGTGGTCCAGGTCCTaGGCCTGCTGCACTCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TYQNFENKTVSALPGSASMWSRS*ACCTLF Trigger: GAACAGAGTGCAGCAGGCCCAGGACCTGGACCACAT...GCTGGCTGAACCAGGCAAGGCTGAGACTGTCTTATTTTCAAAGTTCTGATAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
||
| CDS-3UTR TCA 90 bp | TCACAGCTGCTTGAGGGGCCAGGCTTGAGTAAGCATGTACTAACCCAAGCCAGCCAGGAGGTAGAGGATTaGCCATTTATTCTTCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SQLLEGPGLSKHVLTQASQEVED*PFILQN Trigger: GTTTTGAAGAATAAATGGTCAATCCTCTACCTCCTG...GCTGGCTTGGGTTAGTACATGCTTACTCAAGCCTGGCCCCTCAAGCAGCTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR TCA 90 bp | ACGCAGGTGAGGGTTACAAACACTGAAGCCAGAGTAAAACAGCCTGTGGACTTTGGAGGTAGGGGTTTGTaGAGAAGGCTGATTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TQVRVTNTEARVKQPVDFGGRGL*RRLISS Trigger: ACTGGAAATCAGCCTTCTTCACAAACCCCTACCTCC...AAAGTCCACAGGCTGTTTTACTCTGGCTTCAGTGTTTGTAACCCTCACCTGCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR TCA 90 bp | AAACTGCAGACGCCTCTGCAGCTCCTCCAGAGCTGCTCTGTACATCACGTCCTGGGTCAGCATACTTTCTaGTTTTATTATGCAACCATC | + |
|
Preference number: 4 (lower is better) Translates to: KLQTPLQLLQSCSVHHVLGQHTF*FYYATI Trigger: GATGGTTGCATAATAAAATCAGAAAGTATGCTGACC...CAGGACGTGATGTACAGAGCAGCTCTGGAGGAGCTGCAGAGGCGTCTGCAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| CDS-3UTR TCA 90 bp | AAGTGGCCTGTTGAACTCAGCAGCGTTACAGACACGCAAGTCCAGTGGATAACAGCGGCACAAAAACTCTaGCCTACAAGTCCAAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: KWPVELSSVTDTQVQWITAAQKL*PTSPNE Trigger: CTCATTTGGACTTGTAGGTCAGAGTTTTTGTGCCGC...TGTTATCCACTGGACTTGCGTGTCTGTAACGCTGCTGAGTTCAACAGGCCACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR TCA 90 bp | CACGCAAGTCCAGTGGATAACAAGACTTCTTCCAGCAGACACAGTGCTGAACACCCCGTCAAGTTATGCTaGTACAAAGTTGTTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HASPVDNKTSSSRHSAEHPVKLC*YKVVAG Trigger: GCCAGCAACAACTTTGTATCAGCATAACTTGACGGG...GTGTTCAGCACTGTGTCTGCTGGAAGAAGTCTTGTTATCCACTGGACTTGCGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
||
| CDS-3UTR CCA 90 bp | AAGTGGCCTGTTGAACTCAGCAGCGTTACAGACACGCAAGTCCAGTGGATAACACGGTCCAGACTCCTCTaGTCAGCATACTTTCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: KWPVELSSVTDTQVQWITRSRLL*SAYFLI Trigger: AATCAGAAAGTATGCTGACCAGAGGAGTCTGGACCG...TGTTATCCACTGGACTTGCGTGTCTGTAACGCTGCTGAGTTCAACAGGCCACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR CCA 90 bp | TCACAGCTGCTTGAGGGGCCAGGCTTGAGTAAGCATGTACTAACCCAAGCCAGCATACAAAGTTGTTGCTaGCCGAACAAGTTCTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SQLLEGPGLSKHVLTQASIQSCC*PNKFWF Trigger: AAACCAGAACTTGTTCGGCCAGCAACAACTTTGTAT...GCTGGCTTGGGTTAGTACATGCTTACTCAAGCCTGGCCCCTCAAGCAGCTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
||
| CDS-3UTR CCA 90 bp | GTGGGTAGTGATGACCTCACGCAGGTGAGGGTTACAAACACTGAAGCCAGAGTACAAACTGAGCATTGGTaGCTCTCACAGCAGTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VGSDDLTQVRVTNTEARVQTEHW*LSQQFQ Trigger: TTGAAACTGCTGTGAGAGCCACCAATGCTCAGTTTG...TACTCTGGCTTCAGTGTTTGTAACCCTCACCTGCGTGAGGTCATCACTACCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
||
| CDS-3UTR CCA 90 bp | CTCAGCAGCGTTACAGACACGCAAGTCCAGTGGATAACAAGACTTCTTCCAGCAAACACGGCTCTCAGTTaGTTTAAAAGCACCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSSVTDTQVQWITRLLPANTALS*FKSTLE Trigger: CTCCAGGGTGCTTTTAAACCAACTGAGAGCCGTGTT...TGCTGGAAGAAGTCTTGTTATCCACTGGACTTGCGTGTCTGTAACGCTGCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
||
| CDS-3UTR TCA 90 bp | TACAGACACGCAAGTCCAGTGGATAACAAGACTTCTTCCAGCAGACACAGTGCTGCGGCACAAAAACTCTaGCCTACAAGTCCAAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: YRHASPVDNKTSSSRHSAAAQKL*PTSPNE Trigger: CTCATTTGGACTTGTAGGTCAGAGTTTTTGTGCCGC...AGCACTGTGTCTGCTGGAAGAAGTCTTGTTATCCACTGGACTTGCGTGTCTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTGTTGTTGTTGAAATATAAATTACACGGTGGAAATAAGATGTCCCAGCACCGCTGCTGCCCAGGCTaGCAGAGCTCTGTGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLLLLKYKLHGGNKMSQHRCCPG*QSSVPV Trigger: CACAGGCACAGAGCTCTGGCAGCCTGGGCAGCAGCG...GTGCTGGGACATCTTATTTCCACCGTGTAATTTATATTTCAACAACAACAAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR GCA 90 bp | CTCAGCAGCGTTACAGACACGCAAGTCCAGTGGATAACAAGACTTCTTCCAGCACTGATACAAAGTTGTTaGTGGCCGAACAAGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSSVTDTQVQWITRLLPALIQSC*WPNKFW Trigger: CCAGAACTTGTTCGGCCAGCAACAACTTTGTATCAG...TGCTGGAAGAAGTCTTGTTATCCACTGGACTTGCGTGTCTGTAACGCTGCTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
||
| CDS-3UTR CCA 90 bp | ACAAACACTGAAGCCAGAGTAAAACAGCCTGTGGACTTTCTTAGACATGTTTCAGGAGGGTCTGAGGCCTaGCATAGTAGTAAGGCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: TNTEARVKQPVDFLRHVSGGSEA*HSSKAS Trigger: CGACGCCTTACTACTATGCCAGGCCTCAGACCCTCC...TGAAACATGTCTAAGAAAGTCCACAGGCTGTTTTACTCTGGCTTCAGTGTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR CCA 90 bp | ACAAACACTGAAGCCAGAGTAAAACAGCCTGTGGACTTTCTTAGACATGTTTCAGCCGTCACCCACTCCTaGAGCTTGATGAGACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TNTEARVKQPVDFLRHVSAVTHS*SLMRLS Trigger: GGACAGTCTCATCAAGCTCCAGGAGTGGGTGACGGC...TGAAACATGTCTAAGAAAGTCCACAGGCTGTTTTACTCTGGCTTCAGTGTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR CCA 90 bp | GACACGCAAGTCCAGTGGATAACAAGACTTCTTCCAGCAGACACAGTGCTGAACTTTGGTATGGAGTCCTaGAATTCTCGGATCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DTQVQWITRLLPADTVLNFGMES*NSRILL Trigger: CAAGAGGATCCGAGAATTCCAGGACTCCATACCAAA...GTTCAGCACTGTGTCTGCTGGAAGAAGTCTTGTTATCCACTGGACTTGCGTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
||
| CDS-3UTR TCA 90 bp | TACAGACACGCAAGTCCAGTGGATAACAAGACTTCTTCCAGCAGACACAGTGCTCGTTTTCTAAGTCTGTaGATAAATCCGCAGCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: YRHASPVDNKTSSSRHSARFLSL*INPQRH Trigger: GTGACGCTGCGGATTTATTCACAGACTTAGAAAACG...AGCACTGTGTCTGCTGGAAGAAGTCTTGTTATCCACTGGACTTGCGTGTCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
||
| CDS-3UTR TCA 90 bp | ACGCAGGTGAGGGTTACAAACACTGAAGCCAGAGTAAAACAGCCTGTGGACTTTACGTCCTGGGCATTCTaGAGTTCAATGATTTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TQVRVTNTEARVKQPVDFTSWAF*SSMIWS Trigger: TGACCAAATCATTGAACTTCAGAATGCCCAGGACGT...AAAGTCCACAGGCTGTTTTACTCTGGCTTCAGTGTTTGTAACCCTCACCTGCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
||
| CDS-3UTR TCA 90 bp | GTGGGTAGTGATGACCTCACGCAGGTGAGGGTTACAAACACTGAAGCCAGAGTACAATATTCGCAACTGTaGGCACATTTTTGGTATGGA | + |
|
Preference number: 4 (lower is better) Translates to: VGSDDLTQVRVTNTEARVQYSQL*AHFWYG Trigger: TCCATACCAAAAATGTGCTCACAGTTGCGAATATTG...TACTCTGGCTTCAGTGTTTGTAACCCTCACCTGCGTGAGGTCATCACTACCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
||
| CDS-3UTR GCA 90 bp | GATTTCTTCCTAACACTTATCAGAACTTTGAAAATAAGACAGTCTCAGCCTTGCCGGCAGCACAGGTTCTaGAGCAGAACGTTGGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: DFFLTLIRTLKIRQSQPCRQHRF*SRTLGD Trigger: GTCGCCCAACGTTCTGCTGCAGAACCTGTGCTGCCG...GCAAGGCTGAGACTGTCTTATTTTCAAAGTTCTGATAAGTGTTAGGAAGAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR GCA 90 bp | AAGTGGCCTGTTGAACTCAGCAGCGTTACAGACACGCAAGTCCAGTGGATAACAAGCAAATCCATTAAGTaGCGTATGAAGTCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KWPVELSSVTDTQVQWITSKSIK*RMKSPW Trigger: CCAAGGAGACTTCATACGGCACTTAATGGATTTGCT...TGTTATCCACTGGACTTGCGTGTCTGTAACGCTGCTGAGTTCAACAGGCCACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
||
| CDS-3UTR CCA 90 bp | CATCATATATCCACCGGTAGAGGAAGCTCAGGACAGGGTGAGACACCAAGCTCATATTCTTTGAGCTCTTaGTGCAATGCGGCACAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HHISTGRGSSGQGETPSSYSLSS*CNAAQK Trigger: TTTTTGTGCCGCATTGCACCAAGAGCTCAAAGAATA...TGAGCTTGGTGTCTCACCCTGTCCTGAGCTTCCTCTACCGGTGGATATATGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| CDS-3UTR TCA 90 bp | ACGCAGGTGAGGGTTACAAACACTGAAGCCAGAGTAAAACAGCCTGTGGACTTTCAGTGCTGCTCATTTTaGTGTTTTTGCCATCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: TQVRVTNTEARVKQPVDFQCCSF*CFCHQC Trigger: GCATTGATGGCAAAAACATCAAAATGAGCAGCACTG...AAAGTCCACAGGCTGTTTTACTCTGGCTTCAGTGTTTGTAACCCTCACCTGCGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR CCA 90 bp | GATTTCTTCCTAACACTTATCAGAACTTTGAAAATAAGACAGTCTCAGCCTTGCGGAGGGTCTGAGGCCTaGCATAGTAGTAAGGCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: DFFLTLIRTLKIRQSQPCGGSEA*HSSKAS Trigger: CGACGCCTTACTACTATGCCAGGCCTCAGACCCTCC...GCAAGGCTGAGACTGTCTTATTTTCAAAGTTCTGATAAGTGTTAGGAAGAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
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| CDS-3UTR CCA 90 bp | CACGCAAGTCCAGTGGATAACAAGACTTCTTCCAGCAGACACAGTGCTGAACACTATTCTTTGAGCTCTTaGTGCAATGCGGCACAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HASPVDNKTSSSRHSAEHYSLSS*CNAAQK Trigger: TTTTTGTGCCGCATTGCACCAAGAGCTCAAAGAATA...GTGTTCAGCACTGTGTCTGCTGGAAGAAGTCTTGTTATCCACTGGACTTGCGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| 3UTR CAA 72 bp | ATGAAGGAGGGGATCATTGACTTCCTCAGGGTATACTaGTCGTGCCATAGACGGTCAGTTTTAACTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: MKEGIIDFLRVY*SCHRRSVLTVG Trigger: TCCAACAGTTAAAACTGACCGTCTATGGCACGACAAGTATACCCTGAGGAAGTCAATGATCCCCTCCTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGTAGTGATGACCTCACGCAGGTGAGGGTTACAAACACTGAAGCCAGAGTATTTCTGATTTTATTATaGAACCATCCCAACTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VGSDDLTQVRVTNTEARVFLILL*NHPNSA Trigger: TGCTGAGTTGGGATGGTTGCATAATAAAATCAGAAA...TACTCTGGCTTCAGTGTTTGTAACCCTCACCTGCGTGAGGTCATCACTACCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR GCA 90 bp | GATTTCTTCCTAACACTTATCAGAACTTTGAAAATAAGACAGTCTCAGCCTTGCTACCGTCGCATGGCCTaGATGTGTTCCAGCAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: DFFLTLIRTLKIRQSQPCYRRMA*MCSSRL Trigger: CAGTCTGCTGGAACACATGCAGGCCATGCGACGGTA...GCAAGGCTGAGACTGTCTTATTTTCAAAGTTCTGATAAGTGTTAGGAAGAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
||
| CDS-3UTR CCA 90 bp | GATTTCTTCCTAACACTTATCAGAACTTTGAAAATAAGACAGTCTCAGCCTTGCGCAAACTGGAACTGCTaGGCCACATCAGCTTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DFFLTLIRTLKIRQSQPCANWNC*ATSASL Trigger: GAGCGAAGCTGATGTGGCCCAGCAGTTCCAGTTTGC...GCAAGGCTGAGACTGTCTTATTTTCAAAGTTCTGATAAGTGTTAGGAAGAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR CCA 90 bp | AAGTGGCCTGTTGAACTCAGCAGCGTTACAGACACGCAAGTCCAGTGGATAACACCAACAGATATTTGCTaGTCTCAAAATAAGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KWPVELSSVTDTQVQWITPTDIC*SQNKQH Trigger: ATGCTGCTTATTTTGAGACCAGCAAATATCTGTTGG...TGTTATCCACTGGACTTGCGTGTCTGTAACGCTGCTGAGTTCAACAGGCCACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
||
| 3UTR CAA 72 bp | AGAAGTGCGTCAATATTCGCAACTGTGAGCACATTTTaGGTATGGAGTCCTGGAATTCTCGGATCCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RSASIFATVSTF*VWSPGILGSSC Trigger: ACAAGAGGATCCGAGAATTCCAGGACTCCATACCAAAAATGTGCTCACAGTTGCGAATATTGACGCACTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| CDS-3UTR TCA 90 bp | ACAAACACTGAAGCCAGAGTAAAACAGCCTGTGGACTTTCTTAGACATGTTTCAGTTTGTGAAGAAGGCTaGTTTCCAGTCAGAGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TNTEARVKQPVDFLRHVSVCEEG*FPVRVH Trigger: GTGGACTCTGACTGGAAATCAGCCTTCTTCACAAAC...TGAAACATGTCTAAGAAAGTCCACAGGCTGTTTTACTCTGGCTTCAGTGTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR TCA 90 bp | AGTTTGTTGTTGTTGAAATATAAATTACACGGTGGAAATAAGATGTCCCAGCACCGTGGTAATCCAGGCTaGAGACATCCCACCCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLLLLKYKLHGGNKMSQHRGNPG*RHPTQC Trigger: ACACTGGGTGGGATGTCTTCAGCCTGGATTACCACG...GTGCTGGGACATCTTATTTCCACCGTGTAATTTATATTTCAACAACAACAAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
||
| CDS-3UTR GCA 90 bp | GATTTCTTCCTAACACTTATCAGAACTTTGAAAATAAGACAGTCTCAGCCTTGCACCAAGCTCAGAATGTaGTGCACCAGGGACTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: DFFLTLIRTLKIRQSQPCTKLRM*CTRDFM Trigger: CATGAAGTCCCTGGTGCAGCACATTCTGAGCTTGGT...GCAAGGCTGAGACTGTCTTATTTTCAAAGTTCTGATAAGTGTTAGGAAGAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
||
| CDS-3UTR GCA 90 bp | ACTTATCAGAACTTTGAAAATAAGACAGTCTCAGCCTTGCCTGGTTCAGCCAGCTTTCTGATTTTATTATaGAACCATCCCAACTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TYQNFENKTVSALPGSASFLILL*NHPNSA Trigger: TGCTGAGTTGGGATGGTTGCATAATAAAATCAGAAA...GCTGGCTGAACCAGGCAAGGCTGAGACTGTCTTATTTTCAAAGTTCTGATAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTGTTGTTGTTGAAATATAAATTACACGGTGGAAATAAGATGTCCCAGCACCGGTCCAGACTCCTCTaGTCAGCATACTTTCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: SLLLLKYKLHGGNKMSQHRSRLL*SAYFLI Trigger: AATCAGAAAGTATGCTGACCAGAGGAGTCTGGACCG...GTGCTGGGACATCTTATTTCCACCGTGTAATTTATATTTCAACAACAACAAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR TCA 90 bp | GATTTCTTCCTAACACTTATCAGAACTTTGAAAATAAGACAGTCTCAGCCTTGCGGTCAGCATACTTTCTaGTTTTATTATGCAACCATC | + |
|
Preference number: 4 (lower is better) Translates to: DFFLTLIRTLKIRQSQPCGQHTF*FYYATI Trigger: GATGGTTGCATAATAAAATCAGAAAGTATGCTGACC...GCAAGGCTGAGACTGTCTTATTTTCAAAGTTCTGATAAGTGTTAGGAAGAAATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
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| CDS CCA 90 bp | CGCCAGACGAGGCCCCAACTGCTGTCGCAGGCCGTCACCCACTCCTaGAGCTTGATGAGACTGTCCGGGAAGGAAAGGCTGCACAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RQTRPQLLSQAVTHS*SLMRLSGKERLHRC Trigger: ACACCTGTGCAGCCTTTCCTTCCCGGACAGTCTCATCAAGCTCCAGGAGTGGGTGACGGCCTGCGACAGCAGTTGGGGCCTCGTCTGGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS TCA 90 bp | CCAGGCTGCCAGAGCTCTGTGCCTGTGTGCTGCGGTCCTGGTAGTTaGGCGGGAGGGTCTGAGGCCTGGCATAGTAGTAAGGCGTCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: PGCQSSVPVCCGPGS*AGGSEAWHSSKASS Trigger: ACTCGACGCCTTACTACTATGCCAGGCCTCAGACCCTCCCGCTCAACTACCAGGACCGCAGCACACAGGCACAGAGCTCTGGCAGCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 ENSMUST00000165321.2 |
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| CDS-3UTR CAA 90 bp | TCAGCCAGCGGCCTGCGGCCAGGCAGGCTGAGGACACCTCCCTCCACGGCTCCCGTGTCCCTCAAAGATTaGTTTAAGTTTGCCTTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: SASGLRPGRLRTPPSTAPVSLKD*FKFAFA Trigger: AGCGAAGGCAAACTTAAACAAATCTTTGAGGGACAC...GGGAGCCGTGGAGGGAGGTGTCCTCAGCCTGCCTGGCCGCAGGCCGCTGGCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
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| CDS-3UTR CAA 90 bp | TCAGCCAGCGGCCTGCGGCCAGGCAGGCTGAGGACACCTCCCTCCACGGCTCCCCGAACAAGTTCTGGTTaGAGCAAATCCATTAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SASGLRPGRLRTPPSTAPRTSSG*SKSIKC Trigger: GCACTTAATGGATTTGCTCAAACCAGAACTTGTTCG...GGGAGCCGTGGAGGGAGGTGTCCTCAGCCTGCCTGGCCGCAGGCCGCTGGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
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| CDS-3UTR CAA 90 bp | TCACAGCTGCTTGAGGGGCCAGGCTTGAGTAAGCATGTACTAACCCAAGCCAGCACCTTGCTGGCCTGCTaGCGAGGGTCCTCACTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SQLLEGPGLSKHVLTQASTLLAC*RGSSLR Trigger: CCTTAGTGAGGACCCTCGCAAGCAGGCCAGCAAGGT...GCTGGCTTGGGTTAGTACATGCTTACTCAAGCCTGGCCCCTCAAGCAGCTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
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| CDS-3UTR CAA 90 bp | AACTGCAGACGCCTCTGCAGCTCCTCCAGAGCTGCTCTGTACATCACGTCCTGGAGGGGTCCCCTGTCTTaGTATAGGCATGAACAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: NCRRLCSSSRAALYITSWRGPLS*YRHEQQ Trigger: CTGCTGTTCATGCCTATACAAAGACAGGGGACCCCT...CCAGGACGTGATGTACAGAGCAGCTCTGGAGGAGCTGCAGAGGCGTCTGCAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| CDS-3UTR CAA 90 bp | CCAGTGGATAACAAGACTTCTTCCAGCAGACACAGTGCTGAACACTGGGGCCTGCTCAGCAGCTTCGCGTaGCACATGTGCCCTTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: PVDNKTSSSRHSAEHWGLLSSFA*HMCPFR Trigger: CCGGAAAGGGCACATGTGCAACGCGAAGCTGCTGAG...CAGGCCCCAGTGTTCAGCACTGTGTCTGCTGGAAGAAGTCTTGTTATCCACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
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| CDS-3UTR CAA 90 bp | CCAGTGGATAACAAGACTTCTTCCAGCAGACACAGTGCTGAACACTGGGGCCTGCCGTATGAAGTCTCCTaGGCCAAGCAGCAGGTACCG | + |
|
Preference number: 5 (lower is better) Translates to: PVDNKTSSSRHSAEHWGLPYEVS*AKQQVP Trigger: CGGTACCTGCTGCTTGGCCAAGGAGACTTCATACGG...CAGGCCCCAGTGTTCAGCACTGTGTCTGCTGGAAGAAGTCTTGTTATCCACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
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| CDS-3UTR CAA 90 bp | AACAAGACTTCTTCCAGCAGACACAGTGCTGAACACTGGGGCCTGTGTGTAGACACCCACTCCTGGAGCTaGATGAGACTGTCCGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NKTSSSRHSAEHWGLCVDTHSWS*MRLSGK Trigger: CTTCCCGGACAGTCTCATCAAGCTCCAGGAGTGGGT...GTCTACACACAGGCCCCAGTGTTCAGCACTGTGTCTGCTGGAAGAAGTCTTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
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| CDS-3UTR CAA 90 bp | AACAAGACTTCTTCCAGCAGACACAGTGCTGAACACTGGGGCCTGTGTGTAGACACCCCCTTTTCGTCCTaGGCAGTGATCTACCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: NKTSSSRHSAEHWGLCVDTPFSS*AVIYQR Trigger: GCGCTGGTAGATCACTGCCAAGGACGAAAAGGGGGT...GTCTACACACAGGCCCCAGTGTTCAGCACTGTGTCTGCTGGAAGAAGTCTTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
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| CDS-3UTR CAA 90 bp | CACGCAAGTCCAGTGGATAACAAGACTTCTTCCAGCAGACACAGTGCTGAACACACCCACTCCTGGAGCTaGATGAGACTGTCCGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HASPVDNKTSSSRHSAEHTHSWS*MRLSGK Trigger: CTTCCCGGACAGTCTCATCAAGCTCCAGGAGTGGGT...GTGTTCAGCACTGTGTCTGCTGGAAGAAGTCTTGTTATCCACTGGACTTGCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR CAA 90 bp | AAACTGCAGACGCCTCTGCAGCTCCTCCAGAGCTGCTCTGTACATCACGTCCTGCTTCTCTCCTTGACCTaGTCAGGTTTCGAGAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KLQTPLQLLQSCSVHHVLLLSLT*SGFEKE Trigger: CTCTTTCTCGAAACCTGACAAGGTCAAGGAGAGAAG...CAGGACGTGATGTACAGAGCAGCTCTGGAGGAGCTGCAGAGGCGTCTGCAGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| CDS-3UTR CAA 90 bp | AACAAGACTTCTTCCAGCAGACACAGTGCTGAACACTGGGGCCTGTGTGTAGACCATCTCGTTCAACAGTaGGAGCGAAGTTGCTGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: NKTSSSRHSAEHWGLCVDHLVQQ*ERSCCR Trigger: TCGGCAGCAACTTCGCTCCAACTGTTGAACGAGATG...GTCTACACACAGGCCCCAGTGTTCAGCACTGTGTCTGCTGGAAGAAGTCTTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
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| CDS-3UTR CAA 90 bp | TGCCACCTGGATCCCCTTCTCTCCTTGACCTTGTCAGGTTTCGAGAAAGAGCATCATCTCGTTCAACAGTaGGAGCGAAGTTGCTGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: CHLDPLLSLTLSGFEKEHHLVQQ*ERSCCR Trigger: TCGGCAGCAACTTCGCTCCAACTGTTGAACGAGATG...ATGCTCTTTCTCGAAACCTGACAAGGTCAAGGAGAGAAGGGGATCCAGGTGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172056.2 |
||
| CDS-3UTR CAA 90 bp | AAGTGGCCTGTTGAACTCAGCAGCGTTACAGACACGCAAGTCCAGTGGATAACACATCTCGTTCAACAGTaGGAGCGAAGTTGCTGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: KWPVELSSVTDTQVQWITHLVQQ*ERSCCR Trigger: TCGGCAGCAACTTCGCTCCAACTGTTGAACGAGATG...TGTTATCCACTGGACTTGCGTGTCTGTAACGCTGCTGAGTTCAACAGGCCACTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR CAA 90 bp | GGTAGAAGTGCGTCAATATTCGCAACTGTGAGCACATTTTTGGTATGGAGTCCTACCTTGCTGGCCTGCTaGCGAGGGTCCTCACTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GRSASIFATVSTFLVWSPTLLAC*RGSSLR Trigger: CCTTAGTGAGGACCCTCGCAAGCAGGCCAGCAAGGT...AGGACTCCATACCAAAAATGTGCTCACAGTTGCGAATATTGACGCACTTCTACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| CDS GCA 90 bp | GAGCGGTCCAGACTCCTCTGGTCAGCATACTTTCTGATTTTATTATaGAACCATCCCAACTCAGCAAGCCGGACTGCTGTGTCCCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: ERSRLLWSAYFLILL*NHPNSASRTAVSLK Trigger: TTTGAGGGACACAGCAGTCCGGCTTGCTGAGTTGGGATGGTTGCATAATAAAATCAGAAAGTATGCTGACCAGAGGAGTCTGGACCGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR CAA 90 bp | GTGGGTAGTGATGACCTCACGCAGGTGAGGGTTACAAACACTGAAGCCAGAGTACTTCTCTCCTTGACCTaGTCAGGTTTCGAGAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VGSDDLTQVRVTNTEARVLLSLT*SGFEKE Trigger: CTCTTTCTCGAAACCTGACAAGGTCAAGGAGAGAAG...TACTCTGGCTTCAGTGTTTGTAACCCTCACCTGCGTGAGGTCATCACTACCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR CAA 90 bp | AAACTGCAGACGCCTCTGCAGCTCCTCCAGAGCTGCTCTGTACATCACGTCCTGTCAGTGCTGCTCATTTaGATGTTTTTGCCATCAATG | + |
|
Preference number: 5 (lower is better) Translates to: KLQTPLQLLQSCSVHHVLSVLLI*MFLPSM Trigger: CATTGATGGCAAAAACATCAAAATGAGCAGCACTGA...CAGGACGTGATGTACAGAGCAGCTCTGGAGGAGCTGCAGAGGCGTCTGCAGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
||
| CDS-3UTR CAA 90 bp | AGGTTTCGAGAAAGAGCATTTGGGAAACCCTTGGAGGTAGGGGTTTGTGAAGAAACCCACTCCTGGAGCTaGATGAGACCGGGAAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RFRERAFGKPLEVGVCEETHSWS*MRPGRK Trigger: TTTCCTTCCCGGTCTCATCAAGCTCCAGGAGTGGGT...TTCTTCACAAACCCCTACCTCCAAGGGTTTCCCAAATGCTCTTTCTCGAAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165321.2 |
||
| CDS TCA 90 bp | CTGCTTGCGAGGGTCCTCACTAAGGTTCAGCAGGAGGTAGAGGATTaGCCATTTATTCTTCAAAACTCCCTGCGAATGAAGCTTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLARVLTKVQQEVED*PFILQNSLRMKLPV Trigger: CACAGGAAGCTTCATTCGCAGGGAGTTTTGAAGAATAAATGGTCAATCCTCTACCTCCTGCTGAACCTTAGTGAGGACCCTCGCAAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS TCA 90 bp | CAAGTCCAAATGAGCGGTCCAGACTCCTCTGGTCAGCATACTTTCTaGTTTTATTATGCAACCATCCCAACTCAGCAAGCCGGACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QVQMSGPDSSGQHTF*FYYATIPTQQAGLL Trigger: CAGCAGTCCGGCTTGCTGAGTTGGGATGGTTGCATAATAAAATCAGAAAGTATGCTGACCAGAGGAGTCTGGACCGCTCATTTGGACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR CAA 90 bp | TCACAGCTGCTTGAGGGGCCAGGCTTGAGTAAGCATGTACTAACCCAAGCCAGCTCAGTGCTGCTCATTTaGATGTTTTTGCCATCAATG | + |
|
Preference number: 5 (lower is better) Translates to: SQLLEGPGLSKHVLTQASSVLLI*MFLPSM Trigger: CATTGATGGCAAAAACATCAAAATGAGCAGCACTGA...GCTGGCTTGGGTTAGTACATGCTTACTCAAGCCTGGCCCCTCAAGCAGCTGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
||
| CDS-3UTR CAA 90 bp | AGGTTTCGAGAAAGAGCATTTGGGAAACCCTTGGAGGTAGGGGTTTGTGAAGAAACCCACTCCTGGAGCTaGATGAGACTGTCTGCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: RFRERAFGKPLEVGVCEETHSWS*MRLSAN Trigger: ATTCGCAGACAGTCTCATCAAGCTCCAGGAGTGGGT...TTCTTCACAAACCCCTACCTCCAAGGGTTTCCCAAATGCTCTTTCTCGAAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172056.2 |
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| CDS TCA 90 bp | ATCTTATTTTGGGGTCATATGTCCAAACCAGGAGGCGCCGCAGTGTaGGGCTACTCTCTAGTCCCAAATTCACACCCTGATCATCTTCTA | + |
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Preference number: 5 (lower is better) Translates to: ILFWGHMSKPGGAAV*GYSLVPNSHPDHLL Trigger: TAGAAGATGATCAGGGTGTGAATTTGGGACTAGAGAGTAGCCTCACACTGCGGCGCCTCCTGGTTTGGACATATGACCCCAAAATAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
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| CDS-3UTR CAA 90 bp | CATCATATATCCACCGGTAGAGGAAGCTCAGGACAGGGTGAGACACCAAGCTCAGTGTCCCTCAAAGATTaGTTTAAGTTTGCCTTCGCT | + |
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Preference number: 5 (lower is better) Translates to: HHISTGRGSSGQGETPSSVSLKD*FKFAFA Trigger: AGCGAAGGCAAACTTAAACAAATCTTTGAGGGACAC...TGAGCTTGGTGTCTCACCCTGTCCTGAGCTTCCTCTACCGGTGGATATATGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164774.8 |
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| CDS-3UTR CAA 90 bp | AACAAGACTTCTTCCAGCAGACACAGTGCTGAACACTGGGGCCTGTGTGTAGACACTGTGAGCACATTTTaGGTATGGAGTCCTGGAATT | + |
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Preference number: 5 (lower is better) Translates to: NKTSSSRHSAEHWGLCVDTVSTF*VWSPGI Trigger: AATTCCAGGACTCCATACCAAAAATGTGCTCACAGT...GTCTACACACAGGCCCCAGTGTTCAGCACTGTGTCTGCTGGAAGAAGTCTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
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| CDS TCA 90 bp | TTTATTCTTCAAAACTCCCTGCGAATGAAGCTTCCTGTGGAGCTCTaGAAACAGTGCGGCGTCCGCTTCTCTCCTTTGTCGAATAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: FILQNSLRMKLPVEL*KQCGVRFSPLSNKF Trigger: GAACTTATTCGACAAAGGAGAGAAGCGGACGCCGCACTGTTTTCAGAGCTCCACAGGAAGCTTCATTCGCAGGGAGTTTTGAAGAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
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| CDS-3UTR CAA 90 bp | AACAAGACTTCTTCCAGCAGACACAGTGCTGAACACTGGGGCCTGTGTGTAGACGCAGGAGGTAGAGGATaGACCATTTATTCTTCAAAA | + |
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Preference number: 5 (lower is better) Translates to: NKTSSSRHSAEHWGLCVDAGGRG*TIYSSK Trigger: TTTTGAAGAATAAATGGTCAATCCTCTACCTCCTGC...GTCTACACACAGGCCCCAGTGTTCAGCACTGTGTCTGCTGGAAGAAGTCTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
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| CDS TCA 90 bp | CTCTTGGTGCAATGCGGCACAAAAACTCTGACCTACAAGTCCAAATaGGCGGTCCAGACTCCTCTGGTCAGCATACTTTCTGATTTTATT | + |
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Preference number: 5 (lower is better) Translates to: LLVQCGTKTLTYKSK*AVQTPLVSILSDFI Trigger: AATAAAATCAGAAAGTATGCTGACCAGAGGAGTCTGGACCGCTCATTTGGACTTGTAGGTCAGAGTTTTTGTGCCGCATTGCACCAAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
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| CDS-3UTR CAA 90 bp | CACGCAAGTCCAGTGGATAACAAGACTTCTTCCAGCAGACACAGTGCTGAACACCTCATTTTGATGTTTTaGCCATCAATGCCCTGGAAT | + |
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Preference number: 5 (lower is better) Translates to: HASPVDNKTSSSRHSAEHLILMF*PSMPWN Trigger: ATTCCAGGGCATTGATGGCAAAAACATCAAAATGAG...GTGTTCAGCACTGTGTCTGCTGGAAGAAGTCTTGTTATCCACTGGACTTGCGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
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| CDS-3UTR CAA 90 bp | GACACGCAAGTCCAGTGGATAACAAGACTTCTTCCAGCAGACACAGTGCTGAACCTCATTTTGATGTTTTaGCCATCAATGCCCTGGAAT | + |
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Preference number: 5 (lower is better) Translates to: DTQVQWITRLLPADTVLNLILMF*PSMPWN Trigger: ATTCCAGGGCATTGATGGCAAAAACATCAAAATGAG...GTTCAGCACTGTGTCTGCTGGAAGAAGTCTTGTTATCCACTGGACTTGCGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
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| CDS-3UTR CAA 90 bp | AAAAATGTAAACTTCGGGAGGGAGAGAGGACAGTGTGTGGAGATGACGCGTGGGAAGATTTGTTTAAGTTaGCCTTCGCTTCCACTTTGT | + |
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Preference number: 5 (lower is better) Translates to: KNVNFGRERGQCVEMTRGKICLS*PSLPLC Trigger: ACAAAGTGGAAGCGAAGGCAAACTTAAACAAATCTT...CCCACGCGTCATCTCCACACACTGTCCTCTCTCCCTCCCGAAGTTTACATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
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| CDS-3UTR CAA 90 bp | ACAAACACTGAAGCCAGAGTAAAACAGCCTGTGGACTTTCTTAGACATGTTTCAAGGGGTCCCCTGTCTTaGTATAGGCATGAACAGCAG | + |
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Preference number: 5 (lower is better) Translates to: TNTEARVKQPVDFLRHVSRGPLS*YRHEQQ Trigger: CTGCTGTTCATGCCTATACAAAGACAGGGGACCCCT...TGAAACATGTCTAAGAAAGTCCACAGGCTGTTTTACTCTGGCTTCAGTGTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
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| CDS-3UTR CAA 90 bp | ACGCAGGTGAGGGTTACAAACACTGAAGCCAGAGTAAAACAGCCTGTGGACTTTTATGCTGATACAAAGTaGTTGCTGGCCGAACAAGTT | + |
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Preference number: 5 (lower is better) Translates to: TQVRVTNTEARVKQPVDFYADTK*LLAEQV Trigger: AACTTGTTCGGCCAGCAACAACTTTGTATCAGCATA...AAAGTCCACAGGCTGTTTTACTCTGGCTTCAGTGTTTGTAACCCTCACCTGCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
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| CDS-3UTR CAA 90 bp | ACGCAGGTGAGGGTTACAAACACTGAAGCCAGAGTAAAACAGCCTGTGGACTTTGCAGGAGGTAGAGGATaGACCATTTATTCTTCAAAA | + |
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Preference number: 5 (lower is better) Translates to: TQVRVTNTEARVKQPVDFAGGRG*TIYSSK Trigger: TTTTGAAGAATAAATGGTCAATCCTCTACCTCCTGC...AAAGTCCACAGGCTGTTTTACTCTGGCTTCAGTGTTTGTAACCCTCACCTGCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
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| CDS-3UTR CAA 90 bp | TACAGACACGCAAGTCCAGTGGATAACAAGACTTCTTCCAGCAGACACAGTGCTAAGATTTGTTTAAGTTaGCCTTCGCTTCCACTTTGT | + |
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Preference number: 5 (lower is better) Translates to: YRHASPVDNKTSSSRHSAKICLS*PSLPLC Trigger: ACAAAGTGGAAGCGAAGGCAAACTTAAACAAATCTT...AGCACTGTGTCTGCTGGAAGAAGTCTTGTTATCCACTGGACTTGCGTGTCTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
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| CDS-3UTR CAA 90 bp | ACAAACACTGAAGCCAGAGTAAAACAGCCTGTGGACTTTCTTAGACATGTTTCAGCTGATACAAAGTTGTaGCTGGCCGAACAAGTTCTG | + |
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Preference number: 5 (lower is better) Translates to: TNTEARVKQPVDFLRHVSADTKL*LAEQVL Trigger: CAGAACTTGTTCGGCCAGCAACAACTTTGTATCAGC...TGAAACATGTCTAAGAAAGTCCACAGGCTGTTTTACTCTGGCTTCAGTGTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
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| CDS GCA 72 bp | GCTGATGCCGCTGCTGCCCAGGCTGCCAGAGCTCTGTaGCTGTGTGCTGCGGTCCTGGTAGTTGAGCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: ADAAAAQAARAL*LCAAVLVVERE Trigger: CTCCCGCTCAACTACCAGGACCGCAGCACACAGGCACAGAGCTCTGGCAGCCTGGGCAGCAGCGGCATCAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 ENSMUST00000165321.2 |
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| CDS CAA 90 bp | ACGAGGCCCCAACTGCTGTCGCAGGCCGTCACCCACTCCTGGAGCTaGATGAGACTGTCCGGGAAGGAAAGGCTGCACAGGTGTGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: TRPQLLSQAVTHSWS*MRLSGKERLHRCGA Trigger: GGCCCCACACCTGTGCAGCCTTTCCTTCCCGGACAGTCTCATCAAGCTCCAGGAGTGGGTGACGGCCTGCGACAGCAGTTGGGGCCTCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
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| CDS CAA 90 bp | ACGAGGCCCCAACTGCTGTCGCAGGCCGTCACCCACTCCTGGAGCTaGATGAGACCGGGAAGGAAAGGCTGCACAGGTGTGGGGCCACTA | + |
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Preference number: 6 (lower is better) Translates to: TRPQLLSQAVTHSWS*MRPGRKGCTGVGPL Trigger: TAGTGGCCCCACACCTGTGCAGCCTTTCCTTCCCGGTCTCATCAAGCTCCAGGAGTGGGTGACGGCCTGCGACAGCAGTTGGGGCCTCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165321.2 |
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| CDS CAA 72 bp | CAACTGCTGTCGCAGGCCGTCACCCACTCCTGGAGCTaGATGAGACTGTCCGGGAAGGAAAGGCTGCACAGG | + |
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Preference number: 6 (lower is better) Translates to: QLLSQAVTHSWS*MRLSGKERLHR Trigger: CCTGTGCAGCCTTTCCTTCCCGGACAGTCTCATCAAGCTCCAGGAGTGGGTGACGGCCTGCGACAGCAGTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
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| CDS CAA 72 bp | CAACTGCTGTCGCAGGCCGTCACCCACTCCTGGAGCTaGATGAGACCGGGAAGGAAAGGCTGCACAGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: QLLSQAVTHSWS*MRPGRKGCTGV Trigger: CACACCTGTGCAGCCTTTCCTTCCCGGTCTCATCAAGCTCCAGGAGTGGGTGACGGCCTGCGACAGCAGTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165321.2 |
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| CDS TCA 72 bp | CAGAGCTCTGTGCCTGTGTGCTGCGGTCCTGGTAGTTaGGCGGGAGGGTCTGAGGCCTGGCATAGTAGTAAG | + |
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Preference number: 6 (lower is better) Translates to: QSSVPVCCGPGS*AGGSEAWHSSK Trigger: CTTACTACTATGCCAGGCCTCAGACCCTCCCGCTCAACTACCAGGACCGCAGCACACAGGCACAGAGCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 ENSMUST00000165321.2 |
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| CDS CCA 72 bp | TTGCTGCCGATAACTCTCACAGCAAACTGGAACTGCTaGGCCACATCAGCTTCGCTCCGGCCCAGGATCCGG | + |
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Preference number: 6 (lower is better) Translates to: LLPITLTANWNC*ATSASLRPRIR Trigger: CCGGATCCTGGGCCGGAGCGAAGCTGATGTGGCCCAGCAGTTCCAGTTTGCTGTGAGAGTTATCGGCAGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
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| CDS GCA 72 bp | AAGTTGCTGCCGATAACTCTCACAGCAAACTGGAACTaGTGGGCCACATCAGCTTCGCTCCGGCCCAGGATC | + |
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Preference number: 6 (lower is better) Translates to: KLLPITLTANWN*WATSASLRPRI Trigger: GATCCTGGGCCGGAGCGAAGCTGATGTGGCCCAGCAGTTCCAGTTTGCTGTGAGAGTTATCGGCAGCAACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
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| CDS TCA 72 bp | CACCCACTCCTGGAGCTTGATGAGACTGTCTGCGAATaGAGCTTCCTGTGGAGCTCTGAAAACAGTGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: HPLLELDETVCE*SFLWSSENSAA Trigger: CGCCGCACTGTTTTCAGAGCTCCACAGGAAGCTTCATTCGCAGACAGTCTCATCAAGCTCCAGGAGTGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172056.2 |
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| CDS CAA 90 bp | GGGTCTGAGGCCTGGCATAGTAGTAAGGCGTCGAGTGAGCGTCTCTaGGTAACGCTTGTGCAAATAAGGAAGCGTAGCTGGTCACCTTGC | + |
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Preference number: 6 (lower is better) Translates to: GSEAWHSSKASSERL*VTLVQIRKRSWSPC Trigger: GCAAGGTGACCAGCTACGCTTCCTTATTTGCACAAGCGTTACCAAGAGACGCTCACTCGACGCCTTACTACTATGCCAGGCCTCAGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
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| CDS TCA 72 bp | TGGGGTCATATGTCCAAACCAGGAGGCGCCGCAGTGTaGGGCTACTCTCTAGTCCCAAATTCACACCCTGAT | + |
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Preference number: 6 (lower is better) Translates to: WGHMSKPGGAAV*GYSLVPNSHPD Trigger: ATCAGGGTGTGAATTTGGGACTAGAGAGTAGCCTCACACTGCGGCGCCTCCTGGTTTGGACATATGACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000776.15 |
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| CDS CAA 72 bp | GCCTGGCATAGTAGTAAGGCGTCGAGTGAGCGTCTCTaGGTAACGCTTGTGCAAATAAGGAAGCGTAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: AWHSSKASSERL*VTLVQIRKRSW Trigger: CCAGCTACGCTTCCTTATTTGCACAAGCGTTACCAAGAGACGCTCACTCGACGCCTTACTACTATGCCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
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| CDS TCA 72 bp | TCTTTGAGCTCTTGGTGCAATGCGGCACAAAAACTCTaGCCTACAAGTCCAAATGAGCGGTCCAGACTCCTC | + |
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Preference number: 6 (lower is better) Translates to: SLSSWCNAAQKL*PTSPNERSRLL Trigger: GAGGAGTCTGGACCGCTCATTTGGACTTGTAGGTCAGAGTTTTTGTGCCGCATTGCACCAAGAGCTCAAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
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| CDS TCA 72 bp | ATGAGCGGTCCAGACTCCTCTGGTCAGCATACTTTCTaGTTTTATTATGCAACCATCCCAACTCAGCAAGCC | + |
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Preference number: 6 (lower is better) Translates to: MSGPDSSGQHTF*FYYATIPTQQA Trigger: GGCTTGCTGAGTTGGGATGGTTGCATAATAAAATCAGAAAGTATGCTGACCAGAGGAGTCTGGACCGCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
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| CDS CAA 72 bp | CAGAACAGAGAGGAGCCTGTAGTATTCTTTGAGCTCTaGGTGCAATGCGGCACAAAAACTCTGACCTACAAG | + |
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Preference number: 6 (lower is better) Translates to: QNREEPVVFFEL*VQCGTKTLTYK Trigger: CTTGTAGGTCAGAGTTTTTGTGCCGCATTGCACCAAGAGCTCAAAGAATACTACAGGCTCCTCTCTGTTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000776.15 ENSMUST00000164774.8 |
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