Pregenerated sensors for TTYH2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034714Ensembl transcript IDs: ENSMUST00000045779.6
Found 181 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACTTAAGGTGGGCTGAAGCGGGCAGCTGCCTCAGGGACAACAGCTaGGTCCTGGGGGAGTTAAGGCCGGAGAGGCTGGTCCAGTCACAG | + |
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Preference number: 1 (lower is better) Translates to: DLRWAEAGSCLRDNS*VLGELRPERLVQSQ Trigger: CTGTGACTGGACCAGCCTCTCCGGCCTTAACTCCCCCAGGACTCAGCTGTTGTCCCTGAGGCAGCTGCCCGCTTCAGCCCACCTTAAGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR GCA 90 bp | GGTTGGCTGGTGGAGGTTAGAGAATTGTGCCCATGGCTGCCAGGCTaGAGTGCCCAGCTTGAAGCCACCCATCCCCTCTGGGGAGATCTC | + |
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Preference number: 1 (lower is better) Translates to: GWLVEVRELCPWLPG*SAQLEATHPLWGDL Trigger: GAGATCTCCCCAGAGGGGATGGGTGGCTTCAAGCTGGGCACTGCAGCCTGGCAGCCATGGGCACAATTCTCTAACCTCCACCAGCCAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR GCA 90 bp | CAGAATGGGGTTGGCTGGTGGAGGTTAGAGAATTGTGCCCATGGCTaGCAGGCTGCAGTGCCCAGCTTGAAGCCACCCATCCCCTCTGGG | + |
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Preference number: 1 (lower is better) Translates to: QNGVGWWRLENCAHG*QAAVPSLKPPIPSG Trigger: CCCAGAGGGGATGGGTGGCTTCAAGCTGGGCACTGCAGCCTGGCAGCCATGGGCACAATTCTCTAACCTCCACCAGCCAACCCCATTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR CCA 90 bp | TCCCCACCTGCAGCTGACACCTGGTTCCAGAATGGGGTTGGCTGGTaGAGGTTAGAGAATTGTGCCCATGGCTGCCAGGCTGCAGTGCCC | + |
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Preference number: 1 (lower is better) Translates to: SPPAADTWFQNGVGW*RLENCAHGCQAAVP Trigger: GGGCACTGCAGCCTGGCAGCCATGGGCACAATTCTCTAACCTCCACCAGCCAACCCCATTCTGGAACCAGGTGTCAGCTGCAGGTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR CCA 90 bp | CTGTCCCCACCTGCAGCTGACACCTGGTTCCAGAATGGGGTTGGCTaGTGGAGGTTAGAGAATTGTGCCCATGGCTGCCAGGCTGCAGTG | + |
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Preference number: 1 (lower is better) Translates to: LSPPAADTWFQNGVG*WRLENCAHGCQAAV Trigger: CACTGCAGCCTGGCAGCCATGGGCACAATTCTCTAACCTCCACCAGCCAACCCCATTCTGGAACCAGGTGTCAGCTGCAGGTGGGGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR CCA 90 bp | GCCACGGGGCTTCGGTGTGTAGTGTACTCTGGGTTGGTCAGAGGTTaGAAGCACCAAAGACCCCTAACCTGTCCCTTGGCAGGCAGGACA | + |
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Preference number: 1 (lower is better) Translates to: ATGLRCVVYSGLVRG*KHQRPLTCPLAGRT Trigger: TGTCCTGCCTGCCAAGGGACAGGTTAGGGGTCTTTGGTGCTTCCAACCTCTGACCAACCCAGAGTACACTACACACCGAAGCCCCGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR CCA 90 bp | CGCTTGGCTGCACAAGGCCACGGGGCTTCGGTGTGTAGTGTACTCTaGGTTGGTCAGAGGTTGGAAGCACCAAAGACCCCTAACCTGTCC | + |
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Preference number: 1 (lower is better) Translates to: RLAAQGHGASVCSVL*VGQRLEAPKTPNLS Trigger: GGACAGGTTAGGGGTCTTTGGTGCTTCCAACCTCTGACCAACCCAGAGTACACTACACACCGAAGCCCCGTGGCCTTGTGCAGCCAAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR GCA 90 bp | CTCACGTCCACCTGTGGCTTTGGTCAGGAGTCCCAGCTGTGTCTCTaGAGCCACAGGAGCCTGTTCGTGTCCAGGAACCTTCGGTTTCTA | + |
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Preference number: 1 (lower is better) Translates to: LTSTCGFGQESQLCL*SHRSLFVSRNLRFL Trigger: TAGAAACCGAAGGTTCCTGGACACGAACAGGCTCCTGTGGCTGCAGAGACACAGCTGGGACTCCTGACCAAAGCCACAGGTGGACGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR TCA 90 bp | TCAATTACCATTTTTCATCTGCTGAGGGTGGGACTTAAGGTGGGCTaGAGCGGGCAGCTGCCTCAGGGACAACAGCTGAGTCCTGGGGGA | + |
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Preference number: 1 (lower is better) Translates to: SITIFHLLRVGLKVG*SGQLPQGQQLSPGG Trigger: TCCCCCAGGACTCAGCTGTTGTCCCTGAGGCAGCTGCCCGCTTCAGCCCACCTTAAGTCCCACCCTCAGCAGATGAAAAATGGTAATTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR TCA 90 bp | AGCAAATCTGCTCCTGGCCTGGTGTGGTGTGGTAGCACACGCCTTTaGGCCCAGTACTCTGCAGACAGAGGCAGGCAGATCTCTATGAGT | + |
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Preference number: 1 (lower is better) Translates to: SKSAPGLVWCGSTRL*AQYSADRGRQISMS Trigger: ACTCATAGAGATCTGCCTGCCTCTGTCTGCAGAGTACTGGGCTCAAAGGCGTGTGCTACCACACCACACCAGGCCAGGAGCAGATTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR TCA 90 bp | ACACTGGGAACCTGTTCAGGTGCTTTCAAAGTGTCTGTTCATACCTaGGACTGTCCCCACCTGCAGCTGACACCTGGTTCCAGAATGGGG | + |
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Preference number: 1 (lower is better) Translates to: TLGTCSGAFKVSVHT*DCPHLQLTPGSRMG Trigger: CCCCATTCTGGAACCAGGTGTCAGCTGCAGGTGGGGACAGTCTCAGGTATGAACAGACACTTTGAAAGCACCTGAACAGGTTCCCAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR TCA 90 bp | AAAAAGTCCTTCAGCTGCTGCAGAGGAGACATCAGGAGCAAGGCCTaGGGTCAAAGCTCCGAGTCTGCACAGGACACAGGCATACAAAGG | + |
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Preference number: 1 (lower is better) Translates to: KKSFSCCRGDIRSKA*GQSSESAQDTGIQR Trigger: CCTTTGTATGCCTGTGTCCTGTGCAGACTCGGAGCTTTGACCTCAGGCCTTGCTCCTGATGTCTCCTCTGCAGCAGCTGAAGGACTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR CCA 90 bp | CTAACCTGTCCCTTGGCAGGCAGGACAGGGGTTATTATTTTCTCCTaGCCAGAAGTGGCTGTTCCTCAGAATGAAGTCCCTCGGCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: LTCPLAGRTGVIIFS*PEVAVPQNEVPRPS Trigger: AGAAGGCCGAGGGACTTCATTCTGAGGAACAGCCACTTCTGGCCAGGAGAAAATAATAACCCCTGTCCTGCCTGCCAAGGGACAGGTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR TCA 90 bp | CTTTCAAAGTGTCTGTTCATACCTGAGACTGTCCCCACCTGCAGCTaGCACCTGGTTCCAGAATGGGGTTGGCTGGTGGAGGTTAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: LSKCLFIPETVPTCS*HLVPEWGWLVEVRE Trigger: TTCTCTAACCTCCACCAGCCAACCCCATTCTGGAACCAGGTGTCAGCTGCAGGTGGGGACAGTCTCAGGTATGAACAGACACTTTGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR GCA 90 bp | CAGGTTAATATGAGACACAGTGACGCCGGTGGCTTGGCTGGGAGCTaGCAGTACAATGACAATGTGGCTCTTCTGAAATGGACACATCCC | + |
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Preference number: 1 (lower is better) Translates to: QVNMRHSDAGGLAGS*QYNDNVALLKWTHP Trigger: GGGATGTGTCCATTTCAGAAGAGCCACATTGTCATTGTACTGGCAGCTCCCAGCCAAGCCACCGGCGTCACTGTGTCTCATATTAACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR CCA 90 bp | CCTTGGCAGGCAGGACAGGGGTTATTATTTTCTCCTGGCCAGAAGTaGCTGTTCCTCAGAATGAAGTCCCTCGGCCTTCTTAGCTATCAT | + |
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Preference number: 1 (lower is better) Translates to: PWQAGQGLLFSPGQK*LFLRMKSLGLLSYH Trigger: ATGATAGCTAAGAAGGCCGAGGGACTTCATTCTGAGGAACAGCCACTTCTGGCCAGGAGAAAATAATAACCCCTGTCCTGCCTGCCAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR TCA 90 bp | AGGGGTTATTATTTTCTCCTGGCCAGAAGTGGCTGTTCCTCAGAATaGAGTCCCTCGGCCTTCTTAGCTATCATGTCTTTCCCTTTACAA | + |
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Preference number: 1 (lower is better) Translates to: RGYYFLLARSGCSSE*SPSAFLAIMSFPLQ Trigger: TTGTAAAGGGAAAGACATGATAGCTAAGAAGGCCGAGGGACTTCATTCTGAGGAACAGCCACTTCTGGCCAGGAGAAAATAATAACCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR CAA 90 bp | GGCCACGGGGCTTCGGTGTGTAGTGTACTCTGGGTTGGTCAGAGGTaGGAAGCACCAAAGACCCCTAACCTGTCCCTTGGCAGGCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: GHGASVCSVLWVGQR*EAPKTPNLSLGRQD Trigger: GTCCTGCCTGCCAAGGGACAGGTTAGGGGTCTTTGGTGCTTCCAACCTCTGACCAACCCAGAGTACACTACACACCGAAGCCCCGTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR-3UTR TCA 90 bp | AGACATCAGGAGCAAGGCCTGAGGTCAAAGCTCCGAGTCTGCACAGGACACAGGGGACTTAAGGTGGGCTaGAGCGGGCAGCTGCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: RHQEQGLRSKLRVCTGHRGLKVG*SGQLPQ Trigger: CTGAGGCAGCTGCCCGCTTCAGCCCACCTTAAGTCC...CCTGTGTCCTGTGCAGACTCGGAGCTTTGACCTCAGGCCTTGCTCCTGATGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR-3UTR GCA 90 bp | GGCCTCGCTTGGCTGCACAAGGCCACGGGGCTTCGGTGTGTAGTGTACTCTGGGTTGAGCCCAGTACTCTaGAGACAGAGGCAGGCAGAT | + |
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Preference number: 2 (lower is better) Translates to: GLAWLHKATGLRCVVYSGLSPVL*RQRQAD Trigger: ATCTGCCTGCCTCTGTCTGCAGAGTACTGGGCTCAA...CCCAGAGTACACTACACACCGAAGCCCCGTGGCCTTGTGCAGCCAAGCGAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR CAA 90 bp | TGCAGTGCCCAGCTTGAAGCCACCCATCCCCTCTGGGGAGATCTCTaGATGCTGTCCTTCTGGCATCTAGGCAGAGTCCCTGTGGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: CSAQLEATHPLWGDL*MLSFWHLGRVPVVP Trigger: TGGGACCACAGGGACTCTGCCTAGATGCCAGAAGGACAGCATCAAGAGATCTCCCCAGAGGGGATGGGTGGCTTCAAGCTGGGCACTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR-3UTR CCA 90 bp | GGCCTCGCTTGGCTGCACAAGGCCACGGGGCTTCGGTGTGTAGTGTACTCTGGGAATGGGGTTGGCTGGTaGAGGTTAGAGAATTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: GLAWLHKATGLRCVVYSGNGVGW*RLENCA Trigger: GGCACAATTCTCTAACCTCCACCAGCCAACCCCATT...CCCAGAGTACACTACACACCGAAGCCCCGTGGCCTTGTGCAGCCAAGCGAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR-3UTR CCA 90 bp | GGCCTCGCTTGGCTGCACAAGGCCACGGGGCTTCGGTGTGTAGTGTACTCTGGGCAAAAGACCAGGATGTaGCATCATGGCGCACCCTTT | + |
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Preference number: 2 (lower is better) Translates to: GLAWLHKATGLRCVVYSGQKTRM*HHGAPF Trigger: AAAGGGTGCGCCATGATGCCACATCCTGGTCTTTTG...CCCAGAGTACACTACACACCGAAGCCCCGTGGCCTTGTGCAGCCAAGCGAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR CAA 90 bp | TGGCTGCACAAGGCCACGGGGCTTCGGTGTGTAGTGTACTCTGGGTaGGTCAGAGGTTGGAAGCACCAAAGACCCCTAACCTGTCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: WLHKATGLRCVVYSG*VRGWKHQRPLTCPL Trigger: CAAGGGACAGGTTAGGGGTCTTTGGTGCTTCCAACCTCTGACCAACCCAGAGTACACTACACACCGAAGCCCCGTGGCCTTGTGCAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR-3UTR TCA 90 bp | CAGATCTCTATGAGTTCTAGGCCAGGGCCAGTCAGGGTATATAAGGAGACCGCACTGCAGTGCCCAGCTTaGAGCCACCCATCCCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: QISMSSRPGPVRVYKETALQCPA*SHPSPL Trigger: CAGAGGGGATGGGTGGCTTCAAGCTGGGCACTGCAG...TGCGGTCTCCTTATATACCCTGACTGGCCCTGGCCTAGAACTCATAGAGATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR-3UTR GCA 90 bp | TCTAGGCCAGGGCCAGTCAGGGTATATAAGGAGACCGCAGCAAAACAAAACCCCAATTGTGCCCATGGCTaGCAGGCTGCAGTGCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: SRPGPVRVYKETAAKQNPNCAHG*QAAVPS Trigger: GCTGGGCACTGCAGCCTGGCAGCCATGGGCACAATT...GGGGTTTTGTTTTGCTGCGGTCTCCTTATATACCCTGACTGGCCCTGGCCTAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR-3UTR TCA 90 bp | GGGCTTCGGTGTGTAGTGTACTCTGGGTTGGTCAGAGGTTGGAAGCACCAAAGAGGTAGCACACGCCTTTaGGCCCAGTACTCTGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: GLRCVVYSGLVRGWKHQRGSTRL*AQYSAD Trigger: GTCTGCAGAGTACTGGGCTCAAAGGCGTGTGCTACC...TCTTTGGTGCTTCCAACCTCTGACCAACCCAGAGTACACTACACACCGAAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR-3UTR CCA 90 bp | CAGGAGCAAGGCCTGAGGTCAAAGCTCCGAGTCTGCACAGGACACAGGCATACAAAAGGGCTCTCAGGCTaGTGGTCCCCTCCTCAATTA | + |
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Preference number: 2 (lower is better) Translates to: QEQGLRSKLRVCTGHRHTKGLSG*WSPPQL Trigger: TAATTGAGGAGGGGACCACCAGCCTGAGAGCCCTTT...TGTATGCCTGTGTCCTGTGCAGACTCGGAGCTTTGACCTCAGGCCTTGCTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR-3UTR CCA 90 bp | GGGAGATCTCTTGATGCTGTCCTTCTGGCATCTAGGCAGAGTCCCTGTGGTCCCCAAGGACCAAGTAACTaGAGGGTGTGGCCTGGACTT | + |
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Preference number: 2 (lower is better) Translates to: GRSLDAVLLASRQSPCGPQGPSN*RVWPGL Trigger: AAGTCCAGGCCACACCCTCCAGTTACTTGGTCCTTG...GGGACCACAGGGACTCTGCCTAGATGCCAGAAGGACAGCATCAAGAGATCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR-3UTR TCA 90 bp | CAGATCTCTATGAGTTCTAGGCCAGGGCCAGTCAGGGTATATAAGGAGACCGCACTCAGGGACAACAGCTaGGTCCTGGGGGAGTTAAGG | + |
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Preference number: 2 (lower is better) Translates to: QISMSSRPGPVRVYKETALRDNS*VLGELR Trigger: CCTTAACTCCCCCAGGACTCAGCTGTTGTCCCTGAG...TGCGGTCTCCTTATATACCCTGACTGGCCCTGGCCTAGAACTCATAGAGATCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR-3UTR TCA 90 bp | CCCCTCTGGGGAGATCTCTTGATGCTGTCCTTCTGGCATCTAGGCAGAGTCCCTCCATTTTTCATCTGCTaGGGGTGGGACTTAAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: PLWGDLLMLSFWHLGRVPPFFIC*GWDLRW Trigger: CCACCTTAAGTCCCACCCTCAGCAGATGAAAAATGG...AGGGACTCTGCCTAGATGCCAGAAGGACAGCATCAAGAGATCTCCCCAGAGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR-3UTR GCA 90 bp | AATGACAATGTGGCTCTTCTGAAATGGACACATCCCTGTCCCGCACCATCAGTACCATGGCTGCCAGGCTaGAGTGCCCAGCTTGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: NDNVALLKWTHPCPAPSVPWLPG*SAQLEA Trigger: GGCTTCAAGCTGGGCACTGCAGCCTGGCAGCCATGG...TACTGATGGTGCGGGACAGGGATGTGTCCATTTCAGAAGAGCCACATTGTCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR-3UTR CCA 90 bp | CAGATCTCTATGAGTTCTAGGCCAGGGCCAGTCAGGGTATATAAGGAGACCGCAAGAGAATTGTGCCCATaGCTGCCAGGCTGCAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: QISMSSRPGPVRVYKETARELCP*LPGCSA Trigger: GGCACTGCAGCCTGGCAGCCATGGGCACAATTCTCT...TGCGGTCTCCTTATATACCCTGACTGGCCCTGGCCTAGAACTCATAGAGATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR-3UTR CCA 90 bp | AAAAATCAAAGCAAATCTGCTCCTGGCCTGGTGTGGTGTGGTAGCACACGCCTTGGGCTCTCAGGCTGGTaGTCCCCTCCTCAATTACCA | + |
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Preference number: 2 (lower is better) Translates to: KNQSKSAPGLVWCGSTRLGLSGW*SPPQLP Trigger: TGGTAATTGAGGAGGGGACCACCAGCCTGAGAGCCC...AAGGCGTGTGCTACCACACCACACCAGGCCAGGAGCAGATTTGCTTTGATTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR-3UTR CCA 90 bp | AGTCCCTCGGCCTTCTTAGCTATCATGTCTTTCCCTTTACAAGGCTCCAGATGTGTCCACCTGTGGCTTTaGTCAGGAGTCCCAGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: SPSAFLAIMSFPLQGSRCVHLWL*SGVPAV Trigger: CACAGCTGGGACTCCTGACCAAAGCCACAGGTGGAC...ACATCTGGAGCCTTGTAAAGGGAAAGACATGATAGCTAAGAAGGCCGAGGGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR-3UTR CCA 90 bp | CGGTGTGTAGTGTACTCTGGGTTGGTCAGAGGTTGGAAGCACCAAAGACCCCTATTGATGCTGTCCTTCTaGCATCTAGGCAGAGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: RCVVYSGLVRGWKHQRPLLMLSF*HLGRVP Trigger: AGGGACTCTGCCTAGATGCCAGAAGGACAGCATCAA...TAGGGGTCTTTGGTGCTTCCAACCTCTGACCAACCCAGAGTACACTACACACCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR CAA 90 bp | GAGTCTATTGCAAGTATTGGCCGTGCCTGCGGGAGGCGTGAGTCTTaGGATCATCAACCTGTTTTAAAACACTGGGAACCTGTTCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: ESIASIGRACGRRES*DHQPVLKHWEPVQV Trigger: CACCTGAACAGGTTCCCAGTGTTTTAAAACAGGTTGATGATCCAAAGACTCACGCCTCCCGCAGGCACGGCCAATACTTGCAATAGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR-3UTR TCA 90 bp | AATGACAATGTGGCTCTTCTGAAATGGACACATCCCTGTCCCGCACCATCAGTATCTGGGGAGATCTCTTaGTGCTGTCCTTCTGGCATC | + |
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Preference number: 2 (lower is better) Translates to: NDNVALLKWTHPCPAPSVSGEIS*CCPSGI Trigger: GATGCCAGAAGGACAGCATCAAGAGATCTCCCCAGA...TACTGATGGTGCGGGACAGGGATGTGTCCATTTCAGAAGAGCCACATTGTCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR-3UTR TCA 90 bp | GGGCTTCGGTGTGTAGTGTACTCTGGGTTGGTCAGAGGTTGGAAGCACCAAAGAGTCTGGTCTATAGAATaGGTTCAAGGACAAGCTAGG | + |
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Preference number: 2 (lower is better) Translates to: GLRCVVYSGLVRGWKHQRVWSIE*VQGQAR Trigger: CCTAGCTTGTCCTTGAACTCATTCTATAGACCAGAC...TCTTTGGTGCTTCCAACCTCTGACCAACCCAGAGTACACTACACACCGAAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR-3UTR CCA 90 bp | GGTGGCTTGGCTGGGAGCTGCCAGTACAATGACAATGTGGCTCTTCTGAAATGGCCTGTTTTAAAACACTaGGAACCTGTTCAGGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: GGLAGSCQYNDNVALLKWPVLKH*EPVQVL Trigger: AAGCACCTGAACAGGTTCCCAGTGTTTTAAAACAGG...CCATTTCAGAAGAGCCACATTGTCATTGTACTGGCAGCTCCCAGCCAAGCCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR-3UTR GCA 90 bp | ACCTGTTTTAAAACACTGGGAACCTGTTCAGGTGCTTTCAAAGTGTCTGTTCATTCCCAGCTGTGTCTCTaGAGCCACAGGAGCCTGTTC | + |
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Preference number: 2 (lower is better) Translates to: TCFKTLGTCSGAFKVSVHSQLCL*SHRSLF Trigger: GAACAGGCTCCTGTGGCTGCAGAGACACAGCTGGGA...ATGAACAGACACTTTGAAAGCACCTGAACAGGTTCCCAGTGTTTTAAAACAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR TCA 72 bp | TGGGCTGAAGCGGGCAGCTGCCTCAGGGACAACAGCTaGGTCCTGGGGGAGTTAAGGCCGGAGAGGCTGGTC | + |
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Preference number: 3 (lower is better) Translates to: WAEAGSCLRDNS*VLGELRPERLV Trigger: GACCAGCCTCTCCGGCCTTAACTCCCCCAGGACTCAGCTGTTGTCCCTGAGGCAGCTGCCCGCTTCAGCCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR-3UTR CAA 90 bp | CTGCCAGGCTGCAGTGCCCAGCTTGAAGCCACCCATCCCCTCTGGGGAGATCTCCGTCCACCTGTGGCTTaGGTCAGGAGTCCCAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: LPGCSAQLEATHPLWGDLRPPVA*VRSPSC Trigger: ACAGCTGGGACTCCTGACCAAAGCCACAGGTGGACG...GAGATCTCCCCAGAGGGGATGGGTGGCTTCAAGCTGGGCACTGCAGCCTGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR TCA 72 bp | GCTCCTGGCCTGGTGTGGTGTGGTAGCACACGCCTTTaGGCCCAGTACTCTGCAGACAGAGGCAGGCAGATC | + |
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Preference number: 3 (lower is better) Translates to: APGLVWCGSTRL*AQYSADRGRQI Trigger: GATCTGCCTGCCTCTGTCTGCAGAGTACTGGGCTCAAAGGCGTGTGCTACCACACCACACCAGGCCAGGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR GCA 72 bp | GTGGAGGTTAGAGAATTGTGCCCATGGCTGCCAGGCTaGAGTGCCCAGCTTGAAGCCACCCATCCCCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: VEVRELCPWLPG*SAQLEATHPLW Trigger: CCAGAGGGGATGGGTGGCTTCAAGCTGGGCACTGCAGCCTGGCAGCCATGGGCACAATTCTCTAACCTCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR CCA 72 bp | TGGTCCAGTCACAGGCCTCACGTCCACCTGTGGCTTTaGTCAGGAGTCCCAGCTGTGTCTCTGCAGCCACAG | + |
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Preference number: 3 (lower is better) Translates to: WSSHRPHVHLWL*SGVPAVSLQPQ Trigger: CTGTGGCTGCAGAGACACAGCTGGGACTCCTGACCAAAGCCACAGGTGGACGTGAGGCCTGTGACTGGACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR CCA 72 bp | TGGGGTTGGCTGGTGGAGGTTAGAGAATTGTGCCCATaGCTGCCAGGCTGCAGTGCCCAGCTTGAAGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: WGWLVEVRELCP*LPGCSAQLEAT Trigger: GGTGGCTTCAAGCTGGGCACTGCAGCCTGGCAGCCATGGGCACAATTCTCTAACCTCCACCAGCCAACCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| 3UTR-3UTR CAA 90 bp | CAGGAGCAAGGCCTGAGGTCAAAGCTCCGAGTCTGCACAGGACACAGGCATACACCCCTAACCTGTCCCTaGGCAGGCAGGACAGGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: QEQGLRSKLRVCTGHRHTPLTCP*AGRTGV Trigger: AACCCCTGTCCTGCCTGCCAAGGGACAGGTTAGGGG...TGTATGCCTGTGTCCTGTGCAGACTCGGAGCTTTGACCTCAGGCCTTGCTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| 3UTR GCA 72 bp | GTTGGCTGGTGGAGGTTAGAGAATTGTGCCCATGGCTaGCAGGCTGCAGTGCCCAGCTTGAAGCCACCCATC | + |
|
Preference number: 3 (lower is better) Translates to: VGWWRLENCAHG*QAAVPSLKPPI Trigger: GATGGGTGGCTTCAAGCTGGGCACTGCAGCCTGGCAGCCATGGGCACAATTCTCTAACCTCCACCAGCCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| 3UTR GCA 72 bp | ACCTGTGGCTTTGGTCAGGAGTCCCAGCTGTGTCTCTaGAGCCACAGGAGCCTGTTCGTGTCCAGGAACCTT | + |
|
Preference number: 3 (lower is better) Translates to: TCGFGQESQLCL*SHRSLFVSRNL Trigger: AAGGTTCCTGGACACGAACAGGCTCCTGTGGCTGCAGAGACACAGCTGGGACTCCTGACCAAAGCCACAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| 3UTR CCA 72 bp | GGCTGCAGTGCCCAGCTTGAAGCCACCCATCCCCTCTaGGGAGATCTCTTGATGCTGTCCTTCTGGCATCTA | + |
|
Preference number: 3 (lower is better) Translates to: GCSAQLEATHPL*GDLLMLSFWHL Trigger: TAGATGCCAGAAGGACAGCATCAAGAGATCTCCCCAGAGGGGATGGGTGGCTTCAAGCTGGGCACTGCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| 3UTR CCA 72 bp | GCAGCTGACACCTGGTTCCAGAATGGGGTTGGCTGGTaGAGGTTAGAGAATTGTGCCCATGGCTGCCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: AADTWFQNGVGW*RLENCAHGCQA Trigger: AGCCTGGCAGCCATGGGCACAATTCTCTAACCTCCACCAGCCAACCCCATTCTGGAACCAGGTGTCAGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| 3UTR CCA 72 bp | CCTGCAGCTGACACCTGGTTCCAGAATGGGGTTGGCTaGTGGAGGTTAGAGAATTGTGCCCATGGCTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PAADTWFQNGVG*WRLENCAHGCQ Trigger: CTGGCAGCCATGGGCACAATTCTCTAACCTCCACCAGCCAACCCCATTCTGGAACCAGGTGTCAGCTGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| 3UTR TCA 72 bp | TGTCTGTTCATACCTGAGACTGTCCCCACCTGCAGCTaGCACCTGGTTCCAGAATGGGGTTGGCTGGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: CLFIPETVPTCS*HLVPEWGWLVE Trigger: CTCCACCAGCCAACCCCATTCTGGAACCAGGTGTCAGCTGCAGGTGGGGACAGTCTCAGGTATGAACAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| 3UTR CCA 72 bp | CATCCCCTCTGGGGAGATCTCTTGATGCTGTCCTTCTaGCATCTAGGCAGAGTCCCTGTGGTCCCAGAACGT | + |
|
Preference number: 3 (lower is better) Translates to: HPLWGDLLMLSF*HLGRVPVVPER Trigger: ACGTTCTGGGACCACAGGGACTCTGCCTAGATGCCAGAAGGACAGCATCAAGAGATCTCCCCAGAGGGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| 3UTR GCA 72 bp | CATCAGGAGCAAGGCCTGAGGTCAAAGCTCCGAGTCTaGACAGGACACAGGCATACAAAGGTCGCTCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: HQEQGLRSKLRV*TGHRHTKVAHS Trigger: ACTGTGAGCGACCTTTGTATGCCTGTGTCCTGTGCAGACTCGGAGCTTTGACCTCAGGCCTTGCTCCTGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| 3UTR TCA 72 bp | CCCAGTACTCTGCAGACAGAGGCAGGCAGATCTCTATaGGTTCTAGGCCAGGGCCAGTCAGGGTATATAAGG | + |
|
Preference number: 3 (lower is better) Translates to: PSTLQTEAGRSL*VLGQGQSGYIR Trigger: CCTTATATACCCTGACTGGCCCTGGCCTAGAACTCATAGAGATCTGCCTGCCTCTGTCTGCAGAGTACTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| 3UTR CCA 72 bp | CTTCGGTGTGTAGTGTACTCTGGGTTGGTCAGAGGTTaGAAGCACCAAAGACCCCTAACCTGTCCCTTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LRCVVYSGLVRG*KHQRPLTCPLA Trigger: TGCCAAGGGACAGGTTAGGGGTCTTTGGTGCTTCCAACCTCTGACCAACCCAGAGTACACTACACACCGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| 3UTR TCA 72 bp | CATACAAAGGTCGCTCACAGTATGCACAGGTTAATATaGGACACAGTGACGCCGGTGGCTTGGCTGGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: HTKVAHSMHRLI*DTVTPVAWLGA Trigger: AGCTCCCAGCCAAGCCACCGGCGTCACTGTGTCTCATATTAACCTGTGCATACTGTGAGCGACCTTTGTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| 3UTR CCA 72 bp | AGCTGCCAGTACAATGACAATGTGGCTCTTCTGAAATaGACACATCCCTGTCCCGCACCATCAGTAGGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SCQYNDNVALLK*THPCPAPSVGP Trigger: AGGCCCTACTGATGGTGCGGGACAGGGATGTGTCCATTTCAGAAGAGCCACATTGTCATTGTACTGGCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| 3UTR CCA 72 bp | TCCAGGAACCTTCGGTTTCTATTCCAGAAACACAGCTaGGTTCTGCATCTGCTGAGAACCGAGCTGGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SRNLRFLFQKHS*VLHLLRTELAE Trigger: TTCTGCCAGCTCGGTTCTCAGCAGATGCAGAACCCAGCTGTGTTTCTGGAATAGAAACCGAAGGTTCCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| 3UTR CCA 72 bp | GCAGGACAGGGGTTATTATTTTCTCCTGGCCAGAAGTaGCTGTTCCTCAGAATGAAGTCCCTCGGCCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: AGQGLLFSPGQK*LFLRMKSLGLL Trigger: AAGAAGGCCGAGGGACTTCATTCTGAGGAACAGCCACTTCTGGCCAGGAGAAAATAATAACCCCTGTCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| 3UTR-3UTR CAA 90 bp | AGTCCCTCGGCCTTCTTAGCTATCATGTCTTTCCCTTTACAAGGCTCCAGATGTCTAACACACCTCCAATaGCCACCGCCTAGAAACCAA | + |
|
Preference number: 3 (lower is better) Translates to: SPSAFLAIMSFPLQGSRCLTHLQ*PPPRNQ Trigger: TTGGTTTCTAGGCGGTGGCAATTGGAGGTGTGTTAG...ACATCTGGAGCCTTGTAAAGGGAAAGACATGATAGCTAAGAAGGCCGAGGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| 3UTR TCA 72 bp | TATTTTCTCCTGGCCAGAAGTGGCTGTTCCTCAGAATaGAGTCCCTCGGCCTTCTTAGCTATCATGTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: YFLLARSGCSSE*SPSAFLAIMSF Trigger: GAAAGACATGATAGCTAAGAAGGCCGAGGGACTTCATTCTGAGGAACAGCCACTTCTGGCCAGGAGAAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| CDS-3UTR GCA 90 bp | CTGCCAGGCTGCAGTGCCCAGCTTGAAGCCACCCATCCCCTCTGGGGAGATCTCACTGGTGCCCACTGCTaGAGCAGCATCAGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPGCSAQLEATHPLWGDLTGAHC*SSISSQ Trigger: CTGGCTGCTGATGCTGCTGCAGCAGTGGGCACCAGT...GAGATCTCCCCAGAGGGGATGGGTGGCTTCAAGCTGGGCACTGCAGCCTGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| CDS-3UTR CCA 90 bp | GGCCTCGCTTGGCTGCACAAGGCCACGGGGCTTCGGTGTGTAGTGTACTCTGGGTGCTGGGAGAGTATGTaGGCGGAGGGGAACCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLAWLHKATGLRCVVYSGCWESM*AEGNLS Trigger: GGAGAGGTTCCCCTCCGCCCACATACTCTCCCAGCA...CCCAGAGTACACTACACACCGAAGCCCCGTGGCCTTGTGCAGCCAAGCGAGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| CDS-3UTR GCA 90 bp | CTGCCAGGCTGCAGTGCCCAGCTTGAAGCCACCCATCCCCTCTGGGGAGATCTCGGCCGCTGCTGTAGCTaGAGAAACTGTGCAGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPGCSAQLEATHPLWGDLGRCCS*RNCAVA Trigger: GGCAACTGCACAGTTTCTGCAGCTACAGCAGCGGCC...GAGATCTCCCCAGAGGGGATGGGTGGCTTCAAGCTGGGCACTGCAGCCTGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| 3UTR CAA 72 bp | ACACATCCCTGTCCCGCACCATCAGTAGGGCCTCGCTaGGCTGCACAAGGCCACGGGGCTTCGGTGTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: THPCPAPSVGPR*AAQGHGASVCS Trigger: ACTACACACCGAAGCCCCGTGGCCTTGTGCAGCCAAGCGAGGCCCTACTGATGGTGCGGGACAGGGATGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| CDS-3UTR TCA 90 bp | GGACAACAGCTGAGTCCTGGGGGAGTTAAGGCCGGAGAGGCTGGTCCAGTCACATTTCGTCGCCGGGGCTaGAGGTGCTGTCTACTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GQQLSPGGVKAGEAGPVTFRRRG*RCCLLA Trigger: AGCGAGTAGACAGCACCTTCAGCCCCGGCGACGAAA...TGTGACTGGACCAGCCTCTCCGGCCTTAACTCCCCCAGGACTCAGCTGTTGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| CDS-3UTR TCA 90 bp | CTGCCAGGCTGCAGTGCCCAGCTTGAAGCCACCCATCCCCTCTGGGGAGATCTCCATAGCAGATGCCAGTaGGGGCGTCTAGGTAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPGCSAQLEATHPLWGDLHSRCQ*GRLGSP Trigger: AGGACTACCTAGACGCCCTCACTGGCATCTGCTATG...GAGATCTCCCCAGAGGGGATGGGTGGCTTCAAGCTGGGCACTGCAGCCTGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| CDS-3UTR TCA 90 bp | GCTTGGCTGCACAAGGCCACGGGGCTTCGGTGTGTAGTGTACTCTGGGTTGGTCGCCGAGCTTGGGGGTTaGAAGGGTCATCGTCGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: AWLHKATGLRCVVYSGLVAELGG*KGHRRR Trigger: TCGACGACGATGACCCTTTCAACCCCCAAGCTCGGC...GACCAACCCAGAGTACACTACACACCGAAGCCCCGTGGCCTTGTGCAGCCAAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| CDS-3UTR CCA 90 bp | GGCCTCGCTTGGCTGCACAAGGCCACGGGGCTTCGGTGTGTAGTGTACTCTGGGATGATTCCTGCTGCTTaGTCTGCACCGTGTGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GLAWLHKATGLRCVVYSGMIPAA*SAPCGP Trigger: GGGACCACACGGTGCAGACCAAGCAGCAGGAATCAT...CCCAGAGTACACTACACACCGAAGCCCCGTGGCCTTGTGCAGCCAAGCGAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| 3UTR CAA 72 bp | CTGGTCCAGTCACAGGCCTCACGTCCACCTGTGGCTTaGGTCAGGAGTCCCAGCTGTGTCTCTGCAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LVQSQASRPPVA*VRSPSCVSAAT Trigger: TGTGGCTGCAGAGACACAGCTGGGACTCCTGACCAAAGCCACAGGTGGACGTGAGGCCTGTGACTGGACCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| CDS-3UTR TCA 90 bp | GGACAACAGCTGAGTCCTGGGGGAGTTAAGGCCGGAGAGGCTGGTCCAGTCACACCAGGTCACGCAGCATaGTTCCTGCTGCTTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GQQLSPGGVKAGEAGPVTPGHAA*FLLLGL Trigger: CAGACCAAGCAGCAGGAATCATGCTGCGTGACCTGG...TGTGACTGGACCAGCCTCTCCGGCCTTAACTCCCCCAGGACTCAGCTGTTGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| CDS-3UTR GCA 90 bp | GCTTGGCTGCACAAGGCCACGGGGCTTCGGTGTGTAGTGTACTCTGGGTTGGTCCTGAGCCGGGCCAGGTaGTGTTCTAGGTCTACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AWLHKATGLRCVVYSGLVLSRAR*CSRSTF Trigger: GAAGGTAGACCTAGAACAGCACCTGGCCCGGCTCAG...GACCAACCCAGAGTACACTACACACCGAAGCCCCGTGGCCTTGTGCAGCCAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| CDS-3UTR GCA 90 bp | AAACACAGCTGGGTTCTGCATCTGCTGAGAACCGAGCTGGCAGAAGAGGCAGGTAGGGAGGCTGAAGGCTaGACTGGCTGCCAAGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: KHSWVLHLLRTELAEEAGREAEG*TGCQGR Trigger: GCGGCCTTGGCAGCCAGTGCAGCCTTCAGCCTCCCT...ACCTGCCTCTTCTGCCAGCTCGGTTCTCAGCAGATGCAGAACCCAGCTGTGTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| CDS-3UTR CCA 90 bp | CTGCCAGGCTGCAGTGCCCAGCTTGAAGCCACCCATCCCCTCTGGGGAGATCTCATTCCAGAGAAGGTGTaGTTCGCGTTGTCCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPGCSAQLEATHPLWGDLIPEKV*FALSRE Trigger: CTCCCTGGACAACGCGAACCACACCTTCTCTGGAAT...GAGATCTCCCCAGAGGGGATGGGTGGCTTCAAGCTGGGCACTGCAGCCTGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| CDS-3UTR CCA 90 bp | CTGCCAGGCTGCAGTGCCCAGCTTGAAGCCACCCATCCCCTCTGGGGAGATCTCCAACCTGGATCTGCATaGTGGTCAATGAGCGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPGCSAQLEATHPLWGDLQPGSA*WSMSAG Trigger: TCCAGCGCTCATTGACCACCATGCAGATCCAGGTTG...GAGATCTCCCCAGAGGGGATGGGTGGCTTCAAGCTGGGCACTGCAGCCTGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| CDS-3UTR CCA 90 bp | CTGCCAGGCTGCAGTGCCCAGCTTGAAGCCACCCATCCCCTCTGGGGAGATCTCAGCAGGCCTCCAACCTaGATCTGCATGGTGGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LPGCSAQLEATHPLWGDLSRPPT*ICMVVN Trigger: ATTGACCACCATGCAGATCCAGGTTGGAGGCCTGCT...GAGATCTCCCCAGAGGGGATGGGTGGCTTCAAGCTGGGCACTGCAGCCTGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| CDS-3UTR CCA 90 bp | GGGAGATCTCTTGATGCTGTCCTTCTGGCATCTAGGCAGAGTCCCTGTGGTCCCCGGCACAGGTCAGGGTaGAGAAAGCCAGGGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRSLDAVLLASRQSPCGPRHRSG*RKPGQP Trigger: TGGCTGCCCTGGCTTTCTCCACCCTGACCTGTGCCG...GGGACCACAGGGACTCTGCCTAGATGCCAGAAGGACAGCATCAAGAGATCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| CDS-3UTR TCA 90 bp | GGTGGCTTGGCTGGGAGCTGCCAGTACAATGACAATGTGGCTCTTCTGAAATGGTGGTCAGCTGCGTGGTaGCCTCCCTCCACACGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GGLAGSCQYNDNVALLKWWSAAW*PPSTRA Trigger: TGCCCGTGTGGAGGGAGGTCACCACGCAGCTGACCA...CCATTTCAGAAGAGCCACATTGTCATTGTACTGGCAGCTCCCAGCCAAGCCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| CDS-3UTR GCA 90 bp | ATTCCAGAAACACAGCTGGGTTCTGCATCTGCTGAGAACCGAGCTGGCAGAAGAAGGCGCAGGCCGAGGTaGGGAACGCTGTGCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IPETQLGSASAENRAGRRRRRPR*GTLCSH Trigger: GTGGCTGCACAGCGTTCCGCACCTCGGCCTGCGCCT...TCTTCTGCCAGCTCGGTTCTCAGCAGATGCAGAACCCAGCTGTGTTTCTGGAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| CDS-3UTR TCA 90 bp | GGGAGATCTCTTGATGCTGTCCTTCTGGCATCTAGGCAGAGTCCCTGTGGTCCCCTGCATGGTGGTCAATaGGCGCTGGAAGGTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRSLDAVLLASRQSPCGPLHGGQ*ALEGGQ Trigger: CTGACCACCTTCCAGCGCTCATTGACCACCATGCAG...GGGACCACAGGGACTCTGCCTAGATGCCAGAAGGACAGCATCAAGAGATCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| CDS-3UTR TCA 90 bp | GTCCCCTCCTCAATTACCATTTTTCATCTGCTGAGGGTGGGACTTAAGGTGGGCGTCTGGGAGGGAGGCTaGAGGCTGCACTGGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VPSSITIFHLLRVGLKVGVWEGG*RLHWLP Trigger: TGGCAGCCAGTGCAGCCTTCAGCCTCCCTCCCAGAC...GCCCACCTTAAGTCCCACCCTCAGCAGATGAAAAATGGTAATTGAGGAGGGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| CDS-3UTR GCA 90 bp | GTCCCCTCCTCAATTACCATTTTTCATCTGCTGAGGGTGGGACTTAAGGTGGGCTCCTGCTGCTTGGTCTaGACCGTGTGGTCCCGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VPSSITIFHLLRVGLKVGSCCLV*TVWSRR Trigger: CCGGCGGGACCACACGGTGCAGACCAAGCAGCAGGA...GCCCACCTTAAGTCCCACCCTCAGCAGATGAAAAATGGTAATTGAGGAGGGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| CDS-3UTR CCA 90 bp | CAGGAGCAAGGCCTGAGGTCAAAGCTCCGAGTCTGCACAGGACACAGGCATACACCATGCAGAAGTCACTaGTGCCCACTGCTGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QEQGLRSKLRVCTGHRHTPCRSH*CPLLQQ Trigger: CTGCTGCAGCAGTGGGCACCAGTGACTTCTGCATGG...TGTATGCCTGTGTCCTGTGCAGACTCGGAGCTTTGACCTCAGGCCTTGCTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| CDS-3UTR TCA 90 bp | AAACACAGCTGGGTTCTGCATCTGCTGAGAACCGAGCTGGCAGAAGAGGCAGGTCTGGAAGGTGGTCAGTaGCTGCTGGAACGGGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KHSWVLHLLRTELAEEAGLEGGQ*LLERAD Trigger: ATCAGCCCGTTCCAGCAGTCACTGACCACCTTCCAG...ACCTGCCTCTTCTGCCAGCTCGGTTCTCAGCAGATGCAGAACCCAGCTGTGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| CDS-3UTR GCA 90 bp | ATTCCAGAAACACAGCTGGGTTCTGCATCTGCTGAGAACCGAGCTGGCAGAAGAAGGTGCGGAACGCTGTaGAGCCACACGACCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: IPETQLGSASAENRAGRRRCGTL*SHTTHQ Trigger: CTGGTGGGTCGTGTGGCTGCACAGCGTTCCGCACCT...TCTTCTGCCAGCTCGGTTCTCAGCAGATGCAGAACCCAGCTGTGTTTCTGGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| CDS-3UTR GCA 90 bp | AAACACAGCTGGGTTCTGCATCTGCTGAGAACCGAGCTGGCAGAAGAGGCAGGTGGCTGCCAAGGCCGCTaGTGTAGCTGCAGAAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: KHSWVLHLLRTELAEEAGGCQGR*CSCRNC Trigger: ACAGTTTCTGCAGCTACAGCAGCGGCCTTGGCAGCC...ACCTGCCTCTTCTGCCAGCTCGGTTCTCAGCAGATGCAGAACCCAGCTGTGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| CDS-3UTR CCA 90 bp | ATTCCAGAAACACAGCTGGGTTCTGCATCTGCTGAGAACCGAGCTGGCAGAAGATTGGTCTGCACCGTGTaGTCCCGCCGGCAGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IPETQLGSASAENRAGRRLVCTV*SRRQQH Trigger: ATGCTGCTGCCGGCGGGACCACACGGTGCAGACCAA...TCTTCTGCCAGCTCGGTTCTCAGCAGATGCAGAACCCAGCTGTGTTTCTGGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| 3UTR CAA 72 bp | AAGGCCACGGGGCTTCGGTGTGTAGTGTACTCTGGGTaGGTCAGAGGTTGGAAGCACCAAAGACCCCTAACC | + |
|
Preference number: 4 (lower is better) Translates to: KATGLRCVVYSG*VRGWKHQRPLT Trigger: GGTTAGGGGTCTTTGGTGCTTCCAACCTCTGACCAACCCAGAGTACACTACACACCGAAGCCCCGTGGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| CDS-3UTR GCA 90 bp | CCCCTCTGGGGAGATCTCTTGATGCTGTCCTTCTGGCATCTAGGCAGAGTCCCTAGATGTCAGGAGCCATaGAGAAGTCACTGGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLWGDLLMLSFWHLGRVPRCQEP*RSHWCP Trigger: TGGGCACCAGTGACTTCTGCATGGCTCCTGACATCT...AGGGACTCTGCCTAGATGCCAGAAGGACAGCATCAAGAGATCTCCCCAGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| CDS-3UTR GCA 90 bp | AAAAATCAAAGCAAATCTGCTCCTGGCCTGGTGTGGTGTGGTAGCACACGCCTTAGGGGCACGGCAAACTaGAGCAGGCCTCCAACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KNQSKSAPGLVWCGSTRLRGTAN*SRPPTW Trigger: CCAGGTTGGAGGCCTGCTGCAGTTTGCCGTGCCCCT...AAGGCGTGTGCTACCACACCACACCAGGCCAGGAGCAGATTTGCTTTGATTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| CDS-3UTR CCA 90 bp | GGTGGCTTGGCTGGGAGCTGCCAGTACAATGACAATGTGGCTCTTCTGAAATGGAGGTGGGTCTCATGCTaGGAGAGTATGTGGGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GGLAGSCQYNDNVALLKWRWVSC*ESMWAE Trigger: CTCCGCCCACATACTCTCCCAGCATGAGACCCACCT...CCATTTCAGAAGAGCCACATTGTCATTGTACTGGCAGCTCCCAGCCAAGCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| CDS-3UTR TCA 90 bp | GGGCTTCGGTGTGTAGTGTACTCTGGGTTGGTCAGAGGTTGGAAGCACCAAAGACCAGAGAAGCCCAGCTaGGGATCAGGGTCAGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: GLRCVVYSGLVRGWKHQRPEKPS*GSGSVF Trigger: GAATACTGACCCTGATCCTCAGCTGGGCTTCTCTGG...TCTTTGGTGCTTCCAACCTCTGACCAACCCAGAGTACACTACACACCGAAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS-3UTR GCA 90 bp | AATGACAATGTGGCTCTTCTGAAATGGACACATCCCTGTCCCGCACCATCAGTAGAAGGCTGCACTGGCTaGCAAGGCCGCTGCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: NDNVALLKWTHPCPAPSVEGCTG*QGRCCS Trigger: GCTACAGCAGCGGCCTTGGCAGCCAGTGCAGCCTTC...TACTGATGGTGCGGGACAGGGATGTGTCCATTTCAGAAGAGCCACATTGTCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS-3UTR CCA 90 bp | TCTAGGCCAGGGCCAGTCAGGGTATATAAGGAGACCGCAGCAAAACAAAACCCCGTGGTCAATGAGCGCTaGAAGGTGGTCAGTGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRPGPVRVYKETAAKQNPVVNER*KVVSDC Trigger: GCAGTCACTGACCACCTTCCAGCGCTCATTGACCAC...GGGGTTTTGTTTTGCTGCGGTCTCCTTATATACCCTGACTGGCCCTGGCCTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| 3UTR CAA 72 bp | GCACAGGTTAATATGAGACACAGTGACGCCGGTGGCTaGGCTGGGAGCTGCCAGTACAATGACAATGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AQVNMRHSDAGG*AGSCQYNDNVA Trigger: AGCCACATTGTCATTGTACTGGCAGCTCCCAGCCAAGCCACCGGCGTCACTGTGTCTCATATTAACCTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS-3UTR CCA 90 bp | CTCTTGATGCTGTCCTTCTGGCATCTAGGCAGAGTCCCTGTGGTCCCAGAACGTTCTACCTTCATCCTCTaGGTGTTTGCAGACACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLMLSFWHLGRVPVVPERSTFIL*VFADTS Trigger: GCTGGTGTCTGCAAACACCCAGAGGATGAAGGTAGA...ACGTTCTGGGACCACAGGGACTCTGCCTAGATGCCAGAAGGACAGCATCAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS-3UTR CCA 90 bp | GGGCTTCGGTGTGTAGTGTACTCTGGGTTGGTCAGAGGTTGGAAGCACCAAAGATTCCACAGCACAGCATaGAGGCTAGGAGACACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLRCVVYSGLVRGWKHQRFHSTA*RLGDTW Trigger: CCAAGTGTCTCCTAGCCTCCATGCTGTGCTGTGGAA...TCTTTGGTGCTTCCAACCTCTGACCAACCCAGAGTACACTACACACCGAAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS-3UTR CCA 90 bp | ATTCCAGAAACACAGCTGGGTTCTGCATCTGCTGAGAACCGAGCTGGCAGAAGAATGAGCGCTGGAAGGTaGTCAGTGACTGCTGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: IPETQLGSASAENRAGRRMSAGR*SVTAGT Trigger: CGTTCCAGCAGTCACTGACCACCTTCCAGCGCTCAT...TCTTCTGCCAGCTCGGTTCTCAGCAGATGCAGAACCCAGCTGTGTTTCTGGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS-3UTR GCA 90 bp | AAACACAGCTGGGTTCTGCATCTGCTGAGAACCGAGCTGGCAGAAGAGGCAGGTGCTGACGACATTGCCTaGCATCTGTTGCATAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: KHSWVLHLLRTELAEEAGADDIA*HLLHKL Trigger: AAGTTTATGCAACAGATGGCAGGCAATGTCGTCAGC...ACCTGCCTCTTCTGCCAGCTCGGTTCTCAGCAGATGCAGAACCCAGCTGTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS-3UTR CCA 90 bp | AATGACAATGTGGCTCTTCTGAAATGGACACATCCCTGTCCCGCACCATCAGTACCTGGATCTGCATGGTaGTCAATGAGCGCTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NDNVALLKWTHPCPAPSVPGSAW*SMSAGR Trigger: CCTTCCAGCGCTCATTGACCACCATGCAGATCCAGG...TACTGATGGTGCGGGACAGGGATGTGTCCATTTCAGAAGAGCCACATTGTCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS-3UTR CCA 90 bp | ACCTGTTTTAAAACACTGGGAACCTGTTCAGGTGCTTTCAAAGTGTCTGTTCATAGGCTAGGAGACACTTaGACCGCCTGGCCAGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TCFKTLGTCSGAFKVSVHRLGDT*TAWPVP Trigger: TGGGACTGGCCAGGCGGTCCAAGTGTCTCCTAGCCT...ATGAACAGACACTTTGAAAGCACCTGAACAGGTTCCCAGTGTTTTAAAACAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS-3UTR CCA 90 bp | CGGTGTGTAGTGTACTCTGGGTTGGTCAGAGGTTGGAAGCACCAAAGACCCCTATTGTTTAGCAGAAGCTaGATGCCAAGAAGGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RCVVYSGLVRGWKHQRPLLFSRS*MPRRSF Trigger: GAAAGACCTTCTTGGCATCCAGCTTCTGCTAAACAA...TAGGGGTCTTTGGTGCTTCCAACCTCTGACCAACCCAGAGTACACTACACACCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS-3UTR CCA 90 bp | ATTCCAGAAACACAGCTGGGTTCTGCATCTGCTGAGAACCGAGCTGGCAGAAGACCAAAGAGTATGGCCTaGTTCATGTACTCAGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: IPETQLGSASAENRAGRRPKSMA*FMYSET Trigger: AGTCTCTGAGTACATGAACCAGGCCATACTCTTTGG...TCTTCTGCCAGCTCGGTTCTCAGCAGATGCAGAACCCAGCTGTGTTTCTGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS-3UTR CCA 90 bp | AAAAATCAAAGCAAATCTGCTCCTGGCCTGGTGTGGTGTGGTAGCACACGCCTTTCCCACCAAAGAGTATaGCCTGGTTCATGTACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KNQSKSAPGLVWCGSTRLSHQRV*PGSCTQ Trigger: CTGAGTACATGAACCAGGCCATACTCTTTGGTGGGA...AAGGCGTGTGCTACCACACCACACCAGGCCAGGAGCAGATTTGCTTTGATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS-3UTR GCA 90 bp | AATGACAATGTGGCTCTTCTGAAATGGACACATCCCTGTCCCGCACCATCAGTATTGCCTGCCATCTGTTaGATAAACTTCAGGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NDNVALLKWTHPCPAPSVLPAIC*INFRVW Trigger: CCAGACCCTGAAGTTTATGCAACAGATGGCAGGCAA...TACTGATGGTGCGGGACAGGGATGTGTCCATTTCAGAAGAGCCACATTGTCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS-3UTR GCA 90 bp | AAAAATCAAAGCAAATCTGCTCCTGGCCTGGTGTGGTGTGGTAGCACACGCCTTTTAGCAGAAGCTGGATaGCAAGAAGGTCTTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KNQSKSAPGLVWCGSTRLLAEAG*QEGLSL Trigger: CAGAGAAAGACCTTCTTGGCATCCAGCTTCTGCTAA...AAGGCGTGTGCTACCACACCACACCAGGCCAGGAGCAGATTTGCTTTGATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS-3UTR CCA 90 bp | AGTCCCTCGGCCTTCTTAGCTATCATGTCTTTCCCTTTACAAGGCTCCAGATGTGATGCATCCCATCGTTaGTCTCGCTGTTTCCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPSAFLAIMSFPLQGSRCDASHR*SRCFHR Trigger: TCTATGGAAACAGCGAGACCAACGATGGGATGCATC...ACATCTGGAGCCTTGTAAAGGGAAAGACATGATAGCTAAGAAGGCCGAGGGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS-3UTR CCA 90 bp | ACCTGTTTTAAAACACTGGGAACCTGTTCAGGTGCTTTCAAAGTGTCTGTTCATAACATGGCGGTCAACTaGTGCAGGCTGATCTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TCFKTLGTCSGAFKVSVHNMAVN*CRLISE Trigger: CTCCGAGATCAGCCTGCACCAGTTGACCGCCATGTT...ATGAACAGACACTTTGAAAGCACCTGAACAGGTTCCCAGTGTTTTAAAACAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS-3UTR CCA 90 bp | ACCTGTTTTAAAACACTGGGAACCTGTTCAGGTGCTTTCAAAGTGTCTGTTCATCCACGGACATGTAGGTaGGTCTCATGCTGGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TCFKTLGTCSGAFKVSVHPRTCR*VSCWES Trigger: ACTCTCCCAGCATGAGACCCACCTACATGTCCGTGG...ATGAACAGACACTTTGAAAGCACCTGAACAGGTTCCCAGTGTTTTAAAACAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS-3UTR GCA 90 bp | ACCTGTTTTAAAACACTGGGAACCTGTTCAGGTGCTTTCAAAGTGTCTGTTCATCATCCTCTGGGTGTTTaGAGACACCAGCTCATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TCFKTLGTCSGAFKVSVHHPLGV*RHQLIH Trigger: ATGGATGAGCTGGTGTCTGCAAACACCCAGAGGATG...ATGAACAGACACTTTGAAAGCACCTGAACAGGTTCCCAGTGTTTTAAAACAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS GCA 90 bp | GTGCTGTCTACTCGCTGCAGGCGCAGGCCGAGGTGCGGAACGCTGTaGAGCCACACGACCCACCAGGGCGCGATGTACTCCACTCGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: VLSTRCRRRPRCGTL*SHTTHQGAMYSTRA Trigger: GGCGCGAGTGGAGTACATCGCGCCCTGGTGGGTCGTGTGGCTGCACAGCGTTCCGCACCTCGGCCTGCGCCTGCAGCGAGTAGACAGCAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS GCA 90 bp | CCGGGGCTGAAGGTGCTGTCTACTCGCTGCAGGCGCAGGCCGAGGTaGGGAACGCTGTGCAGCCACACGACCCACCAGGGCGCGATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PGLKVLSTRCRRRPR*GTLCSHTTHQGAMY Trigger: GTACATCGCGCCCTGGTGGGTCGTGTGGCTGCACAGCGTTCCGCACCTCGGCCTGCGCCTGCAGCGAGTAGACAGCACCTTCAGCCCCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS TCA 90 bp | ACAGCAGAGGAGCCCAGCCACCACCGCCGTCCAGGTCACGCAGCATaGTTCCTGCTGCTTGGTCTGCACCGTGTGGTCCCGCCGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TAEEPSHHRRPGHAA*FLLLGLHRVVPPAA Trigger: TGCTGCCGGCGGGACCACACGGTGCAGACCAAGCAGCAGGAATCATGCTGCGTGACCTGGACGGCGGTGGTGGCTGGGCTCCTCTGCTGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS GCA 90 bp | AGCCCAGCCACCACCGCCGTCCAGGTCACGCAGCATGATTCCTGCTaGTTGGTCTGCACCGTGTGGTCCCGCCGGCAGCAGCATGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SPATTAVQVTQHDSC*LVCTVWSRRQQHVH Trigger: GTGCACATGCTGCTGCCGGCGGGACCACACGGTGCAGACCAAGCAGCAGGAATCATGCTGCGTGACCTGGACGGCGGTGGTGGCTGGGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS GCA 90 bp | AGGAGCCCAGCCACCACCGCCGTCCAGGTCACGCAGCATGATTCCTaGTGCTTGGTCTGCACCGTGTGGTCCCGCCGGCAGCAGCATGTG | + |
|
Preference number: 5 (lower is better) Translates to: RSPATTAVQVTQHDS*CLVCTVWSRRQQHV Trigger: CACATGCTGCTGCCGGCGGGACCACACGGTGCAGACCAAGCAGCAGGAATCATGCTGCGTGACCTGGACGGCGGTGGTGGCTGGGCTCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS TCA 90 bp | CCCCCAGGAAGAGCAGCGACTCCTGGTAAGTTTCGTCGCCGGGGCTaGAGGTGCTGTCTACTCGCTGCAGGCGCAGGCCGAGGTGCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PPGRAATPGKFRRRG*RCCLLAAGAGRGAE Trigger: TTCCGCACCTCGGCCTGCGCCTGCAGCGAGTAGACAGCACCTTCAGCCCCGGCGACGAAACTTACCAGGAGTCGCTGCTCTTCCTGGGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CCA 90 bp | CAGCCACCACCGCCGTCCAGGTCACGCAGCATGATTCCTGCTGCTTaGTCTGCACCGTGTGGTCCCGCCGGCAGCAGCATGTGCACACCA | + |
|
Preference number: 5 (lower is better) Translates to: QPPPPSRSRSMIPAA*SAPCGPAGSSMCTP Trigger: TGGTGTGCACATGCTGCTGCCGGCGGGACCACACGGTGCAGACCAAGCAGCAGGAATCATGCTGCGTGACCTGGACGGCGGTGGTGGCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS GCA 90 bp | AGGGAGGCTGAAGGCTGCACTGGCTGCCAAGGCCGCTGCTGTAGCTaGAGAAACTGTGCAGTTGCCCCCTCGTGGGGTTATGGGCCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: REAEGCTGCQGRCCS*RNCAVAPSWGYGPR Trigger: TCGCGGCCCATAACCCCACGAGGGGGCAACTGCACAGTTTCTGCAGCTACAGCAGCGGCCTTGGCAGCCAGTGCAGCCTTCAGCCTCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS-3UTR CAA 90 bp | GGCCTCGCTTGGCTGCACAAGGCCACGGGGCTTCGGTGTGTAGTGTACTCTGGGGTCTGGTGGGACAGCTaGGTCAGCTGCGTGGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: GLAWLHKATGLRCVVYSGVWWDS*VSCVVT Trigger: GGTCACCACGCAGCTGACCAAGCTGTCCCACCAGAC...CCCAGAGTACACTACACACCGAAGCCCCGTGGCCTTGTGCAGCCAAGCGAGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS GCA 90 bp | GGGCATTGGAGATGGTCTGGGAGGGAGGCTGAAGGCTGCACTGGCTaGCAAGGCCGCTGCTGTAGCTGCAGAAACTGTGCAGTTGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GHWRWSGREAEGCTG*QGRCCSCRNCAVAP Trigger: GGGGGCAACTGCACAGTTTCTGCAGCTACAGCAGCGGCCTTGGCAGCCAGTGCAGCCTTCAGCCTCCCTCCCAGACCATCTCCAATGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CCA 90 bp | AGAGTATGGCCTGGTTCATGTACTCAGAGACTGGGGCATTGGAGATaGTCTGGGAGGGAGGCTGAAGGCTGCACTGGCTGCCAAGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RVWPGSCTQRLGHWR*SGREAEGCTGCQGR Trigger: GCGGCCTTGGCAGCCAGTGCAGCCTTCAGCCTCCCTCCCAGACCATCTCCAATGCCCCAGTCTCTGAGTACATGAACCAGGCCATACTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS TCA 90 bp | TGGTGCCCACTGCTGCAGCAGCATCAGCAGCCAGAGAAGCCCAGCTaGGGATCAGGGTCAGTATTCCACAGCACAGCATGGAGGCTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: WCPLLQQHQQPEKPS*GSGSVFHSTAWRLG Trigger: TCCTAGCCTCCATGCTGTGCTGTGGAATACTGACCCTGATCCTCAGCTGGGCTTCTCTGGCTGCTGATGCTGCTGCAGCAGTGGGCACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CCA 90 bp | GGAACTCGTAGTGTCTCAGGTGTTCATCCGCCACGGACATGTAGGTaGGTCTCATGCTGGGAGAGTATGTGGGCGGAGGGGAACCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GTRSVSGVHPPRTCR*VSCWESMWAEGNLS Trigger: GGAGAGGTTCCCCTCCGCCCACATACTCTCCCAGCATGAGACCCACCTACATGTCCGTGGCGGATGAACACCTGAGACACTACGAGTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS GCA 90 bp | GATGTAGATGTCAGGAGCCATGCAGAAGTCACTGGTGCCCACTGCTaGAGCAGCATCAGCAGCCAGAGAAGCCCAGCTGAGGATCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: DVDVRSHAEVTGAHC*SSISSQRSPAEDQG Trigger: ACCCTGATCCTCAGCTGGGCTTCTCTGGCTGCTGATGCTGCTGCAGCAGTGGGCACCAGTGACTTCTGCATGGCTCCTGACATCTACATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS GCA 90 bp | CAGGATGTAGATGTCAGGAGCCATGCAGAAGTCACTGGTGCCCACTaGTGCAGCAGCATCAGCAGCCAGAGAAGCCCAGCTGAGGATCAG | + |
|
Preference number: 5 (lower is better) Translates to: QDVDVRSHAEVTGAH*CSSISSQRSPAEDQ Trigger: CTGATCCTCAGCTGGGCTTCTCTGGCTGCTGATGCTGCTGCAGCAGTGGGCACCAGTGACTTCTGCATGGCTCCTGACATCTACATCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS GCA 90 bp | CCAAGAAGGTCTTTCTCTGCTGTAGGGAAGAGGGGCACGGCAAACTaGAGCAGGCCTCCAACCTGGATCTGCATGGTGGTCAATGAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PRRSFSAVGKRGTAN*SRPPTWICMVVNER Trigger: GCGCTCATTGACCACCATGCAGATCCAGGTTGGAGGCCTGCTGCAGTTTGCCGTGCCCCTCTTCCCTACAGCAGAGAAAGACCTTCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS-3UTR CAA 90 bp | ATTCCAGAAACACAGCTGGGTTCTGCATCTGCTGAGAACCGAGCTGGCAGAAGAGAGGCTAGGAGACACTaGGACCGCCTGGCCAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: IPETQLGSASAENRAGRREARRH*DRLASP Trigger: GGGACTGGCCAGGCGGTCCAAGTGTCTCCTAGCCTC...TCTTCTGCCAGCTCGGTTCTCAGCAGATGCAGAACCCAGCTGTGTTTCTGGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS-3UTR CAA 90 bp | GGGAGATCTCTTGATGCTGTCCTTCTGGCATCTAGGCAGAGTCCCTGTGGTCCCCGGGTCACCTCTGAGTaGATCTGGCTCCCTGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GRSLDAVLLASRQSPCGPRVTSE*IWLPVL Trigger: CAACACAGGGAGCCAGATCAACTCAGAGGTGACCCG...GGGACCACAGGGACTCTGCCTAGATGCCAGAAGGACAGCATCAAGAGATCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CCA 90 bp | TCGCTGAGCCGGGCCAGGTGCTGTTCTAGGTCTACCTTCATCCTCTaGGTGTTTGCAGACACCAGCTCATCCATTCCAGAGAAGGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLSRARCCSRSTFIL*VFADTSSSIPEKVW Trigger: CCACACCTTCTCTGGAATGGATGAGCTGGTGTCTGCAAACACCCAGAGGATGAAGGTAGACCTAGAACAGCACCTGGCCCGGCTCAGCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CCA 90 bp | TGGGTTCCCACCAAAGAGTATGGCCTGGTTCATGTACTCAGAGACTaGGGCATTGGAGATGGTCTGGGAGGGAGGCTGAAGGCTGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: WVPTKEYGLVHVLRD*GIGDGLGGRLKAAL Trigger: CAGTGCAGCCTTCAGCCTCCCTCCCAGACCATCTCCAATGCCCCAGTCTCTGAGTACATGAACCAGGCCATACTCTTTGGTGGGAACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CCA 90 bp | CATGCTGGGAGAGTATGTGGGCGGAGGGGAACCTCTCCCGATGAGTaGCACATTTTCGTATCGTGGGTTCCCACCAAAGAGTATGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: HAGRVCGRRGTSPDE*HIFVSWVPTKEYGL Trigger: CAGGCCATACTCTTTGGTGGGAACCCACGATACGAAAATGTGCCACTCATCGGGAGAGGTTCCCCTCCGCCCACATACTCTCCCAGCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS TCA 90 bp | GTCTCATGCTGGGAGAGTATGTGGGCGGAGGGGAACCTCTCCCGATaGGTGGCACATTTTCGTATCGTGGGTTCCCACCAAAGAGTATGG | + |
|
Preference number: 5 (lower is better) Translates to: VSCWESMWAEGNLSR*VAHFRIVGSHQRVW Trigger: CCATACTCTTTGGTGGGAACCCACGATACGAAAATGTGCCACTCATCGGGAGAGGTTCCCCTCCGCCCACATACTCTCCCAGCATGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CCA 90 bp | GGGCGGAGGGGAACCTCTCCCGATGAGTGGCACATTTTCGTATCGTaGGTTCCCACCAAAGAGTATGGCCTGGTTCATGTACTCAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GRRGTSPDEWHIFVS*VPTKEYGLVHVLRD Trigger: GTCTCTGAGTACATGAACCAGGCCATACTCTTTGGTGGGAACCCACGATACGAAAATGTGCCACTCATCGGGAGAGGTTCCCCTCCGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS TCA 90 bp | TGTGCAGCCCTCGGCAATCCAACATGGCGGTCAACTGGTGCAGGCTaGTCTCGGAGTTGTTTAGCAGAAGCTGGATGCCAAGAAGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CAALGNPTWRSTGAG*SRSCLAEAGCQEGL Trigger: AAGACCTTCTTGGCATCCAGCTTCTGCTAAACAACTCCGAGATCAGCCTGCACCAGTTGACCGCCATGTTGGATTGCCGAGGGCTGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS-3UTR CAA 90 bp | GTCCCCTCCTCAATTACCATTTTTCATCTGCTGAGGGTGGGACTTAAGGTGGGCGCAGAAACTGTGCAGTaGCCCCCTCGTGGGGTTATG | + |
|
Preference number: 5 (lower is better) Translates to: VPSSITIFHLLRVGLKVGAETVQ*PPRGVM Trigger: CATAACCCCACGAGGGGGCAACTGCACAGTTTCTGC...GCCCACCTTAAGTCCCACCCTCAGCAGATGAAAAATGGTAATTGAGGAGGGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS-3UTR CAA 90 bp | GTCCCCTCCTCAATTACCATTTTTCATCTGCTGAGGGTGGGACTTAAGGTGGGCTCAGAGACTGGGGCATaGGAGATGGTCTGGGAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VPSSITIFHLLRVGLKVGSETGA*EMVWEG Trigger: TCCCTCCCAGACCATCTCCAATGCCCCAGTCTCTGA...GCCCACCTTAAGTCCCACCCTCAGCAGATGAAAAATGGTAATTGAGGAGGGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
||
| CDS-3UTR CAA 90 bp | GGGCTTCGGTGTGTAGTGTACTCTGGGTTGGTCAGAGGTTGGAAGCACCAAAGATCATCCTCTGGGTGTTaGCAGACACCAGCTCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: GLRCVVYSGLVRGWKHQRSSSGC*QTPAHP Trigger: TGGATGAGCTGGTGTCTGCAAACACCCAGAGGATGA...TCTTTGGTGCTTCCAACCTCTGACCAACCCAGAGTACACTACACACCGAAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS TCA 90 bp | TTAGGCTCTGACTGCAATGGAGGTAGTACCGGGTCACCTCTGAGTTaGTCTGGCTCCCTGTGTTGTTCAGGATGTAGATGTCAGGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LGSDCNGGSTGSPLS*SGSLCCSGCRCQEP Trigger: TGGCTCCTGACATCTACATCCTGAACAACACAGGGAGCCAGATCAACTCAGAGGTGACCCGGTACTACCTCCATTGCAGTCAGAGCCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CCA 90 bp | AGTGGCACATTTTCGTATCGTGGGTTCCCACCAAAGAGTATGGCCTaGTTCATGTACTCAGAGACTGGGGCATTGGAGATGGTCTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: SGTFSYRGFPPKSMA*FMYSETGALEMVWE Trigger: CTCCCAGACCATCTCCAATGCCCCAGTCTCTGAGTACATGAACCAGGCCATACTCTTTGGTGGGAACCCACGATACGAAAATGTGCCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS-3UTR CAA 90 bp | AGTCCCTCGGCCTTCTTAGCTATCATGTCTTTCCCTTTACAAGGCTCCAGATGTAGGCTGATCTCGGAGTaGTTTAGCAGAAGCTGGATG | + |
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Preference number: 5 (lower is better) Translates to: SPSAFLAIMSFPLQGSRCRLISE*FSRSWM Trigger: CATCCAGCTTCTGCTAAACAACTCCGAGATCAGCCT...ACATCTGGAGCCTTGTAAAGGGAAAGACATGATAGCTAAGAAGGCCGAGGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS GCA 72 bp | ACTCGCTGCAGGCGCAGGCCGAGGTGCGGAACGCTGTaGAGCCACACGACCCACCAGGGCGCGATGTACTCC | + |
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Preference number: 6 (lower is better) Translates to: TRCRRRPRCGTL*SHTTHQGAMYS Trigger: GGAGTACATCGCGCCCTGGTGGGTCGTGTGGCTGCACAGCGTTCCGCACCTCGGCCTGCGCCTGCAGCGAGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS TCA 72 bp | AGGCAGTCTGGTGGGACAGCTTGGTCAGCTGCGTGGTaGCCTCCCTCCACACGGGCAGCCCCGAGAGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: RQSGGTAWSAAW*PPSTRAAPRAG Trigger: GCCAGCTCTCGGGGCTGCCCGTGTGGAGGGAGGTCACCACGCAGCTGACCAAGCTGTCCCACCAGACTGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS GCA 72 bp | AAGGTGCTGTCTACTCGCTGCAGGCGCAGGCCGAGGTaGGGAACGCTGTGCAGCCACACGACCCACCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: KVLSTRCRRRPR*GTLCSHTTHQG Trigger: GCCCTGGTGGGTCGTGTGGCTGCACAGCGTTCCGCACCTCGGCCTGCGCCTGCAGCGAGTAGACAGCACCTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS GCA 72 bp | GTTTCGTCGCCGGGGCTGAAGGTGCTGTCTACTCGCTaGAGGCGCAGGCCGAGGTGCGGAACGCTGTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: VSSPGLKVLSTR*RRRPRCGTLCS Trigger: GCTGCACAGCGTTCCGCACCTCGGCCTGCGCCTGCAGCGAGTAGACAGCACCTTCAGCCCCGGCGACGAAAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS GCA 72 bp | GCCACCACCGCCGTCCAGGTCACGCAGCATGATTCCTaGTGCTTGGTCTGCACCGTGTGGTCCCGCCGGCAG | + |
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Preference number: 6 (lower is better) Translates to: ATTAVQVTQHDS*CLVCTVWSRRQ Trigger: CTGCCGGCGGGACCACACGGTGCAGACCAAGCAGCAGGAATCATGCTGCGTGACCTGGACGGCGGTGGTGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CAA 90 bp | CCAGCCACCACCGCCGTCCAGGTCACGCAGCATGATTCCTGCTGCTaGGTCTGCACCGTGTGGTCCCGCCGGCAGCAGCATGTGCACACC | + |
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Preference number: 6 (lower is better) Translates to: PATTAVQVTQHDSCC*VCTVWSRRQQHVHT Trigger: GGTGTGCACATGCTGCTGCCGGCGGGACCACACGGTGCAGACCAAGCAGCAGGAATCATGCTGCGTGACCTGGACGGCGGTGGTGGCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CAA 90 bp | GCACTGGCTGCCAAGGCCGCTGCTGTAGCTGCAGAAACTGTGCAGTaGCCCCCTCGTGGGGTTATGGGCCGCGATGCGCCGAGCTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: ALAAKAAAVAAETVQ*PPRGVMGRDAPSLG Trigger: CCCCAAGCTCGGCGCATCGCGGCCCATAACCCCACGAGGGGGCAACTGCACAGTTTCTGCAGCTACAGCAGCGGCCTTGGCAGCCAGTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS TCA 72 bp | GAGCCCAGCCACCACCGCCGTCCAGGTCACGCAGCATaGTTCCTGCTGCTTGGTCTGCACCGTGTGGTCCCG | + |
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Preference number: 6 (lower is better) Translates to: EPSHHRRPGHAA*FLLLGLHRVVP Trigger: CGGGACCACACGGTGCAGACCAAGCAGCAGGAATCATGCTGCGTGACCTGGACGGCGGTGGTGGCTGGGCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS GCA 72 bp | ACCACCGCCGTCCAGGTCACGCAGCATGATTCCTGCTaGTTGGTCTGCACCGTGTGGTCCCGCCGGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: TTAVQVTQHDSC*LVCTVWSRRQQ Trigger: CTGCTGCCGGCGGGACCACACGGTGCAGACCAAGCAGCAGGAATCATGCTGCGTGACCTGGACGGCGGTGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CCA 72 bp | CCGCCGTCCAGGTCACGCAGCATGATTCCTGCTGCTTaGTCTGCACCGTGTGGTCCCGCCGGCAGCAGCATG | + |
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Preference number: 6 (lower is better) Translates to: PPSRSRSMIPAA*SAPCGPAGSSM Trigger: CATGCTGCTGCCGGCGGGACCACACGGTGCAGACCAAGCAGCAGGAATCATGCTGCGTGACCTGGACGGCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CAA 72 bp | GCCAAGGCCGCTGCTGTAGCTGCAGAAACTGTGCAGTaGCCCCCTCGTGGGGTTATGGGCCGCGATGCGCCG | + |
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Preference number: 6 (lower is better) Translates to: AKAAAVAAETVQ*PPRGVMGRDAP Trigger: CGGCGCATCGCGGCCCATAACCCCACGAGGGGGCAACTGCACAGTTTCTGCAGCTACAGCAGCGGCCTTGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CAA 72 bp | ACCGCCGTCCAGGTCACGCAGCATGATTCCTGCTGCTaGGTCTGCACCGTGTGGTCCCGCCGGCAGCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: TAVQVTQHDSCC*VCTVWSRRQQH Trigger: ATGCTGCTGCCGGCGGGACCACACGGTGCAGACCAAGCAGCAGGAATCATGCTGCGTGACCTGGACGGCGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS GCA 72 bp | GTCCAGGTCACGCAGCATGATTCCTGCTGCTTGGTCTaGACCGTGTGGTCCCGCCGGCAGCAGCATGTGCAC | + |
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Preference number: 6 (lower is better) Translates to: VQVTQHDSCCLV*TVWSRRQQHVH Trigger: GTGCACATGCTGCTGCCGGCGGGACCACACGGTGCAGACCAAGCAGCAGGAATCATGCTGCGTGACCTGGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CCA 72 bp | TGCTGTAGCTGCAGAAACTGTGCAGTTGCCCCCTCGTaGGGTTATGGGCCGCGATGCGCCGAGCTTGGGGGT | + |
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Preference number: 6 (lower is better) Translates to: CCSCRNCAVAPS*GYGPRCAELGG Trigger: ACCCCCAAGCTCGGCGCATCGCGGCCCATAACCCCACGAGGGGGCAACTGCACAGTTTCTGCAGCTACAGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS GCA 72 bp | GAAGGCTGCACTGGCTGCCAAGGCCGCTGCTGTAGCTaGAGAAACTGTGCAGTTGCCCCCTCGTGGGGTTAT | + |
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Preference number: 6 (lower is better) Translates to: EGCTGCQGRCCS*RNCAVAPSWGY Trigger: ATAACCCCACGAGGGGGCAACTGCACAGTTTCTGCAGCTACAGCAGCGGCCTTGGCAGCCAGTGCAGCCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS GCA 72 bp | GGTGTTCATCCGCCACGGACATGTAGGTGGGTCTCATaGTGGGAGAGTATGTGGGCGGAGGGGAACCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: GVHPPRTCRWVS*WESMWAEGNLS Trigger: GGAGAGGTTCCCCTCCGCCCACATACTCTCCCAGCATGAGACCCACCTACATGTCCGTGGCGGATGAACACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CCA 72 bp | GTGGTGACCTCCCTCCACACGGGCAGCCCCGAGAGCTaGCTGACGACATTGCCTGCCATCTGTTGCATAAAC | + |
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Preference number: 6 (lower is better) Translates to: VVTSLHTGSPES*LTTLPAICCIN Trigger: GTTTATGCAACAGATGGCAGGCAATGTCGTCAGCCAGCTCTCGGGGCTGCCCGTGTGGAGGGAGGTCACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CCA 72 bp | GTTCATCCGCCACGGACATGTAGGTGGGTCTCATGCTaGGAGAGTATGTGGGCGGAGGGGAACCTCTCCCGA | + |
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Preference number: 6 (lower is better) Translates to: VHPPRTCRWVSC*ESMWAEGNLSR Trigger: TCGGGAGAGGTTCCCCTCCGCCCACATACTCTCCCAGCATGAGACCCACCTACATGTCCGTGGCGGATGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS TCA 72 bp | AGAGCAGGCCCTCAATGCCATCATAGCAGATGCCAGTaGGGGCGTCTAGGTAGTCCTTGTGCAGCCCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: RAGPQCHHSRCQ*GRLGSPCAALG Trigger: GCCGAGGGCTGCACAAGGACTACCTAGACGCCCTCACTGGCATCTGCTATGATGGCATTGAGGGCCTGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CCA 72 bp | CCTGGTTCATGTACTCAGAGACTGGGGCATTGGAGATaGTCTGGGAGGGAGGCTGAAGGCTGCACTGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: PGSCTQRLGHWR*SGREAEGCTGC Trigger: GCAGCCAGTGCAGCCTTCAGCCTCCCTCCCAGACCATCTCCAATGCCCCAGTCTCTGAGTACATGAACCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CCA 72 bp | AGTGTCTCAGGTGTTCATCCGCCACGGACATGTAGGTaGGTCTCATGCTGGGAGAGTATGTGGGCGGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: SVSGVHPPRTCR*VSCWESMWAEG Trigger: CCCCTCCGCCCACATACTCTCCCAGCATGAGACCCACCTACATGTCCGTGGCGGATGAACACCTGAGACACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CAA 72 bp | CTCCACACGGGCAGCCCCGAGAGCTGGCTGACGACATaGCCTGCCATCTGTTGCATAAACTTCAGGGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: LHTGSPESWLTT*PAICCINFRVW Trigger: CCAGACCCTGAAGTTTATGCAACAGATGGCAGGCAATGTCGTCAGCCAGCTCTCGGGGCTGCCCGTGTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CAA 72 bp | AGTATTCCACAGCACAGCATGGAGGCTAGGAGACACTaGGACCGCCTGGCCAGTCCCAGGCAGGTGACAAGG | + |
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Preference number: 6 (lower is better) Translates to: SIPQHSMEARRH*DRLASPRQVTR Trigger: CCTTGTCACCTGCCTGGGACTGGCCAGGCGGTCCAAGTGTCTCCTAGCCTCCATGCTGTGCTGTGGAATACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CAA 90 bp | CACGGGCAGCCCCGAGAGCTGGCTGACGACATTGCCTGCCATCTGTaGCATAAACTTCAGGGTCTGGATGTAGTCACCCCGGGCAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: HGQPRELADDIACHL*HKLQGLDVVTPGSN Trigger: ATTGCTGCCCGGGGTGACTACATCCAGACCCTGAAGTTTATGCAACAGATGGCAGGCAATGTCGTCAGCCAGCTCTCGGGGCTGCCCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CAA 90 bp | ATCAGGGTCAGTATTCCACAGCACAGCATGGAGGCTAGGAGACACTaGGACCGCCTGGCCAGTCCCAGGCAGGTGACAAGGCAGATGACC | + |
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Preference number: 6 (lower is better) Translates to: IRVSIPQHSMEARRH*DRLASPRQVTRQMT Trigger: GGTCATCTGCCTTGTCACCTGCCTGGGACTGGCCAGGCGGTCCAAGTGTCTCCTAGCCTCCATGCTGTGCTGTGGAATACTGACCCTGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS TCA 72 bp | TGGGGTTATGGGCCGCGATGCGCCGAGCTTGGGGGTTaGAAGGGTCATCGTCGTCGATGTCATCATAATCTC | + |
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Preference number: 6 (lower is better) Translates to: WGYGPRCAELGG*KGHRRRCHHNL Trigger: GAGATTATGATGACATCGACGACGATGACCCTTTCAACCCCCAAGCTCGGCGCATCGCGGCCCATAACCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS TCA 72 bp | TGGGAGAGTATGTGGGCGGAGGGGAACCTCTCCCGATaGGTGGCACATTTTCGTATCGTGGGTTCCCACCAA | + |
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Preference number: 6 (lower is better) Translates to: WESMWAEGNLSR*VAHFRIVGSHQ Trigger: TTGGTGGGAACCCACGATACGAAAATGTGCCACTCATCGGGAGAGGTTCCCCTCCGCCCACATACTCTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CCA 72 bp | CCTCCAACCTGGATCTGCATGGTGGTCAATGAGCGCTaGAAGGTGGTCAGTGACTGCTGGAACGGGCTGATT | + |
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Preference number: 6 (lower is better) Translates to: PPTWICMVVNER*KVVSDCWNGLI Trigger: AATCAGCCCGTTCCAGCAGTCACTGACCACCTTCCAGCGCTCATTGACCACCATGCAGATCCAGGTTGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CCA 72 bp | TTGTGCAGCCCTCGGCAATCCAACATGGCGGTCAACTaGTGCAGGCTGATCTCGGAGTTGTTTAGCAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: LCSPRQSNMAVN*CRLISELFSRS Trigger: GCTTCTGCTAAACAACTCCGAGATCAGCCTGCACCAGTTGACCGCCATGTTGGATTGCCGAGGGCTGCACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CCA 72 bp | AGAGTATGTGGGCGGAGGGGAACCTCTCCCGATGAGTaGCACATTTTCGTATCGTGGGTTCCCACCAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: RVCGRRGTSPDE*HIFVSWVPTKE Trigger: CTCTTTGGTGGGAACCCACGATACGAAAATGTGCCACTCATCGGGAGAGGTTCCCCTCCGCCCACATACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS TCA 72 bp | CTCGGCAATCCAACATGGCGGTCAACTGGTGCAGGCTaGTCTCGGAGTTGTTTAGCAGAAGCTGGATGCCAA | + |
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Preference number: 6 (lower is better) Translates to: LGNPTWRSTGAG*SRSCLAEAGCQ Trigger: TTGGCATCCAGCTTCTGCTAAACAACTCCGAGATCAGCCTGCACCAGTTGACCGCCATGTTGGATTGCCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CAA 90 bp | CGGCAATCCAACATGGCGGTCAACTGGTGCAGGCTGATCTCGGAGTaGTTTAGCAGAAGCTGGATGCCAAGAAGGTCTTTCTCTGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: RQSNMAVNWCRLISE*FSRSWMPRRSFSAV Trigger: TACAGCAGAGAAAGACCTTCTTGGCATCCAGCTTCTGCTAAACAACTCCGAGATCAGCCTGCACCAGTTGACCGCCATGTTGGATTGCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS TCA 72 bp | GACTGCAATGGAGGTAGTACCGGGTCACCTCTGAGTTaGTCTGGCTCCCTGTGTTGTTCAGGATGTAGATGT | + |
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Preference number: 6 (lower is better) Translates to: DCNGGSTGSPLS*SGSLCCSGCRC Trigger: ACATCTACATCCTGAACAACACAGGGAGCCAGATCAACTCAGAGGTGACCCGGTACTACCTCCATTGCAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CCA 72 bp | TGGTGCAGGCTGATCTCGGAGTTGTTTAGCAGAAGCTaGATGCCAAGAAGGTCTTTCTCTGCTGTAGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: WCRLISELFSRS*MPRRSFSAVGK Trigger: CTTCCCTACAGCAGAGAAAGACCTTCTTGGCATCCAGCTTCTGCTAAACAACTCCGAGATCAGCCTGCACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CCA 72 bp | GCACATTTTCGTATCGTGGGTTCCCACCAAAGAGTATaGCCTGGTTCATGTACTCAGAGACTGGGGCATTGG | + |
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Preference number: 6 (lower is better) Translates to: AHFRIVGSHQRV*PGSCTQRLGHW Trigger: CCAATGCCCCAGTCTCTGAGTACATGAACCAGGCCATACTCTTTGGTGGGAACCCACGATACGAAAATGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CAA 72 bp | GGTGCTGTTCTAGGTCTACCTTCATCCTCTGGGTGTTaGCAGACACCAGCTCATCCATTCCAGAGAAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: GAVLGLPSSSGC*QTPAHPFQRRC Trigger: ACACCTTCTCTGGAATGGATGAGCTGGTGTCTGCAAACACCCAGAGGATGAAGGTAGACCTAGAACAGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CAA 72 bp | AACATGGCGGTCAACTGGTGCAGGCTGATCTCGGAGTaGTTTAGCAGAAGCTGGATGCCAAGAAGGTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: NMAVNWCRLISE*FSRSWMPRRSF Trigger: GAAAGACCTTCTTGGCATCCAGCTTCTGCTAAACAACTCCGAGATCAGCCTGCACCAGTTGACCGCCATGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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| CDS CCA 72 bp | TTTTCGTATCGTGGGTTCCCACCAAAGAGTATGGCCTaGTTCATGTACTCAGAGACTGGGGCATTGGAGATG | + |
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Preference number: 6 (lower is better) Translates to: FSYRGFPPKSMA*FMYSETGALEM Trigger: CATCTCCAATGCCCCAGTCTCTGAGTACATGAACCAGGCCATACTCTTTGGTGGGAACCCACGATACGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045779.6 |
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