Pregenerated sensors for TUBB4B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000036752

Ensembl transcript IDs: ENSMUST00000043584.5

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR GCA 72 bp	ATCTGTACAAGTGATGTCAGGACACAGGACAGCAAATaGACAGTGGACATGGCTAGCAGACAGGCTGTGAAT	+
Preference number: 3 (lower is better) Translates to: ICTSDVRTQDSK*TVDMASRQAVN Trigger: ATTCACAGCCTGTCTGCTAGCCATGTCCACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGTACAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043584.5
CDS-3UTR CCA 90 bp	ACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGTGGACATGGCTAGCAGACGTGGTAAGTGCCAGTaGGATCAATGCCATGCTCGT	+
Preference number: 4 (lower is better) Translates to: TSDVRTQDSKCTVDMASRRGKCQ*DQCHAR Trigger: ACGAGCATGGCATTGATCCCACTGGCACTTACCACG...TCTGCTAGCCATGTCCACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043584.5
CDS-3UTR TCA 90 bp	ACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGTGGACATGGCTAGCAGATTCCCAGCCCCACTCTaGCCAAAGACGAAGTTATCA	+
Preference number: 4 (lower is better) Translates to: TSDVRTQDSKCTVDMASRFPAPL*PKTKLS Trigger: TGATAACTTCGTCTTTGGTCAGAGTGGGGCTGGGAA...TCTGCTAGCCATGTCCACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043584.5
CDS-3UTR GCA 90 bp	TGTACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGTGGACATGGCTAGCTATCTCCGTGGTAAGTaGCAGTGGGATCAATGCCAT	+
Preference number: 4 (lower is better) Translates to: CTSDVRTQDSKCTVDMASYLRGK*QWDQCH Trigger: ATGGCATTGATCCCACTGGCACTTACCACGGAGATA...GCTAGCCATGTCCACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043584.5
CDS-3UTR CCA 90 bp	AATGGTGGTATCTGTACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGTGGTAGCGCCCATGTCTTaGATCACAGGCAGCCATCAT	+
Preference number: 4 (lower is better) Translates to: NGGICTSDVRTQDSKCTVVAPMS*ITGSHH Trigger: ATGATGGCTGCCTGTGATCCAAGACATGGGCGCTAC...CACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGTACAGATACCACCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043584.5
CDS-3UTR GCA 90 bp	TGTACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGTGGACATGGCTAGCAACATGGCTGTGAACTaGTCTGAGATGCGTTTGAAC	+
Preference number: 4 (lower is better) Translates to: CTSDVRTQDSKCTVDMASNMAVN*SEMRLN Trigger: GTTCAAACGCATCTCAGAGCAGTTCACAGCCATGTT...GCTAGCCATGTCCACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043584.5
CDS-3UTR CCA 90 bp	AATGGTGGTATCTGTACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGTGGTGTTTTCAACCAGCTaGTGGACTGAAAGGGTGGCA	+
Preference number: 4 (lower is better) Translates to: NGGICTSDVRTQDSKCTVVFSTS*WTERVA Trigger: TGCCACCCTTTCAGTCCACCAGCTGGTTGAAAACAC...CACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGTACAGATACCACCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043584.5
CDS-3UTR CAA 90 bp	CAAGTGATGTCAGGACACAGGACAGCAAATGCACAGTGGACATGGCTAGCAGACGCGCGGGGCACATACTaGCCACCGGTGGCTTCGTTG	+
Preference number: 5 (lower is better) Translates to: QVMSGHRTANAQWTWLADARGTY*PPVASL Trigger: CAACGAAGCCACCGGTGGCAAGTATGTGCCCCGCGC...GTCTGCTAGCCATGTCCACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043584.5
CDS-3UTR CAA 90 bp	GGTGGTATCTGTACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGTGGACACTGTGTCCGACACCTaGGGGGAAGGTACCACACTG	+
Preference number: 5 (lower is better) Translates to: GGICTSDVRTQDSKCTVDTVSDT*GEGTTL Trigger: CAGTGTGGTACCTTCCCCCAAGGTGTCGGACACAGT...GTCCACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGTACAGATACCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043584.5