Pregenerated sensors for TUBAL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021216Ensembl transcript IDs: ENSMUST00000021639.8
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGCTATCCCTAAATCCTGGGTGGGAAGAAATGGAGGCTCCACATTaGTCAGGTGATTCAAAAAGGACTCAAGACAGAAGAGTTCCAAGG | + |
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Preference number: 1 (lower is better) Translates to: QLSLNPGWEEMEAPH*SGDSKRTQDRRVPR Trigger: CCTTGGAACTCTTCTGTCTTGAGTCCTTTTTGAATCACCTGAGCAATGTGGAGCCTCCATTTCTTCCCACCCAGGATTTAGGGATAGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| 3UTR TCA 90 bp | AGTTCATGGAGAGACTCTGCCTCAGCAAACAAAGTGGAAAGAGATTaGGAGAATCACTTGTTAGAAGCTTCTGGCTGCCACTTGACATGG | + |
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Preference number: 1 (lower is better) Translates to: SSWRDSASANKVERD*ENHLLEASGCHLTW Trigger: CCATGTCAAGTGGCAGCCAGAAGCTTCTAACAAGTGATTCTCTCAATCTCTTTCCACTTTGTTTGCTGAGGCAGAGTCTCTCCATGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| 3UTR CCA 90 bp | CTGCTCTTCCAGAGGTCCTTAGTTCAATTTCCAGGAACCACATGGTaGCTCACAACCTTTGTTAAAGTTTTTGGTTTTGTTGCTGTTGTT | + |
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Preference number: 1 (lower is better) Translates to: LLFQRSLVQFPGTTW*LTTFVKVFGFVAVV Trigger: AACAACAGCAACAAAACCAAAAACTTTAACAAAGGTTGTGAGCCACCATGTGGTTCCTGGAAATTGAACTAAGGACCTCTGGAAGAGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| 3UTR TCA 90 bp | GGAAACCGAGAGAGACTATCTTGGTTGGATTTTATGATACCATTATaGCAGATAGGAGTGGATTGTAGTTGGTATGAGTTGGGAAAGACT | + |
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Preference number: 1 (lower is better) Translates to: GNRERLSWLDFMIPL*QIGVDCSWYELGKT Trigger: AGTCTTTCCCAACTCATACCAACTACAATCCACTCCTATCTGTCATAATGGTATCATAAAATCCAACCAAGATAGTCTCTCTCGGTTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| 3UTR TCA 90 bp | AGGAATCAGTACTTTCTTACCTGCAGGATACTCATATCCAAATTCTaGAAAGTGACCAGCAGTATTCTTGTTTGTTGGCTTTCTTCCTTA | + |
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Preference number: 1 (lower is better) Translates to: RNQYFLTCRILISKF*KVTSSILVCWLSSL Trigger: TAAGGAAGAAAGCCAACAAACAAGAATACTGCTGGTCACTTTTCAGAATTTGGATATGAGTATCCTGCAGGTAAGAAAGTACTGATTCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| 3UTR CAA 90 bp | AGGCATGGCTGCCCACCTCTAATCCCTGGACCTGAGAGCAAGAACTaGCCTGGACTAGCTACCTCAGTTCATGGAGAGACTCTGCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: RHGCPPLIPGPESKN*PGLATSVHGETLPQ Trigger: CTGAGGCAGAGTCTCTCCATGAACTGAGGTAGCTAGTCCAGGCAAGTTCTTGCTCTCAGGTCCAGGGATTAGAGGTGGGCAGCCATGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| 3UTR-3UTR TCA 90 bp | AAAAATAGGGAGTCAGGCTGGAGAGATGGCACTAACTGCTCTTCCAGAGGTCCTCTTCTGGCTGCCACTTaGCATGGCCACATGCCATAC | + |
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Preference number: 2 (lower is better) Translates to: KNRESGWRDGTNCSSRGPLLAAT*HGHMPY Trigger: GTATGGCATGTGGCCATGTCAAGTGGCAGCCAGAAG...AGGACCTCTGGAAGAGCAGTTAGTGCCATCTCTCCAGCCTGACTCCCTATTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| 3UTR-3UTR GCA 90 bp | AAAAATAGGGAGTCAGGCTGGAGAGATGGCACTAACTGCTCTTCCAGAGGTCCTCACATGCCATACTCCTaGAGACATACAAACATGCAC | + |
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Preference number: 2 (lower is better) Translates to: KNRESGWRDGTNCSSRGPHMPYS*RHTNMH Trigger: GTGCATGTTTGTATGTCTGCAGGAGTATGGCATGTG...AGGACCTCTGGAAGAGCAGTTAGTGCCATCTCTCCAGCCTGACTCCCTATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGGTGGGAAGAAATGGAGGCTCCACATTGCTCAGGTGATTCAAAAAGGACTCCCAGGAACCACATGGTaGCTCACAACCTTTGTTAAA | + |
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Preference number: 2 (lower is better) Translates to: LGGKKWRLHIAQVIQKGLPGTTW*LTTFVK Trigger: TTTAACAAAGGTTGTGAGCCACCATGTGGTTCCTGG...GAGTCCTTTTTGAATCACCTGAGCAATGTGGAGCCTCCATTTCTTCCCACCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| 3UTR-3UTR CCA 90 bp | CAGATAGGAGTGGATTGTAGTTGGTATGAGTTGGGAAAGACTCTGCTCATCATTCTTGTTAGAAGCTTCTaGCTGCCACTTGACATGGCC | + |
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Preference number: 2 (lower is better) Translates to: QIGVDCSWYELGKTLLIILVRSF*LPLDMA Trigger: GGCCATGTCAAGTGGCAGCCAGAAGCTTCTAACAAG...AATGATGAGCAGAGTCTTTCCCAACTCATACCAACTACAATCCACTCCTATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| 3UTR-3UTR GCA 90 bp | CATTGCTCAGGTGATTCAAAAAGGACTCAAGACAGAAGAGTTCCAAGGTTTCTGGTCCAGGGGATAAAGTaGTTGGTGAACAAGTGTAAA | + |
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Preference number: 2 (lower is better) Translates to: HCSGDSKRTQDRRVPRFLVQGIK*LVNKCK Trigger: TTTACACTTGTTCACCAAGCACTTTATCCCCTGGAC...CAGAAACCTTGGAACTCTTCTGTCTTGAGTCCTTTTTGAATCACCTGAGCAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| 3UTR-3UTR TCA 90 bp | CAGATAGGAGTGGATTGTAGTTGGTATGAGTTGGGAAAGACTCTGCTCATCATTCTTCCTTATTTTGTTTaGAAAGCAAACTGGGGACTT | + |
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Preference number: 2 (lower is better) Translates to: QIGVDCSWYELGKTLLIILPYFV*KANWGL Trigger: AAGTCCCCAGTTTGCTTTTCAAACAAAATAAGGAAG...AATGATGAGCAGAGTCTTTCCCAACTCATACCAACTACAATCCACTCCTATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| 3UTR-3UTR TCA 90 bp | CATTGCTCAGGTGATTCAAAAAGGACTCAAGACAGAAGAGTTCCAAGGTTTCTGCCAAATTCTGAAAAGTaGCCAGCAGTATTCTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: HCSGDSKRTQDRRVPRFLPNSEK*PAVFLF Trigger: AAACAAGAATACTGCTGGTCACTTTTCAGAATTTGG...CAGAAACCTTGGAACTCTTCTGTCTTGAGTCCTTTTTGAATCACCTGAGCAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| 3UTR-3UTR TCA 90 bp | GAGAGACTCTGCCTCAGCAAACAAAGTGGAAAGAGATTGAGAGAATCACTTGTTCTCATATCCAAATTCTaGAAAGTGACCAGCAGTATT | + |
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Preference number: 2 (lower is better) Translates to: ERLCLSKQSGKRLRESLVLISKF*KVTSSI Trigger: AATACTGCTGGTCACTTTTCAGAATTTGGATATGAG...AACAAGTGATTCTCTCAATCTCTTTCCACTTTGTTTGCTGAGGCAGAGTCTCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| 3UTR-3UTR CCA 90 bp | CAGATAGGAGTGGATTGTAGTTGGTATGAGTTGGGAAAGACTCTGCTCATCATTTGCATCTTGCTGATTTaGTTTTTGCTTTCCTCTAAT | + |
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Preference number: 2 (lower is better) Translates to: QIGVDCSWYELGKTLLIICILLI*FLLSSN Trigger: ATTAGAGGAAAGCAAAAACCAAATCAGCAAGATGCA...AATGATGAGCAGAGTCTTTCCCAACTCATACCAACTACAATCCACTCCTATCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| 3UTR TCA 72 bp | AAGAAGGCATGGCTGCCCACCTCTAATCCCTGGACCTaGGAGCAAGAACTTGCCTGGACTAGCTACCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: KKAWLPTSNPWT*EQELAWTSYLS Trigger: ACTGAGGTAGCTAGTCCAGGCAAGTTCTTGCTCTCAGGTCCAGGGATTAGAGGTGGGCAGCCATGCCTTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| 3UTR CCA 72 bp | ACAGAGAAATTCCATAGCTCAGCTATCCCTAAATCCTaGGTGGGAAGAAATGGAGGCTCCACATTGCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: TEKFHSSAIPKS*VGRNGGSTLLR Trigger: CCTGAGCAATGTGGAGCCTCCATTTCTTCCCACCCAGGATTTAGGGATAGCTGAGCTATGGAATTTCTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| 3UTR TCA 72 bp | TGGGTGGGAAGAAATGGAGGCTCCACATTGCTCAGGTaGTTCAAAAAGGACTCAAGACAGAAGAGTTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: WVGRNGGSTLLR*FKKDSRQKSSK Trigger: CTTGGAACTCTTCTGTCTTGAGTCCTTTTTGAATCACCTGAGCAATGTGGAGCCTCCATTTCTTCCCACCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| 3UTR CCA 72 bp | AGAAATTCCATAGCTCAGCTATCCCTAAATCCTGGGTaGGAAGAAATGGAGGCTCCACATTGCTCAGGTGAT | + |
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Preference number: 3 (lower is better) Translates to: RNSIAQLSLNPG*EEMEAPHCSGD Trigger: ATCACCTGAGCAATGTGGAGCCTCCATTTCTTCCCACCCAGGATTTAGGGATAGCTGAGCTATGGAATTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| 3UTR-3UTR CAA 90 bp | AATTTCCAGGAACCACATGGTGGCTCACAACCTTTGTTAAAGTTTTTGGTTTTGGCTTCTGGCTGCCACTaGACATGGCCACATGCCATA | + |
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Preference number: 3 (lower is better) Translates to: NFQEPHGGSQPLLKFLVLASGCH*TWPHAI Trigger: TATGGCATGTGGCCATGTCAAGTGGCAGCCAGAAGC...CAAAACCAAAAACTTTAACAAAGGTTGTGAGCCACCATGTGGTTCCTGGAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| 3UTR GCA 72 bp | CTAAATCCTGGGTGGGAAGAAATGGAGGCTCCACATTaGTCAGGTGATTCAAAAAGGACTCAAGACAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: LNPGWEEMEAPH*SGDSKRTQDRR Trigger: TCTTCTGTCTTGAGTCCTTTTTGAATCACCTGAGCAATGTGGAGCCTCCATTTCTTCCCACCCAGGATTTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| 3UTR CCA 72 bp | CAAAAAGGACTCAAGACAGAAGAGTTCCAAGGTTTCTaGGAACAAGTGACCTCGGAATTACATAACTGGCCA | + |
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Preference number: 3 (lower is better) Translates to: QKGLKTEEFQGF*EQVTSELHNWP Trigger: TGGCCAGTTATGTAATTCCGAGGTCACTTGTTCCCAGAAACCTTGGAACTCTTCTGTCTTGAGTCCTTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| 3UTR-3UTR CAA 90 bp | CATTGCTCAGGTGATTCAAAAAGGACTCAAGACAGAAGAGTTCCAAGGTTTCTGCAAAGTGGAAAGAGATaGAGAGAATCACTTGTTAGA | + |
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Preference number: 3 (lower is better) Translates to: HCSGDSKRTQDRRVPRFLQSGKR*RESLVR Trigger: TCTAACAAGTGATTCTCTCAATCTCTTTCCACTTTG...CAGAAACCTTGGAACTCTTCTGTCTTGAGTCCTTTTTGAATCACCTGAGCAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| 3UTR CCA 72 bp | CAGAGGTCCTTAGTTCAATTTCCAGGAACCACATGGTaGCTCACAACCTTTGTTAAAGTTTTTGGTTTTGTT | + |
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Preference number: 3 (lower is better) Translates to: QRSLVQFPGTTW*LTTFVKVFGFV Trigger: AACAAAACCAAAAACTTTAACAAAGGTTGTGAGCCACCATGTGGTTCCTGGAAATTGAACTAAGGACCTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| 3UTR CCA 72 bp | TTCCAGAGGTCCTTAGTTCAATTTCCAGGAACCACATaGTGGCTCACAACCTTTGTTAAAGTTTTTGGTTTT | + |
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Preference number: 3 (lower is better) Translates to: FQRSLVQFPGTT*WLTTFVKVFGF Trigger: AAAACCAAAAACTTTAACAAAGGTTGTGAGCCACCATGTGGTTCCTGGAAATTGAACTAAGGACCTCTGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| 3UTR CCA 72 bp | CGGAATTACATAACTGGCCATAGGCCAAGTATATTCTaGAAACCGAGAGAGACTATCTTGGTTGGATTTTAT | + |
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Preference number: 3 (lower is better) Translates to: RNYITGHRPSIF*KPRETILVGFY Trigger: ATAAAATCCAACCAAGATAGTCTCTCTCGGTTTCCAGAATATACTTGGCCTATGGCCAGTTATGTAATTCCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| 3UTR-3UTR CAA 90 bp | AATTTCCAGGAACCACATGGTGGCTCACAACCTTTGTTAAAGTTTTTGGTTTTGGCTTTCTTCCTTATTTaGTTTGAAAAGCAAACTGGG | + |
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Preference number: 3 (lower is better) Translates to: NFQEPHGGSQPLLKFLVLAFFLI*FEKQTG Trigger: CCCAGTTTGCTTTTCAAACAAAATAAGGAAGAAAGC...CAAAACCAAAAACTTTAACAAAGGTTGTGAGCCACCATGTGGTTCCTGGAAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| 3UTR TCA 72 bp | TACTTTCTTACCTGCAGGATACTCATATCCAAATTCTaGAAAGTGACCAGCAGTATTCTTGTTTGTTGGCTT | + |
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Preference number: 3 (lower is better) Translates to: YFLTCRILISKF*KVTSSILVCWL Trigger: AAGCCAACAAACAAGAATACTGCTGGTCACTTTTCAGAATTTGGATATGAGTATCCTGCAGGTAAGAAAGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS-3UTR TCA 90 bp | CTGGGTGGGAAGAAATGGAGGCTCCACATTGCTCAGGTGATTCAAAAAGGACTCTTCTGGGTGGAAGAGTaGGTGGTACCTCCCCACACG | + |
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Preference number: 4 (lower is better) Translates to: LGGKKWRLHIAQVIQKGLFWVEE*VVPPHT Trigger: CGTGTGGGGAGGTACCACTCACTCTTCCACCCAGAA...GAGTCCTTTTTGAATCACCTGAGCAATGTGGAGCCTCCATTTCTTCCCACCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS-3UTR TCA 90 bp | AAAAATAGGGAGTCAGGCTGGAGAGATGGCACTAACTGCTCTTCCAGAGGTCCTTGGTGGAGTGAGTGGTaGGGATGGCATTGTACGGTT | + |
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Preference number: 4 (lower is better) Translates to: KNRESGWRDGTNCSSRGPWWSEW*GWHCTV Trigger: AACCGTACAATGCCATCCTCACCACTCACTCCACCA...AGGACCTCTGGAAGAGCAGTTAGTGCCATCTCTCCAGCCTGACTCCCTATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS-3UTR TCA 90 bp | AAAAATAGGGAGTCAGGCTGGAGAGATGGCACTAACTGCTCTTCCAGAGGTCCTCTAGAACAAGCTCGATaGCCTCTGAACCCACAGAGT | + |
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Preference number: 4 (lower is better) Translates to: KNRESGWRDGTNCSSRGPLEQAR*PLNPQS Trigger: ACTCTGTGGGTTCAGAGGTCATCGAGCTTGTTCTAG...AGGACCTCTGGAAGAGCAGTTAGTGCCATCTCTCCAGCCTGACTCCCTATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS-3UTR TCA 90 bp | GAGATGGCACTAACTGCTCTTCCAGAGGTCCTTAGTTCAATTTCCAGGAACCACTGGGGGCAAGAGCTGTaGTGGGGAAATGGATTCTTG | + |
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Preference number: 4 (lower is better) Translates to: EMALTALPEVLSSISRNHWGQEL*WGNGFL Trigger: CAAGAATCCATTTCCCCATCACAGCTCTTGCCCCCA...GTGGTTCCTGGAAATTGAACTAAGGACCTCTGGAAGAGCAGTTAGTGCCATCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS-3UTR CCA 90 bp | CTGGGTGGGAAGAAATGGAGGCTCCACATTGCTCAGGTGATTCAAAAAGGACTCTGGTACCACTGCAGGTaGCTGATAATTGATGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: LGGKKWRLHIAQVIQKGLWYHCR*LIIDAH Trigger: GTGGGCATCAATTATCAGCCACCTGCAGTGGTACCA...GAGTCCTTTTTGAATCACCTGAGCAATGTGGAGCCTCCATTTCTTCCCACCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS-3UTR GCA 90 bp | CTGGGTGGGAAGAAATGGAGGCTCCACATTGCTCAGGTGATTCAAAAAGGACTCTCAATGCCAAGTTTGTaGTGGCAGATGTCGTACAGA | + |
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Preference number: 4 (lower is better) Translates to: LGGKKWRLHIAQVIQKGLSMPSL*WQMSYR Trigger: TCTGTACGACATCTGCCAGCACAAACTTGGCATTGA...GAGTCCTTTTTGAATCACCTGAGCAATGTGGAGCCTCCATTTCTTCCCACCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS-3UTR TCA 90 bp | CTGGGTGGGAAGAAATGGAGGCTCCACATTGCTCAGGTGATTCAAAAAGGACTCCATGAAAGCACAATCTaGGTATTCTATGGTGGAGTG | + |
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Preference number: 4 (lower is better) Translates to: LGGKKWRLHIAQVIQKGLHESTI*VFYGGV Trigger: CACTCCACCATAGAATACTCAGATTGTGCTTTCATG...GAGTCCTTTTTGAATCACCTGAGCAATGTGGAGCCTCCATTTCTTCCCACCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS-3UTR TCA 90 bp | AACAGAGTTCAGACCTCTAGTATCCACATAAATTCAAAGAAGGCATGGCTGCCCCAAAGCAAGAAGCAGTaGCGTCAGACACAGAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: NRVQTSSIHINSKKAWLPQSKKQ*RQTQRA Trigger: AGCTCTCTGTGTCTGACGTCACTGCTTCTTGCTTTG...GGGCAGCCATGCCTTCTTTGAATTTATGTGGATACTAGAGGTCTGAACTCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS-3UTR CCA 90 bp | GAGATGGCACTAACTGCTCTTCCAGAGGTCCTTAGTTCAATTTCCAGGAACCACTCACACTTGACCAACTaGTTGGAGACCTCAAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: EMALTALPEVLSSISRNHSHLTN*LETSKQ Trigger: TTGCTTTGAGGTCTCCAACCAGTTGGTCAAGTGTGA...GTGGTTCCTGGAAATTGAACTAAGGACCTCTGGAAGAGCAGTTAGTGCCATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS-3UTR CCA 90 bp | CAGATAGGAGTGGATTGTAGTTGGTATGAGTTGGGAAAGACTCTGCTCATCATTCAGCCAGATCTTCCCTaGCCTCTACAAACTCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: QIGVDCSWYELGKTLLIIQPDLP*PLQTPQ Trigger: TTGGGGAGTTTGTAGAGGCCAGGGAAGATCTGGCTG...AATGATGAGCAGAGTCTTTCCCAACTCATACCAACTACAATCCACTCCTATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS-3UTR TCA 90 bp | AACAGAGTTCAGACCTCTAGTATCCACATAAATTCAAAGAAGGCATGGCTGCCCTCCTTCAAAACGCAGTaGTGCAGTGATGGAAGACGA | + |
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Preference number: 4 (lower is better) Translates to: NRVQTSSIHINSKKAWLPSFKTQ*CSDGRR Trigger: TCGTCTTCCATCACTGCATCACTGCGTTTTGAAGGA...GGGCAGCCATGCCTTCTTTGAATTTATGTGGATACTAGAGGTCTGAACTCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS-3UTR GCA 90 bp | ACTCCCTTAATGCGTTGTTTTAGGGAAGGGGAAAGAATAAAGCCAGTCTTGTCCTCAGACACAGAGAGCTaGTCTTGGTACGCCTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: TPLMRCFREGERIKPVLSSDTES*SWYAFS Trigger: TGAAAAGGCGTACCAAGAGCAGCTCTCTGTGTCTGA...GGACAAGACTGGCTTTATTCTTTCCCCTTCCCTAAAACAACGCATTAAGGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS-3UTR GCA 90 bp | ACTCCCTTAATGCGTTGTTTTAGGGAAGGGGAAAGAATAAAGCCAGTCTTGTCCCCAGGCTTCCACAATTaGTGTGGTGTTGCTCAACAT | + |
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Preference number: 4 (lower is better) Translates to: TPLMRCFREGERIKPVLSPGFHN*CGVAQH Trigger: ATGTTGAGCAACACCACAGCAATTGTGGAAGCCTGG...GGACAAGACTGGCTTTATTCTTTCCCCTTCCCTAAAACAACGCATTAAGGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS-3UTR CCA 90 bp | AACAGAGTTCAGACCTCTAGTATCCACATAAATTCAAAGAAGGCATGGCTGCCCACAAGTTGTTCTGGGTaGAAGAGTGAGTGGTACCTC | + |
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Preference number: 4 (lower is better) Translates to: NRVQTSSIHINSKKAWLPTSCSG*KSEWYL Trigger: GAGGTACCACTCACTCTTCCACCCAGAACAACTTGT...GGGCAGCCATGCCTTCTTTGAATTTATGTGGATACTAGAGGTCTGAACTCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| 3UTR CAA 72 bp | GAGAGACTCTGCCTCAGCAAACAAAGTGGAAAGAGATaGAGAGAATCACTTGTTAGAAGCTTCTGGCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: ERLCLSKQSGKR*RESLVRSFWLP Trigger: TGGCAGCCAGAAGCTTCTAACAAGTGATTCTCTCAATCTCTTTCCACTTTGTTTGCTGAGGCAGAGTCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS-3UTR TCA 90 bp | CATTGCTCAGGTGATTCAAAAAGGACTCAAGACAGAAGAGTTCCAAGGTTTCTGTATTCTATGGTGGAGTaGGTGGTGAGGATGGCATTG | + |
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Preference number: 4 (lower is better) Translates to: HCSGDSKRTQDRRVPRFLYSMVE*VVRMAL Trigger: CAATGCCATCCTCACCACTCACTCCACCATAGAATA...CAGAAACCTTGGAACTCTTCTGTCTTGAGTCCTTTTTGAATCACCTGAGCAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS-3UTR GCA 90 bp | CAGATAGGAGTGGATTGTAGTTGGTATGAGTTGGGAAAGACTCTGCTCATCATTGTACCAGTGCAGGAATaGCTTCTTGGCATACATGAG | + |
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Preference number: 4 (lower is better) Translates to: QIGVDCSWYELGKTLLIIVPVQE*LLGIHE Trigger: CTCATGTATGCCAAGAAGGCATTCCTGCACTGGTAC...AATGATGAGCAGAGTCTTTCCCAACTCATACCAACTACAATCCACTCCTATCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS-3UTR GCA 90 bp | CAGATAGGAGTGGATTGTAGTTGGTATGAGTTGGGAAAGACTCTGCTCATCATTTCTGTGATGTACCAGTaGAGGAATGCCTTCTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: QIGVDCSWYELGKTLLIISVMYQ*RNAFLA Trigger: TGCCAAGAAGGCATTCCTGCACTGGTACATCACAGA...AATGATGAGCAGAGTCTTTCCCAACTCATACCAACTACAATCCACTCCTATCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS-3UTR CCA 90 bp | CATTGCTCAGGTGATTCAAAAAGGACTCAAGACAGAAGAGTTCCAAGGTTTCTGCAGAATAAAGCCATCTaGCTGGATCCCATGTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: HCSGDSKRTQDRRVPRFLQNKAI*LDPMFQ Trigger: CTGGAACATGGGATCCAGCCAGATGGCTTTATTCTG...CAGAAACCTTGGAACTCTTCTGTCTTGAGTCCTTTTTGAATCACCTGAGCAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS-3UTR CCA 90 bp | CAGAATAGGCCACCTAGAGAAGGAATCAGTACTTTCTTACCTGCAGGATACTCACTTCCACAATTGCTGTaGTGTTGCTCAACATGCACA | + |
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Preference number: 4 (lower is better) Translates to: QNRPPREGISTFLPAGYSLPQLL*CCSTCT Trigger: TGTGCATGTTGAGCAACACCACAGCAATTGTGGAAG...TGAGTATCCTGCAGGTAAGAAAGTACTGATTCCTTCTCTAGGTGGCCTATTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS-3UTR TCA 90 bp | CAGAATAGGCCACCTAGAGAAGGAATCAGTACTTTCTTACCTGCAGGATACTCACACCAATCAACAAACTaGACAGAGGTCCTAGATTTC | + |
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Preference number: 4 (lower is better) Translates to: QNRPPREGISTFLPAGYSHQSTN*TEVLDF Trigger: GAAATCTAGGACCTCTGTTCAGTTTGTTGATTGGTG...TGAGTATCCTGCAGGTAAGAAAGTACTGATTCCTTCTCTAGGTGGCCTATTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS-3UTR GCA 90 bp | GAGATGGCACTAACTGCTCTTCCAGAGGTCCTTAGTTCAATTTCCAGGAACCACCCAATTTTATCTTCTTaGAATACTCTACGGAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: EMALTALPEVLSSISRNHPILSS*NTLRRV Trigger: GACTCTCCGTAGAGTATTGCAAGAAGATAAAATTGG...GTGGTTCCTGGAAATTGAACTAAGGACCTCTGGAAGAGCAGTTAGTGCCATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS-3UTR GCA 90 bp | GAGATGGCACTAACTGCTCTTCCAGAGGTCCTTAGTTCAATTTCCAGGAACCACCCTAGATTTCATGGCTaGAATTGCTTCATTTACATC | + |
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Preference number: 4 (lower is better) Translates to: EMALTALPEVLSSISRNHPRFHG*NCFIYI Trigger: GATGTAAATGAAGCAATTGCAGCCATGAAATCTAGG...GTGGTTCCTGGAAATTGAACTAAGGACCTCTGGAAGAGCAGTTAGTGCCATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS-3UTR GCA 90 bp | CATATCCAAATTCTGAAAAGTGACCAGCAGTATTCTTGTTTGTTGGCTTTCTTCAGTGTTCTGGGCACATaGTTCCCAGCTCTTGTCTCA | + |
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Preference number: 4 (lower is better) Translates to: HIQILKSDQQYSCLLAFFSVLGT*FPALVS Trigger: TGAGACAAGAGCTGGGAAGCATGTGCCCAGAACACT...GAAGAAAGCCAACAAACAAGAATACTGCTGGTCACTTTTCAGAATTTGGATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS-3UTR GCA 90 bp | CATTGCTCAGGTGATTCAAAAAGGACTCAAGACAGAAGAGTTCCAAGGTTTCTGTTTCATGGCTGCAATTaGTTCATTTACATCCTTAGG | + |
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Preference number: 4 (lower is better) Translates to: HCSGDSKRTQDRRVPRFLFHGCN*FIYILR Trigger: CCTAAGGATGTAAATGAAGCAATTGCAGCCATGAAA...CAGAAACCTTGGAACTCTTCTGTCTTGAGTCCTTTTTGAATCACCTGAGCAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS TCA 90 bp | TGCATTGTTCTGCCAGCTTCCGGATCCTTTCTAGAACAAGCTCGATaGCCTCTGAACCCACAGAGTAGCGACCTCGTGCGTAGGTGTTGG | + |
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Preference number: 5 (lower is better) Translates to: CIVLPASGSFLEQAR*PLNPQSSDLVRRCW Trigger: CCAACACCTACGCACGAGGTCGCTACTCTGTGGGTTCAGAGGTCATCGAGCTTGTTCTAGAAAGGATCCGGAAGCTGGCAGAACAATGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS-3UTR CAA 90 bp | AACAGAGTTCAGACCTCTAGTATCCACATAAATTCAAAGAAGGCATGGCTGCCCCGTTCAATGCCAAGTTaGTGCTGGCAGATGTCGTAC | + |
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Preference number: 5 (lower is better) Translates to: NRVQTSSIHINSKKAWLPRSMPS*CWQMSY Trigger: GTACGACATCTGCCAGCACAAACTTGGCATTGAACG...GGGCAGCCATGCCTTCTTTGAATTTATGTGGATACTAGAGGTCTGAACTCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS-3UTR CAA 90 bp | ACTCCCTTAATGCGTTGTTTTAGGGAAGGGGAAAGAATAAAGCCAGTCTTGTCCCATGCTTCCCAGCTCTaGTCTCATGAAAGAAGGTAT | + |
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Preference number: 5 (lower is better) Translates to: TPLMRCFREGERIKPVLSHASQL*SHERRY Trigger: ATACCTTCTTTCATGAGACAAGAGCTGGGAAGCATG...GGACAAGACTGGCTTTATTCTTTCCCCTTCCCTAAAACAACGCATTAAGGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS-3UTR CAA 90 bp | CAGATAGGAGTGGATTGTAGTTGGTATGAGTTGGGAAAGACTCTGCTCATCATTTCGTACAGAGCCTCATaGTCCACCATGAAAGCACAA | + |
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Preference number: 5 (lower is better) Translates to: QIGVDCSWYELGKTLLIISYRAS*STMKAQ Trigger: TTGTGCTTTCATGGTGGACAATGAGGCTCTGTACGA...AATGATGAGCAGAGTCTTTCCCAACTCATACCAACTACAATCCACTCCTATCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS-3UTR CAA 90 bp | GAGAGACTCTGCCTCAGCAAACAAAGTGGAAAGAGATTGAGAGAATCACTTGTTTGGGGAAATGGATTCTaGGATAAGGTACTAGGTTGG | + |
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Preference number: 5 (lower is better) Translates to: ERLCLSKQSGKRLRESLVWGNGF*DKVLGW Trigger: CCAACCTAGTACCTTATCCAAGAATCCATTTCCCCA...AACAAGTGATTCTCTCAATCTCTTTCCACTTTGTTTGCTGAGGCAGAGTCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS-3UTR CAA 90 bp | CAGAATAGGCCACCTAGAGAAGGAATCAGTACTTTCTTACCTGCAGGATACTCATCCAATTTTATCTTCTaGCAATACTCTACGGAGAGT | + |
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Preference number: 5 (lower is better) Translates to: QNRPPREGISTFLPAGYSSNFIF*QYSTES Trigger: ACTCTCCGTAGAGTATTGCAAGAAGATAAAATTGGA...TGAGTATCCTGCAGGTAAGAAAGTACTGATTCCTTCTCTAGGTGGCCTATTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS TCA 72 bp | CTGCCAGCTTCCGGATCCTTTCTAGAACAAGCTCGATaGCCTCTGAACCCACAGAGTAGCGACCTCGTGCGT | + |
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Preference number: 6 (lower is better) Translates to: LPASGSFLEQAR*PLNPQSSDLVR Trigger: ACGCACGAGGTCGCTACTCTGTGGGTTCAGAGGTCATCGAGCTTGTTCTAGAAAGGATCCGGAAGCTGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS TCA 72 bp | CTCCTTTCCATTCACAAGTTGTTCTGGGTGGAAGAGTaGGTGGTACCTCCCCACACGGATCCCATCTATAAC | + |
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Preference number: 6 (lower is better) Translates to: LLSIHKLFWVEE*VVPPHTDPIYN Trigger: GTTATAGATGGGATCCGTGTGGGGAGGTACCACTCACTCTTCCACCCAGAACAACTTGTGAATGGAAAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS CAA 72 bp | CATATGTTCCACTTTAGGATTTTCCAAATTATCATGTaGATGGTCCAGAATAAAGCCATCTGGCTGGATCCC | + |
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Preference number: 6 (lower is better) Translates to: HMFHFRIFQIIM*MVQNKAIWLDP Trigger: GGGATCCAGCCAGATGGCTTTATTCTGGACCATCAACATGATAATTTGGAAAATCCTAAAGTGGAACATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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| CDS TCA 72 bp | ATATGTTCCACTTTAGGATTTTCCAAATTATCATGTTaGTGGTCCAGAATAAAGCCATCTGGCTGGATCCCA | + |
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Preference number: 6 (lower is better) Translates to: ICSTLGFSKLSC*WSRIKPSGWIP Trigger: TGGGATCCAGCCAGATGGCTTTATTCTGGACCATCAACATGATAATTTGGAAAATCCTAAAGTGGAACATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021639.8 |
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