Pregenerated sensors for TUBGCP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025474Ensembl transcript IDs: ENSMUST00000026547.9, ENSMUST00000209574.2, ENSMUST00000210224.2, ENSMUST00000211261.2, ENSMUST00000211638.2
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCTCAGTGTCGACCCGCCCACACACTCGCCTTTATCCACTGAGGTaGCAAGGGAGGCAAGGATGTCGATGGTGCGCATGGCTGGCTGGA | + |
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Preference number: 1 (lower is better) Translates to: GSVSTRPHTRLYPLR*QGRQGCRWCAWLAG Trigger: TCCAGCCAGCCATGCGCACCATCGACATCCTTGCCTCCCTTGCCACCTCAGTGGATAAAGGCGAGTGTGTGGGCGGGTCGACACTGAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR TCA 90 bp | GATGGTGCGCATGGCTGGCTGGATGTAGAACCAGAGCTTCTGCAGTaGGAGGAGGCCCTGCCTGTGCAGCTGTTCCAGCTGTGTGACCAG | + |
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Preference number: 1 (lower is better) Translates to: DGAHGWLDVEPELLQ*EEALPVQLFQLCDQ Trigger: CTGGTCACACAGCTGGAACAGCTGCACAGGCAGGGCCTCCTCTCACTGCAGAAGCTCTGGTTCTACATCCAGCCAGCCATGCGCACCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR TCA 90 bp | AAGAAGGCTCAGTGTCGACCCGCCCACACACTCGCCTTTATCCACTaGGGTGGCAAGGGAGGCAAGGATGTCGATGGTGCGCATGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: KKAQCRPAHTLAFIH*GGKGGKDVDGAHGW Trigger: CCAGCCATGCGCACCATCGACATCCTTGCCTCCCTTGCCACCTCAGTGGATAAAGGCGAGTGTGTGGGCGGGTCGACACTGAGCCTTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR CCA 90 bp | GAGAAGGCCTCCAGACCACTCAGTGTGAGCTCCGTGGGGTCAGCATaGGTCATTGCCTTTTCCTGCTTGGTCTCGATGGCCAGAACCCGC | + |
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Preference number: 1 (lower is better) Translates to: EKASRPLSVSSVGSA*VIAFSCLVSMARTR Trigger: GCGGGTTCTGGCCATCGAGACCAAGCAGGAAAAGGCAATGACCCATGCTGACCCCACGGAGCTCACACTGAGTGGTCTGGAGGCCTTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR TCA 90 bp | TCAGATAGAGGCACAGCTCCTGCGCCTGGCTGTCCCCGGTGTAGTTaGAGCTCCTATCATGAAGAAGGCTCAGTGTCGACCCGCCCACAC | + |
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Preference number: 1 (lower is better) Translates to: SDRGTAPAPGCPRCS*SSYHEEGSVSTRPH Trigger: GTGTGGGCGGGTCGACACTGAGCCTTCTTCATGATAGGAGCTTCAACTACACCGGGGACAGCCAGGCGCAGGAGCTGTGCCTCTATCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR TCA 90 bp | ACCACTTGGCGGAGTGCAGTGCATGCTGCTTGGCCGTCTTGTTGCTaGTCCAGACACTGCAGAGCTGCCGCTCCACGTGCTTGCAGTAGA | + |
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Preference number: 1 (lower is better) Translates to: TTWRSAVHAAWPSCC*SRHCRAAAPRACSR Trigger: TCTACTGCAAGCACGTGGAGCGGCAGCTCTGCAGTGTCTGGATCAGCAACAAGACGGCCAAGCAGCATGCACTGCACTCCGCCAAGTGGT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR GCA 90 bp | AGAGTGAAAGCACCAGCAAACCACTTGGCGGAGTGCAGTGCATGCTaGTTGGCCGTCTTGTTGCTGATCCAGACACTGCAGAGCTGCCGC | + |
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Preference number: 1 (lower is better) Translates to: RVKAPANHLAECSAC*LAVLLLIQTLQSCR Trigger: GCGGCAGCTCTGCAGTGTCTGGATCAGCAACAAGACGGCCAAGCAGCATGCACTGCACTCCGCCAAGTGGTTTGCTGGTGCTTTCACTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR GCA 90 bp | CGCAGAGTGAAAGCACCAGCAAACCACTTGGCGGAGTGCAGTGCATaGTGCTTGGCCGTCTTGTTGCTGATCCAGACACTGCAGAGCTGC | + |
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Preference number: 1 (lower is better) Translates to: RRVKAPANHLAECSA*CLAVLLLIQTLQSC Trigger: GCAGCTCTGCAGTGTCTGGATCAGCAACAAGACGGCCAAGCAGCATGCACTGCACTCCGCCAAGTGGTTTGCTGGTGCTTTCACTCTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR CCA 90 bp | TATCCACTGAGGTGGCAAGGGAGGCAAGGATGTCGATGGTGCGCATaGCTGGCTGGATGTAGAACCAGAGCTTCTGCAGTGAGAGGAGGC | + |
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Preference number: 1 (lower is better) Translates to: YPLRWQGRQGCRWCA*LAGCRTRASAVRGG Trigger: GCCTCCTCTCACTGCAGAAGCTCTGGTTCTACATCCAGCCAGCCATGCGCACCATCGACATCCTTGCCTCCCTTGCCACCTCAGTGGATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR GCA 90 bp | CGCCTTTATCCACTGAGGTGGCAAGGGAGGCAAGGATGTCGATGGTaGGCATGGCTGGCTGGATGTAGAACCAGAGCTTCTGCAGTGAGA | + |
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Preference number: 1 (lower is better) Translates to: RLYPLRWQGRQGCRW*AWLAGCRTRASAVR Trigger: TCTCACTGCAGAAGCTCTGGTTCTACATCCAGCCAGCCATGCGCACCATCGACATCCTTGCCTCCCTTGCCACCTCAGTGGATAAAGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR CCA 90 bp | ACTCGCCTTTATCCACTGAGGTGGCAAGGGAGGCAAGGATGTCGATaGTGCGCATGGCTGGCTGGATGTAGAACCAGAGCTTCTGCAGTG | + |
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Preference number: 1 (lower is better) Translates to: TRLYPLRWQGRQGCR*CAWLAGCRTRASAV Trigger: CACTGCAGAAGCTCTGGTTCTACATCCAGCCAGCCATGCGCACCATCGACATCCTTGCCTCCCTTGCCACCTCAGTGGATAAAGGCGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR TCA 90 bp | TCCTCAATCCGTTCAGTCTCTGTGGGTGGCCCCTGCACACTACCCTaGTCCAGTGTCAGACGGCCTAGCTCACTGTCCAGTTTCATACTC | + |
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Preference number: 1 (lower is better) Translates to: SSIRSVSVGGPCTLP*SSVRRPSSLSSFIL Trigger: GAGTATGAAACTGGACAGTGAGCTAGGCCGTCTGACACTGGATCAGGGTAGTGTGCAGGGGCCACCCACAGAGACTGAACGGATTGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR CCA 90 bp | TTTTCCTGTGCTGAGGATCTTGCCTGCTACCTTCTGCAGGAAGGATaGGATCTGCTGCGGCAGCACAGTGTAGCGCTGGTCCCAGTACTT | + |
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Preference number: 1 (lower is better) Translates to: FSCAEDLACYLLQEG*DLLRQHSVALVPVL Trigger: AAGTACTGGGACCAGCGCTACACTGTGCTGCCGCAGCAGATCCCATCCTTCCTGCAGAAGGTAGCAGGCAAGATCCTCAGCACAGGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR TCA 90 bp | TCTGCAGTGAGAGGAGGCCCTGCCTGTGCAGCTGTTCCAGCTGTGTaGCCAGAATCAGGTATTCCTTTACTAGGGTTCTCATGGCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: SAVRGGPACAAVPAV*PESGIPLLGFSWQQ Trigger: CTGCTGCCATGAGAACCCTAGTAAAGGAATACCTGATTCTGGTCACACAGCTGGAACAGCTGCACAGGCAGGGCCTCCTCTCACTGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR GCA 90 bp | AATGATGCCCCTATAGATCCACTTCTCCAGGATCTCGAAGTAAGGTaGACTGGCTGCCTTGGTCAGATAGAGGCACAGCTCCTGCGCCTG | + |
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Preference number: 1 (lower is better) Translates to: NDAPIDPLLQDLEVR*TGCLGQIEAQLLRL Trigger: CAGGCGCAGGAGCTGTGCCTCTATCTGACCAAGGCAGCCAGTGCACCTTACTTCGAGATCCTGGAGAAGTGGATCTATAGGGGCATCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR TCA 90 bp | TTTTTGTCAAAGTTGTTGATGGTGGCCTCGAAACCAGAGGCCAGCTaGGGAGCATCCACATGCTCAGACAGATGCTTCCTGGTAAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: FLSKLLMVASKPEAS*GASTCSDRCFLVSS Trigger: GGAGCTTACCAGGAAGCATCTGTCTGAGCATGTGGATGCTCCTCAGCTGGCCTCTGGTTTCGAGGCCACCATCAACAACTTTGACAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR GCA 90 bp | CTTAGAGGCTGCAACAGGGATGCTGAAGCTGGTGGTGTTGCTAGTTaGAGCACTAGCTGCAAGCTCAGCTCTTTCCTTTGCATTCTGTTG | + |
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Preference number: 1 (lower is better) Translates to: LRGCNRDAEAGGVAS*STSCKLSSFLCILL Trigger: CAACAGAATGCAAAGGAAAGAGCTGAGCTTGCAGCTAGTGCTGCAACTAGCAACACCACCAGCTTCAGCATCCCTGTTGCAGCCTCTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211261.2 |
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| 3UTR CCA 90 bp | GTCAGCATGCAGTCCTTCAGGCAGTTGTCAAGGAAGCTTGTGTGGTaGCCAAGGACATCGTCAATGTTGGAGGCAGATTTCAGGTTTTTC | + |
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Preference number: 1 (lower is better) Translates to: VSMQSFRQLSRKLVW*PRTSSMLEADFRFF Trigger: GAAAAACCTGAAATCTGCCTCCAACATTGACGATGTCCTTGGCCACCACACAAGCTTCCTTGACAACTGCCTGAAGGACTGCATGCTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR CCA 90 bp | TTGGTCAGCATGCAGTCCTTCAGGCAGTTGTCAAGGAAGCTTGTGTaGTGGCCAAGGACATCGTCAATGTTGGAGGCAGATTTCAGGTTT | + |
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Preference number: 1 (lower is better) Translates to: LVSMQSFRQLSRKLV*WPRTSSMLEADFRF Trigger: AAACCTGAAATCTGCCTCCAACATTGACGATGTCCTTGGCCACCACACAAGCTTCCTTGACAACTGCCTGAAGGACTGCATGCTGACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR GCA 90 bp | TCCTTTACTAGGGTTCTCATGGCAGCAGCCAGGGCATGGTTCACCTaGCCATATTCAAATGAAGACTTCTCCTCAATGAACCTGGTCACA | + |
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Preference number: 1 (lower is better) Translates to: SFTRVLMAAARAWFT*PYSNEDFSSMNLVT Trigger: TGTGACCAGGTTCATTGAGGAGAAGTCTTCATTTGAATATGGGCAGGTGAACCATGCCCTGGCTGCTGCCATGAGAACCCTAGTAAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR TCA 90 bp | ATAATGCACAACAGCCATGTTCCAGAAATAATGATATTTAACAAGTaGGCTCATTGCGCAGGAATGGCCACCCTGGGTGCTGGTGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: IMHNSHVPEIMIFNK*AHCAGMATLGAGAE Trigger: CTCAGCACCAGCACCCAGGGTGGCCATTCCTGCGCAATGAGCTCACTTGTTAAATATCATTATTTCTGGAACATGGCTGTTGTGCATTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR CCA 90 bp | ATCAGGTATTCCTTTACTAGGGTTCTCATGGCAGCAGCCAGGGCATaGTTCACCTGCCCATATTCAAATGAAGACTTCTCCTCAATGAAC | + |
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Preference number: 1 (lower is better) Translates to: IRYSFTRVLMAAARA*FTCPYSNEDFSSMN Trigger: GTTCATTGAGGAGAAGTCTTCATTTGAATATGGGCAGGTGAACCATGCCCTGGCTGCTGCCATGAGAACCCTAGTAAAGGAATACCTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR GCA 90 bp | CACTTTGCTGGCATAATTGAACGCTTTCTCTATCTGCTCCACATATaGCCGCTCTTTAAGGGTATAGATGATTTCTTTGGCTACGGGACA | + |
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Preference number: 1 (lower is better) Translates to: HFAGIIERFLYLLHI*PLFKGIDDFFGYGT Trigger: TGTCCCGTAGCCAAAGAAATCATCTATACCCTTAAAGAGCGGGCATATGTGGAGCAGATAGAGAAAGCGTTCAATTATGCCAGCAAAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR-3UTR GCA 90 bp | GGGTCAGTGTTGGCAGTGCTCATTCGCAGGGCCAGCTCCAACAGGGCCTCCAGGAGTGAGAGGAGGCCCTaGCTGTGCAGCTGTTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: GSVLAVLIRRASSNRASRSERRP*LCSCSS Trigger: GCTGGAACAGCTGCACAGGCAGGGCCTCCTCTCACT...CCTGGAGGCCCTGTTGGAGCTGGCCCTGCGAATGAGCACTGCCAACACTGACCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR CAA 90 bp | GTGAAAGCACCAGCAAACCACTTGGCGGAGTGCAGTGCATGCTGCTaGGCCGTCTTGTTGCTGATCCAGACACTGCAGAGCTGCCGCTCC | + |
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Preference number: 2 (lower is better) Translates to: VKAPANHLAECSACC*AVLLLIQTLQSCRS Trigger: GGAGCGGCAGCTCTGCAGTGTCTGGATCAGCAACAAGACGGCCAAGCAGCATGCACTGCACTCCGCCAAGTGGTTTGCTGGTGCTTTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAGTGCTCATTCGCAGGGCCAGCTCCAACAGGGCCTCCAGGCGTGTGAGTATGCTGAGGATCTTGCCTaGTACCTTCTGCAGGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: GSAHSQGQLQQGLQACEYAEDLA*YLLQEG Trigger: TCCTTCCTGCAGAAGGTAGCAGGCAAGATCCTCAGC...ATACTCACACGCCTGGAGGCCCTGTTGGAGCTGGCCCTGCGAATGAGCACTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGGTCCCAGTACTTGTCGTTGTAGTCCTCCTGGATCTTCTCCTTCCGCAGCTCTCGCCTTTATCCACTaGGGTGGCAAGGGAGGCAAG | + |
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Preference number: 2 (lower is better) Translates to: AGPSTCRCSPPGSSPSAALAFIH*GGKGGK Trigger: CTTGCCTCCCTTGCCACCTCAGTGGATAAAGGCGAG...AGCTGCGGAAGGAGAAGATCCAGGAGGACTACAACGACAAGTACTGGGACCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGTCAGCATGCAGTCCTTCAGGCAGTTGTCAAGGAAGCTTGTGTGGTGGCCAAGGAGGCCCTGCCTGTaGAGCTGTTCCAGCTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: LVSMQSFRQLSRKLVWWPRRPCL*SCSSCV Trigger: CACACAGCTGGAACAGCTGCACAGGCAGGGCCTCCT...TGGCCACCACACAAGCTTCCTTGACAACTGCCTGAAGGACTGCATGCTGACCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR-3UTR CCA 90 bp | GTCAAAGGAGAAGGCCTCCAGACCACTCAGTGTGAGCTCCGTGGGGTCAGCATGTTACTAGGGTTCTCATaGCAGCAGCCAGGGCATGGT | + |
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Preference number: 2 (lower is better) Translates to: VKGEGLQTTQCELRGVSMLLGFS*QQPGHG Trigger: ACCATGCCCTGGCTGCTGCCATGAGAACCCTAGTAA...CATGCTGACCCCACGGAGCTCACACTGAGTGGTCTGGAGGCCTTCTCCTTTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTCCTCCACTGGCTTCCTGAGCTCCTCCTCAGTCAGGTCCATGAAATGCACGAGGCAAGGATGTCGATaGTGCGCATGGCTGGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: MSSTGFLSSSSVRSMKCTRQGCR*CAWLAG Trigger: TCCAGCCAGCCATGCGCACCATCGACATCCTTGCCT...CGTGCATTTCATGGACCTGACTGAGGAGGAGCTCAGGAAGCCAGTGGAGGACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGAAGGCCTCCAGACCACTCAGTGTGAGCTCCGTGGGGTCAGCATGGGTCCTTTATCCACTGAGGTaGCAAGGGAGGCAAGGATGT | + |
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Preference number: 2 (lower is better) Translates to: KEKASRPLSVSSVGSAWVLYPLR*QGRQGC Trigger: ACATCCTTGCCTCCCTTGCCACCTCAGTGGATAAAG...GACCCATGCTGACCCCACGGAGCTCACACTGAGTGGTCTGGAGGCCTTCTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR-3UTR TCA 90 bp | GGGTCAGTGTTGGCAGTGCTCATTCGCAGGGCCAGCTCCAACAGGGCCTCCAGGCATGACCACACTCTCTaGCCACATTTAGGTATTTTC | + |
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Preference number: 2 (lower is better) Translates to: GSVLAVLIRRASSNRASRHDHTL*PHLGIF Trigger: GAAAATACCTAAATGTGGTCAGAGAGTGTGGTCATG...CCTGGAGGCCCTGTTGGAGCTGGCCCTGCGAATGAGCACTGCCAACACTGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGTCAGCATGCAGTCCTTCAGGCAGTTGTCAAGGAAGCTTGTGTGGTGGCCAGCAGCAGCCAGGGCATaGTTCACCTGCCCATATTCA | + |
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Preference number: 2 (lower is better) Translates to: LVSMQSFRQLSRKLVWWPAAARA*FTCPYS Trigger: TGAATATGGGCAGGTGAACCATGCCCTGGCTGCTGC...TGGCCACCACACAAGCTTCCTTGACAACTGCCTGAAGGACTGCATGCTGACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGTCAGGTCCATGAAATGCACGAAGAAGTCCCCCTGGTCCATCAGGAAGTACTTCTGCAGGAAGGATaGGATCTGCTGCGGCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: LSQVHEMHEEVPLVHQEVLLQEG*DLLRQH Trigger: GTGCTGCCGCAGCAGATCCCATCCTTCCTGCAGAAG...TACTTCCTGATGGACCAGGGGGACTTCTTCGTGCATTTCATGGACCTGACTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCAGTTGTCAAGGAAGCTTGTGTGGTGGCCAAGGACATCGTCAATGTTGGAGCCTGCTTGGTCTCGATaGCCAGAACCCGCAAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: RQLSRKLVWWPRTSSMLEPAWSR*PEPAKA Trigger: AGCTTTTGCGGGTTCTGGCCATCGAGACCAAGCAGG...CTCCAACATTGACGATGTCCTTGGCCACCACACAAGCTTCCTTGACAACTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR CAA 90 bp | GTGGACATCTTAGAGGCTGCAACAGGGATGCTGAAGCTGGTGGTGTaGCTAGTTGCAGCACTAGCTGCAAGCTCAGCTCTTTCCTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: VDILEAATGMLKLVV*LVAALAASSALSFA Trigger: TGCAAAGGAAAGAGCTGAGCTTGCAGCTAGTGCTGCAACTAGCAACACCACCAGCTTCAGCATCCCTGTTGCAGCCTCTAAGATGTCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211261.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCAGTTGTCAAGGAAGCTTGTGTGGTGGCCAAGGACATCGTCAATGTTGGAGCCTCAGTCAGGTCCATaGAATGCACGAAGAAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: RQLSRKLVWWPRTSSMLEPQSGP*NARRSP Trigger: GGGACTTCTTCGTGCATTTCATGGACCTGACTGAGG...CTCCAACATTGACGATGTCCTTGGCCACCACACAAGCTTCCTTGACAACTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAGTCAGGTCCATGAAATGCACGAAGAAGTCCCCCTGGTCCATCAGGAAGTATTGCCTGCTACCTTCTaGAGGAAGGATGGGATCTGC | + |
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Preference number: 2 (lower is better) Translates to: LSQVHEMHEEVPLVHQEVLPATF*RKDGIC Trigger: GCAGATCCCATCCTTCCTGCAGAAGGTAGCAGGCAA...TACTTCCTGATGGACCAGGGGGACTTCTTCGTGCATTTCATGGACCTGACTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCTCCATGAGGAAGTCCAGCAGCACTTTGCTGGCATAATTGAACGCTTTCTCGGACAGGTGACATCATaGCCACACTCTCTGACCACA | + |
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Preference number: 2 (lower is better) Translates to: LLHEEVQQHFAGIIERFLGQVTS*PHSLTT Trigger: TGTGGTCAGAGAGTGTGGTCATGATGTCACCTGTCC...GAGAAAGCGTTCAATTATGCCAGCAAAGTGCTGCTGGACTTCCTCATGGAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGTTGGTAAACATGACGCATACGGACATGAGCTTGGAGAAAACCTTCAGCAGTTCGCTGCCGCAGAGTaGAAGCACCAGCAAACCACT | + |
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Preference number: 2 (lower is better) Translates to: TVGKHDAYGHELGENLQQFAAAE*KHQQTT Trigger: AGTGGTTTGCTGGTGCTTTCACTCTGCGGCAGCGAA...CTGCTGAAGGTTTTCTCCAAGCTCATGTCCGTATGCGTCATGTTTACCAACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGTTGGTAAACATGACGCATACGGACATGAGCTTGGAGAAAACCTTCAGCAGTGTCGATGGTGCGCATaGCTGGCTGGATGTAGAACC | + |
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Preference number: 2 (lower is better) Translates to: TVGKHDAYGHELGENLQQCRWCA*LAGCRT Trigger: GGTTCTACATCCAGCCAGCCATGCGCACCATCGACA...CTGCTGAAGGTTTTCTCCAAGCTCATGTCCGTATGCGTCATGTTTACCAACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGTTGGTAAACATGACGCATACGGACATGAGCTTGGAGAAAACCTTCAGCAGGTGCACTGGCTGCCTTaGTCAGATAGAGGCACAGCT | + |
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Preference number: 2 (lower is better) Translates to: TVGKHDAYGHELGENLQQVHWLP*SDRGTA Trigger: AGCTGTGCCTCTATCTGACCAAGGCAGCCAGTGCAC...CTGCTGAAGGTTTTCTCCAAGCTCATGTCCGTATGCGTCATGTTTACCAACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTGCATACAGTTGGTAAACATGACGCATACGGACATGAGCTTGGAGAAAACCGATGGTGCGCATGGCTaGCTGGATGTAGAACCAGAG | + |
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Preference number: 2 (lower is better) Translates to: FCIQLVNMTHTDMSLEKTDGAHG*LDVEPE Trigger: CTCTGGTTCTACATCCAGCCAGCCATGCGCACCATC...GGTTTTCTCCAAGCTCATGTCCGTATGCGTCATGTTTACCAACTGTATGCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCATCTTTCTTGTAAGTTCCAGAGACTGCTGCAGTGTGGAGCCTGTGGATACAGTTGCAGCACTAGCTaGAAGCTCAGCTCTTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: KHLSCKFQRLLQCGACGYSCSTS*KLSSFL Trigger: AAGGAAAGAGCTGAGCTTGCAGCTAGTGCTGCAACT...GTATCCACAGGCTCCACACTGCAGCAGTCTCTGGAACTTACAAGAAAGATGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211261.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGTTGGTAAACATGACGCATACGGACATGAGCTTGGAGAAAACCTTCAGCAGTGTCCCCGGTGTAGTTaGAGCTCCTATCATGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: TVGKHDAYGHELGENLQQCPRCS*SSYHEE Trigger: TTCTTCATGATAGGAGCTTCAACTACACCGGGGACA...CTGCTGAAGGTTTTCTCCAAGCTCATGTCCGTATGCGTCATGTTTACCAACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| 3UTR-3UTR TCA 90 bp | TTGTCAAGGAAGCTTGTGTGGTGGCCAAGGACATCGTCAATGTTGGAGGCAGATCTGCCCATATTCAAATaGAGACTTCTCCTCAATGAA | + |
|
Preference number: 2 (lower is better) Translates to: LSRKLVWWPRTSSMLEADLPIFK*RLLLNE Trigger: TTCATTGAGGAGAAGTCTTCATTTGAATATGGGCAG...ATCTGCCTCCAACATTGACGATGTCCTTGGCCACCACACAAGCTTCCTTGACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| 3UTR TCA 72 bp | CAGTGTCGACCCGCCCACACACTCGCCTTTATCCACTaGGGTGGCAAGGGAGGCAAGGATGTCGATGGTGCG | + |
|
Preference number: 3 (lower is better) Translates to: QCRPAHTLAFIH*GGKGGKDVDGA Trigger: CGCACCATCGACATCCTTGCCTCCCTTGCCACCTCAGTGGATAAAGGCGAGTGTGTGGGCGGGTCGACACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| 3UTR TCA 72 bp | CGGAGTGCAGTGCATGCTGCTTGGCCGTCTTGTTGCTaGTCCAGACACTGCAGAGCTGCCGCTCCACGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: RSAVHAAWPSCC*SRHCRAAAPRA Trigger: AGCACGTGGAGCGGCAGCTCTGCAGTGTCTGGATCAGCAACAAGACGGCCAAGCAGCATGCACTGCACTCCG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| 3UTR CCA 72 bp | TCGACCCGCCCACACACTCGCCTTTATCCACTGAGGTaGCAAGGGAGGCAAGGATGTCGATGGTGCGCATGG | + |
|
Preference number: 3 (lower is better) Translates to: STRPHTRLYPLR*QGRQGCRWCAW Trigger: CCATGCGCACCATCGACATCCTTGCCTCCCTTGCCACCTCAGTGGATAAAGGCGAGTGTGTGGGCGGGTCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| 3UTR CCA 72 bp | CCTTCCGGGGGCGATCCTCAATCCGTTCAGTCTCTGTaGGTGGCCCCTGCACACTACCCTGATCCAGTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: PSGGDPQSVQSL*VAPAHYPDPVS Trigger: TGACACTGGATCAGGGTAGTGTGCAGGGGCCACCCACAGAGACTGAACGGATTGAGGATCGCCCCCGGAAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| 3UTR CCA 72 bp | TTAACAAGTGAGCTCATTGCGCAGGAATGGCCACCCTaGGTGCTGGTGCTGAGGGTCCCCGTGGGACAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LTSELIAQEWPP*VLVLRVPVGQA Trigger: TGCCTGTCCCACGGGGACCCTCAGCACCAGCACCCAGGGTGGCCATTCCTGCGCAATGAGCTCACTTGTTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| 3UTR TCA 72 bp | CATGGCTGGCTGGATGTAGAACCAGAGCTTCTGCAGTaGGAGGAGGCCCTGCCTGTGCAGCTGTTCCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: HGWLDVEPELLQ*EEALPVQLFQL Trigger: CAGCTGGAACAGCTGCACAGGCAGGGCCTCCTCTCACTGCAGAAGCTCTGGTTCTACATCCAGCCAGCCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| 3UTR TCA 72 bp | CGTTCAGTCTCTGTGGGTGGCCCCTGCACACTACCCTaGTCCAGTGTCAGACGGCCTAGCTCACTGTCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: RSVSVGGPCTLP*SSVRRPSSLSS Trigger: ACTGGACAGTGAGCTAGGCCGTCTGACACTGGATCAGGGTAGTGTGCAGGGGCCACCCACAGAGACTGAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| 3UTR CCA 72 bp | GCTGAGGATCTTGCCTGCTACCTTCTGCAGGAAGGATaGGATCTGCTGCGGCAGCACAGTGTAGCGCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: AEDLACYLLQEG*DLLRQHSVALV Trigger: GACCAGCGCTACACTGTGCTGCCGCAGCAGATCCCATCCTTCCTGCAGAAGGTAGCAGGCAAGATCCTCAGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| 3UTR GCA 72 bp | ACTCAGTGTGAGCTCCGTGGGGTCAGCATGGGTCATTaGCTTTTCCTGCTTGGTCTCGATGGCCAGAACCCG | + |
|
Preference number: 3 (lower is better) Translates to: TQCELRGVSMGH*LFLLGLDGQNP Trigger: CGGGTTCTGGCCATCGAGACCAAGCAGGAAAAGGCAATGACCCATGCTGACCCCACGGAGCTCACACTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| 3UTR CCA 72 bp | AGGTGGCAAGGGAGGCAAGGATGTCGATGGTGCGCATaGCTGGCTGGATGTAGAACCAGAGCTTCTGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: RWQGRQGCRWCA*LAGCRTRASAV Trigger: CACTGCAGAAGCTCTGGTTCTACATCCAGCCAGCCATGCGCACCATCGACATCCTTGCCTCCCTTGCCACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| 3UTR CCA 72 bp | TCCAGACCACTCAGTGTGAGCTCCGTGGGGTCAGCATaGGTCATTGCCTTTTCCTGCTTGGTCTCGATGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SRPLSVSSVGSA*VIAFSCLVSMA Trigger: GGCCATCGAGACCAAGCAGGAAAAGGCAATGACCCATGCTGACCCCACGGAGCTCACACTGAGTGGTCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| 3UTR GCA 72 bp | CGCAGAGTGAAAGCACCAGCAAACCACTTGGCGGAGTaGAGTGCATGCTGCTTGGCCGTCTTGTTGCTGATC | + |
|
Preference number: 3 (lower is better) Translates to: RRVKAPANHLAE*SACCLAVLLLI Trigger: GATCAGCAACAAGACGGCCAAGCAGCATGCACTGCACTCCGCCAAGTGGTTTGCTGGTGCTTTCACTCTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| 3UTR CCA 72 bp | TATCCACTGAGGTGGCAAGGGAGGCAAGGATGTCGATaGTGCGCATGGCTGGCTGGATGTAGAACCAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: YPLRWQGRQGCR*CAWLAGCRTRA Trigger: AGCTCTGGTTCTACATCCAGCCAGCCATGCGCACCATCGACATCCTTGCCTCCCTTGCCACCTCAGTGGATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| 3UTR GCA 72 bp | AAAGCACCAGCAAACCACTTGGCGGAGTGCAGTGCATaGTGCTTGGCCGTCTTGTTGCTGATCCAGACACTG | + |
|
Preference number: 3 (lower is better) Translates to: KAPANHLAECSA*CLAVLLLIQTL Trigger: CAGTGTCTGGATCAGCAACAAGACGGCCAAGCAGCATGCACTGCACTCCGCCAAGTGGTTTGCTGGTGCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTCAGCATGCAGTCCTTCAGGCAGTTGTCAAGGAAGCTTGTGTGGTGGCCATGCTTGGCCGTCTTGTaGCTGATCCAGACACTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LVSMQSFRQLSRKLVWWPCLAVL*LIQTLQ Trigger: CTGCAGTGTCTGGATCAGCAACAAGACGGCCAAGCA...TGGCCACCACACAAGCTTCCTTGACAACTGCCTGAAGGACTGCATGCTGACCAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| 3UTR TCA 72 bp | TGTAGTCAAAGGAGAAGGCCTCCAGACCACTCAGTGTaGGCTCCGTGGGGTCAGCATGGGTCATTGCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: CSQRRRPPDHSV*APWGQHGSLPF Trigger: AAAAGGCAATGACCCATGCTGACCCCACGGAGCTCACACTGAGTGGTCTGGAGGCCTTCTCCTTTGACTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| 3UTR TCA 72 bp | AAGTTGTTGATGGTGGCCTCGAAACCAGAGGCCAGCTaGGGAGCATCCACATGCTCAGACAGATGCTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: KLLMVASKPEAS*GASTCSDRCFL Trigger: CAGGAAGCATCTGTCTGAGCATGTGGATGCTCCTCAGCTGGCCTCTGGTTTCGAGGCCACCATCAACAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| 3UTR GCA 72 bp | TGCAACAGGGATGCTGAAGCTGGTGGTGTTGCTAGTTaGAGCACTAGCTGCAAGCTCAGCTCTTTCCTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: CNRDAEAGGVAS*STSCKLSSFLC Trigger: GCAAAGGAAAGAGCTGAGCTTGCAGCTAGTGCTGCAACTAGCAACACCACCAGCTTCAGCATCCCTGTTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211261.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGACTGCTGCAGTGTGGAGCCTGTGGATACACTGCCAAGCTGCTTCCTCAGGCTCAGCTCTTTCCTTaGCATTCTGTTGCAAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: QRLLQCGACGYTAKLLPQAQLFP*HSVAKT Trigger: AGTTTTTGCAACAGAATGCAAAGGAAAGAGCTGAGC...CTGAGGAAGCAGCTTGGCAGTGTATCCACAGGCTCCACACTGCAGCAGTCTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211261.2 |
||
| 3UTR CCA 72 bp | CAGTCCTTCAGGCAGTTGTCAAGGAAGCTTGTGTGGTaGCCAAGGACATCGTCAATGTTGGAGGCAGATTTC | + |
|
Preference number: 3 (lower is better) Translates to: QSFRQLSRKLVW*PRTSSMLEADF Trigger: GAAATCTGCCTCCAACATTGACGATGTCCTTGGCCACCACACAAGCTTCCTTGACAACTGCCTGAAGGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| 3UTR CCA 72 bp | ATGCAGTCCTTCAGGCAGTTGTCAAGGAAGCTTGTGTaGTGGCCAAGGACATCGTCAATGTTGGAGGCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: MQSFRQLSRKLV*WPRTSSMLEAD Trigger: ATCTGCCTCCAACATTGACGATGTCCTTGGCCACCACACAAGCTTCCTTGACAACTGCCTGAAGGACTGCAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGCATACAGTTGGTAAACATGACGCATACGGACATGAGCTTGGAGAAAACCCCTGTGCTGAGGATCTaGCCTGCTACCTTCTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: FCIQLVNMTHTDMSLEKTPVLRI*PATFCR Trigger: CCTGCAGAAGGTAGCAGGCAAGATCCTCAGCACAGG...GGTTTTCTCCAAGCTCATGTCCGTATGCGTCATGTTTACCAACTGTATGCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| 3UTR TCA 72 bp | CAAGAAGATGGGCAGAGAAGTTTTTGTCAAAGTTGTTaGTGGTGGCCTCGAAACCAGAGGCCAGCTGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: QEDGQRSFCQSC*WWPRNQRPAEE Trigger: CTCCTCAGCTGGCCTCTGGTTTCGAGGCCACCATCAACAACTTTGACAAAAACTTCTCTGCCCATCTTCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| 3UTR GCA 72 bp | AGGGTTCTCATGGCAGCAGCCAGGGCATGGTTCACCTaGCCATATTCAAATGAAGACTTCTCCTCAATGAAC | + |
|
Preference number: 3 (lower is better) Translates to: RVLMAAARAWFT*PYSNEDFSSMN Trigger: GTTCATTGAGGAGAAGTCTTCATTTGAATATGGGCAGGTGAACCATGCCCTGGCTGCTGCCATGAGAACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGCATACAGTTGGTAAACATGACGCATACGGACATGAGCTTGGAGAAAACCGGTCAGCATGGGTCATaGCCTTTTCCTGCTTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: FCIQLVNMTHTDMSLEKTGQHGS*PFPAWS Trigger: AGACCAAGCAGGAAAAGGCAATGACCCATGCTGACC...GGTTTTCTCCAAGCTCATGTCCGTATGCGTCATGTTTACCAACTGTATGCAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGTGGAGCCTGTGGATACACTGCCAAGCTGCTTCCTCAGTTCCTCTAGCTCTTTTCCTTTGCATTCTGTaGCAAAAACTGAAGTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: VWSLWIHCQAASSVPLALFLCIL*QKLKCL Trigger: GAGACACTTCAGTTTTTGCAACAGAATGCAAAGGAA...AAGAGCTAGAGGAACTGAGGAAGCAGCTTGGCAGTGTATCCACAGGCTCCACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211261.2 |
||
| 3UTR GCA 72 bp | GGCATAATTGAACGCTTTCTCTATCTGCTCCACATATaGCCGCTCTTTAAGGGTATAGATGATTTCTTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: GIIERFLYLLHI*PLFKGIDDFFG Trigger: GCCAAAGAAATCATCTATACCCTTAAAGAGCGGGCATATGTGGAGCAGATAGAGAAAGCGTTCAATTATGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGTGCTCATTCGCAGGGCCAGCTCCAACAGGGCCTCCAGGCGTGTGAGTATTGGACAGGTCCAGGTTaGGGTCGACAAGGAAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GSAHSQGQLQQGLQACEYWTGPG*GRQGRY Trigger: GTACCTTCCTTGTCGACCCCAACCTGGACCTGTCCA...ATACTCACACGCCTGGAGGCCCTGTTGGAGCTGGCCCTGCGAATGAGCACTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| CDS-3UTR CCA 90 bp | GTCAAAGGAGAAGGCCTCCAGACCACTCAGTGTGAGCTCCGTGGGGTCAGCATGGCAGTGTGGAGCCTGTaGATACACTGCCAAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VKGEGLQTTQCELRGVSMAVWSL*IHCQAA Trigger: AGCAGCTTGGCAGTGTATCCACAGGCTCCACACTGC...CATGCTGACCCCACGGAGCTCACACTGAGTGGTCTGGAGGCCTTCTCCTTTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| 3UTR CAA 72 bp | CCAGCAAACCACTTGGCGGAGTGCAGTGCATGCTGCTaGGCCGTCTTGTTGCTGATCCAGACACTGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PANHLAECSACC*AVLLLIQTLQS Trigger: GCTCTGCAGTGTCTGGATCAGCAACAAGACGGCCAAGCAGCATGCACTGCACTCCGCCAAGTGGTTTGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| CDS-3UTR TCA 90 bp | CTCAGTCAGGTCCATGAAATGCACGAAGAAGTCCCCCTGGTCCATCAGGAAGTAATCTTCCACCACAGCTaGCTCCTGGGAGGCCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSQVHEMHEEVPLVHQEVIFHHS*LLGGQG Trigger: CCCTTGGCCTCCCAGGAGTCAGCTGTGGTGGAAGAT...TACTTCCTGATGGACCAGGGGGACTTCTTCGTGCATTTCATGGACCTGACTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| CDS-3UTR GCA 90 bp | GCAGCACAGTGTAGCGCTGGTCCCAGTACTTGTCGTTGTAGTCCTCCTGGATCTCAAGGGCAATGTACCTaGTGCAGTGTGGAGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AAQCSAGPSTCRCSPPGSQGQCT*CSVEPV Trigger: CACAGGCTCCACACTGCAGCAGGTACATTGCCCTTG...AGATCCAGGAGGACTACAACGACAAGTACTGGGACCAGCGCTACACTGTGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| CDS-3UTR GCA 90 bp | AGGCCCTGCCTGTGCAGCTGTTCCAGCTGTGTGACCAGAATCAGGTATTCCTTTGGGCAATGTACCTGCTaGAGTGTGGAGCCTGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RPCLCSCSSCVTRIRYSFGQCTC*SVEPVD Trigger: ATCCACAGGCTCCACACTGCAGCAGGTACATTGCCC...AAAGGAATACCTGATTCTGGTCACACAGCTGGAACAGCTGCACAGGCAGGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| 3UTR CAA 72 bp | AGTTCAATCTTGAGGTCGTCTTTGAAGGGGTCAGTGTaGGCAGTGCTCATTCGCAGGGCCAGCTCCAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSILRSSLKGSV*AVLIRRASSNR Trigger: CCTGTTGGAGCTGGCCCTGCGAATGAGCACTGCCAACACTGACCCCTTCAAAGACGACCTCAAGATTGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| CDS-3UTR TCA 90 bp | AGGCCCTGCCTGTGCAGCTGTTCCAGCTGTGTGACCAGAATCAGGTATTCCTTTCCAAAGGCTGAGCAGTaGTATACCTGCCATCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: RPCLCSCSSCVTRIRYSFPKAEQ*YTCHPH Trigger: GTGTGGATGGCAGGTATATCACTGCTCAGCCTTTGG...AAAGGAATACCTGATTCTGGTCACACAGCTGGAACAGCTGCACAGGCAGGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| CDS-3UTR CCA 90 bp | AGGCAGTTGTCAAGGAAGCTTGTGTGGTGGCCAAGGACATCGTCAATGTTGGAGACCACAGCTGACTCCTaGGAGGCCAAGGGCAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: RQLSRKLVWWPRTSSMLETTADS*EAKGNV Trigger: TACATTGCCCTTGGCCTCCCAGGAGTCAGCTGTGGT...CTCCAACATTGACGATGTCCTTGGCCACCACACAAGCTTCCTTGACAACTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| 3UTR CAA 72 bp | TTAGAGGCTGCAACAGGGATGCTGAAGCTGGTGGTGTaGCTAGTTGCAGCACTAGCTGCAAGCTCAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LEAATGMLKLVV*LVAALAASSAL Trigger: AAGAGCTGAGCTTGCAGCTAGTGCTGCAACTAGCAACACCACCAGCTTCAGCATCCCTGTTGCAGCCTCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211261.2 |
||
| CDS-3UTR GCA 90 bp | CATGGGTCATTGCCTTTTCCTGCTTGGTCTCGATGGCCAGAACCCGCAAAAGCTGATACACTGCCAAGCTaGTTCCTCAGTTCCTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: HGSLPFPAWSRWPEPAKADTLPS*FLSSSS Trigger: GCTAGAGGAACTGAGGAAGCAGCTTGGCAGTGTATC...AGCTTTTGCGGGTTCTGGCCATCGAGACCAAGCAGGAAAAGGCAATGACCCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| CDS-3UTR GCA 90 bp | AGGCCCTGCCTGTGCAGCTGTTCCAGCTGTGTGACCAGAATCAGGTATTCCTTTAGTTGCAGCACTAGCTaGAAGCTCAGCTCTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RPCLCSCSSCVTRIRYSFSCSTS*KLSSFL Trigger: AAGGAAAGAGCTGAGCTTGCAGCTAGTGCTGCAACT...AAAGGAATACCTGATTCTGGTCACACAGCTGGAACAGCTGCACAGGCAGGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| CDS-3UTR GCA 90 bp | CTCAGTCAGGTCCATGAAATGCACGAAGAAGTCCCCCTGGTCCATCAGGAAGTAAGCCTGTGGATACACTaGCAAGCTGCTTCCTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSQVHEMHEEVPLVHQEVSLWIH*QAASSV Trigger: AACTGAGGAAGCAGCTTGGCAGTGTATCCACAGGCT...TACTTCCTGATGGACCAGGGGGACTTCTTCGTGCATTTCATGGACCTGACTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| CDS-3UTR TCA 90 bp | AGGCCCTGCCTGTGCAGCTGTTCCAGCTGTGTGACCAGAATCAGGTATTCCTTTAAAATTCTGCAATTTTaGCCTTGGCACTGTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPCLCSCSSCVTRIRYSFKILQF*PWHCGQ Trigger: CTGCCCACAGTGCCAAGGTCAAAATTGCAGAATTTT...AAAGGAATACCTGATTCTGGTCACACAGCTGGAACAGCTGCACAGGCAGGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| CDS-3UTR TCA 90 bp | TTCCTCCACCATGAACTCACTGTATGGGTCATGAATGATGCCCCTATAGATCCACTCCCAGCCAAAGGCTaGGCAGTGATATACCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FLHHELTVWVMNDAPIDPLPAKG*AVIYLP Trigger: TGGCAGGTATATCACTGCTCAGCCTTTGGCTGGGAG...TGGATCTATAGGGGCATCATTCATGACCCATACAGTGAGTTCATGGTGGAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| CDS-3UTR GCA 90 bp | ATGTCCTCCACTGGCTTCCTGAGCTCCTCCTCAGTCAGGTCCATGAAATGCACGAGTTCGAGAAAATTCTaGAATTTTGACCTTGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: MSSTGFLSSSSVRSMKCTSSRKF*NFDLGT Trigger: AGTGCCAAGGTCAAAATTGCAGAATTTTCTCGAACT...CGTGCATTTCATGGACCTGACTGAGGAGGAGCTCAGGAAGCCAGTGGAGGACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| CDS-3UTR GCA 90 bp | TTGTCAAGGAAGCTTGTGTGGTGGCCAAGGACATCGTCAATGTTGGAGGCAGATCTCAGCTCTTTCCTTTaGATTCTGTTGCAAAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LSRKLVWWPRTSSMLEADLSSFL*ILLQKL Trigger: CAGTTTTTGCAACAGAATGCAAAGGAAAGAGCTGAG...ATCTGCCTCCAACATTGACGATGTCCTTGGCCACCACACAAGCTTCCTTGACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| 3UTR CAA 72 bp | TCCAGTTTCATACTCTGTGTAAATTTCTGCATACAGTaGGTAAACATGACGCATACGGACATGAGCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSFILCVNFCIQ*VNMTHTDMSLE Trigger: CTCCAAGCTCATGTCCGTATGCGTCATGTTTACCAACTGTATGCAGAAATTTACACAGAGTATGAAACTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
||
| CDS CCA 90 bp | AGTAGCTGGCGGCCACAGGGAGGATTCTGTTTACTAGCTCCCGGATaGACAGGTCCAGGTTGGGGTCGACAAGGAAGGTACGGTTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSWRPQGGFCLLAPG*TGPGWGRQGRYGSA Trigger: GGCAGAACCGTACCTTCCTTGTCGACCCCAACCTGGACCTGTCCATCCGGGAGCTAGTAAACAGAATCCTCCCTGTGGCCGCCAGCTACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026547.9 ENSMUST00000211638.2 |
||
| CDS CCA 90 bp | CAGGGAGGATTCTGTTTACTAGCTCCCGGATGGACAGGTCCAGGTTaGGGTCGACAAGGAAGGTACGGTTCTGCCTCCCAGCCAAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QGGFCLLAPGWTGPG*GRQGRYGSASQPKA Trigger: AGCCTTTGGCTGGGAGGCAGAACCGTACCTTCCTTGTCGACCCCAACCTGGACCTGTCCATCCGGGAGCTAGTAAACAGAATCCTCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026547.9 ENSMUST00000211638.2 |
||
| CDS-3UTR CAA 90 bp | TCCACTGAGGTGGCAAGGGAGGCAAGGATGTCGATGGTGCGCATGGCTGGCTGGGAAAATTCTGCAATTTaGACCTTGGCACTGTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: STEVAREARMSMVRMAGWENSAI*TLALWA Trigger: TGCCCACAGTGCCAAGGTCAAAATTGCAGAATTTTC...CCAGCCAGCCATGCGCACCATCGACATCCTTGCCTCCCTTGCCACCTCAGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| CDS TCA 90 bp | CTCCTGGGAGGCCAAGGGCAATGTACCTATAGGCAAAACTGTGTCTaGGCTCAAGCCCGAGCCAATCAGGAAATCTCCAGCCAATGTTGG | + |
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Preference number: 5 (lower is better) Translates to: LLGGQGQCTYRQNCV*AQARANQEISSQCW Trigger: CCAACATTGGCTGGAGATTTCCTGATTGGCTCGGGCTTGAGCTCAGACACAGTTTTGCCTATAGGTACATTGCCCTTGGCCTCCCAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026547.9 ENSMUST00000211638.2 |
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| CDS TCA 90 bp | CGACAAGGAAGGTACGGTTCTGCCTCCCAGCCAAAGGCTGAGCAGTaGTATACCTGCCATCCACACCCACAAGCACATAGAGCAGATCTT | + |
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Preference number: 5 (lower is better) Translates to: RQGRYGSASQPKAEQ*YTCHPHPQAHRADL Trigger: AAGATCTGCTCTATGTGCTTGTGGGTGTGGATGGCAGGTATATCACTGCTCAGCCTTTGGCTGGGAGGCAGAACCGTACCTTCCTTGTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026547.9 ENSMUST00000210224.2 ENSMUST00000211638.2 |
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| CDS-3UTR CAA 90 bp | ATGTCCTCCACTGGCTTCCTGAGCTCCTCCTCAGTCAGGTCCATGAAATGCACGTCTGCAATTTTGACCTaGGCACTGTGGGCAGAGACT | + |
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Preference number: 5 (lower is better) Translates to: MSSTGFLSSSSVRSMKCTSAILT*ALWAET Trigger: AGTCTCTGCCCACAGTGCCAAGGTCAAAATTGCAGA...CGTGCATTTCATGGACCTGACTGAGGAGGAGCTCAGGAAGCCAGTGGAGGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| CDS-3UTR CAA 90 bp | AGGCAGTTGTCAAGGAAGCTTGTGTGGTGGCCAAGGACATCGTCAATGTTGGAGATGGACAGGTCCAGGTaGGGGTCGACAAGGAAGGTA | + |
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Preference number: 5 (lower is better) Translates to: RQLSRKLVWWPRTSSMLEMDRSR*GSTRKV Trigger: TACCTTCCTTGTCGACCCCAACCTGGACCTGTCCAT...CTCCAACATTGACGATGTCCTTGGCCACCACACAAGCTTCCTTGACAACTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| CDS-3UTR CAA 90 bp | GGGAGGCAAGGATGTCGATGGTGCGCATGGCTGGCTGGATGTAGAACCAGAGCTTTCCTTTGCATTCTGTaGCAAAAACTGAAGTGTCTC | + |
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Preference number: 5 (lower is better) Translates to: GRQGCRWCAWLAGCRTRAFLCIL*QKLKCL Trigger: GAGACACTTCAGTTTTTGCAACAGAATGCAAAGGAA...AGCTCTGGTTCTACATCCAGCCAGCCATGCGCACCATCGACATCCTTGCCTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| CDS-3UTR CAA 90 bp | AGGCAGTTGTCAAGGAAGCTTGTGTGGTGGCCAAGGACATCGTCAATGTTGGAGGCTCAGCTCTTTCCTTaGCATTCTGTTGCAAAAACT | + |
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Preference number: 5 (lower is better) Translates to: RQLSRKLVWWPRTSSMLEAQLFP*HSVAKT Trigger: AGTTTTTGCAACAGAATGCAAAGGAAAGAGCTGAGC...CTCCAACATTGACGATGTCCTTGGCCACCACACAAGCTTCCTTGACAACTGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| CDS CAA 90 bp | ACAGGGAGGATTCTGTTTACTAGCTCCCGGATGGACAGGTCCAGGTaGGGGTCGACAAGGAAGGTACGGTTCTGCCTCCCAGCCAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: TGRILFTSSRMDRSR*GSTRKVRFCLPAKG Trigger: GCCTTTGGCTGGGAGGCAGAACCGTACCTTCCTTGTCGACCCCAACCTGGACCTGTCCATCCGGGAGCTAGTAAACAGAATCCTCCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026547.9 ENSMUST00000211638.2 |
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| CDS CCA 72 bp | CGGCCACAGGGAGGATTCTGTTTACTAGCTCCCGGATaGACAGGTCCAGGTTGGGGTCGACAAGGAAGGTAC | + |
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Preference number: 6 (lower is better) Translates to: RPQGGFCLLAPG*TGPGWGRQGRY Trigger: GTACCTTCCTTGTCGACCCCAACCTGGACCTGTCCATCCGGGAGCTAGTAAACAGAATCCTCCCTGTGGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026547.9 ENSMUST00000211638.2 |
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| CDS TCA 72 bp | ACCCACAAGCACATAGAGCAGATCTTCCACCACAGCTaGCTCCTGGGAGGCCAAGGGCAATGTACCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: THKHIEQIFHHS*LLGGQGQCTCC Trigger: GCAGCAGGTACATTGCCCTTGGCCTCCCAGGAGTCAGCTGTGGTGGAAGATCTGCTCTATGTGCTTGTGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| CDS TCA 72 bp | ACAAGGAAGGTACGGTTCTGCCTCCCAGCCAAAGGCTaGGCAGTGATATACCTGCCATCCACACCCACAAGC | + |
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Preference number: 6 (lower is better) Translates to: TRKVRFCLPAKG*AVIYLPSTPTS Trigger: GCTTGTGGGTGTGGATGGCAGGTATATCACTGCTCAGCCTTTGGCTGGGAGGCAGAACCGTACCTTCCTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026547.9 ENSMUST00000210224.2 ENSMUST00000211638.2 |
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| CDS CAA 72 bp | ATTCTGTTTACTAGCTCCCGGATGGACAGGTCCAGGTaGGGGTCGACAAGGAAGGTACGGTTCTGCCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: ILFTSSRMDRSR*GSTRKVRFCLP Trigger: TGGGAGGCAGAACCGTACCTTCCTTGTCGACCCCAACCTGGACCTGTCCATCCGGGAGCTAGTAAACAGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026547.9 ENSMUST00000211638.2 |
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| CDS TCA 72 bp | ACCCACAAGCACATAGAGCAGATCTTCCACCACAGCTaGCTCCTGGGAGGCCAAGGGCAATGTACCTATAGG | + |
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Preference number: 6 (lower is better) Translates to: THKHIEQIFHHS*LLGGQGQCTYR Trigger: CCTATAGGTACATTGCCCTTGGCCTCCCAGGAGTCAGCTGTGGTGGAAGATCTGCTCTATGTGCTTGTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026547.9 ENSMUST00000211638.2 |
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| CDS TCA 72 bp | AGGTACGGTTCTGCCTCCCAGCCAAAGGCTGAGCAGTaGTATACCTGCCATCCACACCCACAAGCACATAGA | + |
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Preference number: 6 (lower is better) Translates to: RYGSASQPKAEQ*YTCHPHPQAHR Trigger: TCTATGTGCTTGTGGGTGTGGATGGCAGGTATATCACTGCTCAGCCTTTGGCTGGGAGGCAGAACCGTACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026547.9 ENSMUST00000210224.2 ENSMUST00000211638.2 |
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| CDS TCA 72 bp | GGCCAAGGGCAATGTACCTATAGGCAAAACTGTGTCTaGGCTCAAGCCCGAGCCAATCAGGAAATCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: GQGQCTYRQNCV*AQARANQEISS Trigger: GCTGGAGATTTCCTGATTGGCTCGGGCTTGAGCTCAGACACAGTTTTGCCTATAGGTACATTGCCCTTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026547.9 ENSMUST00000211638.2 |
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| CDS GCA 72 bp | AATGTACCTGCTGCAGTGTGGAGCCTGTGGATACACTaGCAAGCTGCTTCCTCAGTTCCTCTAGCTCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: NVPAAVWSLWIH*QAASSVPLALV Trigger: CACAAGAGCTAGAGGAACTGAGGAAGCAGCTTGGCAGTGTATCCACAGGCTCCACACTGCAGCAGGTACATT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210224.2 |
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| CDS CAA 90 bp | TATTTCTTTAAAAAGTCCTCAGGAGTTCGAGAAAATTCTGCAATTTaGACCTTGGCACTGTGGGCAGAGACTGTGGTTGTGACATACGGC | + |
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Preference number: 6 (lower is better) Translates to: YFFKKSSGVRENSAI*TLALWAETVVVTYG Trigger: GCCGTATGTCACAACCACAGTCTCTGCCCACAGTGCCAAGGTCAAAATTGCAGAATTTTCTCGAACTCCTGAGGACTTTTTAAAGAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026547.9 ENSMUST00000209574.2 ENSMUST00000210224.2 ENSMUST00000211638.2 |
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