Pregenerated sensors for TUBA4A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026202Ensembl transcript IDs: ENSMUST00000079464.13, ENSMUST00000186213.7
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTGCCCTTGTTCCTGCCCATCCCCCAAGTTTGTGAGGTGGCTGTATaGCCGGGAACTTTGGGCCCGCCCAGCCCCCATTCCCAAATCCTC | + |
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Preference number: 1 (lower is better) Translates to: LPLFLPIPQVCEVAV*PGTLGPPSPHSQIL Trigger: GAGGATTTGGGAATGGGGGCTGGGCGGGCCCAAAGTTCCCGGGCATACAGCCACCTCACAAACTTGGGGGATGGGCAGGAACAAGGGCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079464.13 ENSMUST00000186213.7 |
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| 3UTR CCA 90 bp | CAACTAGATTGCCCTTGTTCCTGCCCATCCCCCAAGTTTGTGAGGTaGCTGTATGCCCGGGAACTTTGGGCCCGCCCAGCCCCCATTCCC | + |
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Preference number: 1 (lower is better) Translates to: QLDCPCSCPSPKFVR*LYARELWARPAPIP Trigger: GGGAATGGGGGCTGGGCGGGCCCAAAGTTCCCGGGCATACAGCCACCTCACAAACTTGGGGGATGGGCAGGAACAAGGGCAATCTAGTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079464.13 ENSMUST00000186213.7 |
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| 3UTR GCA 90 bp | CTGCCAGAGGTGCTGTGGCACAAACAACTAGATTGCCCTTGTTCCTaGCCATCCCCCAAGTTTGTGAGGTGGCTGTATGCCCGGGAACTT | + |
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Preference number: 1 (lower is better) Translates to: LPEVLWHKQLDCPCS*PSPKFVRWLYAREL Trigger: AAGTTCCCGGGCATACAGCCACCTCACAAACTTGGGGGATGGGCAGGAACAAGGGCAATCTAGTTGTTTGTGCCACAGCACCTCTGGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079464.13 ENSMUST00000186213.7 |
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| 3UTR GCA 90 bp | AATAGCATGGCTCCAGCCCCAGAAAGCAAGATAGACAGCAAGCTATaGAAAGCTGCCAGAGGTGCTGTGGCACAAACAACTAGATTGCCC | + |
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Preference number: 1 (lower is better) Translates to: NSMAPAPESKIDSKL*KAARGAVAQTTRLP Trigger: GGGCAATCTAGTTGTTTGTGCCACAGCACCTCTGGCAGCTTTGCATAGCTTGCTGTCTATCTTGCTTTCTGGGGCTGGAGCCATGCTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079464.13 ENSMUST00000186213.7 |
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| 3UTR CCA 90 bp | CCAGAGAGCTTCAAGCTTGAGCTGGTTTCTGTCTGTGCCAAGAAGTaGGACCAGGGTCTCCTTGAAAGCACACTCAACCAGTTCTGTCAT | + |
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Preference number: 1 (lower is better) Translates to: PESFKLELVSVCAKK*DQGLLESTLNQFCH Trigger: ATGACAGAACTGGTTGAGTGTGCTTTCAAGGAGACCCTGGTCCCACTTCTTGGCACAGACAGAAACCAGCTCAAGCTTGAAGCTCTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186213.7 |
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| 3UTR TCA 90 bp | GTGCTCCTGTTCTGGAGATTCCACCCCTACATGCTGACGTCAACATaGGTCCTAGGGTGCCTATTAGTGAAGTATAATTTATCCCTAGGG | + |
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Preference number: 1 (lower is better) Translates to: VLLFWRFHPYMLTST*VLGCLLVKYNLSLG Trigger: CCCTAGGGATAAATTATACTTCACTAATAGGCACCCTAGGACTCATGTTGACGTCAGCATGTAGGGGTGGAATCTCCAGAACAGGAGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186213.7 |
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| 3UTR TCA 90 bp | CTGCTTGCTATTTCCAAGGGAAGCTCCTGGCAAGAAGTACTGGTATaGTGTCTTGAGGTAGATCTACTTCTTGAGTTCTGGCAGCAGGCA | + |
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Preference number: 1 (lower is better) Translates to: LLAISKGSSWQEVLV*CLEVDLLLEFWQQA Trigger: TGCCTGCTGCCAGAACTCAAGAAGTAGATCTACCTCAAGACATCATACCAGTACTTCTTGCCAGGAGCTTCCCTTGGAAATAGCAAGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186213.7 |
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| 3UTR CCA 90 bp | CTTTTAAGCTGGCTTAGTCAAAACCAGAGAGCTTCAAGCTTGAGCTaGTTTCTGTCTGTGCCAAGAAGTGGGACCAGGGTCTCCTTGAAA | + |
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Preference number: 1 (lower is better) Translates to: LLSWLSQNQRASSLS*FLSVPRSGTRVSLK Trigger: TTTCAAGGAGACCCTGGTCCCACTTCTTGGCACAGACAGAAACCAGCTCAAGCTTGAAGCTCTCTGGTTTTGACTAAGCCAGCTTAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186213.7 |
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| 3UTR TCA 90 bp | TCAGTGTTCAATGACGCCTGGGCCAAGCCTTCTAGAGCTGTTGAGTaGAGCAGCAGCAAGAAGAATAAAGTAGTCCAATCATCCAACACA | + |
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Preference number: 1 (lower is better) Translates to: SVFNDAWAKPSRAVE*SSSKKNKVVQSSNT Trigger: TGTGTTGGATGATTGGACTACTTTATTCTTCTTGCTGCTGCTTCACTCAACAGCTCTAGAAGGCTTGGCCCAGGCGTCATTGAACACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079464.13 ENSMUST00000186213.7 |
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| 3UTR CCA 90 bp | GTAGATCTACTTCTTGAGTTCTGGCAGCAGGCAGGTCTTTTAAGCTaGCTTAGTCAAAACCAGAGAGCTTCAAGCTTGAGCTGGTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: VDLLLEFWQQAGLLS*LSQNQRASSLSWFL Trigger: CAGAAACCAGCTCAAGCTTGAAGCTCTCTGGTTTTGACTAAGCCAGCTTAAAAGACCTGCCTGCTGCCAGAACTCAAGAAGTAGATCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186213.7 |
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| 3UTR-3UTR CCA 90 bp | GTGAGGTGGCTGTATGCCCGGGAACTTTGGGCCCGCCCAGCCCCCATTCCCAAATTCTGGGGCTCAATATaGGGCCCCCTTGGCAAGTCT | + |
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Preference number: 2 (lower is better) Translates to: VRWLYARELWARPAPIPKFWGSI*GPLGKS Trigger: AGACTTGCCAAGGGGGCCCCATATTGAGCCCCAGAA...TTTGGGAATGGGGGCTGGGCGGGCCCAAAGTTCCCGGGCATACAGCCACCTCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000079464.13 ENSMUST00000186213.7 |
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| 3UTR-3UTR CCA 90 bp | CAAGTTTGTGAGGTGGCTGTATGCCCGGGAACTTTGGGCCCGCCCAGCCCCCATAATATGGGGCCCCCTTaGCAAGTCTCACTGTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: QVCEVAVCPGTLGPPSPHNMGPP*QVSLSA Trigger: GGCTGACAGTGAGACTTGCCAAGGGGGCCCCATATT...ATGGGGGCTGGGCGGGCCCAAAGTTCCCGGGCATACAGCCACCTCACAAACTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000079464.13 ENSMUST00000186213.7 |
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| 3UTR-3UTR CCA 90 bp | GTGAGGTGGCTGTATGCCCGGGAACTTTGGGCCCGCCCAGCCCCCATTCCCAAAGTGTTCAATGACGCCTaGGCCAAGCCTTCTAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: VRWLYARELWARPAPIPKVFNDA*AKPSRA Trigger: AGCTCTAGAAGGCTTGGCCCAGGCGTCATTGAACAC...TTTGGGAATGGGGGCTGGGCGGGCCCAAAGTTCCCGGGCATACAGCCACCTCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079464.13 ENSMUST00000186213.7 |
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| 3UTR-3UTR GCA 90 bp | AGGGAGGGGAGACAAGGGCAGGGATGGTGCTCCTGTTCTGGAGATTCCACCCCTCAAGCTATGCAAAGCTaGCAGAGGTGCTGTGGCACA | + |
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Preference number: 2 (lower is better) Translates to: REGRQGQGWCSCSGDSTPQAMQS*QRCCGT Trigger: TGTGCCACAGCACCTCTGGCAGCTTTGCATAGCTTG...AGGGGTGGAATCTCCAGAACAGGAGCACCATCCCTGCCCTTGTCTCCCCTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186213.7 |
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| 3UTR-3UTR CCA 90 bp | GCCAGAGGTGCTGTGGCACAAACAACTAGATTGCCCTTGTTCCTGCCCATCCCCAATATGGGGCCCCCTTaGCAAGTCTCACTGTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: ARGAVAQTTRLPLFLPIPNMGPP*QVSLSA Trigger: GGCTGACAGTGAGACTTGCCAAGGGGGCCCCATATT...GGGGATGGGCAGGAACAAGGGCAATCTAGTTGTTTGTGCCACAGCACCTCTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079464.13 ENSMUST00000186213.7 |
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| 3UTR CAA 90 bp | TGCAAAGCTGCCAGAGGTGCTGTGGCACAAACAACTAGATTGCCCTaGTTCCTGCCCATCCCCCAAGTTTGTGAGGTGGCTGTATGCCCG | + |
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Preference number: 2 (lower is better) Translates to: CKAARGAVAQTTRLP*FLPIPQVCEVAVCP Trigger: CGGGCATACAGCCACCTCACAAACTTGGGGGATGGGCAGGAACAAGGGCAATCTAGTTGTTTGTGCCACAGCACCTCTGGCAGCTTTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079464.13 ENSMUST00000186213.7 |
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| 3UTR-3UTR GCA 90 bp | CAAGTTTGTGAGGTGGCTGTATGCCCGGGAACTTTGGGCCCGCCCAGCCCCCATGGGGACAAGAAACCATaGAAGGAGACTGTTTATTTC | + |
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Preference number: 2 (lower is better) Translates to: QVCEVAVCPGTLGPPSPHGDKKP*KETVYF Trigger: GAAATAAACAGTCTCCTTGCATGGTTTCTTGTCCCC...ATGGGGGCTGGGCGGGCCCAAAGTTCCCGGGCATACAGCCACCTCACAAACTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079464.13 ENSMUST00000186213.7 |
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| 3UTR-3UTR CCA 90 bp | GGTCTTTTCCCTTCTTCAGCAGAGGACAAAGGGAGTGGAGCTGGCAGCCATTTTTTCTGGGGCTCAATATaGGGCCCCCTTGGCAAGTCT | + |
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Preference number: 2 (lower is better) Translates to: GLFPSSAEDKGSGAGSHFFWGSI*GPLGKS Trigger: AGACTTGCCAAGGGGGCCCCATATTGAGCCCCAGAA...AAAATGGCTGCCAGCTCCACTCCCTTTGTCCTCTGCTGAAGAAGGGAAAAGACC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000186213.7 |
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| 3UTR-3UTR CCA 90 bp | AGCTGGCTTAGTCAAAACCAGAGAGCTTCAAGCTTGAGCTGGTTTCTGTCTGTGAGTCCATGTGACCTCTaGGTGGAAGCACACCGGGTC | + |
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Preference number: 2 (lower is better) Translates to: SWLSQNQRASSLSWFLSVSPCDL*VEAHRV Trigger: GACCCGGTGTGCTTCCACCCAGAGGTCACATGGACT...CACAGACAGAAACCAGCTCAAGCTTGAAGCTCTCTGGTTTTGACTAAGCCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186213.7 |
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| 3UTR-3UTR TCA 90 bp | CCAAGAAGTGGGACCAGGGTCTCCTTGAAAGCACACTCAACCAGTTCTGTCATTACCCCGAGCAGAGGCTaGAGCCAAAAGAAAGCACAA | + |
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Preference number: 2 (lower is better) Translates to: PRSGTRVSLKAHSTSSVITPSRG*SQKKAQ Trigger: TTGTGCTTTCTTTTGGCTTCAGCCTCTGCTCGGGGT...AATGACAGAACTGGTTGAGTGTGCTTTCAAGGAGACCCTGGTCCCACTTCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186213.7 |
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| 3UTR-3UTR CCA 90 bp | GCACCTGCCTTAGTTGGGTTTCAAACTTTCCTCAGGGAAGGGCACTGCTTCCCTGACAGGTCCAGGGTTTaGTCCTTGTTTCTTTCCTAT | + |
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Preference number: 2 (lower is better) Translates to: APALVGFQTFLREGHCFPDRSRV*SLFLSY Trigger: ATAGGAAAGAAACAAGGACCAAACCCTGGACCTGTC...AGGGAAGCAGTGCCCTTCCCTGAGGAAAGTTTGAAACCCAACTAAGGCAGGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186213.7 |
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| 3UTR-3UTR GCA 90 bp | CCAAGAAGTGGGACCAGGGTCTCCTTGAAAGCACACTCAACCAGTTCTGTCATTATAGACAGCAAGCTATaGAAAGCTGCCAGAGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: PRSGTRVSLKAHSTSSVIIDSKL*KAARGA Trigger: AGCACCTCTGGCAGCTTTGCATAGCTTGCTGTCTAT...AATGACAGAACTGGTTGAGTGTGCTTTCAAGGAGACCCTGGTCCCACTTCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186213.7 |
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| 3UTR-3UTR TCA 90 bp | AGCTGGCTTAGTCAAAACCAGAGAGCTTCAAGCTTGAGCTGGTTTCTGTCTGTGATGCTGACGTCAACATaGGTCCTAGGGTGCCTATTA | + |
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Preference number: 2 (lower is better) Translates to: SWLSQNQRASSLSWFLSVMLTST*VLGCLL Trigger: TAATAGGCACCCTAGGACTCATGTTGACGTCAGCAT...CACAGACAGAAACCAGCTCAAGCTTGAAGCTCTCTGGTTTTGACTAAGCCAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186213.7 |
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| 3UTR-3UTR TCA 90 bp | AGCTGGCTTAGTCAAAACCAGAGAGCTTCAAGCTTGAGCTGGTTTCTGTCTGTGTCTAGAGCTGTTGAGTaGAGCAGCAGCAAGAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: SWLSQNQRASSLSWFLSVSRAVE*SSSKKN Trigger: ATTCTTCTTGCTGCTGCTTCACTCAACAGCTCTAGA...CACAGACAGAAACCAGCTCAAGCTTGAAGCTCTCTGGTTTTGACTAAGCCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186213.7 |
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| 3UTR GCA 72 bp | TTCCTGCCCATCCCCCAAGTTTGTGAGGTGGCTGTATaGCCGGGAACTTTGGGCCCGCCCAGCCCCCATTCC | + |
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Preference number: 3 (lower is better) Translates to: FLPIPQVCEVAV*PGTLGPPSPHS Trigger: GGAATGGGGGCTGGGCGGGCCCAAAGTTCCCGGGCATACAGCCACCTCACAAACTTGGGGGATGGGCAGGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079464.13 ENSMUST00000186213.7 |
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| 3UTR CCA 72 bp | TGCCCTTGTTCCTGCCCATCCCCCAAGTTTGTGAGGTaGCTGTATGCCCGGGAACTTTGGGCCCGCCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: CPCSCPSPKFVR*LYARELWARPA Trigger: GGCTGGGCGGGCCCAAAGTTCCCGGGCATACAGCCACCTCACAAACTTGGGGGATGGGCAGGAACAAGGGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079464.13 ENSMUST00000186213.7 |
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| 3UTR CCA 72 bp | CCCAAGTTTGTGAGGTGGCTGTATGCCCGGGAACTTTaGGCCCGCCCAGCCCCCATTCCCAAATCCTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: PKFVRWLYAREL*ARPAPIPKSSV Trigger: CACTGAGGATTTGGGAATGGGGGCTGGGCGGGCCCAAAGTTCCCGGGCATACAGCCACCTCACAAACTTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079464.13 ENSMUST00000186213.7 |
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| 3UTR-3UTR CAA 90 bp | CCCATCCCCCAAGTTTGTGAGGTGGCTGTATGCCCGGGAACTTTGGGCCCGCCCCTTACATTGAAGTCCTaGGGTTCCTGCTTTCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: PIPQVCEVAVCPGTLGPPLTLKS*GSCFLG Trigger: CCCCAGAAAGCAGGAACCCAAGGACTTCAATGTAAG...GGGCGGGCCCAAAGTTCCCGGGCATACAGCCACCTCACAAACTTGGGGGATGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079464.13 ENSMUST00000186213.7 |
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| 3UTR-3UTR CAA 90 bp | GGTGGCTGTATGCCCGGGAACTTTGGGCCCGCCCAGCCCCCATTCCCAAATCCTTCCAGGGTTTGGTCCTaGTTTCTTTCCTATTCTGCG | + |
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Preference number: 3 (lower is better) Translates to: GGCMPGNFGPAQPPFPNPSRVWS*FLSYSA Trigger: CGCAGAATAGGAAAGAAACAAGGACCAAACCCTGGA...AGGATTTGGGAATGGGGGCTGGGCGGGCCCAAAGTTCCCGGGCATACAGCCACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079464.13 ENSMUST00000186213.7 |
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| 3UTR-3UTR CAA 90 bp | CTTTGGGCCCGCCCAGCCCCCATTCCCAAATCCTCAGTGTTCAATGACGCCTGGCTTACATTGAAGTCCTaGGGTTCCTGCTTTCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: LWARPAPIPKSSVFNDAWLTLKS*GSCFLG Trigger: CCCCAGAAAGCAGGAACCCAAGGACTTCAATGTAAG...CCAGGCGTCATTGAACACTGAGGATTTGGGAATGGGGGCTGGGCGGGCCCAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079464.13 ENSMUST00000186213.7 |
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| 3UTR GCA 72 bp | GTGCTGTGGCACAAACAACTAGATTGCCCTTGTTCCTaGCCATCCCCCAAGTTTGTGAGGTGGCTGTATGCC | + |
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Preference number: 3 (lower is better) Translates to: VLWHKQLDCPCS*PSPKFVRWLYA Trigger: GGCATACAGCCACCTCACAAACTTGGGGGATGGGCAGGAACAAGGGCAATCTAGTTGTTTGTGCCACAGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079464.13 ENSMUST00000186213.7 |
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| 3UTR-3UTR CAA 90 bp | GTGAGGTGGCTGTATGCCCGGGAACTTTGGGCCCGCCCAGCCCCCATTCCCAAATCAGAAAGTGAAGACTaGTATCTTGCAATAGCTTGT | + |
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Preference number: 3 (lower is better) Translates to: VRWLYARELWARPAPIPKSESED*YLAIAC Trigger: ACAAGCTATTGCAAGATACAAGTCTTCACTTTCTGA...TTTGGGAATGGGGGCTGGGCGGGCCCAAAGTTCCCGGGCATACAGCCACCTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079464.13 ENSMUST00000186213.7 |
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| 3UTR-3UTR CAA 90 bp | AGCCCCAGAAAGCAAGATAGACAGCAAGCTATGCAAAGCTGCCAGAGGTGCTGTAGCCTTCTAGAGCTGTaGAGTGAAGCAGCAGCAAGA | + |
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Preference number: 3 (lower is better) Translates to: SPRKQDRQQAMQSCQRCCSLLEL*SEAAAR Trigger: TCTTGCTGCTGCTTCACTCAACAGCTCTAGAAGGCT...ACAGCACCTCTGGCAGCTTTGCATAGCTTGCTGTCTATCTTGCTTTCTGGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079464.13 ENSMUST00000186213.7 |
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| 3UTR CCA 72 bp | TTCAAGCTTGAGCTGGTTTCTGTCTGTGCCAAGAAGTaGGACCAGGGTCTCCTTGAAAGCACACTCAACCAG | + |
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Preference number: 3 (lower is better) Translates to: FKLELVSVCAKK*DQGLLESTLNQ Trigger: CTGGTTGAGTGTGCTTTCAAGGAGACCCTGGTCCCACTTCTTGGCACAGACAGAAACCAGCTCAAGCTTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186213.7 |
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| 3UTR CCA 72 bp | TGGCTTAGTCAAAACCAGAGAGCTTCAAGCTTGAGCTaGTTTCTGTCTGTGCCAAGAAGTGGGACCAGGGTC | + |
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Preference number: 3 (lower is better) Translates to: WLSQNQRASSLS*FLSVPRSGTRV Trigger: GACCCTGGTCCCACTTCTTGGCACAGACAGAAACCAGCTCAAGCTTGAAGCTCTCTGGTTTTGACTAAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186213.7 |
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| 3UTR GCA 72 bp | CAGGTCCAGGGTTTGGTCCTTGTTTCTTTCCTATTCTaGGAGTCCTTAGGACCTTACATTGAAGTCCTTGGG | + |
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Preference number: 3 (lower is better) Translates to: QVQGLVLVSFLF*ESLGPYIEVLG Trigger: CCCAAGGACTTCAATGTAAGGTCCTAAGGACTCGCAGAATAGGAAAGAAACAAGGACCAAACCCTGGACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079464.13 ENSMUST00000186213.7 |
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| 3UTR TCA 72 bp | ATTTCCAAGGGAAGCTCCTGGCAAGAAGTACTGGTATaGTGTCTTGAGGTAGATCTACTTCTTGAGTTCTGG | + |
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Preference number: 3 (lower is better) Translates to: ISKGSSWQEVLV*CLEVDLLLEFW Trigger: CCAGAACTCAAGAAGTAGATCTACCTCAAGACATCATACCAGTACTTCTTGCCAGGAGCTTCCCTTGGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186213.7 |
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| 3UTR TCA 72 bp | TTCTGGAGATTCCACCCCTACATGCTGACGTCAACATaGGTCCTAGGGTGCCTATTAGTGAAGTATAATTTA | + |
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Preference number: 3 (lower is better) Translates to: FWRFHPYMLTST*VLGCLLVKYNL Trigger: TAAATTATACTTCACTAATAGGCACCCTAGGACTCATGTTGACGTCAGCATGTAGGGGTGGAATCTCCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186213.7 |
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| CDS-3UTR TCA 90 bp | GTGAGGTGGCTGTATGCCCGGGAACTTTGGGCCCGCCCAGCCCCCATTCCCAAACCATCAGCAGAGAGGTaGAGCCAGAGCCGGTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: VRWLYARELWARPAPIPKPSAER*SQSRCP Trigger: GGGGCACCGGCTCTGGCTTCACCTCTCTGCTGATGG...TTTGGGAATGGGGGCTGGGCGGGCCCAAAGTTCCCGGGCATACAGCCACCTCAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079464.13 ENSMUST00000186213.7 |
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| CDS-3UTR TCA 90 bp | CCTCTGGGTGGAAGCACACCGGGTCTTTTCCCTTCTTCAGCAGAGGACAAAGGGCCATCAGCAGAGAGGTaGAGCCAGAGCCGGTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: PLGGSTPGLFPSSAEDKGPSAER*SQSRCP Trigger: GGGGCACCGGCTCTGGCTTCACCTCTCTGCTGATGG...CCCTTTGTCCTCTGCTGAAGAAGGGAAAAGACCCGGTGTGCTTCCACCCAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186213.7 |
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| 3UTR CAA 72 bp | CCCCAAGTTTGTGAGGTGGCTGTATGCCCGGGAACTTaGGGCCCGCCCAGCCCCCATTCCCAAATCCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: PQVCEVAVCPGT*GPPSPHSQILS Trigger: ACTGAGGATTTGGGAATGGGGGCTGGGCGGGCCCAAAGTTCCCGGGCATACAGCCACCTCACAAACTTGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079464.13 ENSMUST00000186213.7 |
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| 3UTR CAA 72 bp | AGGGTGGGTAGCTTAGAACAGCCCAGCTCCGCAGGTTaGCCAAGTCCATGTGACCTCTGGGTGGAAGCACAC | + |
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Preference number: 4 (lower is better) Translates to: RVGSLEQPSSAG*PSPCDLWVEAH Trigger: GTGTGCTTCCACCCAGAGGTCACATGGACTTGGCAAACCTGCGGAGCTGGGCTGTTCTAAGCTACCCACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186213.7 |
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| CDS-3UTR CCA 90 bp | CTTTGGGCCCGCCCAGCCCCCATTCCCAAATCCTCAGTGTTCAATGACGCCTGGCTCTGCAGAAATGACTaGTGCATAGGTAGCCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: LWARPAPIPKSSVFNDAWLCRND*CIGSQG Trigger: CCCTTGGCTACCTATGCACCAGTCATTTCTGCAGAG...CCAGGCGTCATTGAACACTGAGGATTTGGGAATGGGGGCTGGGCGGGCCCAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079464.13 ENSMUST00000186213.7 |
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| CDS-3UTR CCA 90 bp | AGGGAGGGGAGACAAGGGCAGGGATGGTGCTCCTGTTCTGGAGATTCCACCCCTCTCTGCAGAAATGACTaGTGCATAGGTAGCCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: REGRQGQGWCSCSGDSTPLCRND*CIGSQG Trigger: CCCTTGGCTACCTATGCACCAGTCATTTCTGCAGAG...AGGGGTGGAATCTCCAGAACAGGAGCACCATCCCTGCCCTTGTCTCCCCTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186213.7 |
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| CDS-3UTR GCA 90 bp | AGGAGGCTTCCACCCCGAGCAGAGGCTGAAGCCAAAAGAAAGCACAAACAGAGGCAGGTCCACAAAGACTaGCCGAGGCACATGTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: RRLPPRAEAEAKRKHKQRQVHKD*PRHMFS Trigger: GGAAAACATGTGCCTCGGGCAGTCTTTGTGGACCTG...CCTCTGTTTGTGCTTTCTTTTGGCTTCAGCCTCTGCTCGGGGTGGAAGCCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000186213.7 |
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| CDS-3UTR GCA 90 bp | AAGGGGGACAAGCAGAGGCTCAAGCAGTTACAAAGGGGACAAGAAACCATGCAATGCAGAAATGACTGGTaGATAGGTAGCCAAGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: KGDKQRLKQLQRGQETMQCRNDW*IGSQGE Trigger: TTCCCCTTGGCTACCTATGCACCAGTCATTTCTGCA...TTGCATGGTTTCTTGTCCCCTTTGTAACTGCTTGAGCCTCTGCTTGTCCCCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079464.13 ENSMUST00000186213.7 |
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| 3UTR CAA 72 bp | TTTCTGTCTGTGCCAAGAAGTGGGACCAGGGTCTCCTaGAAAGCACACTCAACCAGTTCTGTCATTCATTCC | + |
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Preference number: 4 (lower is better) Translates to: FLSVPRSGTRVS*KAHSTSSVIHS Trigger: GGAATGAATGACAGAACTGGTTGAGTGTGCTTTCAAGGAGACCCTGGTCCCACTTCTTGGCACAGACAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186213.7 |
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| CDS-3UTR GCA 90 bp | AGCCATGTGAAGGTAAAATTAAAAGGTCACAAGCGGCCAATAGCGGGAGGTAGCTGCAGAAATGACTGGTaGATAGGTAGCCAAGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: SHVKVKLKGHKRPIAGGSCRNDW*IGSQGE Trigger: TTCCCCTTGGCTACCTATGCACCAGTCATTTCTGCA...GCTACCTCCCGCTATTGGCCGCTTGTGACCTTTTAATTTTACCTTCACATGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079464.13 ENSMUST00000186213.7 |
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| CDS-3UTR GCA 90 bp | AGACTATCAGATATTTCAGAAAGTGAAGACTTGTATCTTGCAATAGCTTGTAGCAGCGCCAGCTGTCTCTaGCTGTTCTCCGAGCACCCG | + |
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Preference number: 4 (lower is better) Translates to: RLSDISESEDLYLAIACSSASCL*LFSEHP Trigger: CGGGTGCTCGGAGAACAGGCAGAGACAGCTGGCGCT...GCTACAAGCTATTGCAAGATACAAGTCTTCACTTTCTGAAATATCTGATAGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079464.13 |
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| CDS-3UTR CCA 90 bp | GGAGACGACCTGACTTTTAATAGCATGGCTCCAGCCCCAGAAAGCAAGATAGACGTACAAAAGCCCTCTTaGCATACATCAAGTCAAACT | + |
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Preference number: 4 (lower is better) Translates to: GDDLTFNSMAPAPESKIDVQKPS*HTSSQT Trigger: AGTTTGACTTGATGTATGCCAAGAGGGCTTTTGTAC...GTCTATCTTGCTTTCTGGGGCTGGAGCCATGCTATTAAAAGTCAGGTCGTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079464.13 ENSMUST00000186213.7 |
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| CDS-3UTR GCA 90 bp | GTCCAATCATCCAACACAGACTATCAGATATTTCAGAAAGTGAAGACTTGTATCCAGGTCCACAAAGACTaGCCGAGGCACATGTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: VQSSNTDYQIFQKVKTCIQVHKD*PRHMFS Trigger: GGAAAACATGTGCCTCGGGCAGTCTTTGTGGACCTG...GATACAAGTCTTCACTTTCTGAAATATCTGATAGTCTGTGTTGGATGATTGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079464.13 ENSMUST00000186213.7 |
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| CDS-3UTR CAA 90 bp | CCATCCCCCAAGTTTGTGAGGTGGCTGTATGCCCGGGAACTTTGGGCCCGCCCATACATCAAGTCAAACTaGTGGTCCAGACGGGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: PSPKFVRWLYARELWARPYIKSN*WSRRAQ Trigger: CTGGGCCCGTCTGGACCACAAGTTTGACTTGATGTA...TGGGCGGGCCCAAAGTTCCCGGGCATACAGCCACCTCACAAACTTGGGGGATGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079464.13 ENSMUST00000186213.7 |
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