Pregenerated sensors for TUBA1B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000023004

Ensembl transcript IDs: ENSMUST00000077577.8

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR TCA 90 bp	TTGAGACATCATGGAAAACTTAAGAGGTACAACATGGAGAAGACATaGTCACAGAATGGAAACAGCACAGAAGCATCAGTGCCTGCAACT	+
Preference number: 1 (lower is better) Translates to: LRHHGKLKRYNMEKT*SQNGNSTEASVPAT Trigger: AGTTGCAGGCACTGATGCTTCTGTGCTGTTTCCATTCTGTGATCATGTCTTCTCCATGTTGTACCTCTTAAGTTTTCCATGATGTCTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077577.8
3UTR GCA 72 bp	CATGATCACAGAATGGAAACAGCACAGAAGCATCAGTaGCTGCAACTAATACTGGAGCAGTTTGACGACACA	+
Preference number: 3 (lower is better) Translates to: HDHRMETAQKHQ*LQLILEQFDDT Trigger: TGTGTCGTCAAACTGCTCCAGTATTAGTTGCAGGCACTGATGCTTCTGTGCTGTTTCCATTCTGTGATCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077577.8

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu