Pregenerated sensors for TUBA8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030137Ensembl transcript IDs: ENSMUST00000032233.9
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGTTCCCTGTATGTTCAGTGTCCTTGTGTCTGGTCACAATGCCTaGGTGCTGGAGTCAGGGGCCCGTCTATGTAGGACAGGAAGTAGG | + |
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Preference number: 1 (lower is better) Translates to: GVPCMFSVLVSGHNA*VLESGARLCRTGSR Trigger: CCTACTTCCTGTCCTACATAGACGGGCCCCTGACTCCAGCACCCAGGCATTGTGACCAGACACAAGGACACTGAACATACAGGGAACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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| 3UTR TCA 90 bp | TGGAGTCAGGGGCCCGTCTATGTAGGACAGGAAGTAGGCTGGGACTaGGAGGCCTGCCTGTCACTTTCTCTTTCTGTGGTTTCCTTTTCC | + |
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Preference number: 1 (lower is better) Translates to: WSQGPVYVGQEVGWD*EACLSLSLSVVSFS Trigger: GGAAAAGGAAACCACAGAAAGAGAAAGTGACAGGCAGGCCTCTCAGTCCCAGCCTACTTCCTGTCCTACATAGACGGGCCCCTGACTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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| 3UTR CCA 90 bp | CACAAGCGTCTGTCCATCCCATCTCTCTGCAGCATCTTCCCAGACTaGGTTTTTGCTGGTGTGGTCCTATTCTTCCAACAGCAGGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: HKRLSIPSLCSIFPD*VFAGVVLFFQQQAL Trigger: CAGAGCCTGCTGTTGGAAGAATAGGACCACACCAGCAAAAACCCAGTCTGGGAAGATGCTGCAGAGAGATGGGATGGACAGACGCTTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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| 3UTR GCA 90 bp | TCTGTCCATCCCATCTCTCTGCAGCATCTTCCCAGACTGGGTTTTTaGTGGTGTGGTCCTATTCTTCCAACAGCAGGCTCTGTCTTAGGG | + |
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Preference number: 1 (lower is better) Translates to: SVHPISLQHLPRLGF*WCGPILPTAGSVLG Trigger: CCCTAAGACAGAGCCTGCTGTTGGAAGAATAGGACCACACCAGCAAAAACCCAGTCTGGGAAGATGCTGCAGAGAGATGGGATGGACAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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| 3UTR TCA 90 bp | GAGAGGGAAAGGGATAGAGATACTCAAACTCTTGATGAACGAATGTaGTCGATCCAGACGAGGTCAGGGCTGTGCTGTGGATCCATCACA | + |
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Preference number: 1 (lower is better) Translates to: ERERDRDTQTLDERM*SIQTRSGLCCGSIT Trigger: TGTGATGGATCCACAGCACAGCCCTGACCTCGTCTGGATCGATCACATTCGTTCATCAAGAGTTTGAGTATCTCTATCCCTTTCCCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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| 3UTR-3UTR TCA 90 bp | AGGACAGGAAGTAGGCTGGGACTGAGAGGCCTGCCTGTCACTTTCTCTTTCTGTTTCCCCACAGAAGAGTaGGCCCAGCATCCTAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: RTGSRLGLRGLPVTFSFCFPTEE*AQHPKR Trigger: CCTCTTAGGATGCTGGGCTCACTCTTCTGTGGGGAA...ACAGAAAGAGAAAGTGACAGGCAGGCCTCTCAGTCCCAGCCTACTTCCTGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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| 3UTR-3UTR CCA 90 bp | ATCACACAAGCGTCTGTCCATCCCATCTCTCTGCAGCATCTTCCCAGACTGGGTATGTGCATCTGCAGCTaGGTGTCTGAACGCAGCACT | + |
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Preference number: 2 (lower is better) Translates to: ITQASVHPISLQHLPRLGMCICS*VSERST Trigger: AGTGCTGCGTTCAGACACCCAGCTGCAGATGCACAT...ACCCAGTCTGGGAAGATGCTGCAGAGAGATGGGATGGACAGACGCTTGTGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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| 3UTR CAA 90 bp | GTCTGTCCATCCCATCTCTCTGCAGCATCTTCCCAGACTGGGTTTTaGCTGGTGTGGTCCTATTCTTCCAACAGCAGGCTCTGTCTTAGG | + |
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Preference number: 2 (lower is better) Translates to: VCPSHLSAASSQTGF*LVWSYSSNSRLCLR Trigger: CCTAAGACAGAGCCTGCTGTTGGAAGAATAGGACCACACCAGCAAAAACCCAGTCTGGGAAGATGCTGCAGAGAGATGGGATGGACAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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| 3UTR CAA 90 bp | CTTGGAACACACCCGAGAGGGAAAGGGATAGAGATACTCAAACTCTaGATGAACGAATGTGATCGATCCAGACGAGGTCAGGGCTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: LGTHPRGKGIEILKL*MNECDRSRRGQGCA Trigger: AGCACAGCCCTGACCTCGTCTGGATCGATCACATTCGTTCATCAAGAGTTTGAGTATCTCTATCCCTTTCCCTCTCGGGTGTGTTCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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| 3UTR-3UTR CCA 90 bp | ATCACACAAGCGTCTGTCCATCCCATCTCTCTGCAGCATCTTCCCAGACTGGGTCCAGCATGCTGTGAGTaGAACCAACACAAAGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: ITQASVHPISLQHLPRLGPACCE*NQHKER Trigger: TCTTTCTTTGTGTTGGTTCCACTCACAGCATGCTGG...ACCCAGTCTGGGAAGATGCTGCAGAGAGATGGGATGGACAGACGCTTGTGTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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| 3UTR CCA 72 bp | AGAGGGAGTTCCCTGTATGTTCAGTGTCCTTGTGTCTaGTCACAATGCCTGGGTGCTGGAGTCAGGGGCCCG | + |
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Preference number: 3 (lower is better) Translates to: RGSSLYVQCPCV*SQCLGAGVRGP Trigger: CGGGCCCCTGACTCCAGCACCCAGGCATTGTGACCAGACACAAGGACACTGAACATACAGGGAACTCCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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| 3UTR TCA 72 bp | GGGCCCGTCTATGTAGGACAGGAAGTAGGCTGGGACTaGGAGGCCTGCCTGTCACTTTCTCTTTCTGTGGTT | + |
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Preference number: 3 (lower is better) Translates to: GPVYVGQEVGWD*EACLSLSLSVV Trigger: AACCACAGAAAGAGAAAGTGACAGGCAGGCCTCTCAGTCCCAGCCTACTTCCTGTCCTACATAGACGGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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| 3UTR CCA 72 bp | GAGGAGAAAACAGGAGAGACCATGTGCATCTGCAGCTaGGTGTCTGAACGCAGCACTAGGAACCCAGCATGC | + |
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Preference number: 3 (lower is better) Translates to: EEKTGETMCICS*VSERSTRNPAC Trigger: GCATGCTGGGTTCCTAGTGCTGCGTTCAGACACCCAGCTGCAGATGCACATGGTCTCTCCTGTTTTCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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| 3UTR CCA 72 bp | TGTATGTTCAGTGTCCTTGTGTCTGGTCACAATGCCTaGGTGCTGGAGTCAGGGGCCCGTCTATGTAGGACA | + |
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Preference number: 3 (lower is better) Translates to: CMFSVLVSGHNA*VLESGARLCRT Trigger: TGTCCTACATAGACGGGCCCCTGACTCCAGCACCCAGGCATTGTGACCAGACACAAGGACACTGAACATACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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| 3UTR CCA 72 bp | TCTGAACGCAGCACTAGGAACCCAGCATGCTGTGAGTaGAACCAACACAAAGAAAGAGGCATAGTCATGGGG | + |
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Preference number: 3 (lower is better) Translates to: SERSTRNPACCE*NQHKERGIVMG Trigger: CCCCATGACTATGCCTCTTTCTTTGTGTTGGTTCCACTCACAGCATGCTGGGTTCCTAGTGCTGCGTTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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| 3UTR CCA 72 bp | TCTGCAGCATCTTCCCAGACTGGGTTTTTGCTGGTGTaGTCCTATTCTTCCAACAGCAGGCTCTGTCTTAGG | + |
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Preference number: 3 (lower is better) Translates to: SAASSQTGFLLV*SYSSNSRLCLR Trigger: CCTAAGACAGAGCCTGCTGTTGGAAGAATAGGACCACACCAGCAAAAACCCAGTCTGGGAAGATGCTGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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| 3UTR CCA 72 bp | CTGTCCATCCCATCTCTCTGCAGCATCTTCCCAGACTaGGTTTTTGCTGGTGTGGTCCTATTCTTCCAACAG | + |
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Preference number: 3 (lower is better) Translates to: LSIPSLCSIFPD*VFAGVVLFFQQ Trigger: CTGTTGGAAGAATAGGACCACACCAGCAAAAACCCAGTCTGGGAAGATGCTGCAGAGAGATGGGATGGACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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| CDS-3UTR GCA 90 bp | ATGCCTGGGTGCTGGAGTCAGGGGCCCGTCTATGTAGGACAGGAAGTAGGCTGGCCAGCTTGGACTTCTTaGCATAGTCTAGGGAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: MPGCWSQGPVYVGQEVGWPAWTS*HSLGKG Trigger: GCCTTTCCCTAGACTATGGCAAGAAGTCCAAGCTGG...CCAGCCTACTTCCTGTCCTACATAGACGGGCCCCTGACTCCAGCACCCAGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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| CDS-3UTR CCA 90 bp | GAGGAGAAAACAGGAGAGACCATGTGCATCTGCAGCTGGGTGTCTGAACGCAGCTCACACTTCACCATCTaGCTGTTGGGCTCGAAACAG | + |
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Preference number: 4 (lower is better) Translates to: EEKTGETMCICSWVSERSSHFTI*LLGSKQ Trigger: CTGTTTCGAGCCCAACAGCCAGATGGTGAAGTGTGA...GCTGCGTTCAGACACCCAGCTGCAGATGCACATGGTCTCTCCTGTTTTCTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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| CDS-3UTR GCA 90 bp | AGCACTAGGAACCCAGCATGCTGTGAGTGGAACCAACACAAAGAAAGAGGCATAAAGATGAGGAAGCCCTaGAAGCCGGAGCAGGCATCA | + |
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Preference number: 4 (lower is better) Translates to: STRNPACCEWNQHKERGIKMRKP*KPEQAS Trigger: TGATGCCTGCTCCGGCTTGCAGGGCTTCCTCATCTT...TATGCCTCTTTCTTTGTGTTGGTTCCACTCACAGCATGCTGGGTTCCTAGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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| CDS-3UTR GCA 90 bp | TTGCTGGTGTGGTCCTATTCTTCCAACAGCAGGCTCTGTCTTAGGGCAACTCAGGGCGTAATTGTTAGCTaGATCCTCCTTGCCTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: LLVWSYSSNSRLCLRATQGVIVS*ILLACD Trigger: ATCACAGGCAAGGAGGATGCAGCTAACAATTACGCC...CTGAGTTGCCCTAAGACAGAGCCTGCTGTTGGAAGAATAGGACCACACCAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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| CDS-3UTR CCA 90 bp | TGTCTTAGGGCAACTCAGTCTAAACTAGAATTAAGTTTCTTAACCCCATGTTCGCGGCTCGCTGGACTTTaGCCAGGTCCCCTCCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: CLRATQSKLELSFLTPCSRLAGL*PGPLLA Trigger: TGCCAGGAGGGGACCTGGCCAAAGTCCAGCGAGCCG...CGAACATGGGGTTAAGAAACTTAATTCTAGTTTAGACTGAGTTGCCCTAAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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| 3UTR CAA 72 bp | CACCCGAGAGGGAAAGGGATAGAGATACTCAAACTCTaGATGAACGAATGTGATCGATCCAGACGAGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: HPRGKGIEILKL*MNECDRSRRGQ Trigger: CTGACCTCGTCTGGATCGATCACATTCGTTCATCAAGAGTTTGAGTATCTCTATCCCTTTCCCTCTCGGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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| CDS-3UTR GCA 90 bp | TGTCTTAGGGCAACTCAGTCTAAACTAGAATTAAGTTTCTTAACCCCATGTTCGCTGGCGGTAGGTTCCTaGCCGCACCTCATCTACTAC | + |
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Preference number: 4 (lower is better) Translates to: CLRATQSKLELSFLTPCSLAVGS*PHLIYY Trigger: GTAGTAGATGAGGTGCGGGCAGGAACCTACCGCCAG...CGAACATGGGGTTAAGAAACTTAATTCTAGTTTAGACTGAGTTGCCCTAAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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| CDS-3UTR TCA 90 bp | TTTCTTAACCCCATGTTCGTGACCTGTTCACTTTCATCCTTCAGTAATGAAATACACCAGTCAACAAACTaGATAGTTCTCTTGGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: FLNPMFVTCSLSSFSNEIHQSTN*IVLLVL Trigger: CAAGACCAAGAGAACTATTCAGTTTGTTGACTGGTG...TATTTCATTACTGAAGGATGAAAGTGAACAGGTCACGAACATGGGGTTAAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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| CDS-3UTR CAA 90 bp | GAGGAGAAAACAGGAGAGACCATGTGCATCTGCAGCTGGGTGTCTGAACGCAGCACGGCTCGCTGGACTTaGGCCAGGTCCCCTCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: EEKTGETMCICSWVSERSTARWT*ARSPPG Trigger: GCCAGGAGGGGACCTGGCCAAAGTCCAGCGAGCCGT...GCTGCGTTCAGACACCCAGCTGCAGATGCACATGGTCTCTCCTGTTTTCTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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| CDS-3UTR CAA 90 bp | GAGGAGAAAACAGGAGAGACCATGTGCATCTGCAGCTGGGTGTCTGAACGCAGCGCGACATTCACGTCCTaGGGTACCACATCACCGCGG | + |
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Preference number: 5 (lower is better) Translates to: EEKTGETMCICSWVSERSATFTS*GTTSPR Trigger: CCGCGGTGATGTGGTACCCAAGGACGTGAATGTCGC...GCTGCGTTCAGACACCCAGCTGCAGATGCACATGGTCTCTCCTGTTTTCTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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| CDS TCA 90 bp | CTGAAGAAGGTGGTAAAGGAGTCGTCATCGTTGATCTTGCTGGCCTaGGTGCCAAAGGTTCCATCCGCCTGGATGCCGTGCTCCAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: LKKVVKESSSLILLA*VPKVPSAWMPCSKQ Trigger: CTGCTTGGAGCACGGCATCCAGGCGGATGGAACCTTTGGCACTCAGGCCAGCAAGATCAACGATGACGACTCCTTTACCACCTTCTTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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| CDS-3UTR CAA 90 bp | TGTGGTCCTATTCTTCCAACAGCAGGCTCTGTCTTAGGGCAACTCAGTCTAAACTTCACCATCTGGCTGTaGGGCTCGAAACAGGAGCTA | + |
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Preference number: 5 (lower is better) Translates to: CGPILPTAGSVLGQLSLNFTIWL*GSKQEL Trigger: TAGCTCCTGTTTCGAGCCCAACAGCCAGATGGTGAA...GTTTAGACTGAGTTGCCCTAAGACAGAGCCTGCTGTTGGAAGAATAGGACCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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| CDS-3UTR CAA 90 bp | AGCACTAGGAACCCAGCATGCTGTGAGTGGAACCAACACAAAGAAAGAGGCATAAATCTGAACTCCGGCTaGACCCACATGGACCGATAT | + |
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Preference number: 5 (lower is better) Translates to: STRNPACCEWNQHKERGINLNSG*THMDRY Trigger: ATATCGGTCCATGTGGGTCAAGCCGGAGTTCAGATT...TATGCCTCTTTCTTTGTGTTGGTTCCACTCACAGCATGCTGGGTTCCTAGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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| CDS TCA 72 bp | GTGGTAAAGGAGTCGTCATCGTTGATCTTGCTGGCCTaGGTGCCAAAGGTTCCATCCGCCTGGATGCCGTGC | + |
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Preference number: 6 (lower is better) Translates to: VVKESSSLILLA*VPKVPSAWMPC Trigger: GCACGGCATCCAGGCGGATGGAACCTTTGGCACTCAGGCCAGCAAGATCAACGATGACGACTCCTTTACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032233.9 |
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