Pregenerated sensors for TTYH3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036565Ensembl transcript IDs: ENSMUST00000042661.8, ENSMUST00000197452.5, ENSMUST00000199157.2
Found 299 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCACGTGGGGGCAGATGGCTGGCCGGTGTGCGGTCTAGTGCCCGCTaGCGCTGGAGTCGGGGCGAGGCTGGCTCGTGGCGAGGTATTTGG | + |
|
Preference number: 1 (lower is better) Translates to: ARGGRWLAGVRSSAR*RWSRGEAGSWRGIW Trigger: CCAAATACCTCGCCACGAGCCAGCCTCGCCCCGACTCCAGCGGCAGCGGGCACTAGACCGCACACCGGCCAGCCATCTGCCCCCACGTGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197452.5 ENSMUST00000199157.2 |
||
| 3UTR CCA 90 bp | CGGTGCTGGCATAGGAAGGGTGGGGCATTGGCACGTGGGGGCAGATaGCTGGCCGGTGTGCGGTCTAGTGCCCGCTGCCGCTGGAGTCGG | + |
|
Preference number: 1 (lower is better) Translates to: RCWHRKGGALARGGR*LAGVRSSARCRWSR Trigger: CCGACTCCAGCGGCAGCGGGCACTAGACCGCACACCGGCCAGCCATCTGCCCCCACGTGCCAATGCCCCACCCTTCCTATGCCAGCACCG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197452.5 ENSMUST00000199157.2 |
||
| 3UTR CCA 90 bp | GGGGGCAGATGGCTGGCCGGTGTGCGGTCTAGTGCCCGCTGCCGCTaGAGTCGGGGCGAGGCTGGCTCGTGGCGAGGTATTTGGCTCTCA | + |
|
Preference number: 1 (lower is better) Translates to: GGRWLAGVRSSARCR*SRGEAGSWRGIWLS Trigger: TGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCCCCGACTCCAGCGGCAGCGGGCACTAGACCGCACACCGGCCAGCCATCTGCCCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199157.2 |
||
| 3UTR GCA 90 bp | CCAGCCTTGCCCCTCCCACCACATGCTGCTCCACTGGCCCGTAGCTaGCCATCTCACAGACCAGAGCTCACACTGGCTGGCTGGGCCAGG | + |
|
Preference number: 1 (lower is better) Translates to: PALPLPPHAAPLARS*PSHRPELTLAGWAR Trigger: CCTGGCCCAGCCAGCCAGTGTGAGCTCTGGTCTGTGAGATGGGCAGCTACGGGCCAGTGGAGCAGCATGTGGTGGGAGGGGCAAGGCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR GCA 90 bp | CTCCGGACCTTAGGCCAGGAACATACCCATAGTGGGCAGGCTGGCTaGAGCTGGGCTGCTCTGGCCCTGGAGGTTCCTGGCGCCAGGCCA | + |
|
Preference number: 1 (lower is better) Translates to: LRTLGQEHTHSGQAG*SWAALALEVPGARP Trigger: TGGCCTGGCGCCAGGAACCTCCAGGGCCAGAGCAGCCCAGCTGCAGCCAGCCTGCCCACTATGGGTATGTTCCTGGCCTAAGGTCCGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR TCA 90 bp | CGGAGGCAGGCAGGGTCAGGTTGCTGGTGGCAGCGACTGTCCAGGTaGGCACCCCAGAAGCCTCACTTCACAGGCTGGCCCGGAGCTCAT | + |
|
Preference number: 1 (lower is better) Translates to: RRQAGSGCWWQRLSR*APQKPHFTGWPGAH Trigger: ATGAGCTCCGGGCCAGCCTGTGAAGTGAGGCTTCTGGGGTGCTCACCTGGACAGTCGCTGCCACCAGCAACCTGACCCTGCCTGCCTCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 ENSMUST00000199157.2 |
||
| 3UTR GCA 90 bp | CCAGCACTGAGAGGCCAGGGAGTGACCTGGGCTCAGCTTGGCACCTaGTGTCTGGGGAGGGCTGGCTGGGCACTGAGGGAAGAGTCATGT | + |
|
Preference number: 1 (lower is better) Translates to: PALRGQGVTWAQLGT*CLGRAGWALREESC Trigger: ACATGACTCTTCCCTCAGTGCCCAGCCAGCCCTCCCCAGACAGCAGGTGCCAAGCTGAGCCCAGGTCACTCCCTGGCCTCTCAGTGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR CCA 90 bp | AGGAACATACCCATAGTGGGCAGGCTGGCTGCAGCTGGGCTGCTCTaGCCCTGGAGGTTCCTGGCGCCAGGCCAGTTGGAGTCAAGGCCA | + |
|
Preference number: 1 (lower is better) Translates to: RNIPIVGRLAAAGLL*PWRFLAPGQLESRP Trigger: TGGCCTTGACTCCAACTGGCCTGGCGCCAGGAACCTCCAGGGCCAGAGCAGCCCAGCTGCAGCCAGCCTGCCCACTATGGGTATGTTCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR CCA 90 bp | ACCTTAGGCCAGGAACATACCCATAGTGGGCAGGCTGGCTGCAGCTaGGCTGCTCTGGCCCTGGAGGTTCCTGGCGCCAGGCCAGTTGGA | + |
|
Preference number: 1 (lower is better) Translates to: TLGQEHTHSGQAGCS*AALALEVPGARPVG Trigger: TCCAACTGGCCTGGCGCCAGGAACCTCCAGGGCCAGAGCAGCCCAGCTGCAGCCAGCCTGCCCACTATGGGTATGTTCCTGGCCTAAGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR CCA 90 bp | CGGTCTAGTGCCCGCTGCCGCTGGAGTCGGGGCGAGGCTGGCTCGTaGCGAGGTATTTGGCTCTCATGCTGGAGGTGTACTGTCACTCTG | + |
|
Preference number: 1 (lower is better) Translates to: RSSARCRWSRGEAGS*RGIWLSCWRCTVTL Trigger: CAGAGTGACAGTACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCCCCGACTCCAGCGGCAGCGGGCACTAGACCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199157.2 |
||
| 3UTR CCA 90 bp | GGGAGTGACCTGGGCTCAGCTTGGCACCTGCTGTCTGGGGAGGGCTaGCTGGGCACTGAGGGAAGAGTCATGTGGGGAGGAGGTGTAAGA | + |
|
Preference number: 1 (lower is better) Translates to: GSDLGSAWHLLSGEG*LGTEGRVMWGGGVR Trigger: TCTTACACCTCCTCCCCACATGACTCTTCCCTCAGTGCCCAGCCAGCCCTCCCCAGACAGCAGGTGCCAAGCTGAGCCCAGGTCACTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR CCA 90 bp | ACAAAGAGACCCTGGTCACCTGTGGCCCACCAGCTAGCCACCTTCTaGGCCGGACAGAGCTGGGACCGGGTAGGGCAAGCTTTGGAGCTG | + |
|
Preference number: 1 (lower is better) Translates to: TKRPWSPVAHQLATF*AGQSWDRVGQALEL Trigger: CAGCTCCAAAGCTTGCCCTACCCGGTCCCAGCTCTGTCCGGCCCAGAAGGTGGCTAGCTGGTGGGCCACAGGTGACCAGGGTCTCTTTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR CCA 90 bp | AGCAGGTGGGCGCCAGGCACAGGGTCCCCTGCCTGTGAATGGAGATaGGATTCTCAGGAGTGTGGCGGTAGGGCAGTACCAGGAAAGGCT | + |
|
Preference number: 1 (lower is better) Translates to: SRWAPGTGSPACEWR*DSQECGGRAVPGKA Trigger: AGCCTTTCCTGGTACTGCCCTACCGCCACACTCCTGAGAATCCCATCTCCATTCACAGGCAGGGGACCCTGTGCCTGGCGCCCACCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR CCA 90 bp | GTGATGAGCAGGTGGGCGCCAGGCACAGGGTCCCCTGCCTGTGAATaGAGATGGGATTCTCAGGAGTGTGGCGGTAGGGCAGTACCAGGA | + |
|
Preference number: 1 (lower is better) Translates to: VMSRWAPGTGSPACE*RWDSQECGGRAVPG Trigger: TCCTGGTACTGCCCTACCGCCACACTCCTGAGAATCCCATCTCCATTCACAGGCAGGGGACCCTGTGCCTGGCGCCCACCTGCTCATCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR GCA 90 bp | CGGGCAGTGCCCGCCTCTCATGCTATATACATTCACCTTGTGGCCTaGTCACGGCCAGGGGGCAGCATTTGTGCTTCTGAGAGGCCCCAG | + |
|
Preference number: 1 (lower is better) Translates to: RAVPASHAIYIHLVA*SRPGGSICASERPQ Trigger: CTGGGGCCTCTCAGAAGCACAAATGCTGCCCCCTGGCCGTGAGCAGGCCACAAGGTGAATGTATATAGCATGAGAGGCGGGCACTGCCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR CCA 90 bp | ACGTCCGGGCAGTGCCCGCCTCTCATGCTATATACATTCACCTTGTaGCCTGCTCACGGCCAGGGGGCAGCATTTGTGCTTCTGAGAGGC | + |
|
Preference number: 1 (lower is better) Translates to: TSGQCPPLMLYTFTL*PAHGQGAAFVLLRG Trigger: GCCTCTCAGAAGCACAAATGCTGCCCCCTGGCCGTGAGCAGGCCACAAGGTGAATGTATATAGCATGAGAGGCGGGCACTGCCCGGACGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR GCA 90 bp | TCAGGACTCCCGAGACAGCACAAGTTCACAGCCACGTCCGGGCAGTaGCCGCCTCTCATGCTATATACATTCACCTTGTGGCCTGCTCAC | + |
|
Preference number: 1 (lower is better) Translates to: SGLPRQHKFTATSGQ*PPLMLYTFTLWPAH Trigger: GTGAGCAGGCCACAAGGTGAATGTATATAGCATGAGAGGCGGGCACTGCCCGGACGTGGCTGTGAACTTGTGCTGTCTCGGGAGTCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR CCA 90 bp | AACAGTAACACACAGCCATGGCCCTACAGAGGCTGGAGGGGAACTTaGGGCTGGCTCGATTCAGATGACATAGTCCACTGGGGGCAGATG | + |
|
Preference number: 1 (lower is better) Translates to: NSNTQPWPYRGWRGT*GWLDSDDIVHWGQM Trigger: CATCTGCCCCCAGTGGACTATGTCATCTGAATCGAGCCAGCCCCAAGTTCCCCTCCAGCCTCTGTAGGGCCATGGCTGTGTGTTACTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR GCA 90 bp | TTGTCCTGGGTGAGAATGAAACCGAGAGGAAAGTGGGCAGTGTCCTaGGTCGCCTATGTCCCAGACTGCCCTGGAGATGACAAGTGTGGT | + |
|
Preference number: 1 (lower is better) Translates to: LSWVRMKPRGKWAVS*VAYVPDCPGDDKCG Trigger: ACCACACTTGTCATCTCCAGGGCAGTCTGGGACATAGGCGACGCAGGACACTGCCCACTTTCCTCTCGGTTTCATTCTCACCCAGGACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | GTGTGCGGTCTAGTGCCCGCTGCCGCTGGAGTCGGGGCGAGGCTGGCTCGTGGCGAGTCGGGGCGAGGCTaGCTCGTGGCGAGGTATTTG | + |
|
Preference number: 2 (lower is better) Translates to: VCGLVPAAAGVGARLARGESGRG*LVARYL Trigger: CAAATACCTCGCCACGAGCCAGCCTCGCCCCGACTC...GCCACGAGCCAGCCTCGCCCCGACTCCAGCGGCAGCGGGCACTAGACCGCACAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197452.5 ENSMUST00000199157.2 |
||
| 3UTR CAA 90 bp | CCAGCAGGGCGGAAGCAGCGGTGCTGGCATAGGAAGGGTGGGGCATaGGCACGTGGGGGCAGATGGCTGGCCGGTGTGCGGTCTAGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: PAGRKQRCWHRKGGA*ARGGRWLAGVRSSA Trigger: GGCACTAGACCGCACACCGGCCAGCCATCTGCCCCCACGTGCCAATGCCCCACCCTTCCTATGCCAGCACCGCTGCTTCCGCCCTGCTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197452.5 ENSMUST00000199157.2 |
||
| 3UTR-3UTR GCA 90 bp | CACAGGCTGGCCCGGAGCTCATGCTGGGCACCTCCATGCCTCCTGCAGGGTGGGCTGGCCCGGAGCTCATaGTGGGCACCTCCATGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: HRLARSSCWAPPCLLQGGLARSS*WAPPCL Trigger: GAGGCATGGAGGTGCCCAGCATGAGCTCCGGGCCAG...CCCACCCTGCAGGAGGCATGGAGGTGCCCAGCATGAGCTCCGGGCCAGCCTGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 ENSMUST00000199157.2 |
||
| 3UTR-3UTR TCA 90 bp | CACAGGCTGGCCCGGAGCTCATGCTGGGCACCTCCATGCCTCCTGCAGGGTGGGCAGCGACTGTCCAGGTaGGCACCCCAGAAGCCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: HRLARSSCWAPPCLLQGGQRLSR*APQKPH Trigger: GTGAGGCTTCTGGGGTGCTCACCTGGACAGTCGCTG...CCCACCCTGCAGGAGGCATGGAGGTGCCCAGCATGAGCTCCGGGCCAGCCTGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 ENSMUST00000199157.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCGGAGCTCATGCTGGGCACCTCCATGCCTCCTGCAGGGTGGGTATAGCGGGGAGGGCTGGCCCGGTGTaGCTTGTGGAAGGTCCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: PGAHAGHLHASCRVGIAGRAGPV*LVEGPA Trigger: TGCTGGACCTTCCACAAGCCACACCGGGCCAGCCCT...CCCCGCTATACCCACCCTGCAGGAGGCATGGAGGTGCCCAGCATGAGCTCCGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 ENSMUST00000199157.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGTGCCTAGGGCTGGCCCGGTGTGGCTTGTGGAAGGTCCAGCAGGGCGGAAGCAGGGCTGGCCCGGTGTaGCTTGTGGAAGGTCCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: VCLGLARCGLWKVQQGGSRAGPV*LVEGPA Trigger: TGCTGGACCTTCCACAAGCCACACCGGGCCAGCCCT...GCTTCCGCCCTGCTGGACCTTCCACAAGCCACACCGGGCCAGCCCTAGGCACAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 ENSMUST00000199157.2 |
||
| 3UTR-3UTR CCA 90 bp | GGAGACGGAGGCAGGCAGGGTCAGGTTGCTGGTGGCAGCGACTGTCCAGGTGAGGCCCGGAGCTCATGCTaGGCACCTCCATGCCTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: GDGGRQGQVAGGSDCPGEARSSC*APPCLL Trigger: CAGGAGGCATGGAGGTGCCCAGCATGAGCTCCGGGC...CTCACCTGGACAGTCGCTGCCACCAGCAACCTGACCCTGCCTGCCTCCGTCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 ENSMUST00000199157.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGGTTCTGGGATCCGTAGCTGCCAGGTTGCTCCAGGAGGGCCACAGGTCTGTACCGGACCCCAGGACATaGTCCTCCTGGGGCAGCACC | + |
|
Preference number: 2 (lower is better) Translates to: GVLGSVAARLLQEGHRSVPDPRT*SSWGST Trigger: GGTGCTGCCCCAGGAGGAGCATGTCCTGGGGTCCGG...TACAGACCTGTGGCCCTCCTGGAGCAACCTGGCAGCTACGGATCCCAGAACCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | TGTGGCGGTAGGGCAGTACCAGGAAAGGCTCGCTGTAGCTGTGGGGAGGGGGACGCCCGGAGCTCATGCTaGGCACCTCCATGCCTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: CGGRAVPGKARCSCGEGDARSSC*APPCLL Trigger: CAGGAGGCATGGAGGTGCCCAGCATGAGCTCCGGGC...GTCCCCCTCCCCACAGCTACAGCGAGCCTTTCCTGGTACTGCCCTACCGCCACA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | GAAGGTCAGGACTCCCGAGACAGCACAAGTTCACAGCCACGTCCGGGCAGTGCCCAGGCTGGCTGCAGCTaGGCTGCTCTGGCCCTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: EGQDSRDSTSSQPRPGSAQAGCS*AALALE Trigger: CTCCAGGGCCAGAGCAGCCCAGCTGCAGCCAGCCTG...GGCACTGCCCGGACGTGGCTGTGAACTTGTGCTGTCTCGGGAGTCCTGACCTTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | GTGTGCCTAGGGCTGGCCCGGTGTGGCTTGTGGAAGGTCCAGCAGGGCGGAAGCGGCGAGGCTGGCTCGTaGCGAGGTATTTGGCTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: VCLGLARCGLWKVQQGGSGEAGS*RGIWLS Trigger: TGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCC...GCTTCCGCCCTGCTGGACCTTCCACAAGCCACACCGGGCCAGCCCTAGGCACAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199157.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGCCCCTCCCTGGCAGCACCCCACAAAGAAATGACCACTCTAGCCCTGGCTCCCTGGCCCGGAGCTCATaGTGGGCACCTCCATGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: WPLPGSTPQRNDHSSPGSLARSS*WAPPCL Trigger: GAGGCATGGAGGTGCCCAGCATGAGCTCCGGGCCAG...GGAGCCAGGGCTAGAGTGGTCATTTCTTTGTGGGGTGCTGCCAGGGAGGGGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | GCTGCCAGGTTGCTCCAGGAGGGCCACAGGTCTGTAAACCACTGGGTCCCAGCCGACCTGGGCTCAGCTTaGCACCTGCTGTCTGGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: AARLLQEGHRSVNHWVPADLGSA*HLLSGE Trigger: CTCCCCAGACAGCAGGTGCCAAGCTGAGCCCAGGTC...GGCTGGGACCCAGTGGTTTACAGACCTGTGGCCCTCCTGGAGCAACCTGGCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR TCA 90 bp | CTCCCACCACATGCTGCTCCACTGGCCCGTAGCTGCCCATCTCACAGACCAGAGCAGCGACTGTCCAGGTaGGCACCCCAGAAGCCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: LPPHAAPLARSCPSHRPEQRLSR*APQKPH Trigger: GTGAGGCTTCTGGGGTGCTCACCTGGACAGTCGCTG...CTCTGGTCTGTGAGATGGGCAGCTACGGGCCAGTGGAGCAGCATGTGGTGGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | AGGAGCCGTCTCCTCCGCAGGGGTCAGGGCGAGAAACCCCTGCTTTCATTTCCCCGGAAGCAGCGGTGCTaGCATAGGAAGGGTGGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: RSRLLRRGQGEKPLLSFPRKQRC*HRKGGA Trigger: TGCCCCACCCTTCCTATGCCAGCACCGCTGCTTCCG...GGGAAATGAAAGCAGGGGTTTCTCGCCCTGACCCCTGCGGAGGAGACGGCTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | GTTGCTGGTGGCAGCGACTGTCCAGGTGAGCACCCCAGAAGCCTCACTTCACAGGCCCGGTGTGGCTTGTaGAAGGTCCAGCAGGGCGGA | + |
|
Preference number: 2 (lower is better) Translates to: VAGGSDCPGEHPRSLTSQARCGL*KVQQGG Trigger: TCCGCCCTGCTGGACCTTCCACAAGCCACACCGGGC...CTGTGAAGTGAGGCTTCTGGGGTGCTCACCTGGACAGTCGCTGCCACCAGCAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 ENSMUST00000199157.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTCCAGCCCCCAAGGCTGGGCTCCAGAGGGCACTGCCGCTTGTCCTGGGTGAGGCCTGTGAATGGAGATaGGATTCTCAGGAGTGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: GPAPKAGLQRALPLVLGEACEWR*DSQECG Trigger: GCCACACTCCTGAGAATCCCATCTCCATTCACAGGC...CTCACCCAGGACAAGCGGCAGTGCCCTCTGGAGCCCAGCCTTGGGGGCTGGACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | CTCCCACCACATGCTGCTCCACTGGCCCGTAGCTGCCCATCTCACAGACCAGAGCTCACACTGGCTGGCTaGGCCAGGGTAGAGGCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: LPPHAAPLARSCPSHRPELTLAG*ARVEAP Trigger: TGGAGCCTCTACCCTGGCCCAGCCAGCCAGTGTGAG...CTCTGGTCTGTGAGATGGGCAGCTACGGGCCAGTGGAGCAGCATGTGGTGGGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR CAA 90 bp | TCACAGGTCCAGCCCCCAAGGCTGGGCTCCAGAGGGCACTGCCGCTaGTCCTGGGTGAGAATGAAACCGAGAGGAAAGTGGGCAGTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: SQVQPPRLGSRGHCR*SWVRMKPRGKWAVS Trigger: GGACACTGCCCACTTTCCTCTCGGTTTCATTCTCACCCAGGACAAGCGGCAGTGCCCTCTGGAGCCCAGCCTTGGGGGCTGGACCTGTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | GTTGCTGGTGGCAGCGACTGTCCAGGTGAGCACCCCAGAAGCCTCACTTCACAGCGGAAGCAGCGGTGCTaGCATAGGAAGGGTGGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: VAGGSDCPGEHPRSLTSQRKQRC*HRKGGA Trigger: TGCCCCACCCTTCCTATGCCAGCACCGCTGCTTCCG...CTGTGAAGTGAGGCTTCTGGGGTGCTCACCTGGACAGTCGCTGCCACCAGCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 ENSMUST00000199157.2 |
||
| 3UTR-3UTR CCA 90 bp | GGAGCTGAAGCCCAGGGGGTTCTGGGATCCGTAGCTGCCAGGTTGCTCCAGGAGAAACCGAGAGGAAAGTaGGCAGTGTCCTGCGTCGCC | + |
|
Preference number: 2 (lower is better) Translates to: GAEAQGVLGSVAARLLQEKPRGK*AVSCVA Trigger: GGCGACGCAGGACACTGCCCACTTTCCTCTCGGTTT...CTCCTGGAGCAACCTGGCAGCTACGGATCCCAGAACCCCCTGGGCTTCAGCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | GACCAATCACAGGCAGCTGGCACTGGACTGCTCACTCCCTGGGGATGTGGGGGTGGTCTGGCCCCTCCCTaGCAGCACCCCACAAAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: DQSQAAGTGLLTPWGCGGGLAPP*QHPTKK Trigger: TTTCTTTGTGGGGTGCTGCCAGGGAGGGGCCAGACC...ACCCCCACATCCCCAGGGAGTGAGCAGTCCAGTGCCAGCTGCCTGTGATTGGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR TCA 90 bp | GACCAATCACAGGCAGCTGGCACTGGACTGCTCACTCCCTGGGGATGTGGGGGTGTGCAAGGGGCAGCATaGAGGGTCACCTGTAGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: DQSQAAGTGLLTPWGCGGVQGAA*RVTCRR Trigger: CCTTCTACAGGTGACCCTTCATGCTGCCCCTTGCAC...ACCCCCACATCCCCAGGGAGTGAGCAGTCCAGTGCCAGCTGCCTGTGATTGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | CCAGTCCTATCAGTTTTCTCAGCCAGATCCCTCCTCCTGGCTCGGCAAGGGATCTGGCGCCAGGCCAGTTaGAGTCAAGGCCAGGGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: PVLSVFSARSLLLARQGIWRQAS*SQGQGP Trigger: GGGACCCTGGCCTTGACTCCAACTGGCCTGGCGCCA...GATCCCTTGCCGAGCCAGGAGGAGGGATCTGGCTGAGAAAACTGATAGGACTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | TGGGAGGCAATCTCACAAAATCACATATGGGAGGAAGGGTGCGGCACACCACCGGCAGCTGGGCTGCTCTaGCCCTGGAGGTTCCTGGCG | + |
|
Preference number: 2 (lower is better) Translates to: WEAISQNHIWEEGCGTPPAAGLL*PWRFLA Trigger: CGCCAGGAACCTCCAGGGCCAGAGCAGCCCAGCTGC...CGGTGGTGTGCCGCACCCTTCCTCCCATATGTGATTTTGTGAGATTGCCTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | GAGGCAATCTCACAAAATCACATATGGGAGGAAGGGTGCGGCACACCACCGCTGGCAGCTGGGCTGCTCTaGCCCTGGAGGTTCCTGGCG | + |
|
Preference number: 2 (lower is better) Translates to: EAISQNHIWEEGCGTPPLAAGLL*PWRFLA Trigger: CGCCAGGAACCTCCAGGGCCAGAGCAGCCCAGCTGC...CAGCGGTGGTGTGCCGCACCCTTCCTCCCATATGTGATTTTGTGAGATTGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR CAA 90 bp | GCCACGTCCGGGCAGTGCCCGCCTCTCATGCTATATACATTCACCTaGTGGCCTGCTCACGGCCAGGGGGCAGCATTTGTGCTTCTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: ATSGQCPPLMLYTFT*WPAHGQGAAFVLLR Trigger: TCTCAGAAGCACAAATGCTGCCCCCTGGCCGTGAGCAGGCCACAAGGTGAATGTATATAGCATGAGAGGCGGGCACTGCCCGGACGTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR TCA 90 bp | TGGGCCAGGGTAGAGGCTCCAGGTCCTGATTTGGAAGCTAATTCAGCCCAGAAGGGGCTGGCTGGGCACTaGGGGAAGAGTCATGTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: WARVEAPGPDLEANSAQKGLAGH*GKSHVG Trigger: CCCCACATGACTCTTCCCTCAGTGCCCAGCCAGCCC...CTTCTGGGCTGAATTAGCTTCCAAATCAGGACCTGGAGCCTCTACCCTGGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR GCA 90 bp | GGATCTTCTGCTACTCACATAAACCAGAGAGTGTTGGTTGGGGTGGGGGCCTCCCTGGCCCGGAGCTCATaGTGGGCACCTCCATGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: GSSATHINQRVLVGVGASLARSS*WAPPCL Trigger: GAGGCATGGAGGTGCCCAGCATGAGCTCCGGGCCAG...GGAGGCCCCCACCCCAACCAACACTCTCTGGTTTATGTGAGTAGCAGAAGATCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR GCA 90 bp | TCAAGGCCAGGGTCCCCTGCACTGATGTTGTCGTGCTTAGGAGCTACAGATGCCACTGGGTCCCAGCCTTaGCCCTCCCACCACATGCTG | + |
|
Preference number: 2 (lower is better) Translates to: SRPGSPALMLSCLGATDATGSQP*PSHHML Trigger: CAGCATGTGGTGGGAGGGGCAAGGCTGGGACCCAGT...GGCATCTGTAGCTCCTAAGCACGACAACATCAGTGCAGGGGACCCTGGCCTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR GCA 90 bp | GTGTGCCTAGGGCTGGCCCGGTGTGGCTTGTGGAAGGTCCAGCAGGGCGGAAGCGGTATTTGGCTCTCATaGTGGAGGTGTACTGTCACT | + |
|
Preference number: 2 (lower is better) Translates to: VCLGLARCGLWKVQQGGSGIWLS*WRCTVT Trigger: AGTGACAGTACACCTCCAGCATGAGAGCCAAATACC...GCTTCCGCCCTGCTGGACCTTCCACAAGCCACACCGGGCCAGCCCTAGGCACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199157.2 |
||
| 3UTR-3UTR CCA 90 bp | GGAGGCAATCTCACAAAATCACATATGGGAGGAAGGGTGCGGCACACCACCGCTGCCCGGTGTGGCTTGTaGAAGGTCCAGCAGGGCGGA | + |
|
Preference number: 2 (lower is better) Translates to: GGNLTKSHMGGRVRHTTAARCGL*KVQQGG Trigger: TCCGCCCTGCTGGACCTTCCACAAGCCACACCGGGC...AGCGGTGGTGTGCCGCACCCTTCCTCCCATATGTGATTTTGTGAGATTGCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | GGATCTTCTGCTACTCACATAAACCAGAGAGTGTTGGTTGGGGTGGGGGCCTCCGGCCAGGGAGTGACCTaGGCTCAGCTTGGCACCTGC | + |
|
Preference number: 2 (lower is better) Translates to: GSSATHINQRVLVGVGASGQGVT*AQLGTC Trigger: GCAGGTGCCAAGCTGAGCCCAGGTCACTCCCTGGCC...GGAGGCCCCCACCCCAACCAACACTCTCTGGTTTATGTGAGTAGCAGAAGATCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | CAGGCCGGGATCTTCTGCTACTCACATAAACCAGAGAGTGTTGGTTGGGGTGGGAGGACATGCTCCTCCTaGGGCAGCACCTGCCTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: QAGIFCYSHKPESVGWGGRTCSS*GSTCLG Trigger: CCCCAGGCAGGTGCTGCCCCAGGAGGAGCATGTCCT...CCCACCCCAACCAACACTCTCTGGTTTATGTGAGTAGCAGAAGATCCCGGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | CAGGCCGGGATCTTCTGCTACTCACATAAACCAGAGAGTGTTGGTTGGGGTGGGGGGGCTGAGGCCACATaGACTTCAGTCCCCGGACCC | + |
|
Preference number: 2 (lower is better) Translates to: QAGIFCYSHKPESVGWGGGAEAT*TSVPGP Trigger: GGGTCCGGGGACTGAAGTCCATGTGGCCTCAGCCCC...CCCACCCCAACCAACACTCTCTGGTTTATGTGAGTAGCAGAAGATCCCGGCCTG 60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | CCAGTCCTATCAGTTTTCTCAGCCAGATCCCTCCTCCTGGCTCGGCAAGGGATCAGAGCTCACACTGGCTaGCTGGGCCAGGGTAGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: PVLSVFSARSLLLARQGIRAHTG*LGQGRG Trigger: GCCTCTACCCTGGCCCAGCCAGCCAGTGTGAGCTCT...GATCCCTTGCCGAGCCAGGAGGAGGGATCTGGCTGAGAAAACTGATAGGACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | GATGGGATTCTCAGGAGTGTGGCGGTAGGGCAGTACCAGGAAAGGCTCGCTGTAGAGTCGGGGCGAGGCTaGCTCGTGGCGAGGTATTTG | + |
|
Preference number: 2 (lower is better) Translates to: DGILRSVAVGQYQERLAVESGRG*LVARYL Trigger: CAAATACCTCGCCACGAGCCAGCCTCGCCCCGACTC...TACAGCGAGCCTTTCCTGGTACTGCCCTACCGCCACACTCCTGAGAATCCCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | CCCGGAGCTCATGCTGGGCACCTCCATGCCTCCTGCAGGGTGGGTATAGCGGGGATTTGGCTCTCATGCTaGAGGTGTACTGTCACTCTG | + |
|
Preference number: 2 (lower is better) Translates to: PGAHAGHLHASCRVGIAGIWLSC*RCTVTL Trigger: CAGAGTGACAGTACACCTCCAGCATGAGAGCCAAAT...CCCCGCTATACCCACCCTGCAGGAGGCATGGAGGTGCCCAGCATGAGCTCCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199157.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTCTCATGCTATATACATTCACCTTGTGGCCTGCTCACGGCCAGGGGGCAGCAGCCCTCCGAGTCCTCTaGCCACTCCTTTTGGTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: PLMLYTFTLWPAHGQGAAALRVL*PLLLVP Trigger: TGGGACCAAAAGGAGTGGGCAGAGGACTCGGAGGGC...TGCTGCCCCCTGGCCGTGAGCAGGCCACAAGGTGAATGTATATAGCATGAGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | GGAGGCAATCTCACAAAATCACATATGGGAGGAAGGGTGCGGCACACCACCGCTAGGGCTGGCCCGGTGTaGCTTGTGGAAGGTCCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: GGNLTKSHMGGRVRHTTARAGPV*LVEGPA Trigger: TGCTGGACCTTCCACAAGCCACACCGGGCCAGCCCT...AGCGGTGGTGTGCCGCACCCTTCCTCCCATATGTGATTTTGTGAGATTGCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | CTCCCACCACATGCTGCTCCACTGGCCCGTAGCTGCCCATCTCACAGACCAGAGATGGGAAAGAGGGTTTaGCACCAAGAAGGTGGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LPPHAAPLARSCPSHRPEMGKRV*HQEGGQ Trigger: CTGGCCACCTTCTTGGTGCCAAACCCTCTTTCCCAT...CTCTGGTCTGTGAGATGGGCAGCTACGGGCCAGTGGAGCAGCATGTGGTGGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | CAAACATCACACACTAAAGCCAAAAGCACCTTAGGCAAGCGGTGTTCTGGGTGTAGTGCCCGCTGCCGCTaGAGTCGGGGCGAGGCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: QTSHTKAKSTLGKRCSGCSARCR*SRGEAG Trigger: GCCAGCCTCGCCCCGACTCCAGCGGCAGCGGGCACT...ACACCCAGAACACCGCTTGCCTAAGGTGCTTTTGGCTTTAGTGTGTGATGTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197452.5 |
||
| 3UTR-3UTR TCA 90 bp | TGGCCCCTCCCTGGCAGCACCCCACAAAGAAATGACCACTCTAGCCCTGGCTCCGCCACTCTTCAGGAATaGATGGGAAAGAGGGTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: WPLPGSTPQRNDHSSPGSATLQE*MGKRVW Trigger: CCAAACCCTCTTTCCCATTCATTCCTGAAGAGTGGC...GGAGCCAGGGCTAGAGTGGTCATTTCTTTGTGGGGTGCTGCCAGGGAGGGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | AGGGACCGTAACTGGGAGGCAATCTCACAAAATCACATATGGGAGGAAGGGTGCGCCCGGTGTGGCTTGTaGAAGGTCCAGCAGGGCGGA | + |
|
Preference number: 2 (lower is better) Translates to: RDRNWEAISQNHIWEEGCARCGL*KVQQGG Trigger: TCCGCCCTGCTGGACCTTCCACAAGCCACACCGGGC...GCACCCTTCCTCCCATATGTGATTTTGTGAGATTGCCTCCCAGTTACGGTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | GGAGCTGAAGCCCAGGGGGTTCTGGGATCCGTAGCTGCCAGGTTGCTCCAGGAGCTCCAGGTCCTGATTTaGAAGCTAATTCAGCCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: GAEAQGVLGSVAARLLQELQVLI*KLIQPR Trigger: TCTGGGCTGAATTAGCTTCCAAATCAGGACCTGGAG...CTCCTGGAGCAACCTGGCAGCTACGGATCCCAGAACCCCCTGGGCTTCAGCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR TCA 90 bp | ATGAAAAACAAAGAGACCCTGGTCACCTGTGGCCCACCAGCTAGCCACCTTCTGCAGCATTTGTGCTTCTaGGAGGCCCCAGGGCACACC | + |
|
Preference number: 2 (lower is better) Translates to: MKNKETLVTCGPPASHLLQHLCF*EAPGHT Trigger: GGTGTGCCCTGGGGCCTCTCAGAAGCACAAATGCTG...CAGAAGGTGGCTAGCTGGTGGGCCACAGGTGACCAGGGTCTCTTTGTTTTTCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR GCA 90 bp | GGATGCTCCAGGCCGGGATCTTCTGCTACTCACATAAACCAGAGAGTGTTGGTTCAGGCAGGGTCAGGTTaGTGGTGGCAGCGACTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: GCSRPGSSATHINQRVLVQAGSG*WWQRLS Trigger: GGACAGTCGCTGCCACCAGCAACCTGACCCTGCCTG...AACCAACACTCTCTGGTTTATGTGAGTAGCAGAAGATCCCGGCCTGGAGCATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | GGTAAGTGGCACCCCAGAAATCAGGAAAACGAAATGAAGCCAACCGCAGTGGTAGGCCAGGGAGTGACCTaGGCTCAGCTTGGCACCTGC | + |
|
Preference number: 2 (lower is better) Translates to: GKWHPRNQENEMKPTAVVGQGVT*AQLGTC Trigger: GCAGGTGCCAAGCTGAGCCCAGGTCACTCCCTGGCC...TACCACTGCGGTTGGCTTCATTTCGTTTTCCTGATTTCTGGGGTGCCACTTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | AGGAGCCGTCTCCTCCGCAGGGGTCAGGGCGAGAAACCCCTGCTTTCATTTCCCCTCTTCAGGAATGAATaGGAAAGAGGGTTTGGCACC | + |
|
Preference number: 2 (lower is better) Translates to: RSRLLRRGQGEKPLLSFPLFRNE*ERGFGT Trigger: GGTGCCAAACCCTCTTTCCCATTCATTCCTGAAGAG...GGGAAATGAAAGCAGGGGTTTCTCGCCCTGACCCCTGCGGAGGAGACGGCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | GGTAAGTGGCACCCCAGAAATCAGGAAAACGAAATGAAGCCAACCGCAGTGGTATGGCGCCAGGCCAGTTaGAGTCAAGGCCAGGGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: GKWHPRNQENEMKPTAVVWRQAS*SQGQGP Trigger: GGGACCCTGGCCTTGACTCCAACTGGCCTGGCGCCA...TACCACTGCGGTTGGCTTCATTTCGTTTTCCTGATTTCTGGGGTGCCACTTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | GTTTTCTCAGCCAGATCCCTCCTCCTGGCTCGGCAAGGGATCGGGCTCTGGTTTTTGGGTAATAGGGACTaGGGACCAATCACAGGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: VFSARSLLLARQGIGLWFLGNRD*GPITGS Trigger: GCTGCCTGTGATTGGTCCCCAGTCCCTATTACCCAA...AAACCAGAGCCCGATCCCTTGCCGAGCCAGGAGGAGGGATCTGGCTGAGAAAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | TCAAGGCCAGGGTCCCCTGCACTGATGTTGTCGTGCTTAGGAGCTACAGATGCCTCCCCTGCCTGTGAATaGAGATGGGATTCTCAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: SRPGSPALMLSCLGATDASPACE*RWDSQE Trigger: CTCCTGAGAATCCCATCTCCATTCACAGGCAGGGGA...GGCATCTGTAGCTCCTAAGCACGACAACATCAGTGCAGGGGACCCTGGCCTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | TATCAGTTTTCTCAGCCAGATCCCTCCTCCTGGCTCGGCAAGGGATCGGGCTCTTCCCCTGCCTGTGAATaGAGATGGGATTCTCAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: YQFSQPDPSSWLGKGSGSSPACE*RWDSQE Trigger: CTCCTGAGAATCCCATCTCCATTCACAGGCAGGGGA...AGAGCCCGATCCCTTGCCGAGCCAGGAGGAGGGATCTGGCTGAGAAAACTGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | CCTGGAGATGACAAGTGTGGTCAGTGCAAAAACAAAGGGGAAGACAAAGCTGCCCTGTCTGGGGAGGGCTaGCTGGGCACTGAGGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: PGDDKCGQCKNKGEDKAALSGEG*LGTEGR Trigger: TCTTCCCTCAGTGCCCAGCCAGCCCTCCCCAGACAG...GGCAGCTTTGTCTTCCCCTTTGTTTTTGCACTGACCACACTTGTCATCTCCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | GGATCTTCTGCTACTCACATAAACCAGAGAGTGTTGGTTGGGGTGGGGGCCTCCAGCCAGGAGTGCCCATaGCAGCTGAGAGTGAGGTTA | + |
|
Preference number: 2 (lower is better) Translates to: GSSATHINQRVLVGVGASSQECP*QLRVRL Trigger: TAACCTCACTCTCAGCTGCCATGGGCACTCCTGGCT...GGAGGCCCCCACCCCAACCAACACTCTCTGGTTTATGTGAGTAGCAGAAGATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR GCA 90 bp | TGGGCCAGGGTAGAGGCTCCAGGTCCTGATTTGGAAGCTAATTCAGCCCAGAAGGCCTATGTCCCAGACTaGCCTGGAGATGACAAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: WARVEAPGPDLEANSAQKAYVPD*PGDDKC Trigger: ACACTTGTCATCTCCAGGGCAGTCTGGGACATAGGC...CTTCTGGGCTGAATTAGCTTCCAAATCAGGACCTGGAGCCTCTACCCTGGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR GCA 90 bp | TGGGAGGCAATCTCACAAAATCACATATGGGAGGAAGGGTGCGGCACACCACCGAGGGCGAGAAACCCCTaGTTTCATTTCCCCTGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: WEAISQNHIWEEGCGTPPRARNP*FHFPCF Trigger: GAAGCAGGGGAAATGAAAGCAGGGGTTTCTCGCCCT...CGGTGGTGTGCCGCACCCTTCCTCCCATATGTGATTTTGTGAGATTGCCTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | TGGGAGGCAATCTCACAAAATCACATATGGGAGGAAGGGTGCGGCACACCACCGATGGGAAAGAGGGTTTaGCACCAAGAAGGTGGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: WEAISQNHIWEEGCGTPPMGKRV*HQEGGQ Trigger: CTGGCCACCTTCTTGGTGCCAAACCCTCTTTCCCAT...CGGTGGTGTGCCGCACCCTTCCTCCCATATGTGATTTTGTGAGATTGCCTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | CAGTGTCCTGCGTCGCCTATGTCCCAGACTGCCCTGGAGATGACAAGTGTGGTCCTCTTCAGGAATGAATaGGAAAGAGGGTTTGGCACC | + |
|
Preference number: 2 (lower is better) Translates to: QCPASPMSQTALEMTSVVLFRNE*ERGFGT Trigger: GGTGCCAAACCCTCTTTCCCATTCATTCCTGAAGAG...GACCACACTTGTCATCTCCAGGGCAGTCTGGGACATAGGCGACGCAGGACACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | GAGGCAATCTCACAAAATCACATATGGGAGGAAGGGTGCGGCACACCACCGCTGAAAACAAAGAGACCCTaGTCACCTGTGGCCCACCAG | + |
|
Preference number: 2 (lower is better) Translates to: EAISQNHIWEEGCGTPPLKTKRP*SPVAHQ Trigger: CTGGTGGGCCACAGGTGACCAGGGTCTCTTTGTTTT...CAGCGGTGGTGTGCCGCACCCTTCCTCCCATATGTGATTTTGTGAGATTGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | GAGGCAATCTCACAAAATCACATATGGGAGGAAGGGTGCGGCACACCACCGCTGGAGGGAAGAGTCATGTaGGGAGGAGGTGTAAGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: EAISQNHIWEEGCGTPPLEGRVM*GGGVRR Trigger: TCTTCTTACACCTCCTCCCCACATGACTCTTCCCTC...CAGCGGTGGTGTGCCGCACCCTTCCTCCCATATGTGATTTTGTGAGATTGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | ACTGGGAGGCAATCTCACAAAATCACATATGGGAGGAAGGGTGCGGCACACCACTCTGCCCACTCCTTTTaGTCCCAGACACCAGCACAA | + |
|
Preference number: 2 (lower is better) Translates to: TGRQSHKITYGRKGAAHHSAHSF*SQTPAQ Trigger: TTGTGCTGGTGTCTGGGACCAAAAGGAGTGGGCAGA...GTGGTGTGCCGCACCCTTCCTCCCATATGTGATTTTGTGAGATTGCCTCCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | AAACCCAAGCTGAATAGAGACCACAGAAATTACATGGACAAGAACTTTAGTTATCAGGCTGGCTGCAGCTaGGCTGCTCTGGCCCTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: KPKLNRDHRNYMDKNFSYQAGCS*AALALE Trigger: CTCCAGGGCCAGAGCAGCCCAGCTGCAGCCAGCCTG...ATAACTAAAGTTCTTGTCCATGTAATTTCTGTGGTCTCTATTCAGCTTGGGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR GCA 90 bp | GGTAAGTGGCACCCCAGAAATCAGGAAAACGAAATGAAGCCAACCGCAGTGGTAGACAAGTGTGGTCAGTaGAAAAACAAAGGGGAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: GKWHPRNQENEMKPTAVVDKCGQ*KNKGED Trigger: GTCTTCCCCTTTGTTTTTGCACTGACCACACTTGTC...TACCACTGCGGTTGGCTTCATTTCGTTTTCCTGATTTCTGGGGTGCCACTTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | GATTTGGAAGCTAATTCAGCCCAGAAGCACAGCAAACATCACACACTAAAGCCAGCCTGTGAATGGAGATaGGATTCTCAGGAGTGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: DLEANSAQKHSKHHTLKPACEWR*DSQECG Trigger: GCCACACTCCTGAGAATCCCATCTCCATTCACAGGC...TGGCTTTAGTGTGTGATGTTTGCTGTGCTTCTGGGCTGAATTAGCTTCCAAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | AAACCCAAGCTGAATAGAGACCACAGAAATTACATGGACAAGAACTTTAGTTATGGGGCTGAGGCCACATaGACTTCAGTCCCCGGACCC | + |
|
Preference number: 2 (lower is better) Translates to: KPKLNRDHRNYMDKNFSYGAEAT*TSVPGP Trigger: GGGTCCGGGGACTGAAGTCCATGTGGCCTCAGCCCC...ATAACTAAAGTTCTTGTCCATGTAATTTCTGTGGTCTCTATTCAGCTTGGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CCA 90 bp | AAACCCAAGCTGAATAGAGACCACAGAAATTACATGGACAAGAACTTTAGTTATTCTGCCCACTCCTTTTaGTCCCAGACACCAGCACAA | + |
|
Preference number: 2 (lower is better) Translates to: KPKLNRDHRNYMDKNFSYSAHSF*SQTPAQ Trigger: TTGTGCTGGTGTCTGGGACCAAAAGGAGTGGGCAGA...ATAACTAAAGTTCTTGTCCATGTAATTTCTGTGGTCTCTATTCAGCTTGGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR GCA 72 bp | GGGCATTGGCACGTGGGGGCAGATGGCTGGCCGGTGTaGGGTCTAGTGCCCGCTGCCGCTGGAGTCGGGGCG | + |
|
Preference number: 3 (lower is better) Translates to: GHWHVGADGWPV*GLVPAAAGVGA Trigger: CGCCCCGACTCCAGCGGCAGCGGGCACTAGACCGCACACCGGCCAGCCATCTGCCCCCACGTGCCAATGCCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197452.5 ENSMUST00000199157.2 |
||
| 3UTR CCA 72 bp | TGGCTGGCCGGTGTGCGGTCTAGTGCCCGCTGCCGCTaGAGTCGGGGCGAGGCTGGCTCGTGGCGAGGTATT | + |
|
Preference number: 3 (lower is better) Translates to: WLAGVRSSARCR*SRGEAGSWRGI Trigger: AATACCTCGCCACGAGCCAGCCTCGCCCCGACTCCAGCGGCAGCGGGCACTAGACCGCACACCGGCCAGCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197452.5 ENSMUST00000199157.2 |
||
| 3UTR CCA 72 bp | CTTCAGGTGTGCCTAGGGCTGGCCCGGTGTGGCTTGTaGAAGGTCCAGCAGGGCGGAAGCAGCGGTGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LQVCLGLARCGL*KVQQGGSSGAG Trigger: GCCAGCACCGCTGCTTCCGCCCTGCTGGACCTTCCACAAGCCACACCGGGCCAGCCCTAGGCACACCTGAAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 ENSMUST00000199157.2 |
||
| 3UTR CCA 72 bp | CCCTGGTCACCTGTGGCCCACCAGCTAGCCACCTTCTaGGCCGGACAGAGCTGGGACCGGGTAGGGCAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PWSPVAHQLATF*AGQSWDRVGQA Trigger: AGCTTGCCCTACCCGGTCCCAGCTCTGTCCGGCCCAGAAGGTGGCTAGCTGGTGGGCCACAGGTGACCAGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR CCA 72 bp | GCCCGCTGCCGCTGGAGTCGGGGCGAGGCTGGCTCGTaGCGAGGTATTTGGCTCTCATGCTGGAGGTGTACT | + |
|
Preference number: 3 (lower is better) Translates to: ARCRWSRGEAGS*RGIWLSCWRCT Trigger: AGTACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCCCCGACTCCAGCGGCAGCGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199157.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGCAGGGTCAGGTTGCTGGTGGCAGCGACTGTCCAGGTGAGCACCCCAGAAGCAGGAAGGGTGGGGCATaGGCACGTGGGGGCAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: RQGQVAGGSDCPGEHPRSRKGGA*ARGGRW Trigger: CCATCTGCCCCCACGTGCCAATGCCCCACCCTTCCT...GCTTCTGGGGTGCTCACCTGGACAGTCGCTGCCACCAGCAACCTGACCCTGCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 ENSMUST00000199157.2 |
||
| 3UTR TCA 72 bp | GCAGGGTCAGGTTGCTGGTGGCAGCGACTGTCCAGGTaGGCACCCCAGAAGCCTCACTTCACAGGCTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: AGSGCWWQRLSR*APQKPHFTGWP Trigger: GGGCCAGCCTGTGAAGTGAGGCTTCTGGGGTGCTCACCTGGACAGTCGCTGCCACCAGCAACCTGACCCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 ENSMUST00000199157.2 |
||
| 3UTR GCA 72 bp | CCCCTCCCACCACATGCTGCTCCACTGGCCCGTAGCTaGCCATCTCACAGACCAGAGCTCACACTGGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: PLPPHAAPLARS*PSHRPELTLAG Trigger: GCCAGCCAGTGTGAGCTCTGGTCTGTGAGATGGGCAGCTACGGGCCAGTGGAGCAGCATGTGGTGGGAGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR CCA 72 bp | CTGGGCTCAGCTTGGCACCTGCTGTCTGGGGAGGGCTaGCTGGGCACTGAGGGAAGAGTCATGTGGGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LGSAWHLLSGEG*LGTEGRVMWGG Trigger: TCCTCCCCACATGACTCTTCCCTCAGTGCCCAGCCAGCCCTCCCCAGACAGCAGGTGCCAAGCTGAGCCCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CAA 90 bp | TGGGGACCAATCACAGGCAGCTGGCACTGGACTGCTCACTCCCTGGGGATGTGGAGGAAGGGTGGGGCATaGGCACGTGGGGGCAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: WGPITGSWHWTAHSLGMWRKGGA*ARGGRW Trigger: CCATCTGCCCCCACGTGCCAATGCCCCACCCTTCCT...CCACATCCCCAGGGAGTGAGCAGTCCAGTGCCAGCTGCCTGTGATTGGTCCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CAA 90 bp | GGGTCTGGCCCCTCCCTGGCAGCACCCCACAAAGAAATGACCACTCTAGCCCTGAGGAAGGGTGGGGCATaGGCACGTGGGGGCAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: GSGPSLAAPHKEMTTLALRKGGA*ARGGRW Trigger: CCATCTGCCCCCACGTGCCAATGCCCCACCCTTCCT...CAGGGCTAGAGTGGTCATTTCTTTGTGGGGTGCTGCCAGGGAGGGGCCAGACCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CAA 90 bp | GTGCCTAGGGCTGGCCCGGTGTGGCTTGTGGAAGGTCCAGCAGGGCGGAAGCAGCTCGTGGCGAGGTATTaGGCTCTCATGCTGGAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: VPRAGPVWLVEGPAGRKQLVARY*ALMLEV Trigger: CACCTCCAGCATGAGAGCCAAATACCTCGCCACGAG...CTGCTTCCGCCCTGCTGGACCTTCCACAAGCCACACCGGGCCAGCCCTAGGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199157.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGTGCAAGGGGCAGCATGAAGGGTCACCTGTAGAAGGAACGCAGGCAGGGTGGGCAGGCAGGGTCAGGTaGCTGGTGGCAGCGACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: ECKGQHEGSPVEGTQAGWAGRVR*LVAATV Trigger: GACAGTCGCTGCCACCAGCAACCTGACCCTGCCTGC...CCACCCTGCCTGCGTTCCTTCTACAGGTGACCCTTCATGCTGCCCCTTGCACTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR TCA 72 bp | AAGGCAGGCGCCGGACGTTGCAAAGACCAGAGAGTATaGAGGGGCCGTTCGGTGATGAGCAGGTGGGCGCCA | + |
|
Preference number: 3 (lower is better) Translates to: KAGAGRCKDQRV*RGRSVMSRWAP Trigger: TGGCGCCCACCTGCTCATCACCGAACGGCCCCTTCATACTCTCTGGTCTTTGCAACGTCCGGCGCCTGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR GCA 72 bp | GGGGCGGGGTGGGCACAGGGAGAAGGGCTTGAAGGATaGTCCAGGCCGGGATCTTCTGCTACTCACATAAAC | + |
|
Preference number: 3 (lower is better) Translates to: GAGWAQGEGLEG*SRPGSSATHIN Trigger: GTTTATGTGAGTAGCAGAAGATCCCGGCCTGGAGCATCCTTCAAGCCCTTCTCCCTGTGCCCACCCCGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR CCA 72 bp | CCAAGGCTGGGCTCCAGAGGGCACTGCCGCTTGTCCTaGGTGAGAATGAAACCGAGAGGAAAGTGGGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: PRLGSRGHCRLS*VRMKPRGKWAV Trigger: CACTGCCCACTTTCCTCTCGGTTTCATTCTCACCCAGGACAAGCGGCAGTGCCCTCTGGAGCCCAGCCTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR CCA 72 bp | CAATCACAGGCAGCTGGCACTGGACTGCTCACTCCCTaGGGATGTGGGGGTGGACCACTGGGATTGAGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: QSQAAGTGLLTP*GCGGGPLGLSR Trigger: CCTACTCAATCCCAGTGGTCCACCCCCACATCCCCAGGGAGTGAGCAGTCCAGTGCCAGCTGCCTGTGATTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR CCA 72 bp | TGGAGTCGGGGCGAGGCTGGCTCGTGGCGAGGTATTTaGCTCTCATGCTGGAGGTGTACTGTCACTCTGACG | + |
|
Preference number: 3 (lower is better) Translates to: WSRGEAGSWRGI*LSCWRCTVTLT Trigger: CGTCAGAGTGACAGTACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCCCCGACTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199157.2 |
||
| 3UTR-3UTR CAA 90 bp | GGATCTTCTGCTACTCACATAAACCAGAGAGTGTTGGTTGGGGTGGGGGCCTCCGCAGGCAGGGTCAGGTaGCTGGTGGCAGCGACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: GSSATHINQRVLVGVGASAGRVR*LVAATV Trigger: GACAGTCGCTGCCACCAGCAACCTGACCCTGCCTGC...GGAGGCCCCCACCCCAACCAACACTCTCTGGTTTATGTGAGTAGCAGAAGATCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR CCA 72 bp | TGCCCATCTCACAGACCAGAGCTCACACTGGCTGGCTaGGCCAGGGTAGAGGCTCCAGGTCCTGATTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: CPSHRPELTLAG*ARVEAPGPDLE Trigger: TTCCAAATCAGGACCTGGAGCCTCTACCCTGGCCCAGCCAGCCAGTGTGAGCTCTGGTCTGTGAGATGGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR CCA 72 bp | CAGTCCTATCAGTTTTCTCAGCCAGATCCCTCCTCCTaGCTCGGCAAGGGATCGGGCTCTGGTTTGGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QSYQFSQPDPSS*LGKGSGSGLVA Trigger: AGCCACCAAACCAGAGCCCGATCCCTTGCCGAGCCAGGAGGAGGGATCTGGCTGAGAAAACTGATAGGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR CCA 72 bp | ACACAGCCATGGCCCTACAGAGGCTGGAGGGGAACTTaGGGCTGGCTCGATTCAGATGACATAGTCCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: TQPWPYRGWRGT*GWLDSDDIVHW Trigger: CCAGTGGACTATGTCATCTGAATCGAGCCAGCCCCAAGTTCCCCTCCAGCCTCTGTAGGGCCATGGCTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAAGGTCAGGACTCCCGAGACAGCACAAGTTCACAGCCACGTCCGGGCAGTAATGGGAAAGAGGGTTaGGCACCAAGAAGGTGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: TEGQDSRDSTSSQPRPGSNGKEG*APRRWP Trigger: TGGCCACCTTCTTGGTGCCAAACCCTCTTTCCCATT...ACTGCCCGGACGTGGCTGTGAACTTGTGCTGTCTCGGGAGTCCTGACCTTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR GCA 72 bp | GTGAGAATGAAACCGAGAGGAAAGTGGGCAGTGTCCTaGGTCGCCTATGTCCCAGACTGCCCTGGAGATGAC | + |
|
Preference number: 3 (lower is better) Translates to: VRMKPRGKWAVS*VAYVPDCPGDD Trigger: GTCATCTCCAGGGCAGTCTGGGACATAGGCGACGCAGGACACTGCCCACTTTCCTCTCGGTTTCATTCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR GCA 72 bp | CCCGCCTCTCATGCTATATACATTCACCTTGTGGCCTaGTCACGGCCAGGGGGCAGCATTTGTGCTTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: PASHAIYIHLVA*SRPGGSICASE Trigger: CTCAGAAGCACAAATGCTGCCCCCTGGCCGTGAGCAGGCCACAAGGTGAATGTATATAGCATGAGAGGCGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CAA 90 bp | GAGGCAATCTCACAAAATCACATATGGGAGGAAGGGTGCGGCACACCACCGCTGAGAGGGCACTGCCGCTaGTCCTGGGTGAGAATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: EAISQNHIWEEGCGTPPLRGHCR*SWVRMK Trigger: TTTCATTCTCACCCAGGACAAGCGGCAGTGCCCTCT...CAGCGGTGGTGTGCCGCACCCTTCCTCCCATATGTGATTTTGTGAGATTGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CAA 90 bp | GGATCTTCTGCTACTCACATAAACCAGAGAGTGTTGGTTGGGGTGGGGGCCTCCAGAGGGCACTGCCGCTaGTCCTGGGTGAGAATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GSSATHINQRVLVGVGASRGHCR*SWVRMK Trigger: TTTCATTCTCACCCAGGACAAGCGGCAGTGCCCTCT...GGAGGCCCCCACCCCAACCAACACTCTCTGGTTTATGTGAGTAGCAGAAGATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGGAGGCAATCTCACAAAATCACATATGGGAGGAAGGGTGCGGCACACCACCTCTGCCCACTCCTTTaGGTCCCAGACACCAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: TGRQSHKITYGRKGAAHHLCPLL*VPDTST Trigger: TGTGCTGGTGTCTGGGACCAAAAGGAGTGGGCAGAG...GTGGTGTGCCGCACCCTTCCTCCCATATGTGATTTTGTGAGATTGCCTCCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCCGGGATCTTCTGCTACTCACATAAACCAGAGAGTGTTGGTTGGGGTGGGGCTCCAGGTCCTGATTaGGAAGCTAATTCAGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QAGIFCYSHKPESVGWGGAPGPD*EANSAQ Trigger: CTGGGCTGAATTAGCTTCCAAATCAGGACCTGGAGC...CCCACCCCAACCAACACTCTCTGGTTTATGTGAGTAGCAGAAGATCCCGGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR TCA 72 bp | GTCCTGCGTCGCCTATGTCCCAGACTGCCCTGGAGATaGCAAGTGTGGTCAGTGCAAAAACAAAGGGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: VLRRLCPRLPWR*QVWSVQKQRGR Trigger: TCTTCCCCTTTGTTTTTGCACTGACCACACTTGTCATCTCCAGGGCAGTCTGGGACATAGGCGACGCAGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR CCA 72 bp | TCCACTGGGGGCAGATGCAGGCAGAGGGACCGTAACTaGGAGGCAATCTCACAAAATCACATATGGGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: STGGRCRQRDRN*EAISQNHIWEE Trigger: TTCCTCCCATATGTGATTTTGTGAGATTGCCTCCCAGTTACGGTCCCTCTGCCTGCATCTGCCCCCAGTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR-3UTR CAA 90 bp | CAAACATCACACACTAAAGCCAAAAGCACCTTAGGCAAGCGGTGTTCTGGGTGTAATGGGAAAGAGGGTTaGGCACCAAGAAGGTGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: QTSHTKAKSTLGKRCSGCNGKEG*APRRWP Trigger: TGGCCACCTTCTTGGTGCCAAACCCTCTTTCCCATT...ACACCCAGAACACCGCTTGCCTAAGGTGCTTTTGGCTTTAGTGTGTGATGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR CCA 72 bp | ATCTTCTGCTACTCACATAAACCAGAGAGTGTTGGTTaGGGTGGGGGCCTCCAGTCCTATCAGTTTTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: IFCYSHKPESVG*GGGLQSYQFSQ Trigger: CTGAGAAAACTGATAGGACTGGAGGCCCCCACCCCAACCAACACTCTCTGGTTTATGTGAGTAGCAGAAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR GCA 90 bp | GTGCGGTCTAGTGCCCGCTGCCGCTGGAGTCGGGGCGAGGCTGGCTCGTGGCGAAGGCTGTCATGTGCCTaGCGCGGCCCTGGCGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VRSSARCRWSRGEAGSWRRLSCA*RGPGAV Trigger: GACTGCGCCAGGGCCGCGGCAGGCACATGACAGCCT...TCGCCACGAGCCAGCCTCGCCCCGACTCCAGCGGCAGCGGGCACTAGACCGCAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197452.5 ENSMUST00000199157.2 |
||
| CDS-3UTR CCA 90 bp | GTGCGGTCTAGTGCCCGCTGCCGCTGGAGTCGGGGCGAGGCTGGCTCGTGGCGAGGTGTGGGCAGCGGCTaGGATGCTGGCTTCGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VRSSARCRWSRGEAGSWRGVGSG*DAGFAA Trigger: GGCAGCGAAGCCAGCATCCCAGCCGCTGCCCACACC...TCGCCACGAGCCAGCCTCGCCCCGACTCCAGCGGCAGCGGGCACTAGACCGCAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197452.5 ENSMUST00000199157.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGCCTAGGGCTGGCCCGGTGTGGCTTGTGGAAGGTCCAGCAGGGCGGAAGCTGCCTGCCGCGGCCCTaGCGCAGTCTCTTCCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VCLGLARCGLWKVQQGGSCLPRP*RSLFLP Trigger: GGGGAGGAAGAGACTGCGCCAGGGCCGCGGCAGGCA...GCTTCCGCCCTGCTGGACCTTCCACAAGCCACACCGGGCCAGCCCTAGGCACAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 ENSMUST00000199157.2 |
||
| CDS-3UTR CCA 90 bp | GTGCCTAGGGCTGGCCCGGTGTGGCTTGTGGAAGGTCCAGCAGGGCGGAAGCAGTGCCTGCCGCGGCCCTaGCGCAGTCTCTTCCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VPRAGPVWLVEGPAGRKQCLPRP*RSLFLP Trigger: GGGGAGGAAGAGACTGCGCCAGGGCCGCGGCAGGCA...CTGCTTCCGCCCTGCTGGACCTTCCACAAGCCACACCGGGCCAGCCCTAGGCAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 ENSMUST00000199157.2 |
||
| CDS-3UTR GCA 90 bp | GGTGGGGCATTGGCACGTGGGGGCAGATGGCTGGCCGGTGTGCGGTCTAGTGCCGCGGTCCTGGACCCCTaGCACTGTGCGGTTGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: GGALARGGRWLAGVRSSAAVLDP*HCAVGM Trigger: CATGCCAACCGCACAGTGGCAGGGGTCCAGGACCGC...GGCACTAGACCGCACACCGGCCAGCCATCTGCCCCCACGTGCCAATGCCCCACC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000197452.5 |
||
| CDS-3UTR GCA 90 bp | GTGTGCGGTCTAGTGCCCGCTGCCGCTGGAGTCGGGGCGAGGCTGGCTCGTGGCCCAGAGCCTTGTGGCTaGCCGACAGCTTCTGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VCGLVPAAAGVGARLARGPEPCG*PTASAG Trigger: TCCAGCAGAAGCTGTCGGGCAGCCACAAGGCTCTGG...GCCACGAGCCAGCCTCGCCCCGACTCCAGCGGCAGCGGGCACTAGACCGCACAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197452.5 |
||
| 3UTR CAA 72 bp | CGGAAGCAGCGGTGCTGGCATAGGAAGGGTGGGGCATaGGCACGTGGGGGCAGATGGCTGGCCGGTGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RKQRCWHRKGGA*ARGGRWLAGVR Trigger: CCGCACACCGGCCAGCCATCTGCCCCCACGTGCCAATGCCCCACCCTTCCTATGCCAGCACCGCTGCTTCCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 ENSMUST00000199157.2 |
||
| CDS-3UTR GCA 90 bp | GTGTGCCTAGGGCTGGCCCGGTGTGGCTTGTGGAAGGTCCAGCAGGGCGGAAGCAGTCCAGGTGCAAGCTaGGGCAGTCCACCAGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VCLGLARCGLWKVQQGGSSPGAS*GSPPGR Trigger: CCGCCCTGGTGGACTGCCGCAGCTTGCACCTGGACT...GCTTCCGCCCTGCTGGACCTTCCACAAGCCACACCGGGCCAGCCCTAGGCACAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR GCA 90 bp | CCGCTGCCGCTGGAGTCGGGGCGAGGCTGGCTCGTGGCGAGGTATTTGGCTCTCGCCAGCCTGCATGGCTaGCAGAGTCCAAGGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLPLESGRGWLVARYLALASLHG*QSPRQP Trigger: TGGCTGCCTTGGACTCTGGCAGCCATGCAGGCTGGC...GAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCCCCGACTCCAGCGGCAGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199157.2 |
||
| CDS-3UTR CCA 90 bp | GCCGGTGTGCGGTCTAGTGCCCGCTGCCGCTGGAGTCGGGGCGAGGCTGGCTCGCTCCCCATCGTCATCTaGACCTCTCTTCTGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGVRSSARCRWSRGEAGSLPIVI*TSLLLP Trigger: TGGCAGCAGAAGAGAGGTCCAGATGACGATGGGGAG...CGAGCCAGCCTCGCCCCGACTCCAGCGGCAGCGGGCACTAGACCGCACACCGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197452.5 |
||
| CDS-3UTR GCA 90 bp | TGCTGGCATAGGAAGGGTGGGGCATTGGCACGTGGGGGCAGATGGCTGGCCGGTGTAAAGGCTGTCATGTaGCTGCCGCGGCCCTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: CWHRKGGALARGGRWLAGVKAVM*LPRPWR Trigger: GCGCCAGGGCCGCGGCAGGCACATGACAGCCTTTAC...ACCGGCCAGCCATCTGCCCCCACGTGCCAATGCCCCACCCTTCCTATGCCAGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 ENSMUST00000199157.2 |
||
| CDS-3UTR GCA 90 bp | GGGTCTGGCCCCTCCCTGGCAGCACCCCACAAAGAAATGACCACTCTAGCCCTGCACCGCAGGTCGAAGTaGGGCAGCCGGTGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSGPSLAAPHKEMTTLALHRRSK*GSRCRR Trigger: CCTCCTGCACCGGCTGCCGCACTTCGACCTGCGGTG...CAGGGCTAGAGTGGTCATTTCTTTGTGGGGTGCTGCCAGGGAGGGGCCAGACCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR GCA 90 bp | CAGGGTCAGGTTGCTGGTGGCAGCGACTGTCCAGGTGAGCACCCCAGAAGCCTCAGTCCAGGTGCAAGCTaGGGCAGTCCACCAGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QGQVAGGSDCPGEHPRSLSPGAS*GSPPGR Trigger: CCGCCCTGGTGGACTGCCGCAGCTTGCACCTGGACT...GAGGCTTCTGGGGTGCTCACCTGGACAGTCGCTGCCACCAGCAACCTGACCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR GCA 90 bp | GTCGGGGCGAGGCTGGCTCGTGGCGAGGTATTTGGCTCTCATGCTGGAGGTGTAAGGCTGTCATGTGCCTaGCGCGGCCCTGGCGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VGARLARGEVFGSHAGGVRLSCA*RGPGAV Trigger: GACTGCGCCAGGGCCGCGGCAGGCACATGACAGCCT...TACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCCCCGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199157.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGCCTAGGGCTGGCCCGGTGTGGCTTGTGGAAGGTCCAGCAGGGCGGAAGCTCCACCAGAGCCTTGTaGCTGCCCGACAGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VCLGLARCGLWKVQQGGSSTRAL*LPDSFC Trigger: GCAGAAGCTGTCGGGCAGCCACAAGGCTCTGGTGGA...GCTTCCGCCCTGCTGGACCTTCCACAAGCCACACCGGGCCAGCCCTAGGCACAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CCA 90 bp | GGCCTTCTGAGGCTGGGGGCACATTCACAGCCGTCACAGGTCCAGCCCCCAAGGGCATTGCTGACGGTGTaGGCAGCGGCTGGGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLLRLGAHSQPSQVQPPRALLTV*AAAGML Trigger: CAGCATCCCAGCCGCTGCCCACACCGTCAGCAATGC...CCTTGGGGGCTGGACCTGTGACGGCTGTGAATGTGCCCCCAGCCTCAGAAGGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR TCA 90 bp | CAGGGTCAGGTTGCTGGTGGCAGCGACTGTCCAGGTGAGCACCCCAGAAGCCTCCCTTGGAGCTTCGGATaGGGCCCACCAGCACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QGQVAGGSDCPGEHPRSLPWSFG*GPPAPG Trigger: TCCTGGTGCTGGTGGGCCTCATCCGAAGCTCCAAGG...GAGGCTTCTGGGGTGCTCACCTGGACAGTCGCTGCCACCAGCAACCTGACCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR GCA 90 bp | TGGCCCCTCCCTGGCAGCACCCCACAAAGAAATGACCACTCTAGCCCTGGCTCCGCGGTCCTGGACCCCTaGCACTGTGCGGTTGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: WPLPGSTPQRNDHSSPGSAVLDP*HCAVGM Trigger: CATGCCAACCGCACAGTGGCAGGGGTCCAGGACCGC...GGAGCCAGGGCTAGAGTGGTCATTTCTTTGTGGGGTGCTGCCAGGGAGGGGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR GCA 90 bp | CTCCCACCACATGCTGCTCCACTGGCCCGTAGCTGCCCATCTCACAGACCAGAGAGGGTCTGCAGCCGCTaGACAGCCCTCAGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPPHAAPLARSCPSHRPERVCSR*TALSGS Trigger: GGAGCCACTGAGGGCTGTGCAGCGGCTGCAGACCCT...CTCTGGTCTGTGAGATGGGCAGCTACGGGCCAGTGGAGCAGCATGTGGTGGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CCA 90 bp | GGCCCCTCCCTGGCAGCACCCCACAAAGAAATGACCACTCTAGCCCTGGCTCCATCCTCGGGCCGGAATTaGCTGCTGGTGGCCTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GPSLAAPHKEMTTLALAPSSGRN*LLVASH Trigger: GTGGGAGGCCACCAGCAGCCAATTCCGGCCCGAGGA...TGGAGCCAGGGCTAGAGTGGTCATTTCTTTGTGGGGTGCTGCCAGGGAGGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CCA 90 bp | CCCGGAGCTCATGCTGGGCACCTCCATGCCTCCTGCAGGGTGGGTATAGCGGGGCTACGCAGAAGTCGCTaGAGCCCACAGACACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PGAHAGHLHASCRVGIAGLRRSR*SPQTQP Trigger: TGGCTGTGTCTGTGGGCTCCAGCGACTTCTGCGTAG...CCCCGCTATACCCACCCTGCAGGAGGCATGGAGGTGCCCAGCATGAGCTCCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CCA 90 bp | CACAGGCTGGCCCGGAGCTCATGCTGGGCACCTCCATGCCTCCTGCAGGGTGGGAGGGCGGTGAGGTGCTaGAGATTCACTTCCGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HRLARSSCWAPPCLLQGGRAVRC*RFTSVP Trigger: TGGAACGGAAGTGAATCTCCAGCACCTCACCGCCCT...CCCACCCTGCAGGAGGCATGGAGGTGCCCAGCATGAGCTCCGGGCCAGCCTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CCA 90 bp | GAGTGCAAGGGGCAGCATGAAGGGTCACCTGTAGAAGGAACGCAGGCAGGGTGGGGTGTGGGCAGCGGCTaGGATGCTGGCTTCGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ECKGQHEGSPVEGTQAGWGVGSG*DAGFAA Trigger: GGCAGCGAAGCCAGCATCCCAGCCGCTGCCCACACC...CCACCCTGCCTGCGTTCCTTCTACAGGTGACCCTTCATGCTGCCCCTTGCACTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR TCA 90 bp | GGAGACGGAGGCAGGCAGGGTCAGGTTGCTGGTGGCAGCGACTGTCCAGGTGAGAGTCCACCAGGGCGGTaGGGTGCTGGAGATTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: GDGGRQGQVAGGSDCPGESPPGR*GAGDSL Trigger: AAGTGAATCTCCAGCACCTCACCGCCCTGGTGGACT...CTCACCTGGACAGTCGCTGCCACCAGCAACCTGACCCTGCCTGCCTCCGTCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR GCA 90 bp | TGGAGATGGGATTCTCAGGAGTGTGGCGGTAGGGCAGTACCAGGAAAGGCTCGCCACCGCAGGTCGAAGTaGGGCAGCCGGTGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WRWDSQECGGRAVPGKARHRRSK*GSRCRR Trigger: CCTCCTGCACCGGCTGCCGCACTTCGACCTGCGGTG...GCGAGCCTTTCCTGGTACTGCCCTACCGCCACACTCCTGAGAATCCCATCTCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR GCA 90 bp | GCTGCCAGGTTGCTCCAGGAGGGCCACAGGTCTGTAAACCACTGGGTCCCAGCCGCCGTAGAATCCCACTaGAATGCCCGCGCTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: AARLLQEGHRSVNHWVPAAVESH*NARAAD Trigger: GTCTGCAGCGCGGGCATTGCAGTGGGATTCTACGGC...GGCTGGGACCCAGTGGTTTACAGACCTGTGGCCCTCCTGGAGCAACCTGGCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CCA 90 bp | GTTGCTGGTGGCAGCGACTGTCCAGGTGAGCACCCCAGAAGCCTCACTTCACAGGCCGGAATTGGCTGCTaGTGGCCTCCCACCGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VAGGSDCPGEHPRSLTSQAGIGC*WPPTAG Trigger: ACCTGCGGTGGGAGGCCACCAGCAGCCAATTCCGGC...CTGTGAAGTGAGGCTTCTGGGGTGCTCACCTGGACAGTCGCTGCCACCAGCAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CCA 90 bp | GCTGCCAGGTTGCTCCAGGAGGGCCACAGGTCTGTAAACCACTGGGTCCCAGCCTCTGCTGGAAGGGGTTaGTGGCACGGGGTGAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: AARLLQEGHRSVNHWVPASAGRG*WHGVSK Trigger: CTTGCTCACCCCGTGCCACCAACCCCTTCCAGCAGA...GGCTGGGACCCAGTGGTTTACAGACCTGTGGCCCTCCTGGAGCAACCTGGCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CCA 90 bp | GCTGCCAGGTTGCTCCAGGAGGGCCACAGGTCTGTAAACCACTGGGTCCCAGCCTCCACCAGAGCCTTGTaGCTGCCCGACAGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AARLLQEGHRSVNHWVPASTRAL*LPDSFC Trigger: GCAGAAGCTGTCGGGCAGCCACAAGGCTCTGGTGGA...GGCTGGGACCCAGTGGTTTACAGACCTGTGGCCCTCCTGGAGCAACCTGGCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CCA 90 bp | GTCGGGGCGAGGCTGGCTCGTGGCGAGGTATTTGGCTCTCATGCTGGAGGTGTAGCATTGCTGACGGTGTaGGCAGCGGCTGGGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VGARLARGEVFGSHAGGVALLTV*AAAGML Trigger: CAGCATCCCAGCCGCTGCCCACACCGTCAGCAATGC...TACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCCCCGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199157.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGGGAGACGGAGGCAGGCAGGGTCAGGTTGCTGGTGGCAGCGACTGTCCAGCATGTACTCGGTGACTaGGGCATTGCTGACGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AGETEAGRVRLLVAATVQHVLGD*GIADGV Trigger: CACACCGTCAGCAATGCCCCAGTCACCGAGTACATG...CTGGACAGTCGCTGCCACCAGCAACCTGACCCTGCCTGCCTCCGTCTCCCCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000199157.2 |
||
| CDS-3UTR CCA 90 bp | AGGAGCCGTCTCCTCCGCAGGGGTCAGGGCGAGAAACCCCTGCTTTCATTTCCCGAGTCGGGGCGAGGCTaGCTCGTGGCGAGGTATTTG | + |
|
Preference number: 4 (lower is better) Translates to: RSRLLRRGQGEKPLLSFPESGRG*LVARYL Trigger: CAAATACCTCGCCACGAGCCAGCCTCGCCCCGACTC...GGGAAATGAAAGCAGGGGTTTCTCGCCCTGACCCCTGCGGAGGAGACGGCTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042661.8 |
||
| CDS-3UTR GCA 90 bp | GAAGCCAACCGCAGTGGTAGGAGCCGTCTCCTCCGCAGGGGTCAGGGCGAGAAACGCTGGTCTCGCCGTTaGCGTAGAATCCCACTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: EANRSGRSRLLRRGQGEKRWSRR*RRIPLQ Trigger: TTGCAGTGGGATTCTACGGCAACGGCGAGACCAGCG...TTTCTCGCCCTGACCCCTGCGGAGGAGACGGCTCCTACCACTGCGGTTGGCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR GCA 90 bp | GTTTTCTCAGCCAGATCCCTCCTCCTGGCTCGGCAAGGGATCGGGCTCTGGTTTAGGGTCTGCAGCCGCTaGACAGCCCTCAGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VFSARSLLLARQGIGLWFRVCSR*TALSGS Trigger: GGAGCCACTGAGGGCTGTGCAGCGGCTGCAGACCCT...AAACCAGAGCCCGATCCCTTGCCGAGCCAGGAGGAGGGATCTGGCTGAGAAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR GCA 90 bp | CCCGGAGCTCATGCTGGGCACCTCCATGCCTCCTGCAGGGTGGGTATAGCGGGGCCACTCAGTACTGAGTaGTCCTCCACCATCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGAHAGHLHASCRVGIAGPLSTE*SSTILV Trigger: GACCAAGATGGTGGAGGAGCACTCAGTACTGAGTGG...CCCCGCTATACCCACCCTGCAGGAGGCATGGAGGTGCCCAGCATGAGCTCCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR GCA 90 bp | GTTTTCTCAGCCAGATCCCTCCTCCTGGCTCGGCAAGGGATCGGGCTCTGGTTTGTAAAGGCTGTCATGTaGCTGCCGCGGCCCTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VFSARSLLLARQGIGLWFVKAVM*LPRPWR Trigger: GCGCCAGGGCCGCGGCAGGCACATGACAGCCTTTAC...AAACCAGAGCCCGATCCCTTGCCGAGCCAGGAGGAGGGATCTGGCTGAGAAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR GCA 90 bp | GGTGGGGCATTGGCACGTGGGGGCAGATGGCTGGCCGGTGTGCGGTCTAGTGCCTCCATGGGTTTAAATTaGCAGCCTGCATGGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGALARGGRWLAGVRSSASMGLN*QPAWLP Trigger: TGGCAGCCATGCAGGCTGGCAATTTAAACCCATGGA...GGCACTAGACCGCACACCGGCCAGCCATCTGCCCCCACGTGCCAATGCCCCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199157.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTCATGCTATATACATTCACCTTGTGGCCTGCTCACGGCCAGGGGGCAGCATCCCACACGCGGTCCTaGACCCCTGCCACTGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PLMLYTFTLWPAHGQGAASHTRS*TPATVR Trigger: CCGCACAGTGGCAGGGGTCCAGGACCGCGTGTGGGA...TGCTGCCCCCTGGCCGTGAGCAGGCCACAAGGTGAATGTATATAGCATGAGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CCA 90 bp | TGGGCCAGGGTAGAGGCTCCAGGTCCTGATTTGGAAGCTAATTCAGCCCAGAAGTGCCTGCCGCGGCCCTaGCGCAGTCTCTTCCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: WARVEAPGPDLEANSAQKCLPRP*RSLFLP Trigger: GGGGAGGAAGAGACTGCGCCAGGGCCGCGGCAGGCA...CTTCTGGGCTGAATTAGCTTCCAAATCAGGACCTGGAGCCTCTACCCTGGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CCA 90 bp | CGGTGCTGGCATAGGAAGGGTGGGGCATTGGCACGTGGGGGCAGATGGCTGGCCATTTGGCTCTCATGCTaGAGGTGTATGAGGGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RCWHRKGGALARGGRWLAIWLSC*RCMRAV Trigger: CACCGCCCTCATACACCTCCAGCATGAGAGCCAAAT...GGCCAGCCATCTGCCCCCACGTGCCAATGCCCCACCCTTCCTATGCCAGCACCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042661.8 |
||
| CDS-3UTR CCA 90 bp | ATGAAAAACAAAGAGACCCTGGTCACCTGTGGCCCACCAGCTAGCCACCTTCTGAGTGCCCGCTGCCGCTaGAGTCGGGGCGAGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: MKNKETLVTCGPPASHLLSARCR*SRGEAG Trigger: GCCAGCCTCGCCCCGACTCCAGCGGCAGCGGGCACT...CAGAAGGTGGCTAGCTGGTGGGCCACAGGTGACCAGGGTCTCTTTGTTTTTCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042661.8 |
||
| CDS-3UTR CCA 90 bp | GTGCCTAGGGCTGGCCCGGTGTGGCTTGTGGAAGGTCCAGCAGGGCGGAAGCAGAATGTACTCGGTGACTaGGGCATTGCTGACGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VPRAGPVWLVEGPAGRKQNVLGD*GIADGV Trigger: CACACCGTCAGCAATGCCCCAGTCACCGAGTACATT...CTGCTTCCGCCCTGCTGGACCTTCCACAAGCCACACCGGGCCAGCCCTAGGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197452.5 |
||
| 3UTR CAA 72 bp | CAGCCCCCAAGGCTGGGCTCCAGAGGGCACTGCCGCTaGTCCTGGGTGAGAATGAAACCGAGAGGAAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QPPRLGSRGHCR*SWVRMKPRGKW Trigger: CCACTTTCCTCTCGGTTTCATTCTCACCCAGGACAAGCGGCAGTGCCCTCTGGAGCCCAGCCTTGGGGGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR CAA 72 bp | TCTAGCCCTGGCTCCAGGCTAGACTTAGGGTCACGCTaGCTGGCTCAGGGTCAGCCAGGAGTGCCCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSPGSRLDLGSR*LAQGQPGVPMA Trigger: TGCCATGGGCACTCCTGGCTGACCCTGAGCCAGCAAGCGTGACCCTAAGTCTAGCCTGGAGCCAGGGCTAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR GCA 90 bp | CCAGTCCTATCAGTTTTCTCAGCCAGATCCCTCCTCCTGGCTCGGCAAGGGATCAAGTGCGGCAGCCGGTaGAGGAGGCTCACCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: PVLSVFSARSLLLARQGIKCGSR*RRLTHQ Trigger: CTGGTGGGTGAGCCTCCTGCACCGGCTGCCGCACTT...GATCCCTTGCCGAGCCAGGAGGAGGGATCTGGCTGAGAAAACTGATAGGACTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR GCA 90 bp | TGGGAGGCAATCTCACAAAATCACATATGGGAGGAAGGGTGCGGCACACCACCGCGGGCCGGAATTGGCTaGTGGTGGCCTCCCACCGCA | + |
|
Preference number: 4 (lower is better) Translates to: WEAISQNHIWEEGCGTPPRAGIG*WWPPTA Trigger: TGCGGTGGGAGGCCACCAGCAGCCAATTCCGGCCCG...CGGTGGTGTGCCGCACCCTTCCTCCCATATGTGATTTTGTGAGATTGCCTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR GCA 90 bp | GGATCTTCTGCTACTCACATAAACCAGAGAGTGTTGGTTGGGGTGGGGGCCTCCAGGCTGTCATGTGCCTaGCGCGGCCCTGGCGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GSSATHINQRVLVGVGASRLSCA*RGPGAV Trigger: GACTGCGCCAGGGCCGCGGCAGGCACATGACAGCCT...GGAGGCCCCCACCCCAACCAACACTCTCTGGTTTATGTGAGTAGCAGAAGATCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR GCA 90 bp | GGTGGGGCATTGGCACGTGGGGGCAGATGGCTGGCCGGTGTGCGGTCTAGTGCCTTTAAATTGCCAGCCTaGATGGCTGCCAGAGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GGALARGGRWLAGVRSSAFKLPA*MAARVQ Trigger: TTGGACTCTGGCAGCCATGCAGGCTGGCAATTTAAA...GGCACTAGACCGCACACCGGCCAGCCATCTGCCCCCACGTGCCAATGCCCCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199157.2 |
||
| CDS-3UTR CCA 90 bp | TGGGAGGCAATCTCACAAAATCACATATGGGAGGAAGGGTGCGGCACACCACCGTCCCACACGCGGTCCTaGACCCCTGCCACTGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: WEAISQNHIWEEGCGTPPSHTRS*TPATVR Trigger: CCGCACAGTGGCAGGGGTCCAGGACCGCGTGTGGGA...CGGTGGTGTGCCGCACCCTTCCTCCCATATGTGATTTTGTGAGATTGCCTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR CAA 72 bp | CTGGAGTCGGGGCGAGGCTGGCTCGTGGCGAGGTATTaGGCTCTCATGCTGGAGGTGTACTGTCACTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LESGRGWLVARY*ALMLEVYCHSD Trigger: GTCAGAGTGACAGTACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCCCCGACTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199157.2 |
||
| CDS-3UTR TCA 90 bp | GTTGCTGGTGGCAGCGACTGTCCAGGTGAGCACCCCAGAAGCCTCACTTCACAGAGAGGGCCAGGTAGATaGGGCCCTCCACACCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: VAGGSDCPGEHPRSLTSQRGPGR*GPPHHH Trigger: ATGATGGTGTGGAGGGCCTCATCTACCTGGCCCTCT...CTGTGAAGTGAGGCTTCTGGGGTGCTCACCTGGACAGTCGCTGCCACCAGCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR GCA 90 bp | GGAGACGGAGGCAGGCAGGGTCAGGTTGCTGGTGGCAGCGACTGTCCAGGTGAGTCCGCGACAACATCTTaGATTTCCACCAGAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GDGGRQGQVAGGSDCPGESATTS*ISTRAL Trigger: CAAGGCTCTGGTGGAAATGCAAGATGTTGTCGCGGA...CTCACCTGGACAGTCGCTGCCACCAGCAACCTGACCCTGCCTGCCTCCGTCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR GCA 90 bp | TGGGCCAGGGTAGAGGCTCCAGGTCCTGATTTGGAAGCTAATTCAGCCCAGAAGGTAAAGGCTGTCATGTaGCTGCCGCGGCCCTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: WARVEAPGPDLEANSAQKVKAVM*LPRPWR Trigger: GCGCCAGGGCCGCGGCAGGCACATGACAGCCTTTAC...CTTCTGGGCTGAATTAGCTTCCAAATCAGGACCTGGAGCCTCTACCCTGGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CCA 90 bp | TGGGAGGCAATCTCACAAAATCACATATGGGAGGAAGGGTGCGGCACACCACCGGCCGGAATTGGCTGCTaGTGGCCTCCCACCGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WEAISQNHIWEEGCGTPPAGIGC*WPPTAG Trigger: ACCTGCGGTGGGAGGCCACCAGCAGCCAATTCCGGC...CGGTGGTGTGCCGCACCCTTCCTCCCATATGTGATTTTGTGAGATTGCCTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CCA 90 bp | TGGCCCCTCCCTGGCAGCACCCCACAAAGAAATGACCACTCTAGCCCTGGCTCCGATGAATGCCATCGCTaGTCTCGCCGTTGCCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: WPLPGSTPQRNDHSSPGSDECHR*SRRCRR Trigger: TCTACGGCAACGGCGAGACCAGCGATGGCATTCATC...GGAGCCAGGGCTAGAGTGGTCATTTCTTTGTGGGGTGCTGCCAGGGAGGGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CCA 90 bp | GGAGCTGAAGCCCAGGGGGTTCTGGGATCCGTAGCTGCCAGGTTGCTCCAGGAGGCTCCTCCACCATCTTaGTCACAAAGGTGTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GAEAQGVLGSVAARLLQEAPPPS*SQRCQG Trigger: ACCCTGACACCTTTGTGACCAAGATGGTGGAGGAGC...CTCCTGGAGCAACCTGGCAGCTACGGATCCCAGAACCCCCTGGGCTTCAGCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGGTCAGGACTCCCGAGACAGCACAAGTTCACAGCCACGTCCGGGCAGTTCTGCTGGAAGGGGTTaGTGGCACGGGGTGAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TEGQDSRDSTSSQPRPGSSAGRG*WHGVSK Trigger: CTTGCTCACCCCGTGCCACCAACCCCTTCCAGCAGA...ACTGCCCGGACGTGGCTGTGAACTTGTGCTGTCTCGGGAGTCCTGACCTTCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CCA 90 bp | TCCCCTGCCTGTGAATGGAGATGGGATTCTCAGGAGTGTGGCGGTAGGGCAGTAGCATTGCTGACGGTGTaGGCAGCGGCTGGGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPACEWRWDSQECGGRAVALLTV*AAAGML Trigger: CAGCATCCCAGCCGCTGCCCACACCGTCAGCAATGC...TACTGCCCTACCGCCACACTCCTGAGAATCCCATCTCCATTCACAGGCAGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR CAA 72 bp | CAGTTGGAGTCAAGGCCAGGGTCCCCTGCACTGATGTaGTCGTGCTTAGGAGCTACAGATGCCCCGACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QLESRPGSPALM*SCLGATDAPTG Trigger: CCCAGTCGGGGCATCTGTAGCTCCTAAGCACGACAACATCAGTGCAGGGGACCCTGGCCTTGACTCCAACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR CAA 72 bp | GGGCAGTGCCCGCCTCTCATGCTATATACATTCACCTaGTGGCCTGCTCACGGCCAGGGGGCAGCATTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GQCPPLMLYTFT*WPAHGQGAAFV Trigger: CACAAATGCTGCCCCCTGGCCGTGAGCAGGCCACAAGGTGAATGTATATAGCATGAGAGGCGGGCACTGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR GCA 90 bp | CCAGTCCTATCAGTTTTCTCAGCCAGATCCCTCCTCCTGGCTCGGCAAGGGATCGCCGTAGAATCCCACTaGAATGCCCGCGCTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PVLSVFSARSLLLARQGIAVESH*NARAAD Trigger: GTCTGCAGCGCGGGCATTGCAGTGGGATTCTACGGC...GATCCCTTGCCGAGCCAGGAGGAGGGATCTGGCTGAGAAAACTGATAGGACTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR GCA 90 bp | CCTCTCATGCTATATACATTCACCTTGTGGCCTGCTCACGGCCAGGGGGCAGCACTGCCCGACAGCTTCTaGTGGAAGGGGTTGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLMLYTFTLWPAHGQGAALPDSF*WKGLVA Trigger: TGCCACCAACCCCTTCCAGCAGAAGCTGTCGGGCAG...TGCTGCCCCCTGGCCGTGAGCAGGCCACAAGGTGAATGTATATAGCATGAGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR GCA 90 bp | TGGCCCCTCCCTGGCAGCACCCCACAAAGAAATGACCACTCTAGCCCTGGCTCCGGTATTTGGCTCTCATaGTGGAGGTGTATGAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: WPLPGSTPQRNDHSSPGSGIWLS*WRCMRA Trigger: CGCCCTCATACACCTCCAGCATGAGAGCCAAATACC...GGAGCCAGGGCTAGAGTGGTCATTTCTTTGTGGGGTGCTGCCAGGGAGGGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042661.8 |
||
| CDS-3UTR CCA 90 bp | CACTCTTCAGGAATGAATGGGAAAGAGGGTTTGGCACCAAGAAGGTGGCCAGCAGGTGTGGGCAGCGGCTaGGATGCTGGCTTCGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HSSGMNGKEGLAPRRWPAGVGSG*DAGFAA Trigger: GGCAGCGAAGCCAGCATCCCAGCCGCTGCCCACACC...TGCTGGCCACCTTCTTGGTGCCAAACCCTCTTTCCCATTCATTCCTGAAGAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CCA 90 bp | GGAGACGGAGGCAGGCAGGGTCAGGTTGCTGGTGGCAGCGACTGTCCAGGTGAGGGGGGTTCTGGAAATTaGCATTCTGGCTCATGTACT | + |
|
Preference number: 4 (lower is better) Translates to: GDGGRQGQVAGGSDCPGEGGSGN*HSGSCT Trigger: AGTACATGAGCCAGAATGCCAATTTCCAGAACCCCC...CTCACCTGGACAGTCGCTGCCACCAGCAACCTGACCCTGCCTGCCTCCGTCTCC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000199157.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCTGCCTGTGAATGGAGATGGGATTCTCAGGAGTGTGGCGGTAGGGCAGTAGGCGAGGCTGGCTCGTaGCGAGGTATTTGGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPACEWRWDSQECGGRAVGEAGS*RGIWLS Trigger: TGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCC...TACTGCCCTACCGCCACACTCCTGAGAATCCCATCTCCATTCACAGGCAGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042661.8 |
||
| CDS-3UTR TCA 90 bp | CCAGTCCTATCAGTTTTCTCAGCCAGATCCCTCCTCCTGGCTCGGCAAGGGATCAGTCCACCAGGGCGGTaGGGTGCTGGAGATTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: PVLSVFSARSLLLARQGISPPGR*GAGDSL Trigger: AAGTGAATCTCCAGCACCTCACCGCCCTGGTGGACT...GATCCCTTGCCGAGCCAGGAGGAGGGATCTGGCTGAGAAAACTGATAGGACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR GCA 90 bp | TCAGGAATGAATGGGAAAGAGGGTTTGGCACCAAGAAGGTGGCCAGCACTGAGAAAGTGCGGCAGCCGGTaGAGGAGGCTCACCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGMNGKEGLAPRRWPALRKCGSR*RRLTHQ Trigger: CTGGTGGGTGAGCCTCCTGCACCGGCTGCCGCACTT...TCTCAGTGCTGGCCACCTTCTTGGTGCCAAACCCTCTTTCCCATTCATTCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR GCA 90 bp | TATCAGTTTTCTCAGCCAGATCCCTCCTCCTGGCTCGGCAAGGGATCGGGCTCTCGCTGGTCTCGCCGTTaGCGTAGAATCCCACTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: YQFSQPDPSSWLGKGSGSRWSRR*RRIPLQ Trigger: TTGCAGTGGGATTCTACGGCAACGGCGAGACCAGCG...AGAGCCCGATCCCTTGCCGAGCCAGGAGGAGGGATCTGGCTGAGAAAACTGATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR GCA 90 bp | TCAAGGCCAGGGTCCCCTGCACTGATGTTGTCGTGCTTAGGAGCTACAGATGCCGGACCTCTCTTCTGCTaGCAGGTGTGTGGGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRPGSPALMLSCLGATDAGPLFC*QVCGML Trigger: CAGCATCCCACACACCTGGCAGCAGAAGAGAGGTCC...GGCATCTGTAGCTCCTAAGCACGACAACATCAGTGCAGGGGACCCTGGCCTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR GCA 90 bp | CCTCTCATGCTATATACATTCACCTTGTGGCCTGCTCACGGCCAGGGGGCAGCAGGACCTCTCTTCTGCTaGCAGGTGTGTGGGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLMLYTFTLWPAHGQGAAGPLFC*QVCGML Trigger: CAGCATCCCACACACCTGGCAGCAGAAGAGAGGTCC...TGCTGCCCCCTGGCCGTGAGCAGGCCACAAGGTGAATGTATATAGCATGAGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CCA 90 bp | GGATGCTCCAGGCCGGGATCTTCTGCTACTCACATAAACCAGAGAGTGTTGGTTTCCTCGGGCCGGAATTaGCTGCTGGTGGCCTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GCSRPGSSATHINQRVLVSSGRN*LLVASH Trigger: GTGGGAGGCCACCAGCAGCCAATTCCGGCCCGAGGA...AACCAACACTCTCTGGTTTATGTGAGTAGCAGAAGATCCCGGCCTGGAGCATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CCA 90 bp | GTTGCTGGTGGCAGCGACTGTCCAGGTGAGCACCCCAGAAGCCTCACTTCACAGTCACAGCGGGGGTTCTaGAAATTGGCATTCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VAGGSDCPGEHPRSLTSQSQRGF*KLAFWL Trigger: GAGCCAGAATGCCAATTTCCAGAACCCCCGCTGTGA...CTGTGAAGTGAGGCTTCTGGGGTGCTCACCTGGACAGTCGCTGCCACCAGCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000199157.2 |
||
| CDS-3UTR TCA 90 bp | CACTCTTCAGGAATGAATGGGAAAGAGGGTTTGGCACCAAGAAGGTGGCCAGCACCTTGGAGCTTCGGATaGGGCCCACCAGCACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HSSGMNGKEGLAPRRWPAPWSFG*GPPAPG Trigger: TCCTGGTGCTGGTGGGCCTCATCCGAAGCTCCAAGG...TGCTGGCCACCTTCTTGGTGCCAAACCCTCTTTCCCATTCATTCCTGAAGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR GCA 90 bp | GAGTGCAAGGGGCAGCATGAAGGGTCACCTGTAGAAGGAACGCAGGCAGGGTGGTCCGCGACAACATCTTaGATTTCCACCAGAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ECKGQHEGSPVEGTQAGWSATTS*ISTRAL Trigger: CAAGGCTCTGGTGGAAATGCAAGATGTTGTCGCGGA...CCACCCTGCCTGCGTTCCTTCTACAGGTGACCCTTCATGCTGCCCCTTGCACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CCA 90 bp | GAGGCAATCTCACAAAATCACATATGGGAGGAAGGGTGCGGCACACCACCGCTGCTACGCAGAAGTCGCTaGAGCCCACAGACACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EAISQNHIWEEGCGTPPLLRRSR*SPQTQP Trigger: TGGCTGTGTCTGTGGGCTCCAGCGACTTCTGCGTAG...CAGCGGTGGTGTGCCGCACCCTTCCTCCCATATGTGATTTTGTGAGATTGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CCA 90 bp | GATGGGATTCTCAGGAGTGTGGCGGTAGGGCAGTACCAGGAAAGGCTCGCTGTAAGGGCGGTGAGGTGCTaGAGATTCACTTCCGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DGILRSVAVGQYQERLAVRAVRC*RFTSVP Trigger: TGGAACGGAAGTGAATCTCCAGCACCTCACCGCCCT...TACAGCGAGCCTTTCCTGGTACTGCCCTACCGCCACACTCCTGAGAATCCCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CCA 90 bp | CCAGTCCTATCAGTTTTCTCAGCCAGATCCCTCCTCCTGGCTCGGCAAGGGATCCTCCCCATCGTCATCTaGACCTCTCTTCTGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PVLSVFSARSLLLARQGILPIVI*TSLLLP Trigger: TGGCAGCAGAAGAGAGGTCCAGATGACGATGGGGAG...GATCCCTTGCCGAGCCAGGAGGAGGGATCTGGCTGAGAAAACTGATAGGACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CCA 90 bp | GATGGGATTCTCAGGAGTGTGGCGGTAGGGCAGTACCAGGAAAGGCTCGCTGTACATGTACTCGGTGACTaGGGCATTGCTGACGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: DGILRSVAVGQYQERLAVHVLGD*GIADGV Trigger: CACACCGTCAGCAATGCCCCAGTCACCGAGTACATG...TACAGCGAGCCTTTCCTGGTACTGCCCTACCGCCACACTCCTGAGAATCCCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042661.8 |
||
| CDS-3UTR GCA 90 bp | GGATGCTCCAGGCCGGGATCTTCTGCTACTCACATAAACCAGAGAGTGTTGGTTCTGCCCGACAGCTTCTaGTGGAAGGGGTTGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GCSRPGSSATHINQRVLVLPDSF*WKGLVA Trigger: TGCCACCAACCCCTTCCAGCAGAAGCTGTCGGGCAG...AACCAACACTCTCTGGTTTATGTGAGTAGCAGAAGATCCCGGCCTGGAGCATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR GCA 90 bp | GGATGCTCCAGGCCGGGATCTTCTGCTACTCACATAAACCAGAGAGTGTTGGTTCCAGAGCCTTGTGGCTaGCCGACAGCTTCTGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GCSRPGSSATHINQRVLVPEPCG*PTASAG Trigger: TCCAGCAGAAGCTGTCGGGCAGCCACAAGGCTCTGG...AACCAACACTCTCTGGTTTATGTGAGTAGCAGAAGATCCCGGCCTGGAGCATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CCA 90 bp | ATGAAAAACAAAGAGACCCTGGTCACCTGTGGCCCACCAGCTAGCCACCTTCTGTCCTCCAAAAGGGGATaGCAGCGGTGTAGCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MKNKETLVTCGPPASHLLSSKRG*QRCSPA Trigger: TGCTGGGCTACACCGCTGCCATCCCCTTTTGGAGGA...CAGAAGGTGGCTAGCTGGTGGGCCACAGGTGACCAGGGTCTCTTTGTTTTTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| 3UTR CAA 72 bp | GCTGGCTGGGCCAGGGTAGAGGCTCCAGGTCCTGATTaGGAAGCTAATTCAGCCCAGAAGCACAGCAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: AGWARVEAPGPD*EANSAQKHSKH Trigger: ATGTTTGCTGTGCTTCTGGGCTGAATTAGCTTCCAAATCAGGACCTGGAGCCTCTACCCTGGCCCAGCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CCA 90 bp | CAGTGTCCTGCGTCGCCTATGTCCCAGACTGCCCTGGAGATGACAAGTGTGGTCGGGGGTTCTGGAAATTaGCATTCTGGCTCATGTACT | + |
|
Preference number: 4 (lower is better) Translates to: QCPASPMSQTALEMTSVVGGSGN*HSGSCT Trigger: AGTACATGAGCCAGAATGCCAATTTCCAGAACCCCC...GACCACACTTGTCATCTCCAGGGCAGTCTGGGACATAGGCGACGCAGGACACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042661.8 |
||
| CDS-3UTR CCA 90 bp | GGATCTTCTGCTACTCACATAAACCAGAGAGTGTTGGTTGGGGTGGGGGCCTCCTCACAGCGGGGGTTCTaGAAATTGGCATTCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSSATHINQRVLVGVGASSQRGF*KLAFWL Trigger: GAGCCAGAATGCCAATTTCCAGAACCCCCGCTGTGA...GGAGGCCCCCACCCCAACCAACACTCTCTGGTTTATGTGAGTAGCAGAAGATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042661.8 |
||
| CDS-3UTR CCA 90 bp | ACTGGGAGGCAATCTCACAAAATCACATATGGGAGGAAGGGTGCGGCACACCACGCTCCTCCACCATCTTaGTCACAAAGGTGTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TGRQSHKITYGRKGAAHHAPPPS*SQRCQG Trigger: ACCCTGACACCTTTGTGACCAAGATGGTGGAGGAGC...GTGGTGTGCCGCACCCTTCCTCCCATATGTGATTTTGTGAGATTGCCTCCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGATGACAAGTGTGGTCAGTGCAAAAACAAAGGGGAAGACAAAGCTGCCTCGTGGCGAGGTATTTaGCTCTCATGCTGGAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PGDDKCGQCKNKGEDKAASWRGI*LSCWRC Trigger: ACACCTCCAGCATGAGAGCCAAATACCTCGCCACGA...GGCAGCTTTGTCTTCCCCTTTGTTTTTGCACTGACCACACTTGTCATCTCCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042661.8 |
||
| CDS-3UTR CCA 90 bp | GATTTGGAAGCTAATTCAGCCCAGAAGCACAGCAAACATCACACACTAAAGCCATCCTCCAAAAGGGGATaGCAGCGGTGTAGCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DLEANSAQKHSKHHTLKPSSKRG*QRCSPA Trigger: TGCTGGGCTACACCGCTGCCATCCCCTTTTGGAGGA...TGGCTTTAGTGTGTGATGTTTGCTGTGCTTCTGGGCTGAATTAGCTTCCAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR GCA 90 bp | GATTTGGAAGCTAATTCAGCCCAGAAGCACAGCAAACATCACACACTAAAGCCACCACTCAGTACTGAGTaGTCCTCCACCATCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: DLEANSAQKHSKHHTLKPPLSTE*SSTILV Trigger: GACCAAGATGGTGGAGGAGCACTCAGTACTGAGTGG...TGGCTTTAGTGTGTGATGTTTGCTGTGCTTCTGGGCTGAATTAGCTTCCAAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS GCA 90 bp | GCCCAGCCAGCTGCCTCTCCAGGCTCTGCAGGTTGGGCTCCGCTGTaGGGTTCAGGGCGGCAGCCGTGTCCCACACGCGGTCCTGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: AQPAASPGSAGWAPL*GSGRQPCPTRGPGP Trigger: GGGTCCAGGACCGCGTGTGGGACACGGCTGCCGCCCTGAACCGCACAGCGGAGCCCAACCTGCAGAGCCTGGAGAGGCAGCTGGCTGGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS GCA 90 bp | GCCCTCAGTGGCTCCTGCCGCCCAGCCAGCTGCCTCTCCAGGCTCTaGAGGTTGGGCTCCGCTGTGCGGTTCAGGGCGGCAGCCGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ALSGSCRPASCLSRL*RLGSAVRFRAAAVS Trigger: GGACACGGCTGCCGCCCTGAACCGCACAGCGGAGCCCAACCTGCAGAGCCTGGAGAGGCAGCTGGCTGGGCGGCAGGAGCCACTGAGGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CCA 90 bp | ACGCCTGCTGGTAGTCGGCGTCCTCGGGCCGGAATTGGCTGCTGGTaGCCTCCCACCGCAGGTCGAAGTGCGGCAGCCGGTGCAGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TPAGSRRPRAGIGCW*PPTAGRSAAAGAGG Trigger: GCCTCCTGCACCGGCTGCCGCACTTCGACCTGCGGTGGGAGGCCACCAGCAGCCAATTCCGGCCCGAGGACGCCGACTACCAGCAGGCGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS GCA 90 bp | GCAGCAACGCCTGCTGGTAGTCGGCGTCCTCGGGCCGGAATTGGCTaGTGGTGGCCTCCCACCGCAGGTCGAAGTGCGGCAGCCGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: AATPAGSRRPRAGIG*WWPPTAGRSAAAGA Trigger: TGCACCGGCTGCCGCACTTCGACCTGCGGTGGGAGGCCACCAGCAGCCAATTCCGGCCCGAGGACGCCGACTACCAGCAGGCGTTGCTGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CCA 90 bp | GCAACGCCTGCTGGTAGTCGGCGTCCTCGGGCCGGAATTGGCTGCTaGTGGCCTCCCACCGCAGGTCGAAGTGCGGCAGCCGGTGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ATPAGSRRPRAGIGC*WPPTAGRSAAAGAG Trigger: TCCTGCACCGGCTGCCGCACTTCGACCTGCGGTGGGAGGCCACCAGCAGCCAATTCCGGCCCGAGGACGCCGACTACCAGCAGGCGTTGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CCA 90 bp | CGCTGCCGCTGGAGTCGGGGCGAGGCTGGCTCGTGGCGAGGTATTTaGCTCTCATGCTGGAGGTGTATGAGGGCGGTGGGGACTCGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: RCRWSRGEAGSWRGI*LSCWRCMRAVGTRA Trigger: GGCGCGAGTCCCCACCGCCCTCATACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCCCCGACTCCAGCGGCAGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042661.8 |
||
| CDS CCA 90 bp | AGAAGAGTAGGAAGAGGAGATCTAGGGCCAGGCAGGCCAGGGCGGTaGCCCCCAGCAGCAGCAACGCCTGCTGGTAGTCGGCGTCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RRVGRGDLGPGRPGR*PPAAATPAGSRRPR Trigger: CCGAGGACGCCGACTACCAGCAGGCGTTGCTGCTGCTGGGGGCCACCGCCCTGGCCTGCCTGGCCCTAGATCTCCTCTTCCTACTCTTCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CAA 90 bp | GGCCTTCTGAGGCTGGGGGCACATTCACAGCCGTCACAGGTCCAGCCCCCAAGGTCGGTGACTGGGGCATaGCTGACGGTGTGGGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: GLLRLGAHSQPSQVQPPRSVTGA*LTVWAA Trigger: CGCTGCCCACACCGTCAGCAATGCCCCAGTCACCGA...CCTTGGGGGCTGGACCTGTGACGGCTGTGAATGTGCCCCCAGCCTCAGAAGGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS GCA 90 bp | GGGCGGCAGCCGTGTCCCACACGCGGTCCTGGACCCCTGCCACTGTaGGGTTGGCATGGCGTAGTGAGTAGGTGGCTCGATGAATGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GRQPCPTRGPGPLPL*GWHGVVSRWLDECH Trigger: ATGGCATTCATCGAGCCACCTACTCACTACGCCATGCCAACCGCACAGTGGCAGGGGTCCAGGACCGCGTGTGGGACACGGCTGCCGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CAA 90 bp | AGGCAGGGTCAGGTTGCTGGTGGCAGCGACTGTCCAGGTGAGCACCCCAGAAGCTCGGTGACTGGGGCATaGCTGACGGTGTGGGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: RQGQVAGGSDCPGEHPRSSVTGA*LTVWAA Trigger: CGCTGCCCACACCGTCAGCAATGCCCCAGTCACCGA...GCTTCTGGGGTGCTCACCTGGACAGTCGCTGCCACCAGCAACCTGACCCTGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 ENSMUST00000199157.2 |
||
| CDS CCA 90 bp | CAGCCGTGTCCCACACGCGGTCCTGGACCCCTGCCACTGTGCGGTTaGCATGGCGTAGTGAGTAGGTGGCTCGATGAATGCCATCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QPCPTRGPGPLPLCG*HGVVSRWLDECHRW Trigger: CCAGCGATGGCATTCATCGAGCCACCTACTCACTACGCCATGCCAACCGCACAGTGGCAGGGGTCCAGGACCGCGTGTGGGACACGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CCA 90 bp | CCGTTCCATTTAGCACCTCCTGGACTCGGAGCAAGGGATCCTTGGTaGCGGGGTGCTCCCGGGGGACGTTCCTCAGCAGCTCCGCGACAA | + |
|
Preference number: 5 (lower is better) Translates to: PFHLAPPGLGARDPW*RGAPGGRSSAAPRQ Trigger: TTGTCGCGGAGCTGCTGAGGAACGTCCCCCGGGAGCACCCCGCCACCAAGGATCCCTTGCTCCGAGTCCAGGAGGTGCTAAATGGAACGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CCA 90 bp | CTTCCGTTCCATTTAGCACCTCCTGGACTCGGAGCAAGGGATCCTTaGTGGCGGGGTGCTCCCGGGGGACGTTCCTCAGCAGCTCCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: LPFHLAPPGLGARDP*WRGAPGGRSSAAPR Trigger: TCGCGGAGCTGCTGAGGAACGTCCCCCGGGAGCACCCCGCCACCAAGGATCCCTTGCTCCGAGTCCAGGAGGTGCTAAATGGAACGGAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS GCA 90 bp | GGGTGCTCCCGGGGGACGTTCCTCAGCAGCTCCGCGACAACATCTTaGATTTCCACCAGAGCCTTGTGGCTGCCCGACAGCTTCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GCSRGTFLSSSATTS*ISTRALWLPDSFCW Trigger: CCAGCAGAAGCTGTCGGGCAGCCACAAGGCTCTGGTGGAAATGCAAGATGTTGTCGCGGAGCTGCTGAGGAACGTCCCCCGGGAGCACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS GCA 90 bp | TTTAGCACCTCCTGGACTCGGAGCAAGGGATCCTTGGTGGCGGGGTaGTCCCGGGGGACGTTCCTCAGCAGCTCCGCGACAACATCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: FSTSWTRSKGSLVAG*SRGTFLSSSATTSC Trigger: GCAAGATGTTGTCGCGGAGCTGCTGAGGAACGTCCCCCGGGAGCACCCCGCCACCAAGGATCCCTTGCTCCGAGTCCAGGAGGTGCTAAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CCA 90 bp | GCGGTGAGGTGCTGGAGATTCACTTCCGTTCCATTTAGCACCTCCTaGACTCGGAGCAAGGGATCCTTGGTGGCGGGGTGCTCCCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: AVRCWRFTSVPFSTS*TRSKGSLVAGCSRG Trigger: CCCCCGGGAGCACCCCGCCACCAAGGATCCCTTGCTCCGAGTCCAGGAGGTGCTAAATGGAACGGAAGTGAATCTCCAGCACCTCACCGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CAA 90 bp | TGGAGATGGGATTCTCAGGAGTGTGGCGGTAGGGCAGTACCAGGAAAGGCTCGCGTCCTCGGGCCGGAATaGGCTGCTGGTGGCCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: WRWDSQECGGRAVPGKARVLGPE*AAGGLP Trigger: TGGGAGGCCACCAGCAGCCAATTCCGGCCCGAGGAC...GCGAGCCTTTCCTGGTACTGCCCTACCGCCACACTCCTGAGAATCCCATCTCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CAA 90 bp | GAAGCCAACCGCAGTGGTAGGAGCCGTCTCCTCCGCAGGGGTCAGGGCGAGAAATTCTGCTGGAAGGGGTaGGTGGCACGGGGTGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: EANRSGRSRLLRRGQGEKFCWKG*VARGEQ Trigger: TTGCTCACCCCGTGCCACCAACCCCTTCCAGCAGAA...TTTCTCGCCCTGACCCCTGCGGAGGAGACGGCTCCTACCACTGCGGTTGGCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CCA 90 bp | GGGCATGTGCACTCGGTAAAGGCTGTCATGTGCCTGCCGCGGCCCTaGCGCAGTCTCTTCCTCCCCATCGTCATCTGGACCTCTCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GHVHSVKAVMCLPRP*RSLFLPIVIWTSLL Trigger: CAGAAGAGAGGTCCAGATGACGATGGGGAGGAAGAGACTGCGCCAGGGCCGCGGCAGGCACATGACAGCCTTTACCGAGTGCACATGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CAA 90 bp | TGCTGGCATAGGAAGGGTGGGGCATTGGCACGTGGGGGCAGATGGCTGGCCGGTTGCTCCTCCACCATCTaGGTCACAAAGGTGTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: CWHRKGGALARGGRWLAGCSSTI*VTKVSG Trigger: CCCTGACACCTTTGTGACCAAGATGGTGGAGGAGCA...ACCGGCCAGCCATCTGCCCCCACGTGCCAATGCCCCACCCTTCCTATGCCAGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS GCA 90 bp | GCAGCTGTACAAACTGGGCATGTGCACTCGGTAAAGGCTGTCATGTaGCTGCCGCGGCCCTGGCGCAGTCTCTTCCTCCCCATCGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: AAVQTGHVHSVKAVM*LPRPWRSLFLPIVI Trigger: GATGACGATGGGGAGGAAGAGACTGCGCCAGGGCCGCGGCAGGCACATGACAGCCTTTACCGAGTGCACATGCCCAGTTTGTACAGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CCA 90 bp | GGTTGGCATGGCGTAGTGAGTAGGTGGCTCGATGAATGCCATCGCTaGTCTCGCCGTTGCCGTAGAATCCCACTGCAATGCCCGCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GWHGVVSRWLDECHR*SRRCRRIPLQCPRC Trigger: GCAGCGCGGGCATTGCAGTGGGATTCTACGGCAACGGCGAGACCAGCGATGGCATTCATCGAGCCACCTACTCACTACGCCATGCCAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CCA 90 bp | CCTGGACCCCTGCCACTGTGCGGTTGGCATGGCGTAGTGAGTAGGTaGCTCGATGAATGCCATCGCTGGTCTCGCCGTTGCCGTAGAATC | + |
|
Preference number: 5 (lower is better) Translates to: PGPLPLCGWHGVVSR*LDECHRWSRRCRRI Trigger: GATTCTACGGCAACGGCGAGACCAGCGATGGCATTCATCGAGCCACCTACTCACTACGCCATGCCAACCGCACAGTGGCAGGGGTCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CCA 90 bp | GGATGCTGGCTTCGCTGCCATAGCTGCTTCCGCAGCTGTACAAACTaGGCATGTGCACTCGGTAAAGGCTGTCATGTGCCTGCCGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GCWLRCHSCFRSCTN*ACALGKGCHVPAAA Trigger: GGCCGCGGCAGGCACATGACAGCCTTTACCGAGTGCACATGCCCAGTTTGTACAGCTGCGGAAGCAGCTATGGCAGCGAAGCCAGCATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 ENSMUST00000199157.2 |
||
| CDS-3UTR CAA 90 bp | GGGTCTGGCCCCTCCCTGGCAGCACCCCACAAAGAAATGACCACTCTAGCCCTGCCAACCAAGATACCCTaGGAGCTTCGGATGAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GSGPSLAAPHKEMTTLALPTKIP*ELRMRP Trigger: GGGCCTCATCCGAAGCTCCAAGGGTATCTTGGTTGG...CAGGGCTAGAGTGGTCATTTCTTTGTGGGGTGCTGCCAGGGAGGGGCCAGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CAA 90 bp | GGGTCTGGCCCCTCCCTGGCAGCACCCCACAAAGAAATGACCACTCTAGCCCTGCTCGTGGCGAGGTATTaGGCTCTCATGCTGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GSGPSLAAPHKEMTTLALLVARY*ALMLEV Trigger: CACCTCCAGCATGAGAGCCAAATACCTCGCCACGAG...CAGGGCTAGAGTGGTCATTTCTTTGTGGGGTGCTGCCAGGGAGGGGCCAGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042661.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGTCAGGTTGCTGGTGGCAGCGACTGTCCAGGTGAGCACCCCAGAAGCCTCGTCCATGGGTTTAAATaGCCAGCCTGCATGGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QGQVAGGSDCPGEHPRSLVHGFK*PACMAA Trigger: GGCAGCCATGCAGGCTGGCAATTTAAACCCATGGAC...GAGGCTTCTGGGGTGCTCACCTGGACAGTCGCTGCCACCAGCAACCTGACCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199157.2 |
||
| CDS TCA 90 bp | CCTGCACGTAGTCCAGGTGCAAGCTGCGGCAGTCCACCAGGGCGGTaGGGTGCTGGAGATTCACTTCCGTTCCATTTAGCACCTCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PARSPGASCGSPPGR*GAGDSLPFHLAPPG Trigger: TCCAGGAGGTGCTAAATGGAACGGAAGTGAATCTCCAGCACCTCACCGCCCTGGTGGACTGCCGCAGCTTGCACCTGGACTACGTGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS GCA 90 bp | GTAGTGAGTAGGTGGCTCGATGAATGCCATCGCTGGTCTCGCCGTTaGCGTAGAATCCCACTGCAATGCCCGCGCTGCAGACCAGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VVSRWLDECHRWSRR*RRIPLQCPRCRPVW Trigger: CCACACTGGTCTGCAGCGCGGGCATTGCAGTGGGATTCTACGGCAACGGCGAGACCAGCGATGGCATTCATCGAGCCACCTACTCACTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS GCA 90 bp | GCAGCTGTACAAACTGGGCATGTGCACTCGGTAAAGGCTGTCATGTaGCTGCCGCGGCCCTGGCGCAGTCTCTTCCTCCCCATCGTCATN | + |
|
Preference number: 5 (lower is better) Translates to: AAVQTGHVHSVKAVM*LPRPWRSLFLPIVX Trigger: NATGACGATGGGGAGGAAGAGACTGCGCCAGGGCCGCGGCAGGCACATGACAGCCTTTACCGAGTGCACATGCCCAGTTTGTACAGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199157.2 |
||
| CDS-3UTR CAA 90 bp | ATGAAAAACAAAGAGACCCTGGTCACCTGTGGCCCACCAGCTAGCCACCTTCTGGTCCTCGGGCCGGAATaGGCTGCTGGTGGCCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: MKNKETLVTCGPPASHLLVLGPE*AAGGLP Trigger: TGGGAGGCCACCAGCAGCCAATTCCGGCCCGAGGAC...CAGAAGGTGGCTAGCTGGTGGGCCACAGGTGACCAGGGTCTCTTTGTTTTTCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CAA 90 bp | CAGTGTCCTGCGTCGCCTATGTCCCAGACTGCCCTGGAGATGACAAGTGTGGTCTTCTGCTGGAAGGGGTaGGTGGCACGGGGTGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: QCPASPMSQTALEMTSVVFCWKG*VARGEQ Trigger: TTGCTCACCCCGTGCCACCAACCCCTTCCAGCAGAA...GACCACACTTGTCATCTCCAGGGCAGTCTGGGACATAGGCGACGCAGGACACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CAA 90 bp | GGAGCTGAAGCCCAGGGGGTTCTGGGATCCGTAGCTGCCAGGTTGCTCCAGGAGCTCCGCGACAACATCTaGCATTTCCACCAGAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GAEAQGVLGSVAARLLQELRDNI*HFHQSL Trigger: AAGGCTCTGGTGGAAATGCAAGATGTTGTCGCGGAG...CTCCTGGAGCAACCTGGCAGCTACGGATCCCAGAACCCCCTGGGCTTCAGCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS GCA 90 bp | GACCAGTGTGGTGATGATGACGCACCAGGCAGTGCAGCAGCAGTCTaGATCAAGGTGCTCGTCTGTCTTTCTCCTCCGGCAGCACAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: DQCGDDDAPGSAAAV*IKVLVCLSPPAAQP Trigger: TGGCTGTGCTGCCGGAGGAGAAAGACAGACGAGCACCTTGATGCAGACTGCTGCTGCACTGCCTGGTGCGTCATCATCACCACACTGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS GCA 90 bp | TCGATGAATGCCATCGCTGGTCTCGCCGTTGCCGTAGAATCCCACTaGAATGCCCGCGCTGCAGACCAGTGTGGTGATGATGACGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SMNAIAGLAVAVESH*NARAADQCGDDDAP Trigger: TGGTGCGTCATCATCACCACACTGGTCTGCAGCGCGGGCATTGCAGTGGGATTCTACGGCAACGGCGAGACCAGCGATGGCATTCATCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS GCA 90 bp | CCACTGTGCGGTTGGCATGGCGTAGTGAGTAGGTGGCTCGATGAATaGCATCGCTGGTCTCGCCGTTGCCGTAGAATCCCACTGCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: PLCGWHGVVSRWLDE*HRWSRRCRRIPLQC Trigger: GCATTGCAGTGGGATTCTACGGCAACGGCGAGACCAGCGATGGCATTCATCGAGCCACCTACTCACTACGCCATGCCAACCGCACAGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS GCA 90 bp | GGCGCAGTCTCTTCCTCCCCATCGTCATCTGGACCTCTCTTCTGCTaGCAGGTGTGTGGGATGCTGCAGACGATGGAGCTGAACATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GAVSSSPSSSGPLFC*QVCGMLQTMELNMR Trigger: CCTCATGTTCAGCTCCATCGTCTGCAGCATCCCACACACCTGGCAGCAGAAGAGAGGTCCAGATGACGATGGGGAGGAAGAGACTGCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS GCA 90 bp | CCTGGCGCAGTCTCTTCCTCCCCATCGTCATCTGGACCTCTCTTCTaGTGCCAGGTGTGTGGGATGCTGCAGACGATGGAGCTGAACATG | + |
|
Preference number: 5 (lower is better) Translates to: PGAVSSSPSSSGPLF*CQVCGMLQTMELNM Trigger: CATGTTCAGCTCCATCGTCTGCAGCATCCCACACACCTGGCAGCAGAAGAGAGGTCCAGATGACGATGGGGAGGAAGAGACTGCGCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CAA 90 bp | GTTTTCTCAGCCAGATCCCTCCTCCTGGCTCGGCAAGGGATCGGGCTCTGGTTTCCAACCAAGATACCCTaGGAGCTTCGGATGAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VFSARSLLLARQGIGLWFPTKIP*ELRMRP Trigger: GGGCCTCATCCGAAGCTCCAAGGGTATCTTGGTTGG...AAACCAGAGCCCGATCCCTTGCCGAGCCAGGAGGAGGGATCTGGCTGAGAAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CAA 90 bp | GGAGACGGAGGCAGGCAGGGTCAGGTTGCTGGTGGCAGCGACTGTCCAGGTGAGGCAAGCCAAGTAGTATaGCAAAATGTCCCCACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GDGGRQGQVAGGSDCPGEASQVV*QNVPTQ Trigger: CTGAGTGGGGACATTTTGCAATACTACTTGGCTTGC...CTCACCTGGACAGTCGCTGCCACCAGCAACCTGACCCTGCCTGCCTCCGTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CAA 90 bp | CAGGCCGGGATCTTCTGCTACTCACATAAACCAGAGAGTGTTGGTTGGGGTGGGATTTCCACCAGAGCCTaGTGGCTGCCCGACAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QAGIFCYSHKPESVGWGGISTRA*WLPDSF Trigger: GAAGCTGTCGGGCAGCCACAAGGCTCTGGTGGAAAT...CCCACCCCAACCAACACTCTCTGGTTTATGTGAGTAGCAGAAGATCCCGGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CAA 90 bp | TGGGCCAGGGTAGAGGCTCCAGGTCCTGATTTGGAAGCTAATTCAGCCCAGAAGATTTCCACCAGAGCCTaGTGGCTGCCCGACAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WARVEAPGPDLEANSAQKISTRA*WLPDSF Trigger: GAAGCTGTCGGGCAGCCACAAGGCTCTGGTGGAAAT...CTTCTGGGCTGAATTAGCTTCCAAATCAGGACCTGGAGCCTCTACCCTGGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CAA 90 bp | GGTAAGTGGCACCCCAGAAATCAGGAAAACGAAATGAAGCCAACCGCAGTGGTATCGGTGACTGGGGCATaGCTGACGGTGTGGGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: GKWHPRNQENEMKPTAVVSVTGA*LTVWAA Trigger: CGCTGCCCACACCGTCAGCAATGCCCCAGTCACCGA...TACCACTGCGGTTGGCTTCATTTCGTTTTCCTGATTTCTGGGGTGCCACTTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CCA 90 bp | TTCCTCCCCATCGTCATCTGGACCTCTCTTCTGCTGCCAGGTGTGTaGGATGCTGCAGACGATGGAGCTGAACATGAGGGCTGTGACAAA | + |
|
Preference number: 5 (lower is better) Translates to: FLPIVIWTSLLLPGV*DAADDGAEHEGCDK Trigger: TTTGTCACAGCCCTCATGTTCAGCTCCATCGTCTGCAGCATCCCACACACCTGGCAGCAGAAGAGAGGTCCAGATGACGATGGGGAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CAA 90 bp | CAGTCCTATCAGTTTTCTCAGCCAGATCCCTCCTCCTGGCTCGGCAAGGGATCGCTCCGCGACAACATCTaGCATTTCCACCAGAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: QSYQFSQPDPSSWLGKGSLRDNI*HFHQSL Trigger: AAGGCTCTGGTGGAAATGCAAGATGTTGTCGCGGAG...CGATCCCTTGCCGAGCCAGGAGGAGGGATCTGGCTGAGAAAACTGATAGGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CCA 90 bp | ATTGCAAAATGTCCCCACTCAGTACTGAGTGCTCCTCCACCATCTTaGTCACAAAGGTGTCAGGGTCTACGCAGAAGTCGCTGGAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: IAKCPHSVLSAPPPS*SQRCQGLRRSRWSP Trigger: TGGGCTCCAGCGACTTCTGCGTAGACCCTGACACCTTTGTGACCAAGATGGTGGAGGAGCACTCAGTACTGAGTGGGGACATTTTGCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS-3UTR CAA 90 bp | GGAGGCAATCTCACAAAATCACATATGGGAGGAAGGGTGCGGCACACCACCGCTGCAAGCCAAGTAGTATaGCAAAATGTCCCCACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GGNLTKSHMGGRVRHTTAASQVV*QNVPTQ Trigger: CTGAGTGGGGACATTTTGCAATACTACTTGGCTTGC...AGCGGTGGTGTGCCGCACCCTTCCTCCCATATGTGATTTTGTGAGATTGCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CCA 72 bp | GGTAGTCGGCGTCCTCGGGCCGGAATTGGCTGCTGGTaGCCTCCCACCGCAGGTCGAAGTGCGGCAGCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: GSRRPRAGIGCW*PPTAGRSAAAG Trigger: ACCGGCTGCCGCACTTCGACCTGCGGTGGGAGGCCACCAGCAGCCAATTCCGGCCCGAGGACGCCGACTACC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CCA 72 bp | GCTGGTAGTCGGCGTCCTCGGGCCGGAATTGGCTGCTaGTGGCCTCCCACCGCAGGTCGAAGTGCGGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: AGSRRPRAGIGC*WPPTAGRSAAA Trigger: GGCTGCCGCACTTCGACCTGCGGTGGGAGGCCACCAGCAGCCAATTCCGGCCCGAGGACGCCGACTACCAGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CAA 90 bp | CAGCAGCAGCAACGCCTGCTGGTAGTCGGCGTCCTCGGGCCGGAATaGGCTGCTGGTGGCCTCCCACCGCAGGTCGAAGTGCGGCAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: QQQQRLLVVGVLGPE*AAGGLPPQVEVRQP Trigger: CGGCTGCCGCACTTCGACCTGCGGTGGGAGGCCACCAGCAGCCAATTCCGGCCCGAGGACGCCGACTACCAGCAGGCGTTGCTGCTGCTG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CAA 90 bp | CCGCTGCCGCTGGAGTCGGGGCGAGGCTGGCTCGTGGCGAGGTATTaGGCTCTCATGCTGGAGGTGTATGAGGGCGGTGGGGACTCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: PLPLESGRGWLVARY*ALMLEVYEGGGDSR Trigger: GCGCGAGTCCCCACCGCCCTCATACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCCCCGACTCCAGCGGCAGCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042661.8 |
||
| CDS GCA 72 bp | AATTGGCTGCTGGTGGCCTCCCACCGCAGGTCGAAGTaGGGCAGCCGGTGCAGGAGGCTCACCCACCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: NWLLVASHRRSK*GSRCRRLTHQG Trigger: GCCCTGGTGGGTGAGCCTCCTGCACCGGCTGCCGCACTTCGACCTGCGGTGGGAGGCCACCAGCAGCCAATT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS GCA 72 bp | CCTGCTGGTAGTCGGCGTCCTCGGGCCGGAATTGGCTaGTGGTGGCCTCCCACCGCAGGTCGAAGTGCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PAGSRRPRAGIG*WWPPTAGRSAA Trigger: TGCCGCACTTCGACCTGCGGTGGGAGGCCACCAGCAGCCAATTCCGGCCCGAGGACGCCGACTACCAGCAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CCA 72 bp | CGGTTCAGGGCGGCAGCCGTGTCCCACACGCGGTCCTaGACCCCTGCCACTGTGCGGTTGGCATGGCGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: RFRAAAVSHTRS*TPATVRLAWRS Trigger: ACTACGCCATGCCAACCGCACAGTGGCAGGGGTCCAGGACCGCGTGTGGGACACGGCTGCCGCCCTGAACCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS GCA 72 bp | TCCTGGACTCGGAGCAAGGGATCCTTGGTGGCGGGGTaGTCCCGGGGGACGTTCCTCAGCAGCTCCGCGACA | + |
|
Preference number: 6 (lower is better) Translates to: SWTRSKGSLVAG*SRGTFLSSSAT Trigger: TGTCGCGGAGCTGCTGAGGAACGTCCCCCGGGAGCACCCCGCCACCAAGGATCCCTTGCTCCGAGTCCAGGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CAA 72 bp | CAACGCCTGCTGGTAGTCGGCGTCCTCGGGCCGGAATaGGCTGCTGGTGGCCTCCCACCGCAGGTCGAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: QRLLVVGVLGPE*AAGGLPPQVEV Trigger: CACTTCGACCTGCGGTGGGAGGCCACCAGCAGCCAATTCCGGCCCGAGGACGCCGACTACCAGCAGGCGTTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS GCA 72 bp | GGCGAGGCTGGCTCGTGGCGAGGTATTTGGCTCTCATaGTGGAGGTGTATGAGGGCGGTGGGGACTCGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: GEAGSWRGIWLS*WRCMRAVGTRA Trigger: GGCGCGAGTCCCCACCGCCCTCATACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042661.8 |
||
| CDS CCA 72 bp | GCCCGCTGCCGCTGGAGTCGGGGCGAGGCTGGCTCGTaGCGAGGTATTTGGCTCTCATGCTGGAGGTGTATG | + |
|
Preference number: 6 (lower is better) Translates to: ARCRWSRGEAGS*RGIWLSCWRCM Trigger: CATACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCCCCGACTCCAGCGGCAGCGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042661.8 |
||
| CDS GCA 72 bp | CCGTGTCCCACACGCGGTCCTGGACCCCTGCCACTGTaGGGTTGGCATGGCGTAGTGAGTAGGTGGCTCGAT | + |
|
Preference number: 6 (lower is better) Translates to: PCPTRGPGPLPL*GWHGVVSRWLD Trigger: ATCGAGCCACCTACTCACTACGCCATGCCAACCGCACAGTGGCAGGGGTCCAGGACCGCGTGTGGGACACGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CCA 72 bp | TGGAGTCGGGGCGAGGCTGGCTCGTGGCGAGGTATTTaGCTCTCATGCTGGAGGTGTATGAGGGCGGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: WSRGEAGSWRGI*LSCWRCMRAVG Trigger: CCCCACCGCCCTCATACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCCCCGACTCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042661.8 |
||
| CDS CAA 72 bp | CTGGAGTCGGGGCGAGGCTGGCTCGTGGCGAGGTATTaGGCTCTCATGCTGGAGGTGTATGAGGGCGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LESGRGWLVARY*ALMLEVYEGGG Trigger: CCCACCGCCCTCATACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCCCCGACTCCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042661.8 |
||
| CDS CAA 90 bp | ACTTCCGTTCCATTTAGCACCTCCTGGACTCGGAGCAAGGGATCCTaGGTGGCGGGGTGCTCCCGGGGGACGTTCCTCAGCAGCTCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: TSVPFSTSWTRSKGS*VAGCSRGTFLSSSA Trigger: CGCGGAGCTGCTGAGGAACGTCCCCCGGGAGCACCCCGCCACCAAGGATCCCTTGCTCCGAGTCCAGGAGGTGCTAAATGGAACGGAAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS GCA 72 bp | CAAACTGGGCATGTGCACTCGGTAAAGGCTGTCATGTaGCTGCCGCGGCCCTGGCGCAGTCTCTTCCTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: QTGHVHSVKAVM*LPRPWRSLFLP Trigger: GGGGAGGAAGAGACTGCGCCAGGGCCGCGGCAGGCACATGACAGCCTTTACCGAGTGCACATGCCCAGTTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 ENSMUST00000199157.2 |
||
| CDS CCA 72 bp | CCCACACGCGGTCCTGGACCCCTGCCACTGTGCGGTTaGCATGGCGTAGTGAGTAGGTGGCTCGATGAATGC | + |
|
Preference number: 6 (lower is better) Translates to: PTRGPGPLPLCG*HGVVSRWLDEC Trigger: GCATTCATCGAGCCACCTACTCACTACGCCATGCCAACCGCACAGTGGCAGGGGTCCAGGACCGCGTGTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CCA 72 bp | CATTTAGCACCTCCTGGACTCGGAGCAAGGGATCCTTaGTGGCGGGGTGCTCCCGGGGGACGTTCCTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: HLAPPGLGARDP*WRGAPGGRSSA Trigger: TGCTGAGGAACGTCCCCCGGGAGCACCCCGCCACCAAGGATCCCTTGCTCCGAGTCCAGGAGGTGCTAAATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CAA 90 bp | GGGGTGCTCCCGGGGGACGTTCCTCAGCAGCTCCGCGACAACATCTaGCATTTCCACCAGAGCCTTGTGGCTGCCCGACAGCTTCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GVLPGDVPQQLRDNI*HFHQSLVAARQLLL Trigger: CAGCAGAAGCTGTCGGGCAGCCACAAGGCTCTGGTGGAAATGCAAGATGTTGTCGCGGAGCTGCTGAGGAACGTCCCCCGGGAGCACCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS GCA 72 bp | CGGGGGACGTTCCTCAGCAGCTCCGCGACAACATCTTaGATTTCCACCAGAGCCTTGTGGCTGCCCGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: RGTFLSSSATTS*ISTRALWLPDS Trigger: GCTGTCGGGCAGCCACAAGGCTCTGGTGGAAATGCAAGATGTTGTCGCGGAGCTGCTGAGGAACGTCCCCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS GCA 72 bp | ACGCACCAGGCAGTGCAGCAGCAGTCTGCATCAAGGTaGTCGTCTGTCTTTCTCCTCCGGCAGCACAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: THQAVQQQSASR*SSVFLLRQHSQ Trigger: CTGGCTGTGCTGCCGGAGGAGAAAGACAGACGAGCACCTTGATGCAGACTGCTGCTGCACTGCCTGGTGCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS GCA 72 bp | GCCATCGCTGGTCTCGCCGTTGCCGTAGAATCCCACTaGAATGCCCGCGCTGCAGACCAGTGTGGTGATGAT | + |
|
Preference number: 6 (lower is better) Translates to: AIAGLAVAVESH*NARAADQCGDD Trigger: ATCATCACCACACTGGTCTGCAGCGCGGGCATTGCAGTGGGATTCTACGGCAACGGCGAGACCAGCGATGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS GCA 72 bp | AGGTGGCTCGATGAATGCCATCGCTGGTCTCGCCGTTaGCGTAGAATCCCACTGCAATGCCCGCGCTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RWLDECHRWSRR*RRIPLQCPRCR Trigger: TCTGCAGCGCGGGCATTGCAGTGGGATTCTACGGCAACGGCGAGACCAGCGATGGCATTCATCGAGCCACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CCA 72 bp | CTGCCACTGTGCGGTTGGCATGGCGTAGTGAGTAGGTaGCTCGATGAATGCCATCGCTGGTCTCGCCGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LPLCGWHGVVSR*LDECHRWSRRC Trigger: GCAACGGCGAGACCAGCGATGGCATTCATCGAGCCACCTACTCACTACGCCATGCCAACCGCACAGTGGCAG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CAA 90 bp | TTCCTCAGCAGCTCCGCGACAACATCTTGCATTTCCACCAGAGCCTaGTGGCTGCCCGACAGCTTCTGCTGGAAGGGGTTGGTGGCACGG | + |
|
Preference number: 6 (lower is better) Translates to: FLSSSATTSCISTRA*WLPDSFCWKGLVAR Trigger: CCGTGCCACCAACCCCTTCCAGCAGAAGCTGTCGGGCAGCCACAAGGCTCTGGTGGAAATGCAAGATGTTGTCGCGGAGCTGCTGAGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CCA 72 bp | TGCAAGCTGCGGCAGTCCACCAGGGCGGTGAGGTGCTaGAGATTCACTTCCGTTCCATTTAGCACCTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CKLRQSTRAVRC*RFTSVPFSTSW Trigger: CCAGGAGGTGCTAAATGGAACGGAAGTGAATCTCCAGCACCTCACCGCCCTGGTGGACTGCCGCAGCTTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS TCA 72 bp | AGTCCAGGTGCAAGCTGCGGCAGTCCACCAGGGCGGTaGGGTGCTGGAGATTCACTTCCGTTCCATTTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SPGASCGSPPGR*GAGDSLPFHLA Trigger: TGCTAAATGGAACGGAAGTGAATCTCCAGCACCTCACCGCCCTGGTGGACTGCCGCAGCTTGCACCTGGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS GCA 72 bp | GGTGATGATGACGCACCAGGCAGTGCAGCAGCAGTCTaGATCAAGGTGCTCGTCTGTCTTTCTCCTCCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GDDDAPGSAAAV*IKVLVCLSPPA Trigger: TGCCGGAGGAGAAAGACAGACGAGCACCTTGATGCAGACTGCTGCTGCACTGCCTGGTGCGTCATCATCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS GCA 72 bp | GGTTGGCATGGCGTAGTGAGTAGGTGGCTCGATGAATaGCATCGCTGGTCTCGCCGTTGCCGTAGAATCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GWHGVVSRWLDE*HRWSRRCRRIP Trigger: TGGGATTCTACGGCAACGGCGAGACCAGCGATGGCATTCATCGAGCCACCTACTCACTACGCCATGCCAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS GCA 72 bp | CGACAACATCTTGCATTTCCACCAGAGCCTTGTGGCTaGCCGACAGCTTCTGCTGGAAGGGGTTGGTGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RQHLAFPPEPCG*PTASAGRGWWH Trigger: GTGCCACCAACCCCTTCCAGCAGAAGCTGTCGGGCAGCCACAAGGCTCTGGTGGAAATGCAAGATGTTGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS GCA 72 bp | TCTTCCTCCCCATCGTCATCTGGACCTCTCTTCTGCTaGCAGGTGTGTGGGATGCTGCAGACGATGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSSPSSSGPLFC*QVCGMLQTMEL Trigger: CAGCTCCATCGTCTGCAGCATCCCACACACCTGGCAGCAGAAGAGAGGTCCAGATGACGATGGGGAGGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS GCA 72 bp | GTCTCTTCCTCCCCATCGTCATCTGGACCTCTCTTCTaGTGCCAGGTGTGTGGGATGCTGCAGACGATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VSSSPSSSGPLF*CQVCGMLQTME Trigger: CTCCATCGTCTGCAGCATCCCACACACCTGGCAGCAGAAGAGAGGTCCAGATGACGATGGGGAGGAAGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CCA 72 bp | GGCGTAGTGAGTAGGTGGCTCGATGAATGCCATCGCTaGTCTCGCCGTTGCCGTAGAATCCCACTGCAATGC | + |
|
Preference number: 6 (lower is better) Translates to: GVVSRWLDECHR*SRRCRRIPLQC Trigger: GCATTGCAGTGGGATTCTACGGCAACGGCGAGACCAGCGATGGCATTCATCGAGCCACCTACTCACTACGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CCA 72 bp | TCCGCGACAACATCTTGCATTTCCACCAGAGCCTTGTaGCTGCCCGACAGCTTCTGCTGGAAGGGGTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SATTSCISTRAL*LPDSFCWKGLV Trigger: CACCAACCCCTTCCAGCAGAAGCTGTCGGGCAGCCACAAGGCTCTGGTGGAAATGCAAGATGTTGTCGCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CCA 72 bp | TGCTGGAGATTCACTTCCGTTCCATTTAGCACCTCCTaGACTCGGAGCAAGGGATCCTTGGTGGCGGGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: CWRFTSVPFSTS*TRSKGSLVAGC Trigger: GCACCCCGCCACCAAGGATCCCTTGCTCCGAGTCCAGGAGGTGCTAAATGGAACGGAAGTGAATCTCCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CCA 72 bp | CTGGAAATTGGCATTCTGGCTCATGTACTCGGTGACTaGGGCATTGCTGACGGTGTGGGCAGCGGCTGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LEIGILAHVLGD*GIADGVGSGWD Trigger: ATCCCAGCCGCTGCCCACACCGTCAGCAATGCCCCAGTCACCGAGTACATGAGCCAGAATGCCAATTTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000199157.2 |
||
| CDS CAA 72 bp | AGCTCCGCGACAACATCTTGCATTTCCACCAGAGCCTaGTGGCTGCCCGACAGCTTCTGCTGGAAGGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSATTSCISTRA*WLPDSFCWKGL Trigger: CAACCCCTTCCAGCAGAAGCTGTCGGGCAGCCACAAGGCTCTGGTGGAAATGCAAGATGTTGTCGCGGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CCA 72 bp | TGTGGCTGCCCGACAGCTTCTGCTGGAAGGGGTTGGTaGCACGGGGTGAGCAAGCCAAGTAGTATTGCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: CGCPTASAGRGW*HGVSKPSSIAK Trigger: TTTTGCAATACTACTTGGCTTGCTCACCCCGTGCCACCAACCCCTTCCAGCAGAAGCTGTCGGGCAGCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CCA 72 bp | TGTCCCCACTCAGTACTGAGTGCTCCTCCACCATCTTaGTCACAAAGGTGTCAGGGTCTACGCAGAAGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: CPHSVLSAPPPS*SQRCQGLRRSR Trigger: GCGACTTCTGCGTAGACCCTGACACCTTTGTGACCAAGATGGTGGAGGAGCACTCAGTACTGAGTGGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CCA 72 bp | CTTCGCTGCCATAGCTGCTTCCGCAGCTGTACAAACTaGGCATGTGCACTCGGTAAAGGCTGTCATGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LRCHSCFRSCTN*ACALGKGCHVP Trigger: AGGCACATGACAGCCTTTACCGAGTGCACATGCCCAGTTTGTACAGCTGCGGAAGCAGCTATGGCAGCGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 ENSMUST00000199157.2 |
||
| CDS CCA 72 bp | GTGTTCTCACAGCGGGGGTTCTGGAAATTGGCATTCTaGCTCATGTACTCGGTGACTGGGGCATTGCTGACG | + |
|
Preference number: 6 (lower is better) Translates to: VFSQRGFWKLAF*LMYSVTGALLT Trigger: CGTCAGCAATGCCCCAGTCACCGAGTACATGAGCCAGAATGCCAATTTCCAGAACCCCCGCTGTGAGAACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000199157.2 |
||
| CDS CAA 72 bp | ATGTCCCCACTCAGTACTGAGTGCTCCTCCACCATCTaGGTCACAAAGGTGTCAGGGTCTACGCAGAAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: MSPLSTECSSTI*VTKVSGSTQKS Trigger: CGACTTCTGCGTAGACCCTGACACCTTTGTGACCAAGATGGTGGAGGAGCACTCAGTACTGAGTGGGGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS CAA 90 bp | TATTGCAAAATGTCCCCACTCAGTACTGAGTGCTCCTCCACCATCTaGGTCACAAAGGTGTCAGGGTCTACGCAGAAGTCGCTGGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: YCKMSPLSTECSSTI*VTKVSGSTQKSLEP Trigger: GGGCTCCAGCGACTTCTGCGTAGACCCTGACACCTTTGTGACCAAGATGGTGGAGGAGCACTCAGTACTGAGTGGGGACATTTTGCAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||
| CDS TCA 72 bp | AGCCAAGTAGTATTGCAAAATGTCCCCACTCAGTACTaGGTGCTCCTCCACCATCTTGGTCACAAAGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SQVVLQNVPTQY*VLLHHLGHKGV Trigger: GACACCTTTGTGACCAAGATGGTGGAGGAGCACTCAGTACTGAGTGGGGACATTTTGCAATACTACTTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042661.8 ENSMUST00000197452.5 |
||