Pregenerated sensors for TTYH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030428Ensembl transcript IDs: ENSMUST00000032594.13, ENSMUST00000079415.12, ENSMUST00000119661.8, ENSMUST00000129423.8, ENSMUST00000153673.8, ENSMUST00000206869.2, ENSMUST00000206987.2
Found 286 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGCTCAGGGACACTCCTTGCCAGAAGGCCAGTCCTTGCAGGTACTaGGCAGCAGCTTCAGCCTGCCTTCGGGCTCCCCTGGTGGCAGCC | + |
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Preference number: 1 (lower is better) Translates to: GLRDTPCQKASPCRY*AAASACLRAPLVAA Trigger: GGCTGCCACCAGGGGAGCCCGAAGGCAGGCTGAAGCTGCTGCTCAGTACCTGCAAGGACTGGCCTTCTGGCAAGGAGTGTCCCTGAGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032594.13 ENSMUST00000153673.8 |
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| 3UTR CCA 90 bp | GCAGGTACTGAGCAGCAGCTTCAGCCTGCCTTCGGGCTCCCCTGGTaGCAGCCACCAGCTCCATGCGGACTGACAGCACTTCCTCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: AGTEQQLQPAFGLPW*QPPAPCGLTALPPG Trigger: CCCTGGAGGAAGTGCTGTCAGTCCGCATGGAGCTGGTGGCTGCCACCAGGGGAGCCCGAAGGCAGGCTGAAGCTGCTGCTCAGTACCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032594.13 ENSMUST00000153673.8 |
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| 3UTR TCA 90 bp | TGCCTCCAGCTTCATCCCTCCAAGGACAGGACTGGCAGCCAGAGGTaGGGAACACCAGGCTGTATAGGTCAGCCCCCTTCCCAGCCACCC | + |
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Preference number: 1 (lower is better) Translates to: CLQLHPSKDRTGSQR*GTPGCIGQPPSQPP Trigger: GGGTGGCTGGGAAGGGGGCTGACCTATACAGCCTGGTGTTCCTCACCTCTGGCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
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| 3UTR GCA 90 bp | GTTTCCAGCACCACGTCATCGATGGTGCTGAGCGTGTGGTTGGCGTaGAGCAGTGCTGAGCTGAGCTGGGACACCCCATCGCTGGTCTCG | + |
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Preference number: 1 (lower is better) Translates to: VSSTTSSMVLSVWLA*SSAELSWDTPSLVS Trigger: CGAGACCAGCGATGGGGTGTCCCAGCTCAGCTCAGCACTGCTGCACGCCAACCACACGCTCAGCACCATCGATGACGTGGTGCTGGAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206987.2 |
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| 3UTR CCA 90 bp | CTCTCCACCGTTTCCAGCACCACGTCATCGATGGTGCTGAGCGTGTaGTTGGCGTGCAGCAGTGCTGAGCTGAGCTGGGACACCCCATCG | + |
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Preference number: 1 (lower is better) Translates to: LSTVSSTTSSMVLSV*LACSSAELSWDTPS Trigger: CGATGGGGTGTCCCAGCTCAGCTCAGCACTGCTGCACGCCAACCACACGCTCAGCACCATCGATGACGTGGTGCTGGAAACGGTGGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206987.2 |
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| 3UTR CCA 90 bp | TGGCAGCCACCAGCTCCATGCGGACTGACAGCACTTCCTCCAGGGTaGTCAGCTCCGTCTTCACTGCCTCACCCAGCCTCTCCACCGTTT | + |
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Preference number: 1 (lower is better) Translates to: WQPPAPCGLTALPPG*SAPSSLPHPASPPF Trigger: AAACGGTGGAGAGGCTGGGTGAGGCAGTGAAGACGGAGCTGACCACCCTGGAGGAAGTGCTGTCAGTCCGCATGGAGCTGGTGGCTGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206987.2 |
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| 3UTR CCA 90 bp | ACGTGCCTGTACCTGCCTCCAGCTTCATCCCTCCAAGGACAGGACTaGCAGCCAGAGGTGAGGAACACCAGGCTGTATAGGTCAGCCCCC | + |
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Preference number: 1 (lower is better) Translates to: TCLYLPPASSLQGQD*QPEVRNTRLYRSAP Trigger: GGGGGCTGACCTATACAGCCTGGTGTTCCTCACCTCTGGCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGGCAGGTACAGGCACGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
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| 3UTR GCA 90 bp | TTGAGATCGCTGGGGTATGGCAGGAAACAGGGACGTGCCTGTACCTaGCTCCAGCTTCATCCCTCCAAGGACAGGACTGGCAGCCAGAGG | + |
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Preference number: 1 (lower is better) Translates to: LRSLGYGRKQGRACT*LQLHPSKDRTGSQR Trigger: CCTCTGGCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGGCAGGTACAGGCACGTCCCTGTTTCCTGCCATACCCCAGCGATCTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
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| 3UTR GCA 90 bp | CTTCACACAGGCCTCGGAGTGCTGAGCCATAGTCCTTGTGCAGACTaGGGCAGTGCAGCAGCGCCACCAACTGGTGGAAGCTTCTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: LHTGLGVLSHSPCAD*GSAAAPPTGGSFFL Trigger: CAGAAAGAAGCTTCCACCAGTTGGTGGCGCTGCTGCACTGCCGCAGTCTGCACAAGGACTATGGCTCAGCACTCCGAGGCCTGTGTGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032594.13 |
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| 3UTR CCA 90 bp | CAAAGGAAGCGGGAAACGCGTCGCTTGAGGAATGGGAGTAGCCACTaGACTGTGACGCTGGAAAGGTACCTTGTAGGGTGTTGGGATGGT | + |
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Preference number: 1 (lower is better) Translates to: QRKRETRRLRNGSSH*TVTLERYLVGCWDG Trigger: ACCATCCCAACACCCTACAAGGTACCTTTCCAGCGTCACAGTCCAGTGGCTACTCCCATTCCTCAAGCGACGCGTTTCCCGCTTCCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
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| 3UTR TCA 90 bp | CATTGTGCAAGAACCAGGGATACCCCTGGTGCTTCTGTAGTCACTTaGGGACCCTGCTCTGCCATCTCCCCTACAGAGCTGCTGGTCTTT | + |
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Preference number: 1 (lower is better) Translates to: HCARTRDTPGASVVT*GPCSAISPTELLVF Trigger: AAAGACCAGCAGCTCTGTAGGGGAGATGGCAGAGCAGGGTCCTCAAGTGACTACAGAAGCACCAGGGGTATCCCTGGTTCTTGCACAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
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| 3UTR CCA 90 bp | TTGAGGACCCTGCTCTGCCATCTCCCCTACAGAGCTGCTGGTCTTTaGGAAGAGTCCCACTGTGGCAGATTAGTTTTGTCTCCAGCGTTT | + |
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Preference number: 1 (lower is better) Translates to: LRTLLCHLPYRAAGL*EESHCGRLVLSPAF Trigger: AAACGCTGGAGACAAAACTAATCTGCCACAGTGGGACTCTTCCCAAAGACCAGCAGCTCTGTAGGGGAGATGGCAGAGCAGGGTCCTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
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| 3UTR TCA 90 bp | CTGGACTGTGACGCTGGAAAGGTACCTTGTAGGGTGTTGGGATGGTaGGATCTGCTCGGAGTGGCAGCTAGCAGAACTGTATCTTTTAGG | + |
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Preference number: 1 (lower is better) Translates to: LDCDAGKVPCRVLGW*DLLGVAASRTVSFR Trigger: CCTAAAAGATACAGTTCTGCTAGCTGCCACTCCGAGCAGATCTCACCATCCCAACACCCTACAAGGTACCTTTCCAGCGTCACAGTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
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| 3UTR TCA 90 bp | TTCCTAAACCCAGCAGGCTTTGTACATTCCACGGGACTGGAAGCTTaGCTGTTCCTGTGGCTGCACGCCTGTTTAGATTTAGTGCTAGGC | + |
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Preference number: 1 (lower is better) Translates to: FLNPAGFVHSTGLEA*LFLWLHACLDLVLG Trigger: GCCTAGCACTAAATCTAAACAGGCGTGCAGCCACAGGAACAGTCAAGCTTCCAGTCCCGTGGAATGTACAAAGCCTGCTGGGTTTAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
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| 3UTR CCA 90 bp | TGCTCGGAGTGGCAGCTAGCAGAACTGTATCTTTTAGGATCAGGATaGCCCTGGAACTCAGAAACCCGCCTCCCTCTTAATGGGATTAAG | + |
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Preference number: 1 (lower is better) Translates to: CSEWQLAELYLLGSG*PWNSETRLPLNGIK Trigger: CTTAATCCCATTAAGAGGGAGGCGGGTTTCTGAGTTCCAGGGCCATCCTGATCCTAAAAGATACAGTTCTGCTAGCTGCCACTCCGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
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| 3UTR TCA 90 bp | CCCTTTTATTTCAAATCAGCCCTCTTCCAAGTTAGTGCCATAGGTTaGGATCGCTGGGGTATGGCAGGAAACAGGGACGTGCCTGTACCT | + |
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Preference number: 1 (lower is better) Translates to: PFYFKSALFQVSAIG*DRWGMAGNRDVPVP Trigger: AGGTACAGGCACGTCCCTGTTTCCTGCCATACCCCAGCGATCTCAACCTATGGCACTAACTTGGAAGAGGGCTGATTTGAAATAAAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
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| 3UTR TCA 90 bp | CCCCTTGTCAGGATTCACATGTTACTTATAGAAGCAATGCAGTGCTaGGCCTGGACAAGAGGAGAGTTGCCTTTCAACCACCAGAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: PLVRIHMLLIEAMQC*AWTRGELPFNHQRR Trigger: CCTCCTCTGGTGGTTGAAAGGCAACTCTCCTCTTGTCCAGGCTCAGCACTGCATTGCTTCTATAAGTAACATGTGAATCCTGACAAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000129423.8 |
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| 3UTR GCA 90 bp | CACGCCTGTTTAGATTTAGTGCTAGGCTTATTCTCTTCCGGTATCTaGTTCTTCCCCCTTGTCAGGATTCACATGTTACTTATAGAAGCA | + |
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Preference number: 1 (lower is better) Translates to: HACLDLVLGLFSSGI*FFPLVRIHMLLIEA Trigger: TGCTTCTATAAGTAACATGTGAATCCTGACAAGGGGGAAGAAGCAGATACCGGAAGAGAATAAGCCTAGCACTAAATCTAAACAGGCGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
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| 3UTR GCA 90 bp | TTCTTTCTGGAAGCTGGTCCCTCAAAGGATTACCAGGATAAGAGATaGAGTTTTTATCCTCTCACATGTAAGCATATTTATGTTTGTTTA | + |
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Preference number: 1 (lower is better) Translates to: FFLEAGPSKDYQDKR*SFYPLTCKHIYVCL Trigger: TAAACAAACATAAATATGCTTACATGTGAGAGGATAAAAACTGCATCTCTTATCCTGGTAATCCTTTGAGGGACCAGCTTCCAGAAAGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
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| 3UTR GCA 90 bp | AAGTTTACAGAAATTACAAAAGTAATACAGGAATTGGGCACACTATaGCCAGTTTCCCCTATTGCTAGATTCCACACCTCAAATTCATTT | + |
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Preference number: 1 (lower is better) Translates to: KFTEITKVIQELGTL*PVSPIARFHTSNSF Trigger: AAATGAATTTGAGGTGTGGAATCTAGCAATAGGGGAAACTGGGCATAGTGTGCCCAATTCCTGTATTACTTTTGTAATTTCTGTAAACTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
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| 3UTR-3UTR CCA 90 bp | GCCACCTGTACGGGGCTCAGGGACACTCCTTGCCAGAAGGCCAGTCCTTGCAGGGCCTTCGGGCTCCCCTaGTGGCAGCCACCAGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: ATCTGLRDTPCQKASPCRAFGLP*WQPPAP Trigger: TGGAGCTGGTGGCTGCCACCAGGGGAGCCCGAAGGC...CCTGCAAGGACTGGCCTTCTGGCAAGGAGTGTCCCTGAGCCCCGTACAGGTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032594.13 ENSMUST00000153673.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGCTCCATGCGGACTGACAGCACTTCCTCCAGGGTGGTCAGCTCCGTCTTCAGGCGTGCAGCAGTGCTaGGCTGAGCTGGGACACCCC | + |
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Preference number: 2 (lower is better) Translates to: PAPCGLTALPPGWSAPSSGVQQC*AELGHP Trigger: GGGGTGTCCCAGCTCAGCTCAGCACTGCTGCACGCC...TGAAGACGGAGCTGACCACCCTGGAGGAAGTGCTGTCAGTCCGCATGGAGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206987.2 |
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| 3UTR CAA 90 bp | CACCTGTACGGGGCTCAGGGACACTCCTTGCCAGAAGGCCAGTCCTaGCAGGTACTGAGCAGCAGCTTCAGCCTGCCTTCGGGCTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: HLYGAQGHSLPEGQS*QVLSSSFSLPSGSP Trigger: AGGGGAGCCCGAAGGCAGGCTGAAGCTGCTGCTCAGTACCTGCAAGGACTGGCCTTCTGGCAAGGAGTGTCCCTGAGCCCCGTACAGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032594.13 ENSMUST00000153673.8 |
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| 3UTR CAA 90 bp | TCCACCGTTTCCAGCACCACGTCATCGATGGTGCTGAGCGTGTGGTaGGCGTGCAGCAGTGCTGAGCTGAGCTGGGACACCCCATCGCTG | + |
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Preference number: 2 (lower is better) Translates to: STVSSTTSSMVLSVW*ACSSAELSWDTPSL Trigger: CAGCGATGGGGTGTCCCAGCTCAGCTCAGCACTGCTGCACGCCAACCACACGCTCAGCACCATCGATGACGTGGTGCTGGAAACGGTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206987.2 |
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| 3UTR-3UTR TCA 90 bp | CCATGCGGACTGACAGCACTTCCTCCAGGGTGGTCAGCTCCGTCTTCACTGCCTCGTCATCGATGGTGCTaGGCGTGTGGTTGGCGTGCA | + |
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Preference number: 2 (lower is better) Translates to: PCGLTALPPGWSAPSSLPRHRWC*ACGWRA Trigger: TGCACGCCAACCACACGCTCAGCACCATCGATGACG...AGGCAGTGAAGACGGAGCTGACCACCCTGGAGGAAGTGCTGTCAGTCCGCATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206987.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGCCTCACCCAGCCTCTCCACCGTTTCCAGCACCACGTCATCGATGGTGCTGAGCGTGTGGTTGGCGTaGAGCAGTGCTGAGCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: TASPSLSTVSSTTSSMVLSVWLA*SSAELS Trigger: GCTCAGCTCAGCACTGCTGCACGCCAACCACACGCT...CAGCACCATCGATGACGTGGTGCTGGAAACGGTGGAGAGGCTGGGTGAGGCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206987.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGACATAGGCCAGCCACCTGTACTCCTCCACGAAAGTCACATCTTCAGCCACGCCTTCGGGCTCCCCTaGTGGCAGCCACCAGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: EDIGQPPVLLHESHIFSHAFGLP*WQPPAP Trigger: TGGAGCTGGTGGCTGCCACCAGGGGAGCCCGAAGGC...GTGGCTGAAGATGTGACTTTCGTGGAGGAGTACAGGTGGCTGGCCTATGTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032594.13 ENSMUST00000153673.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCTGCCATCTCCCCTACAGAGCTGCTGGTCTTTGGGAAGAGTCCCACTGTGGCTTCCCAGCCACCCCTaGTCCCTGTTGTGCCACCTC | + |
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Preference number: 2 (lower is better) Translates to: ALPSPLQSCWSLGRVPLWLPSHP*SLLCHL Trigger: GAGGTGGCACAACAGGGACCAGGGGTGGCTGGGAAG...CCACAGTGGGACTCTTCCCAAAGACCAGCAGCTCTGTAGGGGAGATGGCAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
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| 3UTR-3UTR CCA 90 bp | TGCGGACTGACAGCACTTCCTCCAGGGTGGTCAGCTCCGTCTTCACTGCCTCACAGTGCTGAGCTGAGCTaGGACACCCCATCGCTGGTC | + |
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Preference number: 2 (lower is better) Translates to: CGLTALPPGWSAPSSLPHSAELS*DTPSLV Trigger: GACCAGCGATGGGGTGTCCCAGCTCAGCTCAGCACT...GTGAGGCAGTGAAGACGGAGCTGACCACCCTGGAGGAAGTGCTGTCAGTCCGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206987.2 |
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| 3UTR-3UTR TCA 90 bp | ACACGCCGTCACACGCCGTTAATCTCCTCACTAGGGAGGCAGAGGCTGAGGCAGCCAGGCCCAGGAGGGTaGAGAGACAAACCAGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: TRRHTPLISSLGRQRLRQPGPGG*RDKPEA Trigger: TGCTTCTGGTTTGTCTCTTCACCCTCCTGGGCCTGG...CTGCCTCAGCCTCTGCCTCCCTAGTGAGGAGATTAACGGCGTGTGACGGCGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032594.13 |
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| 3UTR-3UTR TCA 90 bp | ACACGCCGTCACACGCCGTTAATCTCCTCACTAGGGAGGCAGAGGCTGAGGCAGACGGGACTGGAAGCTTaGCTGTTCCTGTGGCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: TRRHTPLISSLGRQRLRQTGLEA*LFLWLH Trigger: GTGCAGCCACAGGAACAGTCAAGCTTCCAGTCCCGT...CTGCCTCAGCCTCTGCCTCCCTAGTGAGGAGATTAACGGCGTGTGACGGCGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
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| 3UTR-3UTR GCA 90 bp | CACTGCCTCACCCAGCCTCTCCACCGTTTCCAGCACCACGTCATCGATGGTGCTCAGCCACCAGCTCCATaGGGACTGACAGCACTTCCT | + |
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Preference number: 2 (lower is better) Translates to: HCLTQPLHRFQHHVIDGAQPPAP*GLTALP Trigger: AGGAAGTGCTGTCAGTCCGCATGGAGCTGGTGGCTG...AGCACCATCGATGACGTGGTGCTGGAAACGGTGGAGAGGCTGGGTGAGGCAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206987.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCTGGGCCTCCAGACCAGCACCAGCCCACACTCCACTCTAAATCCCACAACAGGACGTGCCTGTACCTaGCTCCAGCTTCATCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: SLGLQTSTSPHSTLNPTTGRACT*LQLHPS Trigger: GGAGGGATGAAGCTGGAGGCAGGTACAGGCACGTCC...TGTTGTGGGATTTAGAGTGGAGTGTGGGCTGGTGCTGGTCTGGAGGCCCAGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000129423.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGCTCCATGCGGACTGACAGCACTTCCTCCAGGGTGGTCAGCTCCGTCTTCAATGGTGCTGAGCGTGTaGTTGGCGTGCAGCAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: PAPCGLTALPPGWSAPSSMVLSV*LACSSA Trigger: AGCACTGCTGCACGCCAACCACACGCTCAGCACCAT...TGAAGACGGAGCTGACCACCCTGGAGGAAGTGCTGTCAGTCCGCATGGAGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206987.2 |
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| 3UTR-3UTR TCA 90 bp | CGTCACACGCCGTTAATCTCCTCACTAGGGAGGCAGAGGCTGAGGCAGGCTCTTAGTCCTTGCAGGTACTaGGCAGCAGCTTCAGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: RHTPLISSLGRQRLRQALSPCRY*AAASAC Trigger: GCAGGCTGAAGCTGCTGCTCAGTACCTGCAAGGACT...AAGAGCCTGCCTCAGCCTCTGCCTCCCTAGTGAGGAGATTAACGGCGTGTGACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032594.13 |
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| 3UTR-3UTR GCA 90 bp | AGTCTCTGGGCAGCATATTTAGAGAACCTGTTCCCTGGGCCTCCAGACCAGCACTGCAGACTGCGGCAGTaGAGCAGCGCCACCAACTGG | + |
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Preference number: 2 (lower is better) Translates to: SLWAAYLENLFPGPPDQHCRLRQ*SSATNW Trigger: CCAGTTGGTGGCGCTGCTGCACTGCCGCAGTCTGCA...GTGCTGGTCTGGAGGCCCAGGGAACAGGTTCTCTAAATATGCTGCCCAGAGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032594.13 |
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| 3UTR-3UTR TCA 90 bp | CCTGTACCTGCCTCCAGCTTCATCCCTCCAAGGACAGGACTGGCAGCCAGAGGTGGTTGCCATCCTAAGTaGGATGTCCATAGCCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: PVPASSFIPPRTGLAARGGCHPK*DVHSQQ Trigger: CTGCTGGCTATGGACATCTCACTTAGGATGGCAACC...ACCTCTGGCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGGCAGGTACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
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| 3UTR-3UTR GCA 90 bp | GTACTCCTCCACGAAAGTCACATCTTCAGCCACCTGTACGGGGCTCAGGGACACCAGCCACCAGCTCCATaGGGACTGACAGCACTTCCT | + |
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Preference number: 2 (lower is better) Translates to: VLLHESHIFSHLYGAQGHQPPAP*GLTALP Trigger: AGGAAGTGCTGTCAGTCCGCATGGAGCTGGTGGCTG...GTGTCCCTGAGCCCCGTACAGGTGGCTGAAGATGTGACTTTCGTGGAGGAGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032594.13 ENSMUST00000153673.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGTACCTGCCTCCAGCTTCATCCCTCCAAGGACAGGACTGGCAGCCAGAGGTGCACCAGGAGACTCATaGCAGTCATCACAACCACCA | + |
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Preference number: 2 (lower is better) Translates to: PVPASSFIPPRTGLAARGAPGDS*QSSQPP Trigger: TGGTGGTTGTGATGACTGCCATGAGTCTCCTGGTGC...ACCTCTGGCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGGCAGGTACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032594.13 |
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| 3UTR-3UTR TCA 90 bp | GCTGGTGATTCACAGTCTCTGGGCAGCATATTTAGAGAACCTGTTCCCTGGGCCTCCAGGCCCTGCAGCTaGGAGTGGATGCTGGCTAGA | + |
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Preference number: 2 (lower is better) Translates to: AGDSQSLGSIFREPVPWASRPCS*EWMLAR Trigger: TCTAGCCAGCATCCACTCTCAGCTGCAGGGCCTGGA...GGCCCAGGGAACAGGTTCTCTAAATATGCTGCCCAGAGACTGTGAATCACCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032594.13 |
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| 3UTR-3UTR CCA 90 bp | TTGTACATTCCACGGGACTGGAAGCTTGACTGTTCCTGTGGCTGCACGCCTGTTCTGGCTAGAGCACGCTaGGACAGCGTCAGCCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: LYIPRDWKLDCSCGCTPVLARAR*DSVSLC Trigger: ACAGAGGCTGACGCTGTCCCAGCGTGCTCTAGCCAG...AACAGGCGTGCAGCCACAGGAACAGTCAAGCTTCCAGTCCCGTGGAATGTACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032594.13 |
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| 3UTR CAA 90 bp | GCATTGTGCAAGAACCAGGGATACCCCTGGTGCTTCTGTAGTCACTaGAGGACCCTGCTCTGCCATCTCCCCTACAGAGCTGCTGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: ALCKNQGYPWCFCSH*RTLLCHLPYRAAGL Trigger: AAGACCAGCAGCTCTGTAGGGGAGATGGCAGAGCAGGGTCCTCAAGTGACTACAGAAGCACCAGGGGTATCCCTGGTTCTTGCACAATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
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| 3UTR CAA 90 bp | CTTGAGGACCCTGCTCTGCCATCTCCCCTACAGAGCTGCTGGTCTTaGGGAAGAGTCCCACTGTGGCAGATTAGTTTTGTCTCCAGCGTT | + |
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Preference number: 2 (lower is better) Translates to: LEDPALPSPLQSCWS*GRVPLWQISFVSSV Trigger: AACGCTGGAGACAAAACTAATCTGCCACAGTGGGACTCTTCCCAAAGACCAGCAGCTCTGTAGGGGAGATGGCAGAGCAGGGTCCTCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
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| 3UTR-3UTR GCA 90 bp | AACACTTTAGTTGGGTGTGGTGATACACGCCGTCACACGCCGTTAATCTCCTCACTCAGGGACACTCCTTaGCAGAAGGCCAGTCCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: NTLVGCGDTRRHTPLISSLRDTP*QKASPC Trigger: GCAAGGACTGGCCTTCTGGCAAGGAGTGTCCCTGAG...TGAGGAGATTAACGGCGTGTGACGGCGTGTATCACCACACCCAACTAAAGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032594.13 |
||
| 3UTR-3UTR GCA 90 bp | AGTCTCTGGGCAGCATATTTAGAGAACCTGTTCCCTGGGCCTCCAGACCAGCACGCTCAGATGGAAGACTaGCACTGCACAAAGCGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: SLWAAYLENLFPGPPDQHAQMED*HCTKRL Trigger: CAAACGCTTTGTGCAGTGGCAGTCTTCCATCTGAGC...GTGCTGGTCTGGAGGCCCAGGGAACAGGTTCTCTAAATATGCTGCCCAGAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032594.13 |
||
| 3UTR-3UTR CCA 90 bp | GATTCACAGTCTCTGGGCAGCATATTTAGAGAACCTGTTCCCTGGGCCTCCAGATCTGTTGGAAGGGGTTaGAGACCGCCTGGTTGCACA | + |
|
Preference number: 2 (lower is better) Translates to: DSQSLGSIFREPVPWASRSVGRG*RPPGCT Trigger: TGTGCAACCAGGCGGTCTCCAACCCCTTCCAACAGA...TCTGGAGGCCCAGGGAACAGGTTCTCTAAATATGCTGCCCAGAGACTGTGAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032594.13 |
||
| 3UTR-3UTR TCA 90 bp | CTGGTGATTCACAGTCTCTGGGCAGCATATTTAGAGAACCTGTTCCCTGGGCCTGGTTGCCATCCTAAGTaGGATGTCCATAGCCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LVIHSLWAAYLENLFPGPGCHPK*DVHSQQ Trigger: CTGCTGGCTATGGACATCTCACTTAGGATGGCAACC...AGGCCCAGGGAACAGGTTCTCTAAATATGCTGCCCAGAGACTGTGAATCACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000129423.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCTATTCTGATACAAGCGTTGGTTTTCTGGAGTCTTGTGCTGGGTGTGAGCTGGAAGCAATGCAGTGCTaGGCCATAGAGGAGAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: PYSDTSVGFLESCAGCELEAMQC*AIEERQ Trigger: CTGCCTCTCCTCTATGGCTCAGCACTGCATTGCTTC...CAGCTCACACCCAGCACAAGACTCCAGAAAACCAACGCTTGTATCAGAATAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119661.8 |
||
| 3UTR-3UTR CCA 90 bp | AACCTTCCCCCTTCATATCACCCTGGTGGCACTACAAGCAAATATTCTACTTTCCTTCCCAGCCACCCCTaGTCCCTGTTGTGCCACCTC | + |
|
Preference number: 2 (lower is better) Translates to: NLPPSYHPGGTTSKYSTFLPSHP*SLLCHL Trigger: GAGGTGGCACAACAGGGACCAGGGGTGGCTGGGAAG...GAAAGTAGAATATTTGCTTGTAGTGCCACCAGGGTGATATGAAGGGGGAAGGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000129423.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGGCTGCACGCCTGTTTAGATTTAGTGCTAGGCTTATTCTCTTCCGGTATCTGGAAGCAATGCAGTGCTaGGCCTGGACAAGAGGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: VAARLFRFSARLILFRYLEAMQC*AWTRGE Trigger: CTCTCCTCTTGTCCAGGCTCAGCACTGCATTGCTTC...CAGATACCGGAAGAGAATAAGCCTAGCACTAAATCTAAACAGGCGTGCAGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000129423.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCACAACAAATAGGTACTCGAAAGGGGAAAGTAGCACATTGTGTTTGCTAATCTGGAGCAGAAGTCACTaGGGCCCACAGCTGTGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: PTTNRYSKGESSTLCLLIWSRSH*GPQLWQ Trigger: CTGCCACAGCTGTGGGCCTCAGTGACTTCTGCTCCA...GATTAGCAAACACAATGTGCTACTTTCCCCTTTCGAGTACCTATTTGTTGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032594.13 |
||
| 3UTR-3UTR TCA 90 bp | TCCTGTCAAGAGCTGTTTATTGGGTTTATGATGCCCATTTGCTTTACCACACAAGAAGCAATGCAGTGCTaGGCCTGGACAAGAGGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: SCQELFIGFMMPICFTTQEAMQC*AWTRGE Trigger: CTCTCCTCTTGTCCAGGCTCAGCACTGCATTGCTTC...TTGTGTGGTAAAGCAAATGGGCATCATAAACCCAATAAACAGCTCTTGACAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTTCCTTAAACCTTCCCCCTTCATATCACCCTGGTGGCACTACAAGCAAATATCAGCACATAGGTGTCTaGGTTGGAGCAGAAGTCACT | + |
|
Preference number: 2 (lower is better) Translates to: SSLNLPPSYHPGGTTSKYQHIGV*VGAEVT Trigger: AGTGACTTCTGCTCCAACCCAGACACCTATGTGCTG...ATATTTGCTTGTAGTGCCACCAGGGTGATATGAAGGGGGAAGGTTTAAGGAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032594.13 |
||
| 3UTR-3UTR TCA 90 bp | AATAGGTACTCGAAAGGGGAAAGTAGCACATTGTGTTTGCTAATCATTAGAATTATAGCTGAGGATGTCTaGGCTGAGCCCTGTCTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: NRYSKGESSTLCLLIIRIIAEDV*AEPCLL Trigger: GAGGAGACAGGGCTCAGCTCAGACATCCTCAGCTAT...AATTCTAATGATTAGCAAACACAATGTGCTACTTTCCCCTTTCGAGTACCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032594.13 |
||
| 3UTR CAA 90 bp | TCCAGTCTCACATTGTACAAGCAACTTTTGGTAATTAAACAACACTaGGATAACTCTGTATCATTTGCTAGTGTTAGCTTGGTAGGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: SSLTLYKQLLVIKQH*DNSVSFASVSLVGF Trigger: GAAACCTACCAAGCTAACACTAGCAAATGATACAGAGTTATCCAAGTGTTGTTTAATTACCAAAAGTTGCTTGTACAATGTGAGACTGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
||
| 3UTR GCA 72 bp | CACTGGGTGGGAAGAGGGCCCAGGCGCGGGGCAGGCTaGACAGAGTGGTGGCTAGGGCCCCCGCAGACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: HWVGRGPRRGAG*TEWWLGPPQTG Trigger: TCCTGTCTGCGGGGGCCCTAGCCACCACTCTGTGCAGCCTGCCCCGCGCCTGGGCCCTCTTCCCACCCAGTG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032594.13 |
||
| 3UTR GCA 72 bp | GCCTTCGGGCTCCCCTGGTGGCAGCCACCAGCTCCATaGGGACTGACAGCACTTCCTCCAGGGTGGTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: AFGLPWWQPPAP*GLTALPPGWSA Trigger: AGCTGACCACCCTGGAGGAAGTGCTGTCAGTCCGCATGGAGCTGGTGGCTGCCACCAGGGGAGCCCGAAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032594.13 ENSMUST00000153673.8 |
||
| 3UTR TCA 72 bp | GATGGTGCTGAGCGTGTGGTTGGCGTGCAGCAGTGCTaGGCTGAGCTGGGACACCCCATCGCTGGTCTCGCT | + |
|
Preference number: 3 (lower is better) Translates to: DGAERVVGVQQC*AELGHPIAGLA Trigger: AGCGAGACCAGCGATGGGGTGTCCCAGCTCAGCTCAGCACTGCTGCACGCCAACCACACGCTCAGCACCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206987.2 |
||
| 3UTR GCA 72 bp | GGCCTCGGAGTGCTGAGCCATAGTCCTTGTGCAGACTaGGGCAGTGCAGCAGCGCCACCAACTGGTGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: GLGVLSHSPCAD*GSAAAPPTGGS Trigger: GCTTCCACCAGTTGGTGGCGCTGCTGCACTGCCGCAGTCTGCACAAGGACTATGGCTCAGCACTCCGAGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032594.13 |
||
| 3UTR GCA 72 bp | CAGCACTTCCTCCAGGGTGGTCAGCTCCGTCTTCACTaGCTCACCCAGCCTCTCCACCGTTTCCAGCACCAC | + |
|
Preference number: 3 (lower is better) Translates to: QHFLQGGQLRLH*LTQPLHRFQHH Trigger: GTGGTGCTGGAAACGGTGGAGAGGCTGGGTGAGGCAGTGAAGACGGAGCTGACCACCCTGGAGGAAGTGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206987.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGTACCTGCCTCCAGCTTCATCCCTCCAAGGACAGGACTGGCAGCCAGAGGTCCAGAAGGCCAGTCCTaGCAGGTACTGAGCAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PVPASSFIPPRTGLAARGPEGQS*QVLSSS Trigger: GCTGCTGCTCAGTACCTGCAAGGACTGGCCTTCTGG...ACCTCTGGCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGGCAGGTACAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032594.13 |
||
| 3UTR GCA 72 bp | CTGGGGTATGGCAGGAAACAGGGACGTGCCTGTACCTaGCTCCAGCTTCATCCCTCCAAGGACAGGACTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LGYGRKQGRACT*LQLHPSKDRTG Trigger: GCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGGCAGGTACAGGCACGTCCCTGTTTCCTGCCATACCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| 3UTR CCA 72 bp | GTTTCCAGCACCACGTCATCGATGGTGCTGAGCGTGTaGTTGGCGTGCAGCAGTGCTGAGCTGAGCTGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: VSSTTSSMVLSV*LACSSAELSWD Trigger: GTCCCAGCTCAGCTCAGCACTGCTGCACGCCAACCACACGCTCAGCACCATCGATGACGTGGTGCTGGAAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206987.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCAGCTTCATCCCTCCAAGGACAGGACTGGCAGCCAGAGGTGAGGAACACCACAACCACCAGCCATTaGCTCTGCTTTGCCAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: PPASSLQGQDWQPEVRNTTTTSH*LCFARP Trigger: GGGCCTGGCAAAGCAGAGCAAATGGCTGGTGGTTGT...GGTGTTCCTCACCTCTGGCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032594.13 |
||
| 3UTR-3UTR CAA 90 bp | TCCCTGGGCCTCCAGACCAGCACCAGCCCACACTCCACTCTAAATCCCACAACACTCTGTTGGAAGGGGTaGGAGACCGCCTGGTTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: SLGLQTSTSPHSTLNPTTLCWKG*ETAWLH Trigger: GTGCAACCAGGCGGTCTCCAACCCCTTCCAACAGAG...TGTTGTGGGATTTAGAGTGGAGTGTGGGCTGGTGCTGGTCTGGAGGCCCAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032594.13 |
||
| 3UTR TCA 72 bp | CTTCATCCCTCCAAGGACAGGACTGGCAGCCAGAGGTaGGGAACACCAGGCTGTATAGGTCAGCCCCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LHPSKDRTGSQR*GTPGCIGQPPS Trigger: GGAAGGGGGCTGACCTATACAGCCTGGTGTTCCTCACCTCTGGCTGCCAGTCCTGTCCTTGGAGGGATGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| 3UTR GCA 72 bp | AATTGGAAAGGCGCACCTGGCGTAGGGAACAGCGAGTaGGAACCAAAGGAAGCGGGAAACGCGTCGCTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: NWKGAPGVGNSE*EPKEAGNASLE Trigger: CTCAAGCGACGCGTTTCCCGCTTCCTTTGGTTCGCACTCGCTGTTCCCTACGCCAGGTGCGCCTTTCCAATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
||
| 3UTR CCA 72 bp | TACCTGCCTCCAGCTTCATCCCTCCAAGGACAGGACTaGCAGCCAGAGGTGAGGAACACCAGGCTGTATAGG | + |
|
Preference number: 3 (lower is better) Translates to: YLPPASSLQGQD*QPEVRNTRLYR Trigger: CCTATACAGCCTGGTGTTCCTCACCTCTGGCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGGCAGGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| 3UTR CCA 72 bp | CAGTCTCTGGGCAGCATATTTAGAGAACCTGTTCCCTaGGCCTCCAGACCAGCACCAGCCCACACTCCACTC | + |
|
Preference number: 3 (lower is better) Translates to: QSLGSIFREPVP*ASRPAPAHTPL Trigger: GAGTGGAGTGTGGGCTGGTGCTGGTCTGGAGGCCCAGGGAACAGGTTCTCTAAATATGCTGCCCAGAGACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| 3UTR TCA 72 bp | AGAACCAGGGATACCCCTGGTGCTTCTGTAGTCACTTaGGGACCCTGCTCTGCCATCTCCCCTACAGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RTRDTPGASVVT*GPCSAISPTEL Trigger: CAGCTCTGTAGGGGAGATGGCAGAGCAGGGTCCTCAAGTGACTACAGAAGCACCAGGGGTATCCCTGGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
||
| 3UTR GCA 72 bp | CTTGAGGACCCTGCTCTGCCATCTCCCCTACAGAGCTaGTGGTCTTTGGGAAGAGTCCCACTGTGGCAGATT | + |
|
Preference number: 3 (lower is better) Translates to: LEDPALPSPLQS*WSLGRVPLWQI Trigger: AATCTGCCACAGTGGGACTCTTCCCAAAGACCAGCAGCTCTGTAGGGGAGATGGCAGAGCAGGGTCCTCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
||
| 3UTR GCA 72 bp | CCCTGGTGCTTCTGTAGTCACTTGAGGACCCTGCTCTaGCATCTCCCCTACAGAGCTGCTGGTCTTTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: PWCFCSHLRTLL*HLPYRAAGLWE Trigger: TTCCCAAAGACCAGCAGCTCTGTAGGGGAGATGGCAGAGCAGGGTCCTCAAGTGACTACAGAAGCACCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
||
| 3UTR CCA 72 bp | TGTCTCCTCCTGGGTCAGGTTCAGCACATAGGTGTCTaGGTTGGAGCAGAAGTCACTGAGGCCCACAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: CLLLGQVQHIGV*VGAEVTEAHSC Trigger: ACAGCTGTGGGCCTCAGTGACTTCTGCTCCAACCCAGACACCTATGTGCTGAACCTGACCCAGGAGGAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032594.13 |
||
| 3UTR CCA 72 bp | TGCAGACTGCGGCAGTGCAGCAGCGCCACCAACTGGTaGAAGCTTCTTTCTGTCACATTCAGTGTCTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: CRLRQCSSATNW*KLLSVTFSVSS Trigger: GGAGGAGACACTGAATGTGACAGAAAGAAGCTTCCACCAGTTGGTGGCGCTGCTGCACTGCCGCAGTCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032594.13 |
||
| 3UTR TCA 72 bp | GACGCTGGAAAGGTACCTTGTAGGGTGTTGGGATGGTaGGATCTGCTCGGAGTGGCAGCTAGCAGAACTGTA | + |
|
Preference number: 3 (lower is better) Translates to: DAGKVPCRVLGW*DLLGVAASRTV Trigger: TACAGTTCTGCTAGCTGCCACTCCGAGCAGATCTCACCATCCCAACACCCTACAAGGTACCTTTCCAGCGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
||
| 3UTR CCA 72 bp | TCCAAACCAGCATTGTGCAAGAACCAGGGATACCCCTaGTGCTTCTGTAGTCACTTGAGGACCCTGCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SKPALCKNQGYP*CFCSHLRTLLC Trigger: GCAGAGCAGGGTCCTCAAGTGACTACAGAAGCACCAGGGGTATCCCTGGTTCTTGCACAATGCTGGTTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
||
| 3UTR CCA 72 bp | CTGCTCTGCCATCTCCCCTACAGAGCTGCTGGTCTTTaGGAAGAGTCCCACTGTGGCAGATTAGTTTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LLCHLPYRAAGL*EESHCGRLVLS Trigger: AGACAAAACTAATCTGCCACAGTGGGACTCTTCCCAAAGACCAGCAGCTCTGTAGGGGAGATGGCAGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCACAACAAATAGGTACTCGAAAGGGGAAAGTAGCACATTGTGTTTGCTAATCCAGCGTCAGCCTCTGTaGGAAGGGGTTGGAGACCGC | + |
|
Preference number: 3 (lower is better) Translates to: PTTNRYSKGESSTLCLLIQRQPL*EGVGDR Trigger: GCGGTCTCCAACCCCTTCCAACAGAGGCTGACGCTG...GATTAGCAAACACAATGTGCTACTTTCCCCTTTCGAGTACCTATTTGTTGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032594.13 |
||
| 3UTR TCA 72 bp | TTCAAATCAGCCCTCTTCCAAGTTAGTGCCATAGGTTaGGATCGCTGGGGTATGGCAGGAAACAGGGACGTG | + |
|
Preference number: 3 (lower is better) Translates to: FKSALFQVSAIG*DRWGMAGNRDV Trigger: CACGTCCCTGTTTCCTGCCATACCCCAGCGATCTCAACCTATGGCACTAACTTGGAAGAGGGCTGATTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| 3UTR TCA 72 bp | CCAGCAGGCTTTGTACATTCCACGGGACTGGAAGCTTaGCTGTTCCTGTGGCTGCACGCCTGTTTAGATTTA | + |
|
Preference number: 3 (lower is better) Translates to: PAGFVHSTGLEA*LFLWLHACLDL Trigger: TAAATCTAAACAGGCGTGCAGCCACAGGAACAGTCAAGCTTCCAGTCCCGTGGAATGTACAAAGCCTGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| 3UTR TCA 72 bp | AGGATTCACATGTTACTTATAGAAGCAATGCAGTGCTaGGCCATAGAGGAGAGGCAGGCTCCAGACTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: RIHMLLIEAMQC*AIEERQAPDWR Trigger: CCTCCAGTCTGGAGCCTGCCTCTCCTCTATGGCTCAGCACTGCATTGCTTCTATAAGTAACATGTGAATCCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119661.8 |
||
| 3UTR CCA 72 bp | TGGCAGCTAGCAGAACTGTATCTTTTAGGATCAGGATaGCCCTGGAACTCAGAAACCCGCCTCCCTCTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: WQLAELYLLGSG*PWNSETRLPLN Trigger: ATTAAGAGGGAGGCGGGTTTCTGAGTTCCAGGGCCATCCTGATCCTAAAAGATACAGTTCTGCTAGCTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
||
| 3UTR CCA 72 bp | CTTGTAGGGTGTTGGGATGGTGAGATCTGCTCGGAGTaGCAGCTAGCAGAACTGTATCTTTTAGGATCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LVGCWDGEICSE*QLAELYLLGSG Trigger: TCCTGATCCTAAAAGATACAGTTCTGCTAGCTGCCACTCCGAGCAGATCTCACCATCCCAACACCCTACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
||
| 3UTR GCA 72 bp | GAAAGGTACCTTGTAGGGTGTTGGGATGGTGAGATCTaGTCGGAGTGGCAGCTAGCAGAACTGTATCTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: ERYLVGCWDGEI*SEWQLAELYLL Trigger: TAAAAGATACAGTTCTGCTAGCTGCCACTCCGAGCAGATCTCACCATCCCAACACCCTACAAGGTACCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
||
| 3UTR CCA 72 bp | CTAGCAGAACTGTATCTTTTAGGATCAGGATGGCCCTaGAACTCAGAAACCCGCCTCCCTCTTAATGGGATT | + |
|
Preference number: 3 (lower is better) Translates to: LAELYLLGSGWP*NSETRLPLNGI Trigger: AATCCCATTAAGAGGGAGGCGGGTTTCTGAGTTCCAGGGCCATCCTGATCCTAAAAGATACAGTTCTGCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
||
| 3UTR TCA 72 bp | AGGATTCACATGTTACTTATAGAAGCAATGCAGTGCTaGGCCTGGACAAGAGGAGAGTTGCCTTTCAACCAC | + |
|
Preference number: 3 (lower is better) Translates to: RIHMLLIEAMQC*AWTRGELPFNH Trigger: GTGGTTGAAAGGCAACTCTCCTCTTGTCCAGGCTCAGCACTGCATTGCTTCTATAAGTAACATGTGAATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000129423.8 |
||
| 3UTR GCA 72 bp | TTAGATTTAGTGCTAGGCTTATTCTCTTCCGGTATCTaGTTCTTCCCCCTTGTCAGGATTCACATGTTACTT | + |
|
Preference number: 3 (lower is better) Translates to: LDLVLGLFSSGI*FFPLVRIHMLL Trigger: AAGTAACATGTGAATCCTGACAAGGGGGAAGAAGCAGATACCGGAAGAGAATAAGCCTAGCACTAAATCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| 3UTR CCA 72 bp | AATATCTTCCTTAAACCTTCCCCCTTCATATCACCCTaGTGGCACTACAAGCAAATATTCTACTTTCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: NIFLKPSPFISP*WHYKQIFYFLF Trigger: GAAGAGAAAGTAGAATATTTGCTTGTAGTGCCACCAGGGTGATATGAAGGGGGAAGGTTTAAGGAAGATATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| 3UTR GCA 72 bp | GAAGCTGGTCCCTCAAAGGATTACCAGGATAAGAGATaGAGTTTTTATCCTCTCACATGTAAGCATATTTAT | + |
|
Preference number: 3 (lower is better) Translates to: EAGPSKDYQDKR*SFYPLTCKHIY Trigger: ATAAATATGCTTACATGTGAGAGGATAAAAACTGCATCTCTTATCCTGGTAATCCTTTGAGGGACCAGCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTGTATAGGTCAGCCCCCTTCCCAGCCACCCCTGGTCCCTGTTGTGCCAGCGCGGGGCAGCTGGTaGAGGAGATGCACCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGCIGQPPSQPPLVPVVPARGSW*RRCTQA Trigger: TGCCTGGGTGCATCTCCTCCACCAGCTGCCCCGCGC...TGGCACAACAGGGACCAGGGGTGGCTGGGAAGGGGGCTGACCTATACAGCCTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | GCCACCTGTACGGGGCTCAGGGACACTCCTTGCCAGAAGGCCAGTCCTTGCAGGTCGGCGCGGGGCAGCTaGTGGAGGAGATGCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ATCTGLRDTPCQKASPCRSARGS*WRRCTQ Trigger: CTGGGTGCATCTCCTCCACCAGCTGCCCCGCGCCGA...CCTGCAAGGACTGGCCTTCTGGCAAGGAGTGTCCCTGAGCCCCGTACAGGTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153673.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTGTATAGGTCAGCCCCCTTCCCAGCCACCCCTGGTCCCTGTTGTGCCAGCCTTCGGGCTCCCCTaGTGGCAGCCACCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PGCIGQPPSQPPLVPVVPAFGLP*WQPPAP Trigger: TGGAGCTGGTGGCTGCCACCAGGGGAGCCCGAAGGC...TGGCACAACAGGGACCAGGGGTGGCTGGGAAGGGGGCTGACCTATACAGCCTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR TCA 90 bp | CTCCCCTGGTGGCAGCCACCAGCTCCATGCGGACTGACAGCACTTCCTCCAGGGCAATGCAGCTCCAGGTaGCGCAACCTCCTCCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPWWQPPAPCGLTALPPGQCSSR*RNLLRV Trigger: CACCCGGAGGAGGTTGCGTCACCTGGAGCTGCATTG...CCCTGGAGGAAGTGCTGTCAGTCCGCATGGAGCTGGTGGCTGCCACCAGGGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000153673.8 ENSMUST00000206987.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAGGTGAGGAACACCAGGCTGTATAGGTCAGCCCCCTTCCCAGCCACCCCTGCGCGGGGCAGCTGGTaGAGGAGATGCACCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PEVRNTRLYRSAPFPATPARGSW*RRCTQA Trigger: TGCCTGGGTGCATCTCCTCCACCAGCTGCCCCGCGC...AGGGGTGGCTGGGAAGGGGGCTGACCTATACAGCCTGGTGTTCCTCACCTCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGTACCTGCCTCCAGCTTCATCCCTCCAAGGACAGGACTGGCAGCCAGAGGTCGGCGCGGGGCAGCTaGTGGAGGAGATGCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ACTCLQLHPSKDRTGSQRSARGS*WRRCTQ Trigger: CTGGGTGCATCTCCTCCACCAGCTGCCCCGCGCCGA...CCTCTGGCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGGCAGGTACAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | GACGTGCCTGTACCTGCCTCCAGCTTCATCCCTCCAAGGACAGGACTGGCAGCCTCGGCGCGGGGCAGCTaGTGGAGGAGATGCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DVPVPASSFIPPRTGLAASARGS*WRRCTQ Trigger: CTGGGTGCATCTCCTCCACCAGCTGCCCCGCGCCGA...GGCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGGCAGGTACAGGCACGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | TCACCCAGCCTCTCCACCGTTTCCAGCACCACGTCATCGATGGTGCTGAGCGTGGGGGAGCAAAGCCGCTaGGCACCGGGCGGAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPSLSTVSSTTSSMVLSVGEQSR*APGGAG Trigger: TCCAGCTCCGCCCGGTGCCCAGCGGCTTTGCTCCCC...CACGCTCAGCACCATCGATGACGTGGTGCTGGAAACGGTGGAGAGGCTGGGTGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206987.2 |
||
| CDS-3UTR CCA 90 bp | GGAACACCAGGCTGTATAGGTCAGCCCCCTTCCCAGCCACCCCTGGTCCCTGTTGCCTTCGGGCTCCCCTaGTGGCAGCCACCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTPGCIGQPPSQPPLVPVAFGLP*WQPPAP Trigger: TGGAGCTGGTGGCTGCCACCAGGGGAGCCCGAAGGC...AACAGGGACCAGGGGTGGCTGGGAAGGGGGCTGACCTATACAGCCTGGTGTTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR CCA 90 bp | GGACGTGCCTGTACCTGCCTCCAGCTTCATCCCTCCAAGGACAGGACTGGCAGCGCCTTCGGGCTCCCCTaGTGGCAGCCACCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRACTCLQLHPSKDRTGSAFGLP*WQPPAP Trigger: TGGAGCTGGTGGCTGCCACCAGGGGAGCCCGAAGGC...GCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGGCAGGTACAGGCACGTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR TCA 90 bp | TGCCTGTACCTGCCTCCAGCTTCATCCCTCCAAGGACAGGACTGGCAGCCAGAGGGCGTGCAGCAGTGCTaGGCTGAGCTGGGACACCCC | + |
|
Preference number: 4 (lower is better) Translates to: CLYLPPASSLQGQDWQPEGVQQC*AELGHP Trigger: GGGGTGTCCCAGCTCAGCTCAGCACTGCTGCACGCC...CTCTGGCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGGCAGGTACAGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR CCA 90 bp | ACACGCCGTCACACGCCGTTAATCTCCTCACTAGGGAGGCAGAGGCTGAGGCAGGCGCGGGGCAGCTGGTaGAGGAGATGCACCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TRRHTPLISSLGRQRLRQARGSW*RRCTQA Trigger: TGCCTGGGTGCATCTCCTCCACCAGCTGCCCCGCGC...CTGCCTCAGCCTCTGCCTCCCTAGTGAGGAGATTAACGGCGTGTGACGGCGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | CTTCAGCCACCTGTACGGGGCTCAGGGACACTCCTTGCCAGAAGGCCAGTCCTTGCGCGGGGCAGCTGGTaGAGGAGATGCACCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LQPPVRGSGTLLARRPVLARGSW*RRCTQA Trigger: TGCCTGGGTGCATCTCCTCCACCAGCTGCCCCGCGC...AAGGACTGGCCTTCTGGCAAGGAGTGTCCCTGAGCCCCGTACAGGTGGCTGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153673.8 |
||
| CDS-3UTR CCA 90 bp | TGCGGACTGACAGCACTTCCTCCAGGGTGGTCAGCTCCGTCTTCACTGCCTCACGCGCGGGGCAGCTGGTaGAGGAGATGCACCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CGLTALPPGWSAPSSLPHARGSW*RRCTQA Trigger: TGCCTGGGTGCATCTCCTCCACCAGCTGCCCCGCGC...GTGAGGCAGTGAAGACGGAGCTGACCACCCTGGAGGAAGTGCTGTCAGTCCGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206987.2 |
||
| CDS-3UTR CCA 90 bp | TGCGGACTGACAGCACTTCCTCCAGGGTGGTCAGCTCCGTCTTCACTGCCTCACTCGGCGCGGGGCAGCTaGTGGAGGAGATGCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CGLTALPPGWSAPSSLPHSARGS*WRRCTQ Trigger: CTGGGTGCATCTCCTCCACCAGCTGCCCCGCGCCGA...GTGAGGCAGTGAAGACGGAGCTGACCACCCTGGAGGAAGTGCTGTCAGTCCGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206987.2 |
||
| CDS-3UTR TCA 90 bp | CCACCTGTACGGGGCTCAGGGACACTCCTTGCCAGAAGGCCAGTCCTTGCAGGTCAATGCAGCTCCAGGTaGCGCAACCTCCTCCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PPVRGSGTLLARRPVLAGQCSSR*RNLLRV Trigger: CACCCGGAGGAGGTTGCGTCACCTGGAGCTGCATTG...ACCTGCAAGGACTGGCCTTCTGGCAAGGAGTGTCCCTGAGCCCCGTACAGGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153673.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGCTGTATAGGTCAGCCCCCTTCCCAGCCACCCCTGGTCCCTGTTGTGCCACAGCTCCGTCTTCACTaGCTCACCCAGCCTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PGCIGQPPSQPPLVPVVPQLRLH*LTQPLH Trigger: GTGGAGAGGCTGGGTGAGGCAGTGAAGACGGAGCTG...TGGCACAACAGGGACCAGGGGTGGCTGGGAAGGGGGCTGACCTATACAGCCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTGTATAGGTCAGCCCCCTTCCCAGCCACCCCTGGTCCCTGTTGTGCCAAGTGCTGAGCTGAGCTaGGACACCCCATCGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGCIGQPPSQPPLVPVVPSAELS*DTPSLV Trigger: GACCAGCGATGGGGTGTCCCAGCTCAGCTCAGCACT...TGGCACAACAGGGACCAGGGGTGGCTGGGAAGGGGGCTGACCTATACAGCCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTGTATAGGTCAGCCCCCTTCCCAGCCACCCCTGGTCCCTGTTGTGCCACTGGCTAGAGCACGCTaGGACAGCGTCAGCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PGCIGQPPSQPPLVPVVPLARAR*DSVSLC Trigger: ACAGAGGCTGACGCTGTCCCAGCGTGCTCTAGCCAG...TGGCACAACAGGGACCAGGGGTGGCTGGGAAGGGGGCTGACCTATACAGCCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR TCA 90 bp | CCACCTGTACGGGGCTCAGGGACACTCCTTGCCAGAAGGCCAGTCCTTGCAGGTCGTCATCGATGGTGCTaGGCGTGTGGTTGGCGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPVRGSGTLLARRPVLAGRHRWC*ACGWRA Trigger: TGCACGCCAACCACACGCTCAGCACCATCGATGACG...ACCTGCAAGGACTGGCCTTCTGGCAAGGAGTGTCCCTGAGCCCCGTACAGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032594.13 |
||
| CDS-3UTR TCA 90 bp | GAGGTGAGGAACACCAGGCTGTATAGGTCAGCCCCCTTCCCAGCCACCCCTGGTTGGAGCAGAAGTCACTaGGGCCCACAGCTGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EVRNTRLYRSAPFPATPGWSRSH*GPQLWQ Trigger: CTGCCACAGCTGTGGGCCTCAGTGACTTCTGCTCCA...ACCAGGGGTGGCTGGGAAGGGGGCTGACCTATACAGCCTGGTGTTCCTCACCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR TCA 90 bp | GACGTGCCTGTACCTGCCTCCAGCTTCATCCCTCCAAGGACAGGACTGGCAGCCTGGAGCAGAAGTCACTaGGGCCCACAGCTGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DVPVPASSFIPPRTGLAAWSRSH*GPQLWQ Trigger: CTGCCACAGCTGTGGGCCTCAGTGACTTCTGCTCCA...GGCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGGCAGGTACAGGCACGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR TCA 90 bp | CCAGAGGTGAGGAACACCAGGCTGTATAGGTCAGCCCCCTTCCCAGCCACCCCTTCCAGGCCCTGCAGCTaGGAGTGGATGCTGGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PEVRNTRLYRSAPFPATPSRPCS*EWMLAR Trigger: TCTAGCCAGCATCCACTCTCAGCTGCAGGGCCTGGA...AGGGGTGGCTGGGAAGGGGGCTGACCTATACAGCCTGGTGTTCCTCACCTCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR CCA 90 bp | CCTGCCTCCAGCTTCATCCCTCCAAGGACAGGACTGGCAGCCAGAGGTGAGGAAAGCAGCAGGGCCTGCTaGTACTCTTGGTCGCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PASSFIPPRTGLAARGEESSRAC*YSWSRG Trigger: TCCCCGCGACCAAGAGTACCAGCAGGCCCTGCTGCT...TTCCTCACCTCTGGCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGTACCTGCCTCCAGCTTCATCCCTCCAAGGACAGGACTGGCAGCCAGAGGAGTGCTGAGCTGAGCTaGGACACCCCATCGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ACTCLQLHPSKDRTGSQRSAELS*DTPSLV Trigger: GACCAGCGATGGGGTGTCCCAGCTCAGCTCAGCACT...CCTCTGGCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGGCAGGTACAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR CCA 90 bp | GACGTGCCTGTACCTGCCTCCAGCTTCATCCCTCCAAGGACAGGACTGGCAGCCAGTGCTGAGCTGAGCTaGGACACCCCATCGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: DVPVPASSFIPPRTGLAASAELS*DTPSLV Trigger: GACCAGCGATGGGGTGTCCCAGCTCAGCTCAGCACT...GGCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGGCAGGTACAGGCACGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTGTATAGGTCAGCCCCCTTCCCAGCCACCCCTGGTCCCTGTTGTGCCAATGGTGCTGAGCGTGTaGTTGGCGTGCAGCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGCIGQPPSQPPLVPVVPMVLSV*LACSSA Trigger: AGCACTGCTGCACGCCAACCACACGCTCAGCACCAT...TGGCACAACAGGGACCAGGGGTGGCTGGGAAGGGGGCTGACCTATACAGCCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTCTGGGCAGCATATTTAGAGAACCTGTTCCCTGGGCCTCCAGACCAGCACGGGGAGCAAAGCCGCTaGGCACCGGGCGGAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLWAAYLENLFPGPPDQHGEQSR*APGGAG Trigger: TCCAGCTCCGCCCGGTGCCCAGCGGCTTTGCTCCCC...GTGCTGGTCTGGAGGCCCAGGGAACAGGTTCTCTAAATATGCTGCCCAGAGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | GAGGACATAGGCCAGCCACCTGTACTCCTCCACGAAAGTCACATCTTCAGCCACGGGGAGCAAAGCCGCTaGGCACCGGGCGGAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EDIGQPPVLLHESHIFSHGEQSR*APGGAG Trigger: TCCAGCTCCGCCCGGTGCCCAGCGGCTTTGCTCCCC...GTGGCTGAAGATGTGACTTTCGTGGAGGAGTACAGGTGGCTGGCCTATGTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153673.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGTACCTGCCTCCAGCTTCATCCCTCCAAGGACAGGACTGGCAGCCAGAGGCTGGCTAGAGCACGCTaGGACAGCGTCAGCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ACTCLQLHPSKDRTGSQRLARAR*DSVSLC Trigger: ACAGAGGCTGACGCTGTCCCAGCGTGCTCTAGCCAG...CCTCTGGCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGGCAGGTACAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR CCA 90 bp | AACACCAGGCTGTATAGGTCAGCCCCCTTCCCAGCCACCCCTGGTCCCTGTTGTGTAGTCATCACTGGGTaGGAAGAGGGCCCAGGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: NTRLYRSAPFPATPGPCCVVITG*EEGPGA Trigger: CGCGCCTGGGCCCTCTTCCCACCCAGTGATGACTAC...ACAACAGGGACCAGGGGTGGCTGGGAAGGGGGCTGACCTATACAGCCTGGTGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| 3UTR CAA 72 bp | GGGGCTCAGGGACACTCCTTGCCAGAAGGCCAGTCCTaGCAGGTACTGAGCAGCAGCTTCAGCCTGCCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: GAQGHSLPEGQS*QVLSSSFSLPS Trigger: CGAAGGCAGGCTGAAGCTGCTGCTCAGTACCTGCAAGGACTGGCCTTCTGGCAAGGAGTGTCCCTGAGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032594.13 ENSMUST00000153673.8 |
||
| CDS-3UTR TCA 90 bp | GAGGACATAGGCCAGCCACCTGTACTCCTCCACGAAAGTCACATCTTCAGCCACGGCGTGCAGCAGTGCTaGGCTGAGCTGGGACACCCC | + |
|
Preference number: 4 (lower is better) Translates to: EDIGQPPVLLHESHIFSHGVQQC*AELGHP Trigger: GGGGTGTCCCAGCTCAGCTCAGCACTGCTGCACGCC...GTGGCTGAAGATGTGACTTTCGTGGAGGAGTACAGGTGGCTGGCCTATGTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032594.13 |
||
| CDS-3UTR TCA 90 bp | CCCTGTTGTGCCACCTCAGCAATCCCCTGTGCTAAGGAGAAATGGGGATGGGGGCAATGCAGCTCCAGGTaGCGCAACCTCCTCCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PCCATSAIPCAKEKWGWGQCSSR*RNLLRV Trigger: CACCCGGAGGAGGTTGCGTCACCTGGAGCTGCATTG...CCCCCATCCCCATTTCTCCTTAGCACAGGGGATTGCTGAGGTGGCACAACAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 |
||
| CDS-3UTR GCA 90 bp | AACACCAGGCTGTATAGGTCAGCCCCCTTCCCAGCCACCCCTGGTCCCTGTTGTAGCGTGTGGTTGGCGTaGAGCAGTGCTGAGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NTRLYRSAPFPATPGPCCSVWLA*SSAELS Trigger: GCTCAGCTCAGCACTGCTGCACGCCAACCACACGCT...ACAACAGGGACCAGGGGTGGCTGGGAAGGGGGCTGACCTATACAGCCTGGTGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR GCA 90 bp | GGAACACCAGGCTGTATAGGTCAGCCCCCTTCCCAGCCACCCCTGGTCCCTGTTACCAGCCATTTGCTCTaGTTTGCCAGGCCCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GTPGCIGQPPSQPPLVPVTSHLL*FARPRR Trigger: CCTCCTGGGCCTGGCAAAGCAGAGCAAATGGCTGGT...AACAGGGACCAGGGGTGGCTGGGAAGGGGGCTGACCTATACAGCCTGGTGTTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGTGATTCACAGTCTCTGGGCAGCATATTTAGAGAACCTGTTCCCTGGGCCGGGGAGCAAAGCCGCTaGGCACCGGGCGGAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AGDSQSLGSIFREPVPWAGEQSR*APGGAG Trigger: TCCAGCTCCGCCCGGTGCCCAGCGGCTTTGCTCCCC...GGCCCAGGGAACAGGTTCTCTAAATATGCTGCCCAGAGACTGTGAATCACCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTGTATAGGTCAGCCCCCTTCCCAGCCACCCCTGGTCCCTGTTGTGCCATCTGTTGGAAGGGGTTaGAGACCGCCTGGTTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: PGCIGQPPSQPPLVPVVPSVGRG*RPPGCT Trigger: TGTGCAACCAGGCGGTCTCCAACCCCTTCCAACAGA...TGGCACAACAGGGACCAGGGGTGGCTGGGAAGGGGGCTGACCTATACAGCCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR CCA 90 bp | TGCCTGTACCTGCCTCCAGCTTCATCCCTCCAAGGACAGGACTGGCAGCCAGAGCTGGCTAGAGCACGCTaGGACAGCGTCAGCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CLYLPPASSLQGQDWQPELARAR*DSVSLC Trigger: ACAGAGGCTGACGCTGTCCCAGCGTGCTCTAGCCAG...CTCTGGCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGGCAGGTACAGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR CCA 90 bp | GAGGTGAGGAACACCAGGCTGTATAGGTCAGCCCCCTTCCCAGCCACCCCTGGTCATCGTAGTCATCACTaGGTGGGAAGAGGGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EVRNTRLYRSAPFPATPGHRSHH*VGRGPR Trigger: CCTGGGCCCTCTTCCCACCCAGTGATGACTACGATG...ACCAGGGGTGGCTGGGAAGGGGGCTGACCTATACAGCCTGGTGTTCCTCACCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR TCA 90 bp | GCCATCCTAAGTGAGATGTCCATAGCCAGCAGTGTTAGTGGTCAGAGCCCAGTCGGCGTGCAGCAGTGCTaGGCTGAGCTGGGACACCCC | + |
|
Preference number: 4 (lower is better) Translates to: AILSEMSIASSVSGQSPVGVQQC*AELGHP Trigger: GGGGTGTCCCAGCTCAGCTCAGCACTGCTGCACGCC...GACTGGGCTCTGACCACTAACACTGCTGGCTATGGACATCTCACTTAGGATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR GCA 90 bp | CCCTGTTGTGCCACCTCAGCAATCCCCTGTGCTAAGGAGAAATGGGGATGGGGGAGCGTGTGGTTGGCGTaGAGCAGTGCTGAGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PCCATSAIPCAKEKWGWGSVWLA*SSAELS Trigger: GCTCAGCTCAGCACTGCTGCACGCCAACCACACGCT...CCCCCATCCCCATTTCTCCTTAGCACAGGGGATTGCTGAGGTGGCACAACAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR GCA 90 bp | TCCCTGGGCCTCCAGACCAGCACCAGCCCACACTCCACTCTAAATCCCACAACAGCAGCTGAGAGTGGATaGTGGCTAGAGCACGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLGLQTSTSPHSTLNPTTAAESG*WLEHAG Trigger: CCCAGCGTGCTCTAGCCAGCATCCACTCTCAGCTGC...TGTTGTGGGATTTAGAGTGGAGTGTGGGCTGGTGCTGGTCTGGAGGCCCAGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGCCTGGACAAGAGGAGAGTTGCCTTTCAACCACCAGAGGAGGAGTGTCCCTGCAGACTGCGGCAGTaGAGCAGCGCCACCAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLDKRRVAFQPPEEECPCRLRQ*SSATNW Trigger: CCAGTTGGTGGCGCTGCTGCACTGCCGCAGTCTGCA...GGGACACTCCTCCTCTGGTGGTTGAAAGGCAACTCTCCTCTTGTCCAGGCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | CTGTACTCCTCCACGAAAGTCACATCTTCAGCCACCTGTACGGGGCTCAGGGACAGCAGCAGGGCCTGCTaGTACTCTTGGTCGCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LYSSTKVTSSATCTGLRDSSRAC*YSWSRG Trigger: TCCCCGCGACCAAGAGTACCAGCAGGCCCTGCTGCT...GTCCCTGAGCCCCGTACAGGTGGCTGAAGATGTGACTTTCGTGGAGGAGTACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032594.13 ENSMUST00000153673.8 |
||
| CDS-3UTR CCA 90 bp | CCTGTACCTGCCTCCAGCTTCATCCCTCCAAGGACAGGACTGGCAGCCAGAGGTATGGTGCTGAGCGTGTaGTTGGCGTGCAGCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PVPASSFIPPRTGLAARGMVLSV*LACSSA Trigger: AGCACTGCTGCACGCCAACCACACGCTCAGCACCAT...ACCTCTGGCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGGCAGGTACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR TCA 90 bp | GCCAGCAGTGTTAGTGGTCAGAGCCCAGTCAAGGTCAGGTTAGTGGGGCCTTCTCGTCATCGATGGTGCTaGGCGTGTGGTTGGCGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASSVSGQSPVKVRLVGPSRHRWC*ACGWRA Trigger: TGCACGCCAACCACACGCTCAGCACCATCGATGACG...AGAAGGCCCCACTAACCTGACCTTGACTGGGCTCTGACCACTAACACTGCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032594.13 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR TCA 90 bp | CCCTGTTGTGCCACCTCAGCAATCCCCTGTGCTAAGGAGAAATGGGGATGGGGGAGTCCTTGCAGGTACTaGGCAGCAGCTTCAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PCCATSAIPCAKEKWGWGSPCRY*AAASAC Trigger: GCAGGCTGAAGCTGCTGCTCAGTACCTGCAAGGACT...CCCCCATCCCCATTTCTCCTTAGCACAGGGGATTGCTGAGGTGGCACAACAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGCTTCATCCCTCCAAGGACAGGACTGGCAGCCAGAGGTGAGGAACACCAGCCAGGCCCAGGAGGGTaGAGAGACAAACCAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSFIPPRTGLAARGEEHQPGPGG*RDKPEA Trigger: TGCTTCTGGTTTGTCTCTTCACCCTCCTGGGCCTGG...CTGGTGTTCCTCACCTCTGGCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR TCA 90 bp | TACCTGCCTCCAGCTTCATCCCTCCAAGGACAGGACTGGCAGCCAGAGGTGAGGATAGCTGAGGATGTCTaGGCTGAGCCCTGTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YLPPASSLQGQDWQPEVRIAEDV*AEPCLL Trigger: GAGGAGACAGGGCTCAGCTCAGACATCCTCAGCTAT...CCTCACCTCTGGCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGGCAGGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTGGGCCTCCAGACCAGCACCAGCCCACACTCCACTCTAAATCCCACAACAATGGTGCTGAGCGTGTaGTTGGCGTGCAGCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLGLQTSTSPHSTLNPTTMVLSV*LACSSA Trigger: AGCACTGCTGCACGCCAACCACACGCTCAGCACCAT...TGTTGTGGGATTTAGAGTGGAGTGTGGGCTGGTGCTGGTCTGGAGGCCCAGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGTACCTGCCTCCAGCTTCATCCCTCCAAGGACAGGACTGGCAGCCAGAGGGCACCAGGAGACTCATaGCAGTCATCACAACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: ACTCLQLHPSKDRTGSQRAPGDS*QSSQPP Trigger: TGGTGGTTGTGATGACTGCCATGAGTCTCCTGGTGC...CCTCTGGCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGGCAGGTACAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR CCA 90 bp | GGAACACCAGGCTGTATAGGTCAGCCCCCTTCCCAGCCACCCCTGGTCCCTGTTAGCAGCGCCACCAACTaGTGGAAGCTTCTTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GTPGCIGQPPSQPPLVPVSSATN*WKLLSV Trigger: GACAGAAAGAAGCTTCCACCAGTTGGTGGCGCTGCT...AACAGGGACCAGGGGTGGCTGGGAAGGGGGCTGACCTATACAGCCTGGTGTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR TCA 90 bp | TTGTACATTCCACGGGACTGGAAGCTTGACTGTTCCTGTGGCTGCACGCCTGTTCAATGCAGCTCCAGGTaGCGCAACCTCCTCCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LYIPRDWKLDCSCGCTPVQCSSR*RNLLRV Trigger: CACCCGGAGGAGGTTGCGTCACCTGGAGCTGCATTG...AACAGGCGTGCAGCCACAGGAACAGTCAAGCTTCCAGTCCCGTGGAATGTACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR TCA 90 bp | GAGTCTTGTGCTGGGTGTGAGCTGCTAGGAAGCAAGTTGATTCCACGCCTTTCCCAATGCAGCTCCAGGTaGCGCAACCTCCTCCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ESCAGCELLGSKLIPRLSQCSSR*RNLLRV Trigger: CACCCGGAGGAGGTTGCGTCACCTGGAGCTGCATTG...GGAAAGGCGTGGAATCAACTTGCTTCCTAGCAGCTCACACCCAGCACAAGACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR TCA 90 bp | GCCTGTACCTGCCTCCAGCTTCATCCCTCCAAGGACAGGACTGGCAGCCAGAGGTGGATTCCTGAGGGTTaGAAGGGTCATCGTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: ACTCLQLHPSKDRTGSQRWIPEG*KGHRHL Trigger: CAGATGACGATGACCCTTTCAACCCTCAGGAATCCA...CCTCTGGCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGGCAGGTACAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGCCTCCAGACCAGCACCAGCCCACACTCCACTCTAAATCCCACAACAAATCAGCTCCGTCTTCACTaGCTCACCCAGCCTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LGLQTSTSPHSTLNPTTNQLRLH*LTQPLH Trigger: GTGGAGAGGCTGGGTGAGGCAGTGAAGACGGAGCTG...ATTTGTTGTGGGATTTAGAGTGGAGTGTGGGCTGGTGCTGGTCTGGAGGCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGCAGTGTTAGTGGTCAGAGCCCAGTCAAGGTCAGGTTAGTGGGGCCTTCTCAGCCACCAGCTCCATaGGGACTGACAGCACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ASSVSGQSPVKVRLVGPSQPPAP*GLTALP Trigger: AGGAAGTGCTGTCAGTCCGCATGGAGCTGGTGGCTG...AGAAGGCCCCACTAACCTGACCTTGACTGGGCTCTGACCACTAACACTGCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR GCA 90 bp | GCCATCCTAAGTGAGATGTCCATAGCCAGCAGTGTTAGTGGTCAGAGCCCAGTCTGCAGACTGCGGCAGTaGAGCAGCGCCACCAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: AILSEMSIASSVSGQSPVCRLRQ*SSATNW Trigger: CCAGTTGGTGGCGCTGCTGCACTGCCGCAGTCTGCA...GACTGGGCTCTGACCACTAACACTGCTGGCTATGGACATCTCACTTAGGATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR GCA 90 bp | CACTGCCTCACCCAGCCTCTCCACCGTTTCCAGCACCACGTCATCGATGGTGCTAGAAACCAATGCCAATaGCGGCAGAGAAGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HCLTQPLHRFQHHVIDGARNQCQ*RQRRAA Trigger: TGCTGCCCTTCTCTGCCGGCATTGGCATTGGTTTCT...AGCACCATCGATGACGTGGTGCTGGAAACGGTGGAGAGGCTGGGTGAGGCAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206987.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCAGCTTCATCCCTCCAAGGACAGGACTGGCAGCCAGAGGTGAGGAACACCGCACCAGGAGACTCATaGCAGTCATCACAACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: PPASSLQGQDWQPEVRNTAPGDS*QSSQPP Trigger: TGGTGGTTGTGATGACTGCCATGAGTCTCCTGGTGC...GGTGTTCCTCACCTCTGGCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR CCA 90 bp | GGACGTGCCTGTACCTGCCTCCAGCTTCATCCCTCCAAGGACAGGACTGGCAGCCAGCACATAGGTGTCTaGGTTGGAGCAGAAGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: GRACTCLQLHPSKDRTGSQHIGV*VGAEVT Trigger: AGTGACTTCTGCTCCAACCCAGACACCTATGTGCTG...GCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGGCAGGTACAGGCACGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTCTGGGCAGCATATTTAGAGAACCTGTTCCCTGGGCCTCCAGACCAGCACAGCGTCAGCCTCTGTTaGAAGGGGTTGGAGACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLWAAYLENLFPGPPDQHSVSLC*KGLETA Trigger: GGCGGTCTCCAACCCCTTCCAACAGAGGCTGACGCT...GTGCTGGTCTGGAGGCCCAGGGAACAGGTTCTCTAAATATGCTGCCCAGAGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | GGAACACCAGGCTGTATAGGTCAGCCCCCTTCCCAGCCACCCCTGGTCCCTGTTAGCGCCACCAACTGGTaGAAGCTTCTTTCTGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: GTPGCIGQPPSQPPLVPVSATNW*KLLSVT Trigger: TGTGACAGAAAGAAGCTTCCACCAGTTGGTGGCGCT...AACAGGGACCAGGGGTGGCTGGGAAGGGGGCTGACCTATACAGCCTGGTGTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR CCA 90 bp | GACGTGCCTGTACCTGCCTCCAGCTTCATCCCTCCAAGGACAGGACTGGCAGCCAGCGCCACCAACTGGTaGAAGCTTCTTTCTGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: DVPVPASSFIPPRTGLAASATNW*KLLSVT Trigger: TGTGACAGAAAGAAGCTTCCACCAGTTGGTGGCGCT...GGCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGGCAGGTACAGGCACGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR CCA 90 bp | ACACGCCGTCACACGCCGTTAATCTCCTCACTAGGGAGGCAGAGGCTGAGGCAGAGCAGCGCCACCAACTaGTGGAAGCTTCTTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TRRHTPLISSLGRQRLRQSSATN*WKLLSV Trigger: GACAGAAAGAAGCTTCCACCAGTTGGTGGCGCTGCT...CTGCCTCAGCCTCTGCCTCCCTAGTGAGGAGATTAACGGCGTGTGACGGCGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTGTGGCTGCACGCCTGTTTAGATTTAGTGCTAGGCTTATTCTCTTCCGGTGGCGTGCAGCAGTGCTaGGCTGAGCTGGGACACCCC | + |
|
Preference number: 4 (lower is better) Translates to: FLWLHACLDLVLGLFSSGGVQQC*AELGHP Trigger: GGGGTGTCCCAGCTCAGCTCAGCACTGCTGCACGCC...ACCGGAAGAGAATAAGCCTAGCACTAAATCTAAACAGGCGTGCAGCCACAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR TCA 90 bp | ACTGTGACGCTGGAAAGGTACCTTGTAGGGTGTTGGGATGGTGAGATCTGCTCGCGTCATCGATGGTGCTaGGCGTGTGGTTGGCGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TVTLERYLVGCWDGEICSRHRWC*ACGWRA Trigger: TGCACGCCAACCACACGCTCAGCACCATCGATGACG...CGAGCAGATCTCACCATCCCAACACCCTACAAGGTACCTTTCCAGCGTCACAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
||
| CDS-3UTR TCA 90 bp | GCTTTGTACATTCCACGGGACTGGAAGCTTGACTGTTCCTGTGGCTGCACGCCTCCAGGCCCAGGAGGGTaGAGAGACAAACCAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ALYIPRDWKLDCSCGCTPPGPGG*RDKPEA Trigger: TGCTTCTGGTTTGTCTCTTCACCCTCCTGGGCCTGG...AGGCGTGCAGCCACAGGAACAGTCAAGCTTCCAGTCCCGTGGAATGTACAAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR TCA 90 bp | TTGTACATTCCACGGGACTGGAAGCTTGACTGTTCCTGTGGCTGCACGCCTGTTTCCAGGCCCTGCAGCTaGGAGTGGATGCTGGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LYIPRDWKLDCSCGCTPVSRPCS*EWMLAR Trigger: TCTAGCCAGCATCCACTCTCAGCTGCAGGGCCTGGA...AACAGGCGTGCAGCCACAGGAACAGTCAAGCTTCCAGTCCCGTGGAATGTACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR TCA 90 bp | TTAGTTGGGTGTGGTGATACACGCCGTCACACGCCGTTAATCTCCTCACTAGGGTCCAGGCCCTGCAGCTaGGAGTGGATGCTGGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LVGCGDTRRHTPLISSLGSRPCS*EWMLAR Trigger: TCTAGCCAGCATCCACTCTCAGCTGCAGGGCCTGGA...CCCTAGTGAGGAGATTAACGGCGTGTGACGGCGTGTATCACCACACCCAACTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR GCA 90 bp | TTAGTTGGGTGTGGTGATACACGCCGTCACACGCCGTTAATCTCCTCACTAGGGAGCGTGTGGTTGGCGTaGAGCAGTGCTGAGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LVGCGDTRRHTPLISSLGSVWLA*SSAELS Trigger: GCTCAGCTCAGCACTGCTGCACGCCAACCACACGCT...CCCTAGTGAGGAGATTAACGGCGTGTGACGGCGTGTATCACCACACCCAACTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR GCA 90 bp | AGTGAGATGTCCATAGCCAGCAGTGTTAGTGGTCAGAGCCCAGTCAAGGTCAGGAGCGTGTGGTTGGCGTaGAGCAGTGCTGAGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SEMSIASSVSGQSPVKVRSVWLA*SSAELS Trigger: GCTCAGCTCAGCACTGCTGCACGCCAACCACACGCT...CCTGACCTTGACTGGGCTCTGACCACTAACACTGCTGGCTATGGACATCTCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032594.13 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGTGTTAGTGGTCAGAGCCCAGTCAAGGTCAGGTTAGTGGGGCCTTCTCCACAGCCACCAGCTCCATaGGGACTGACAGCACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSVSGQSPVKVRLVGPSPQPPAP*GLTALP Trigger: AGGAAGTGCTGTCAGTCCGCATGGAGCTGGTGGCTG...TGGAGAAGGCCCCACTAACCTGACCTTGACTGGGCTCTGACCACTAACACTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTTAGTGGTCAGAGCCCAGTCAAGGTCAGGTTAGTGGGGCCTTCTCCAGCACTCAGGGACACTCCTTaGCAGAAGGCCAGTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SVSGQSPVKVRLVGPSPALRDTP*QKASPC Trigger: GCAAGGACTGGCCTTCTGGCAAGGAGTGTCCCTGAG...TGCTGGAGAAGGCCCCACTAACCTGACCTTGACTGGGCTCTGACCACTAACACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGCCTCCAGACCAGCACCAGCCCACACTCCACTCTAAATCCCACAACAAATACCAGCCATTTGCTCTaGTTTGCCAGGCCCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGLQTSTSPHSTLNPTTNTSHLL*FARPRR Trigger: CCTCCTGGGCCTGGCAAAGCAGAGCAAATGGCTGGT...ATTTGTTGTGGGATTTAGAGTGGAGTGTGGGCTGGTGCTGGTCTGGAGGCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR GCA 90 bp | GCCATCCTAAGTGAGATGTCCATAGCCAGCAGTGTTAGTGGTCAGAGCCCAGTCGCAGCTGAGAGTGGATaGTGGCTAGAGCACGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AILSEMSIASSVSGQSPVAAESG*WLEHAG Trigger: CCCAGCGTGCTCTAGCCAGCATCCACTCTCAGCTGC...GACTGGGCTCTGACCACTAACACTGCTGGCTATGGACATCTCACTTAGGATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR GCA 90 bp | GGACGTGCCTGTACCTGCCTCCAGCTTCATCCCTCCAAGGACAGGACTGGCAGCATGGAAGACTGCCACTaGACAAAGCGTTTGGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: GRACTCLQLHPSKDRTGSMEDCH*TKRLDS Trigger: GGAATCCAAACGCTTTGTGCAGTGGCAGTCTTCCAT...GCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGGCAGGTACAGGCACGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR CCA 90 bp | GAGCAGGTTGCCATCCTAAGTGAGATGTCCATAGCCAGCAGTGTTAGTGGTCAGAGCAGCAGGGCCTGCTaGTACTCTTGGTCGCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: EQVAILSEMSIASSVSGQSSRAC*YSWSRG Trigger: TCCCCGCGACCAAGAGTACCAGCAGGCCCTGCTGCT...CTGACCACTAACACTGCTGGCTATGGACATCTCACTTAGGATGGCAACCTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | AGTCTCTGGGCAGCATATTTAGAGAACCTGTTCCCTGGGCCTCCAGACCAGCACATGGTGCTGAGCGTGTaGTTGGCGTGCAGCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLWAAYLENLFPGPPDQHMVLSV*LACSSA Trigger: AGCACTGCTGCACGCCAACCACACGCTCAGCACCAT...GTGCTGGTCTGGAGGCCCAGGGAACAGGTTCTCTAAATATGCTGCCCAGAGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | GAGCAGGTTGCCATCCTAAGTGAGATGTCCATAGCCAGCAGTGTTAGTGGTCAGGTAGTCATCACTGGGTaGGAAGAGGGCCCAGGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: EQVAILSEMSIASSVSGQVVITG*EEGPGA Trigger: CGCGCCTGGGCCCTCTTCCCACCCAGTGATGACTAC...CTGACCACTAACACTGCTGGCTATGGACATCTCACTTAGGATGGCAACCTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGCCTCCAGACCAGCACCAGCCCACACTCCACTCTAAATCCCACAACAAATCATCGTAGTCATCACTaGGTGGGAAGAGGGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGLQTSTSPHSTLNPTTNHRSHH*VGRGPR Trigger: CCTGGGCCCTCTTCCCACCCAGTGATGACTACGATG...ATTTGTTGTGGGATTTAGAGTGGAGTGTGGGCTGGTGCTGGTCTGGAGGCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | AGTCTCTGGGCAGCATATTTAGAGAACCTGTTCCCTGGGCCTCCAGACCAGCACCATCGTAGTCATCACTaGGTGGGAAGAGGGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLWAAYLENLFPGPPDQHHRSHH*VGRGPR Trigger: CCTGGGCCCTCTTCCCACCCAGTGATGACTACGATG...GTGCTGGTCTGGAGGCCCAGGGAACAGGTTCTCTAAATATGCTGCCCAGAGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR TCA 90 bp | GATTCACAGTCTCTGGGCAGCATATTTAGAGAACCTGTTCCCTGGGCCTCCAGATGGAGCAGAAGTCACTaGGGCCCACAGCTGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DSQSLGSIFREPVPWASRWSRSH*GPQLWQ Trigger: CTGCCACAGCTGTGGGCCTCAGTGACTTCTGCTCCA...TCTGGAGGCCCAGGGAACAGGTTCTCTAAATATGCTGCCCAGAGACTGTGAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR TCA 90 bp | AGTCTCTGGGCAGCATATTTAGAGAACCTGTTCCCTGGGCCTCCAGACCAGCACATAGCTGAGGATGTCTaGGCTGAGCCCTGTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLWAAYLENLFPGPPDQHIAEDV*AEPCLL Trigger: GAGGAGACAGGGCTCAGCTCAGACATCCTCAGCTAT...GTGCTGGTCTGGAGGCCCAGGGAACAGGTTCTCTAAATATGCTGCCCAGAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR GCA 90 bp | GAGTCTTGTGCTGGGTGTGAGCTGCTAGGAAGCAAGTTGATTCCACGCCTTTCCCTCAGGGACACTCCTTaGCAGAAGGCCAGTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ESCAGCELLGSKLIPRLSLRDTP*QKASPC Trigger: GCAAGGACTGGCCTTCTGGCAAGGAGTGTCCCTGAG...GGAAAGGCGTGGAATCAACTTGCTTCCTAGCAGCTCACACCCAGCACAAGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR GCA 90 bp | AGCATATTTAGAGAACCTGTTCCCTGGGCCTCCAGACCAGCACCAGCCCACACTCCATTTGCTCTGCTTTaGCAGGCCCAGGAGGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SIFREPVPWASRPAPAHTPFALL*QAQEGE Trigger: TTCACCCTCCTGGGCCTGGCAAAGCAGAGCAAATGG...AGTGTGGGCTGGTGCTGGTCTGGAGGCCCAGGGAACAGGTTCTCTAAATATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | GAGCAGGTTGCCATCCTAAGTGAGATGTCCATAGCCAGCAGTGTTAGTGGTCAGAGCGTCAGCCTCTGTTaGAAGGGGTTGGAGACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: EQVAILSEMSIASSVSGQSVSLC*KGLETA Trigger: GGCGGTCTCCAACCCCTTCCAACAGAGGCTGACGCT...CTGACCACTAACACTGCTGGCTATGGACATCTCACTTAGGATGGCAACCTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| 3UTR CAA 72 bp | AGGAGACTCATGGCAGTCATCACAACCACCAGCCATTaGCTCTGCTTTGCCAGGCCCAGGAGGGTGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RRLMAVITTTSH*LCFARPRRVKR Trigger: TCTCTTCACCCTCCTGGGCCTGGCAAAGCAGAGCAAATGGCTGGTGGTTGTGATGACTGCCATGAGTCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032594.13 |
||
| 3UTR CAA 72 bp | AAGAACCAGGGATACCCCTGGTGCTTCTGTAGTCACTaGAGGACCCTGCTCTGCCATCTCCCCTACAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KNQGYPWCFCSH*RTLLCHLPYRA Trigger: AGCTCTGTAGGGGAGATGGCAGAGCAGGGTCCTCAAGTGACTACAGAAGCACCAGGGGTATCCCTGGTTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
||
| CDS-3UTR TCA 90 bp | AATATCTTCCTTAAACCTTCCCCCTTCATATCACCCTGGTGGCACTACAAGCAAGGCGTGCAGCAGTGCTaGGCTGAGCTGGGACACCCC | + |
|
Preference number: 4 (lower is better) Translates to: NIFLKPSPFISPWWHYKQGVQQC*AELGHP Trigger: GGGGTGTCCCAGCTCAGCTCAGCACTGCTGCACGCC...TTGCTTGTAGTGCCACCAGGGTGATATGAAGGGGGAAGGTTTAAGGAAGATATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR TCA 90 bp | CTGGTGATTCACAGTCTCTGGGCAGCATATTTAGAGAACCTGTTCCCTGGGCCTAGTCCTTGCAGGTACTaGGCAGCAGCTTCAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LVIHSLWAAYLENLFPGPSPCRY*AAASAC Trigger: GCAGGCTGAAGCTGCTGCTCAGTACCTGCAAGGACT...AGGCCCAGGGAACAGGTTCTCTAAATATGCTGCCCAGAGACTGTGAATCACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR GCA 90 bp | CCCTATTCTGATACAAGCGTTGGTTTTCTGGAGTCTTGTGCTGGGTGTGAGCTGCAGCTCCGTCTTCACTaGCTCACCCAGCCTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PYSDTSVGFLESCAGCELQLRLH*LTQPLH Trigger: GTGGAGAGGCTGGGTGAGGCAGTGAAGACGGAGCTG...CAGCTCACACCCAGCACAAGACTCCAGAAAACCAACGCTTGTATCAGAATAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR GCA 90 bp | CTGGTGATTCACAGTCTCTGGGCAGCATATTTAGAGAACCTGTTCCCTGGGCCTCTCAGGGACACTCCTTaGCAGAAGGCCAGTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LVIHSLWAAYLENLFPGPLRDTP*QKASPC Trigger: GCAAGGACTGGCCTTCTGGCAAGGAGTGTCCCTGAG...AGGCCCAGGGAACAGGTTCTCTAAATATGCTGCCCAGAGACTGTGAATCACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR GCA 90 bp | GCCATCCTAAGTGAGATGTCCATAGCCAGCAGTGTTAGTGGTCAGAGCCCAGTCCCATTTGCTCTGCTTTaGCAGGCCCAGGAGGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: AILSEMSIASSVSGQSPVPFALL*QAQEGE Trigger: TTCACCCTCCTGGGCCTGGCAAAGCAGAGCAAATGG...GACTGGGCTCTGACCACTAACACTGCTGGCTATGGACATCTCACTTAGGATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCCTTAAACCTTCCCCCTTCATATCACCCTGGTGGCACTACAAGCAAATATGCCTTCGGGCTCCCCTaGTGGCAGCCACCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSLNLPPSYHPGGTTSKYAFGLP*WQPPAP Trigger: TGGAGCTGGTGGCTGCCACCAGGGGAGCCCGAAGGC...ATATTTGCTTGTAGTGCCACCAGGGTGATATGAAGGGGGAAGGTTTAAGGAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTGTACATTCCACGGGACTGGAAGCTTGACTGTTCCTGTGGCTGCACGCCTGCACCAGGAGACTCATaGCAGTCATCACAACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: ALYIPRDWKLDCSCGCTPAPGDS*QSSQPP Trigger: TGGTGGTTGTGATGACTGCCATGAGTCTCCTGGTGC...AGGCGTGCAGCCACAGGAACAGTCAAGCTTCCAGTCCCGTGGAATGTACAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGCCTCCAGACCAGCACCAGCCCACACTCCACTCTAAATCCCACAACAAATAGCAGCGCCACCAACTaGTGGAAGCTTCTTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LGLQTSTSPHSTLNPTTNSSATN*WKLLSV Trigger: GACAGAAAGAAGCTTCCACCAGTTGGTGGCGCTGCT...ATTTGTTGTGGGATTTAGAGTGGAGTGTGGGCTGGTGCTGGTCTGGAGGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| 3UTR CAA 72 bp | CCTGCTCTGCCATCTCCCCTACAGAGCTGCTGGTCTTaGGGAAGAGTCCCACTGTGGCAGATTAGTTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PALPSPLQSCWS*GRVPLWQISFV Trigger: GACAAAACTAATCTGCCACAGTGGGACTCTTCCCAAAGACCAGCAGCTCTGTAGGGGAGATGGCAGAGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
||
| CDS-3UTR TCA 90 bp | AGTCTCTGGGCAGCATATTTAGAGAACCTGTTCCCTGGGCCTCCAGACCAGCACTGGATTCCTGAGGGTTaGAAGGGTCATCGTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLWAAYLENLFPGPPDQHWIPEG*KGHRHL Trigger: CAGATGACGATGACCCTTTCAACCCTCAGGAATCCA...GTGCTGGTCTGGAGGCCCAGGGAACAGGTTCTCTAAATATGCTGCCCAGAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR GCA 90 bp | GCTTTGTACATTCCACGGGACTGGAAGCTTGACTGTTCCTGTGGCTGCACGCCTTACCATAGAAACCAATaGCAATGCCGGCACAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALYIPRDWKLDCSCGCTPYHRNQ*QCRHSP Trigger: TGGGCTGTGCCGGCATTGGCATTGGTTTCTATGGTA...AGGCGTGCAGCCACAGGAACAGTCAAGCTTCCAGTCCCGTGGAATGTACAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTGTGGCTGCACGCCTGTTTAGATTTAGTGCTAGGCTTATTCTCTTCCGGTCAGCTCCGTCTTCACTaGCTCACCCAGCCTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FLWLHACLDLVLGLFSSGQLRLH*LTQPLH Trigger: GTGGAGAGGCTGGGTGAGGCAGTGAAGACGGAGCTG...ACCGGAAGAGAATAAGCCTAGCACTAAATCTAAACAGGCGTGCAGCCACAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR GCA 90 bp | CCCTATTCTGATACAAGCGTTGGTTTTCTGGAGTCTTGTGCTGGGTGTGAGCTGCAGCCACCAGCTCCATaGGGACTGACAGCACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PYSDTSVGFLESCAGCELQPPAP*GLTALP Trigger: AGGAAGTGCTGTCAGTCCGCATGGAGCTGGTGGCTG...CAGCTCACACCCAGCACAAGACTCCAGAAAACCAACGCTTGTATCAGAATAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR GCA 90 bp | GATTCACAGTCTCTGGGCAGCATATTTAGAGAACCTGTTCCCTGGGCCTCCAGACCATTTGCTCTGCTTTaGCAGGCCCAGGAGGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: DSQSLGSIFREPVPWASRPFALL*QAQEGE Trigger: TTCACCCTCCTGGGCCTGGCAAAGCAGAGCAAATGG...TCTGGAGGCCCAGGGAACAGGTTCTCTAAATATGCTGCCCAGAGACTGTGAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | CTGGTGATTCACAGTCTCTGGGCAGCATATTTAGAGAACCTGTTCCCTGGGCCTTCTGTTGGAAGGGGTTaGAGACCGCCTGGTTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LVIHSLWAAYLENLFPGPSVGRG*RPPGCT Trigger: TGTGCAACCAGGCGGTCTCCAACCCCTTCCAACAGA...AGGCCCAGGGAACAGGTTCTCTAAATATGCTGCCCAGAGACTGTGAATCACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| 3UTR CAA 72 bp | CCCAGCAGGCTTTGTACATTCCACGGGACTGGAAGCTaGACTGTTCCTGTGGCTGCACGCCTGTTTAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: PSRLCTFHGTGS*TVPVAARLFRF Trigger: AAATCTAAACAGGCGTGCAGCCACAGGAACAGTCAAGCTTCCAGTCCCGTGGAATGTACAAAGCCTGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR TCA 90 bp | GCTGCACGCCTGTTTAGATTTAGTGCTAGGCTTATTCTCTTCCGGTATCTGCTTCGTCATCGATGGTGCTaGGCGTGTGGTTGGCGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AARLFRFSARLILFRYLLRHRWC*ACGWRA Trigger: TGCACGCCAACCACACGCTCAGCACCATCGATGACG...AAGCAGATACCGGAAGAGAATAAGCCTAGCACTAAATCTAAACAGGCGTGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTTCCCCCTTGTCAGGATTCACATGTTACTTATAGAAGCAATGCAGTGCTGTGCAGACTGCGGCAGTaGAGCAGCGCCACCAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLPPCQDSHVTYRSNAVLCRLRQ*SSATNW Trigger: CCAGTTGGTGGCGCTGCTGCACTGCCGCAGTCTGCA...CAGCACTGCATTGCTTCTATAAGTAACATGTGAATCCTGACAAGGGGGAAGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGCCTCCAGACCAGCACCAGCCCACACTCCACTCTAAATCCCACAACAAATATGGAAGACTGCCACTaGACAAAGCGTTTGGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGLQTSTSPHSTLNPTTNMEDCH*TKRLDS Trigger: GGAATCCAAACGCTTTGTGCAGTGGCAGTCTTCCAT...ATTTGTTGTGGGATTTAGAGTGGAGTGTGGGCTGGTGCTGGTCTGGAGGCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGTGATTCACAGTCTCTGGGCAGCATATTTAGAGAACCTGTTCCCTGGGCCGCTCAGATGGAAGACTaGCACTGCACAAAGCGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AGDSQSLGSIFREPVPWAAQMED*HCTKRL Trigger: CAAACGCTTTGTGCAGTGGCAGTCTTCCATCTGAGC...GGCCCAGGGAACAGGTTCTCTAAATATGCTGCCCAGAGACTGTGAATCACCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079415.12 |
||
| CDS-3UTR CCA 90 bp | TCTTCCTTAAACCTTCCCCCTTCATATCACCCTGGTGGCACTACAAGCAAATATAGCAGCAGGGCCTGCTaGTACTCTTGGTCGCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSLNLPPSYHPGGTTSKYSSRAC*YSWSRG Trigger: TCCCCGCGACCAAGAGTACCAGCAGGCCCTGCTGCT...ATATTTGCTTGTAGTGCCACCAGGGTGATATGAAGGGGGAAGGTTTAAGGAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCTGCACGCCTGTTTAGATTTAGTGCTAGGCTTATTCTCTTCCGGTATCTGATGGTGCTGAGCGTGTaGTTGGCGTGCAGCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VAARLFRFSARLILFRYLMVLSV*LACSSA Trigger: AGCACTGCTGCACGCCAACCACACGCTCAGCACCAT...CAGATACCGGAAGAGAATAAGCCTAGCACTAAATCTAAACAGGCGTGCAGCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTTATTCTCTTCCGGTATCTGCTTCTTCCCCCTTGTCAGGATTCACATGTTAGCGTCAGCCTCTGTTaGAAGGGGTTGGAGACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLILFRYLLLPPCQDSHVSVSLC*KGLETA Trigger: GGCGGTCTCCAACCCCTTCCAACAGAGGCTGACGCT...AACATGTGAATCCTGACAAGGGGGAAGAAGCAGATACCGGAAGAGAATAAGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGTGATTCACAGTCTCTGGGCAGCATATTTAGAGAACCTGTTCCCTGGGCCACTGCACAAAGCGTTTaGATTCCTGGGTGGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AGDSQSLGSIFREPVPWATAQSV*IPGWEE Trigger: CTCTTCCCACCCAGGAATCCAAACGCTTTGTGCAGT...GGCCCAGGGAACAGGTTCTCTAAATATGCTGCCCAGAGACTGTGAATCACCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079415.12 |
||
| CDS-3UTR TCA 90 bp | TCTTCCTTAAACCTTCCCCCTTCATATCACCCTGGTGGCACTACAAGCAAATATTGGAGCAGAAGTCACTaGGGCCCACAGCTGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSLNLPPSYHPGGTTSKYWSRSH*GPQLWQ Trigger: CTGCCACAGCTGTGGGCCTCAGTGACTTCTGCTCCA...ATATTTGCTTGTAGTGCCACCAGGGTGATATGAAGGGGGAAGGTTTAAGGAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR GCA 90 bp | AACCTTCCCCCTTCATATCACCCTGGTGGCACTACAAGCAAATATTCTACTTTCAGCGTGTGGTTGGCGTaGAGCAGTGCTGAGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NLPPSYHPGGTTSKYSTFSVWLA*SSAELS Trigger: GCTCAGCTCAGCACTGCTGCACGCCAACCACACGCT...GAAAGTAGAATATTTGCTTGTAGTGCCACCAGGGTGATATGAAGGGGGAAGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | TCATCTTTTCCTGCCTGGATTTATAATATCTTCCTTAAACCTTCCCCCTTCATAGGGGAGCAAAGCCGCTaGGCACCGGGCGGAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSFPAWIYNIFLKPSPFIGEQSR*APGGAG Trigger: TCCAGCTCCGCCCGGTGCCCAGCGGCTTTGCTCCCC...TATGAAGGGGGAAGGTTTAAGGAAGATATTATAAATCCAGGCAGGAAAAGATGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | GAGCAGGTTGCCATCCTAAGTGAGATGTCCATAGCCAGCAGTGTTAGTGGTCAGCAGCACATAGGTGTCTaGGTTGGAGCAGAAGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: EQVAILSEMSIASSVSGQQHIGV*VGAEVT Trigger: AGTGACTTCTGCTCCAACCCAGACACCTATGTGCTG...CTGACCACTAACACTGCTGGCTATGGACATCTCACTTAGGATGGCAACCTGCTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCCTTAAACCTTCCCCCTTCATATCACCCTGGTGGCACTACAAGCAAATATCTGGCTAGAGCACGCTaGGACAGCGTCAGCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSLNLPPSYHPGGTTSKYLARAR*DSVSLC Trigger: ACAGAGGCTGACGCTGTCCCAGCGTGCTCTAGCCAG...ATATTTGCTTGTAGTGCCACCAGGGTGATATGAAGGGGGAAGGTTTAAGGAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR TCA 90 bp | CCCACAACAAATAGGTACTCGAAAGGGGAAAGTAGCACATTGTGTTTGCTAATCCGTCATCGATGGTGCTaGGCGTGTGGTTGGCGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PTTNRYSKGESSTLCLLIRHRWC*ACGWRA Trigger: TGCACGCCAACCACACGCTCAGCACCATCGATGACG...GATTAGCAAACACAATGTGCTACTTTCCCCTTTCGAGTACCTATTTGTTGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR TCA 90 bp | TCTTCCTTAAACCTTCCCCCTTCATATCACCCTGGTGGCACTACAAGCAAATATAGTCCTTGCAGGTACTaGGCAGCAGCTTCAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSLNLPPSYHPGGTTSKYSPCRY*AAASAC Trigger: GCAGGCTGAAGCTGCTGCTCAGTACCTGCAAGGACT...ATATTTGCTTGTAGTGCCACCAGGGTGATATGAAGGGGGAAGGTTTAAGGAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTTATTCTCTTCCGGTATCTGCTTCTTCCCCCTTGTCAGGATTCACATGTTATAGCTGAGGATGTCTaGGCTGAGCCCTGTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RLILFRYLLLPPCQDSHVIAEDV*AEPCLL Trigger: GAGGAGACAGGGCTCAGCTCAGACATCCTCAGCTAT...AACATGTGAATCCTGACAAGGGGGAAGAAGCAGATACCGGAAGAGAATAAGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR TCA 90 bp | GTGCCTCATCTTTTCCTGCCTGGATTTATAATATCTTCCTTAAACCTTCCCCCTTCCAGGCCCTGCAGCTaGGAGTGGATGCTGGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VPHLFLPGFIISSLNLPPSRPCS*EWMLAR Trigger: TCTAGCCAGCATCCACTCTCAGCTGCAGGGCCTGGA...AGGGGGAAGGTTTAAGGAAGATATTATAAATCCAGGCAGGAAAAGATGAGGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR GCA 90 bp | GCTGCACGCCTGTTTAGATTTAGTGCTAGGCTTATTCTCTTCCGGTATCTGCTTCCATTTGCTCTGCTTTaGCAGGCCCAGGAGGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: AARLFRFSARLILFRYLLPFALL*QAQEGE Trigger: TTCACCCTCCTGGGCCTGGCAAAGCAGAGCAAATGG...AAGCAGATACCGGAAGAGAATAAGCCTAGCACTAAATCTAAACAGGCGTGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR GCA 90 bp | CACGCCTGTTTAGATTTAGTGCTAGGCTTATTCTCTTCCGGTATCTGCTTCTTCACCAGCCATTTGCTCTaGTTTGCCAGGCCCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HACLDLVLGLFSSGICFFTSHLL*FARPRR Trigger: CCTCCTGGGCCTGGCAAAGCAGAGCAAATGGCTGGT...GAAGAAGCAGATACCGGAAGAGAATAAGCCTAGCACTAAATCTAAACAGGCGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR GCA 90 bp | AACCTTCCCCCTTCATATCACCCTGGTGGCACTACAAGCAAATATTCTACTTTCACCAGCCATTTGCTCTaGTTTGCCAGGCCCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NLPPSYHPGGTTSKYSTFTSHLL*FARPRR Trigger: CCTCCTGGGCCTGGCAAAGCAGAGCAAATGGCTGGT...GAAAGTAGAATATTTGCTTGTAGTGCCACCAGGGTGATATGAAGGGGGAAGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR GCA 90 bp | ATTTATAATATCTTCCTTAAACCTTCCCCCTTCATATCACCCTGGTGGCACTACTGCAGACTGCGGCAGTaGAGCAGCGCCACCAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: IYNIFLKPSPFISPWWHYCRLRQ*SSATNW Trigger: CCAGTTGGTGGCGCTGCTGCACTGCCGCAGTCTGCA...GTAGTGCCACCAGGGTGATATGAAGGGGGAAGGTTTAAGGAAGATATTATAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | TATCTGCTTCTTCCCCCTTGTCAGGATTCACATGTTACTTATAGAAGCAATGCAAGCAGCAGGGCCTGCTaGTACTCTTGGTCGCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YLLLPPCQDSHVTYRSNASSRAC*YSWSRG Trigger: TCCCCGCGACCAAGAGTACCAGCAGGCCCTGCTGCT...TGCATTGCTTCTATAAGTAACATGTGAATCCTGACAAGGGGGAAGAAGCAGATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | CATCTTTTCCTGCCTGGATTTATAATATCTTCCTTAAACCTTCCCCCTTCATATTCGGCGCGGGGCAGCTaGTGGAGGAGATGCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HLFLPGFIISSLNLPPSYSARGS*WRRCTQ Trigger: CTGGGTGCATCTCCTCCACCAGCTGCCCCGCGCCGA...ATATGAAGGGGGAAGGTTTAAGGAAGATATTATAAATCCAGGCAGGAAAAGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCTGCACGCCTGTTTAGATTTAGTGCTAGGCTTATTCTCTTCCGGTATCTGAGCAGCGCCACCAACTaGTGGAAGCTTCTTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VAARLFRFSARLILFRYLSSATN*WKLLSV Trigger: GACAGAAAGAAGCTTCCACCAGTTGGTGGCGCTGCT...CAGATACCGGAAGAGAATAAGCCTAGCACTAAATCTAAACAGGCGTGCAGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | ATTTATAATATCTTCCTTAAACCTTCCCCCTTCATATCACCCTGGTGGCACTACGTAGTCATCACTGGGTaGGAAGAGGGCCCAGGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: IYNIFLKPSPFISPWWHYVVITG*EEGPGA Trigger: CGCGCCTGGGCCCTCTTCCCACCCAGTGATGACTAC...GTAGTGCCACCAGGGTGATATGAAGGGGGAAGGTTTAAGGAAGATATTATAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR GCA 90 bp | AACACTTTAGTTGGGTGTGGTGATACACGCCGTCACACGCCGTTAATCTCCTCAATGGAAGACTGCCACTaGACAAAGCGTTTGGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: NTLVGCGDTRRHTPLISSMEDCH*TKRLDS Trigger: GGAATCCAAACGCTTTGTGCAGTGGCAGTCTTCCAT...TGAGGAGATTAACGGCGTGTGACGGCGTGTATCACCACACCCAACTAAAGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | ATTTATAATATCTTCCTTAAACCTTCCCCCTTCATATCACCCTGGTGGCACTACAGTGCTGAGCTGAGCTaGGACACCCCATCGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IYNIFLKPSPFISPWWHYSAELS*DTPSLV Trigger: GACCAGCGATGGGGTGTCCCAGCTCAGCTCAGCACT...GTAGTGCCACCAGGGTGATATGAAGGGGGAAGGTTTAAGGAAGATATTATAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | TATCTGCTTCTTCCCCCTTGTCAGGATTCACATGTTACTTATAGAAGCAATGCAAGTGCTGAGCTGAGCTaGGACACCCCATCGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: YLLLPPCQDSHVTYRSNASAELS*DTPSLV Trigger: GACCAGCGATGGGGTGTCCCAGCTCAGCTCAGCACT...TGCATTGCTTCTATAAGTAACATGTGAATCCTGACAAGGGGGAAGAAGCAGATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | AATATCTTCCTTAAACCTTCCCCCTTCATATCACCCTGGTGGCACTACAAGCAATCTGTTGGAAGGGGTTaGAGACCGCCTGGTTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: NIFLKPSPFISPWWHYKQSVGRG*RPPGCT Trigger: TGTGCAACCAGGCGGTCTCCAACCCCTTCCAACAGA...TTGCTTGTAGTGCCACCAGGGTGATATGAAGGGGGAAGGTTTAAGGAAGATATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR TCA 90 bp | TCCTGTCAAGAGCTGTTTATTGGGTTTATGATGCCCATTTGCTTTACCACACAACCAGGCCCAGGAGGGTaGAGAGACAAACCAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SCQELFIGFMMPICFTTQPGPGG*RDKPEA Trigger: TGCTTCTGGTTTGTCTCTTCACCCTCCTGGGCCTGG...TTGTGTGGTAAAGCAAATGGGCATCATAAACCCAATAAACAGCTCTTGACAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTGTGGCTGCACGCCTGTTTAGATTTAGTGCTAGGCTTATTCTCTTCCGGTATGGAAGACTGCCACTaGACAAAGCGTTTGGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLWLHACLDLVLGLFSSGMEDCH*TKRLDS Trigger: GGAATCCAAACGCTTTGTGCAGTGGCAGTCTTCCAT...ACCGGAAGAGAATAAGCCTAGCACTAAATCTAAACAGGCGTGCAGCCACAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCCTTAAACCTTCCCCCTTCATATCACCCTGGTGGCACTACAAGCAAATATGCACCAGGAGACTCATaGCAGTCATCACAACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SSLNLPPSYHPGGTTSKYAPGDS*QSSQPP Trigger: TGGTGGTTGTGATGACTGCCATGAGTCTCCTGGTGC...ATATTTGCTTGTAGTGCCACCAGGGTGATATGAAGGGGGAAGGTTTAAGGAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTTATTCTCTTCCGGTATCTGCTTCTTCCCCCTTGTCAGGATTCACATGTTCAGCACATAGGTGTCTaGGTTGGAGCAGAAGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: RLILFRYLLLPPCQDSHVQHIGV*VGAEVT Trigger: AGTGACTTCTGCTCCAACCCAGACACCTATGTGCTG...AACATGTGAATCCTGACAAGGGGGAAGAAGCAGATACCGGAAGAGAATAAGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | ATTTATAATATCTTCCTTAAACCTTCCCCCTTCATATCACCCTGGTGGCACTACAAGCGTTTGGATTCCTaGGTGGGAAGAGGGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IYNIFLKPSPFISPWWHYKRLDS*VGRGPR Trigger: CCTGGGCCCTCTTCCCACCCAGGAATCCAAACGCTT...GTAGTGCCACCAGGGTGATATGAAGGGGGAAGGTTTAAGGAAGATATTATAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079415.12 |
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| CDS-3UTR TCA 90 bp | TATCTGCTTCTTCCCCCTTGTCAGGATTCACATGTTACTTATAGAAGCAATGCAATAGCTGAGGATGTCTaGGCTGAGCCCTGTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YLLLPPCQDSHVTYRSNAIAEDV*AEPCLL Trigger: GAGGAGACAGGGCTCAGCTCAGACATCCTCAGCTAT...TGCATTGCTTCTATAAGTAACATGTGAATCCTGACAAGGGGGAAGAAGCAGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR GCA 90 bp | AATATCTTCCTTAAACCTTCCCCCTTCATATCACCCTGGTGGCACTACAAGCAATACCATAGAAACCAATaGCAATGCCGGCACAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NIFLKPSPFISPWWHYKQYHRNQ*QCRHSP Trigger: TGGGCTGTGCCGGCATTGGCATTGGTTTCTATGGTA...TTGCTTGTAGTGCCACCAGGGTGATATGAAGGGGGAAGGTTTAAGGAAGATATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR GCA 90 bp | TCATCTTTTCCTGCCTGGATTTATAATATCTTCCTTAAACCTTCCCCCTTCATAGCAGCTGAGAGTGGATaGTGGCTAGAGCACGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSFPAWIYNIFLKPSPFIAAESG*WLEHAG Trigger: CCCAGCGTGCTCTAGCCAGCATCCACTCTCAGCTGC...TATGAAGGGGGAAGGTTTAAGGAAGATATTATAAATCCAGGCAGGAAAAGATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR CCA 90 bp | AAATATTCTACTTTCTCTTCGAAGACTTCTGTCCCTATTCTGATACAAGCGTTGAGCGTCAGCCTCTGTTaGAAGGGGTTGGAGACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: KYSTFSSKTSVPILIQALSVSLC*KGLETA Trigger: GGCGGTCTCCAACCCCTTCCAACAGAGGCTGACGCT...CAACGCTTGTATCAGAATAGGGACAGAAGTCTTCGAAGAGAAAGTAGAATATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
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| CDS-3UTR GCA 90 bp | TACCCATCCTGTCAAGAGCTGTTTATTGGGTTTATGATGCCCATTTGCTTTACCTACCATAGAAACCAATaGCAATGCCGGCACAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YPSCQELFIGFMMPICFTYHRNQ*QCRHSP Trigger: TGGGCTGTGCCGGCATTGGCATTGGTTTCTATGGTA...GGTAAAGCAAATGGGCATCATAAACCCAATAAACAGCTCTTGACAGGATGGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
||
| CDS-3UTR GCA 90 bp | TCATCTTTTCCTGCCTGGATTTATAATATCTTCCTTAAACCTTCCCCCTTCATACTCAGGGACACTCCTTaGCAGAAGGCCAGTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSFPAWIYNIFLKPSPFILRDTP*QKASPC Trigger: GCAAGGACTGGCCTTCTGGCAAGGAGTGTCCCTGAG...TATGAAGGGGGAAGGTTTAAGGAAGATATTATAAATCCAGGCAGGAAAAGATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
||
| CDS-3UTR GCA 90 bp | AATAGGTACTCGAAAGGGGAAAGTAGCACATTGTGTTTGCTAATCATTAGAATTGCAGCTGAGAGTGGATaGTGGCTAGAGCACGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NRYSKGESSTLCLLIIRIAAESG*WLEHAG Trigger: CCCAGCGTGCTCTAGCCAGCATCCACTCTCAGCTGC...AATTCTAATGATTAGCAAACACAATGTGCTACTTTCCCCTTTCGAGTACCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
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| CDS-3UTR GCA 90 bp | AATAGGTACTCGAAAGGGGAAAGTAGCACATTGTGTTTGCTAATCATTAGAATTCAGCCACCAGCTCCATaGGGACTGACAGCACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NRYSKGESSTLCLLIIRIQPPAP*GLTALP Trigger: AGGAAGTGCTGTCAGTCCGCATGGAGCTGGTGGCTG...AATTCTAATGATTAGCAAACACAATGTGCTACTTTCCCCTTTCGAGTACCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
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| CDS-3UTR CCA 90 bp | TATCTGCTTCTTCCCCCTTGTCAGGATTCACATGTTACTTATAGAAGCAATGCAAGCGCCACCAACTGGTaGAAGCTTCTTTCTGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: YLLLPPCQDSHVTYRSNASATNW*KLLSVT Trigger: TGTGACAGAAAGAAGCTTCCACCAGTTGGTGGCGCT...TGCATTGCTTCTATAAGTAACATGTGAATCCTGACAAGGGGGAAGAAGCAGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
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| CDS-3UTR CCA 90 bp | AATAGGTACTCGAAAGGGGAAAGTAGCACATTGTGTTTGCTAATCATTAGAATTTCTGTTGGAAGGGGTTaGAGACCGCCTGGTTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: NRYSKGESSTLCLLIIRISVGRG*RPPGCT Trigger: TGTGCAACCAGGCGGTCTCCAACCCCTTCCAACAGA...AATTCTAATGATTAGCAAACACAATGTGCTACTTTCCCCTTTCGAGTACCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
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| CDS-3UTR CCA 90 bp | AAATATTCTACTTTCTCTTCGAAGACTTCTGTCCCTATTCTGATACAAGCGTTGCAGCACATAGGTGTCTaGGTTGGAGCAGAAGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: KYSTFSSKTSVPILIQALQHIGV*VGAEVT Trigger: AGTGACTTCTGCTCCAACCCAGACACCTATGTGCTG...CAACGCTTGTATCAGAATAGGGACAGAAGTCTTCGAAGAGAAAGTAGAATATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
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| CDS-3UTR CCA 90 bp | AAATATTCTACTTTCTCTTCGAAGACTTCTGTCCCTATTCTGATACAAGCGTTGAGCGCCACCAACTGGTaGAAGCTTCTTTCTGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: KYSTFSSKTSVPILIQALSATNW*KLLSVT Trigger: TGTGACAGAAAGAAGCTTCCACCAGTTGGTGGCGCT...CAACGCTTGTATCAGAATAGGGACAGAAGTCTTCGAAGAGAAAGTAGAATATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
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| CDS-3UTR TCA 90 bp | AATAGGTACTCGAAAGGGGAAAGTAGCACATTGTGTTTGCTAATCATTAGAATTTGGATTCCTGAGGGTTaGAAGGGTCATCGTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: NRYSKGESSTLCLLIIRIWIPEG*KGHRHL Trigger: CAGATGACGATGACCCTTTCAACCCTCAGGAATCCA...AATTCTAATGATTAGCAAACACAATGTGCTACTTTCCCCTTTCGAGTACCTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119661.8 ENSMUST00000129423.8 |
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| 3UTR CAA 72 bp | TACAGGAATTGGGCACACTATGCCCAGTTTCCCCTATaGCTAGATTCCACACCTCAAATTCATTTGTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: YRNWAHYAQFPL*LDSTPQIHLLK Trigger: TTTTAACAAATGAATTTGAGGTGTGGAATCTAGCAATAGGGGAAACTGGGCATAGTGTGCCCAATTCCTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
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| 3UTR CAA 72 bp | GATAAGACTACCTTCTTATCAATTATTGTTCATCAATaGACCAGTTTCCAGTCTCACATTGTACAAGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: DKTTFLSIIVHQ*TSFQSHIVQAT Trigger: AGTTGCTTGTACAATGTGAGACTGGAAACTGGTCAATTGATGAACAATAATTGATAAGAAGGTAGTCTTATC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
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| CDS CCA 90 bp | TACTCTTGGTCGCGGGGAGCAAAGCCGCTGGGCACCGGGCGGAGCTaGAAGTCGGCGCGGGGCAGCTGGTGGAGGAGATGCACCCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: YSWSRGAKPLGTGRS*KSARGSWWRRCTQA Trigger: TGCCTGGGTGCATCTCCTCCACCAGCTGCCCCGCGCCGACTTCCAGCTCCGCCCGGTGCCCAGCGGCTTTGCTCCCCGCGACCAAGAGTA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 ENSMUST00000153673.8 ENSMUST00000206987.2 |
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| CDS CCA 90 bp | AGCCCAGCCAAGGCTGCCACCAGCAGCAGGGCCTGCTGGTACTCTTaGTCGCGGGGAGCAAAGCCGCTGGGCACCGGGCGGAGCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SPAKAATSSRACWYS*SRGAKPLGTGRSWK Trigger: CTTCCAGCTCCGCCCGGTGCCCAGCGGCTTTGCTCCCCGCGACCAAGAGTACCAGCAGGCCCTGCTGCTGGTGGCAGCCTTGGCTGGGCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 ENSMUST00000153673.8 ENSMUST00000206987.2 |
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| CDS TCA 90 bp | CTGCCTTCGGGCTCCCCTGGTGGCAGCCACCAGCTCCATGCGGACTaGCAGCACTTCCTCCAGGGTGGTCAGCTCCGTCTTCACTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LPSGSPGGSHQLHAD*QHFLQGGQLRLHCL Trigger: GAGGCAGTGAAGACGGAGCTGACCACCCTGGAGGAAGTGCTGTCAGTCCGCATGGAGCTGGTGGCTGCCACCAGGGGAGCCCGAAGGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 ENSMUST00000206869.2 |
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| CDS GCA 90 bp | CTTCAGCCTGCCTTCGGGCTCCCCTGGTGGCAGCCACCAGCTCCATaGGGACTGACAGCACTTCCTCCAGGGTGGTCAGCTCCGTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LQPAFGLPWWQPPAP*GLTALPPGWSAPSS Trigger: TGAAGACGGAGCTGACCACCCTGGAGGAAGTGCTGTCAGTCCGCATGGAGCTGGTGGCTGCCACCAGGGGAGCCCGAAGGCAGGCTGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 ENSMUST00000206869.2 |
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| CDS-3UTR CAA 90 bp | CCAGGCTGTATAGGTCAGCCCCCTTCCCAGCCACCCCTGGTCCCTGTTGTGCCACAGCGTCAGCCTCTGTaGGAAGGGGTTGGAGACCGC | + |
|
Preference number: 5 (lower is better) Translates to: PGCIGQPPSQPPLVPVVPQRQPL*EGVGDR Trigger: GCGGTCTCCAACCCCTTCCAACAGAGGCTGACGCTG...TGGCACAACAGGGACCAGGGGTGGCTGGGAAGGGGGCTGACCTATACAGCCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
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| CDS GCA 90 bp | GGCAGGCTCCAGACTGGAGGGGAGGCTCAGATGGAAGACTGCCACTaGACAAAGCGTTTGGATTCCTGGGTGGGAAGAGGGCCCAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GRLQTGGEAQMEDCH*TKRLDSWVGRGPRR Trigger: GCGCCTGGGCCCTCTTCCCACCCAGGAATCCAAACGCTTTGTGCAGTGGCAGTCTTCCATCTGAGCCTCCCCTCCAGTCTGGAGCCTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079415.12 |
||
| CDS-3UTR CAA 90 bp | GCCTGTACCTGCCTCCAGCTTCATCCCTCCAAGGACAGGACTGGCAGCCAGAGGCAGCGTCAGCCTCTGTaGGAAGGGGTTGGAGACCGC | + |
|
Preference number: 5 (lower is better) Translates to: ACTCLQLHPSKDRTGSQRQRQPL*EGVGDR Trigger: GCGGTCTCCAACCCCTTCCAACAGAGGCTGACGCTG...CCTCTGGCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGGCAGGTACAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR CAA 90 bp | AACACCAGGCTGTATAGGTCAGCCCCCTTCCCAGCCACCCCTGGTCCCTGTTGTGTGCTGAGCGTGTGGTaGGCGTGCAGCAGTGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: NTRLYRSAPFPATPGPCCVLSVW*ACSSAE Trigger: CTCAGCACTGCTGCACGCCAACCACACGCTCAGCAC...ACAACAGGGACCAGGGGTGGCTGGGAAGGGGGCTGACCTATACAGCCTGGTGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR CAA 90 bp | TGCCTGTACCTGCCTCCAGCTTCATCCCTCCAAGGACAGGACTGGCAGCCAGAGCAGCGTCAGCCTCTGTaGGAAGGGGTTGGAGACCGC | + |
|
Preference number: 5 (lower is better) Translates to: CLYLPPASSLQGQDWQPEQRQPL*EGVGDR Trigger: GCGGTCTCCAACCCCTTCCAACAGAGGCTGACGCTG...CTCTGGCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGGCAGGTACAGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR CAA 90 bp | CAAGGACAGGACTGGCAGCCAGAGGTGAGGAACACCAGGCTGTATAGGTCAGCCGTGCTGAGCGTGTGGTaGGCGTGCAGCAGTGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QGQDWQPEVRNTRLYRSAVLSVW*ACSSAE Trigger: CTCAGCACTGCTGCACGCCAACCACACGCTCAGCAC...GGCTGACCTATACAGCCTGGTGTTCCTCACCTCTGGCTGCCAGTCCTGTCCTTG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR CAA 90 bp | CCCTGTTGTGCCACCTCAGCAATCCCCTGTGCTAAGGAGAAATGGGGATGGGGGGTGCTGAGCGTGTGGTaGGCGTGCAGCAGTGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PCCATSAIPCAKEKWGWGVLSVW*ACSSAE Trigger: CTCAGCACTGCTGCACGCCAACCACACGCTCAGCAC...CCCCCATCCCCATTTCTCCTTAGCACAGGGGATTGCTGAGGTGGCACAACAGGG 61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTACCTGCCTCCAGCTTCATCCCTCCAAGGACAGGACTGGCAGCCAGAGGTGCTCAGGGACACTCCTaGCCAGAAGGCCAGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PVPASSFIPPRTGLAARGAQGHS*PEGQSL Trigger: CAAGGACTGGCCTTCTGGCAAGGAGTGTCCCTGAGC...ACCTCTGGCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGGCAGGTACAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
||
| CDS-3UTR CAA 90 bp | ACACGCCGTCACACGCCGTTAATCTCCTCACTAGGGAGGCAGAGGCTGAGGCAGCTCTGTTGGAAGGGGTaGGAGACCGCCTGGTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TRRHTPLISSLGRQRLRQLCWKG*ETAWLH Trigger: GTGCAACCAGGCGGTCTCCAACCCCTTCCAACAGAG...CTGCCTCAGCCTCTGCCTCCCTAGTGAGGAGATTAACGGCGTGTGACGGCGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
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| CDS-3UTR CAA 90 bp | CCTGCCTCCAGCTTCATCCCTCCAAGGACAGGACTGGCAGCCAGAGGTGAGGAACTCTGTTGGAAGGGGTaGGAGACCGCCTGGTTGCAC | + |
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Preference number: 5 (lower is better) Translates to: PASSFIPPRTGLAARGEELCWKG*ETAWLH Trigger: GTGCAACCAGGCGGTCTCCAACCCCTTCCAACAGAG...TTCCTCACCTCTGGCTGCCAGTCCTGTCCTTGGAGGGATGAAGCTGGAGGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
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| CDS-3UTR CAA 90 bp | GCTCTGCCATCTCCCCTACAGAGCTGCTGGTCTTTGGGAAGAGTCCCACTGTGGCCAGAAGGCCAGTCCTaGCAGGTACTGAGCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: ALPSPLQSCWSLGRVPLWPEGQS*QVLSSS Trigger: GCTGCTGCTCAGTACCTGCAAGGACTGGCCTTCTGG...CCACAGTGGGACTCTTCCCAAAGACCAGCAGCTCTGTAGGGGAGATGGCAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
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| CDS-3UTR CAA 90 bp | TTAGTTGGGTGTGGTGATACACGCCGTCACACGCCGTTAATCTCCTCACTAGGGGTGCTGAGCGTGTGGTaGGCGTGCAGCAGTGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LVGCGDTRRHTPLISSLGVLSVW*ACSSAE Trigger: CTCAGCACTGCTGCACGCCAACCACACGCTCAGCAC...CCCTAGTGAGGAGATTAACGGCGTGTGACGGCGTGTATCACCACACCCAACTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
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| CDS-3UTR CAA 90 bp | GCTTTGTACATTCCACGGGACTGGAAGCTTGACTGTTCCTGTGGCTGCACGCCTGCTCAGGGACACTCCTaGCCAGAAGGCCAGTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: ALYIPRDWKLDCSCGCTPAQGHS*PEGQSL Trigger: CAAGGACTGGCCTTCTGGCAAGGAGTGTCCCTGAGC...AGGCGTGCAGCCACAGGAACAGTCAAGCTTCCAGTCCCGTGGAATGTACAAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
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| CDS-3UTR CAA 90 bp | ACACGCCGTCACACGCCGTTAATCTCCTCACTAGGGAGGCAGAGGCTGAGGCAGCACTGCACAAAGCGTTaGGATTCCTGGGTGGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: TRRHTPLISSLGRQRLRQHCTKR*DSWVGR Trigger: TCTTCCCACCCAGGAATCCAAACGCTTTGTGCAGTG...CTGCCTCAGCCTCTGCCTCCCTAGTGAGGAGATTAACGGCGTGTGACGGCGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079415.12 |
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| CDS-3UTR CAA 90 bp | AGTGAGATGTCCATAGCCAGCAGTGTTAGTGGTCAGAGCCCAGTCAAGGTCAGGCCAGAAGGCCAGTCCTaGCAGGTACTGAGCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: SEMSIASSVSGQSPVKVRPEGQS*QVLSSS Trigger: GCTGCTGCTCAGTACCTGCAAGGACTGGCCTTCTGG...CCTGACCTTGACTGGGCTCTGACCACTAACACTGCTGGCTATGGACATCTCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129423.8 ENSMUST00000206869.2 |
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| CDS-3UTR CAA 90 bp | AAGAACCAGGGATACCCCTGGTGCTTCTGTAGTCACTTGAGGACCCTGCTCTGCACAACCACCAGCCATTaGCTCTGCTTTGCCAGGCCC | + |
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Preference number: 5 (lower is better) Translates to: KNQGYPWCFCSHLRTLLCTTTSH*LCFARP Trigger: GGGCCTGGCAAAGCAGAGCAAATGGCTGGTGGTTGT...GCAGAGCAGGGTCCTCAAGTGACTACAGAAGCACCAGGGGTATCCCTGGTTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129423.8 |
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| CDS-3UTR CAA 90 bp | GAGTCTTGTGCTGGGTGTGAGCTGCTAGGAAGCAAGTTGATTCCACGCCTTTCCACAACCACCAGCCATTaGCTCTGCTTTGCCAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ESCAGCELLGSKLIPRLSTTTSH*LCFARP Trigger: GGGCCTGGCAAAGCAGAGCAAATGGCTGGTGGTTGT...GGAAAGGCGTGGAATCAACTTGCTTCCTAGCAGCTCACACCCAGCACAAGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
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| CDS-3UTR CAA 90 bp | TTGTACATTCCACGGGACTGGAAGCTTGACTGTTCCTGTGGCTGCACGCCTGTTACAACCACCAGCCATTaGCTCTGCTTTGCCAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LYIPRDWKLDCSCGCTPVTTTSH*LCFARP Trigger: GGGCCTGGCAAAGCAGAGCAAATGGCTGGTGGTTGT...AACAGGCGTGCAGCCACAGGAACAGTCAAGCTTCCAGTCCCGTGGAATGTACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
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| CDS-3UTR CAA 90 bp | GAGCAGGTTGCCATCCTAAGTGAGATGTCCATAGCCAGCAGTGTTAGTGGTCAGCTCTGTTGGAAGGGGTaGGAGACCGCCTGGTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: EQVAILSEMSIASSVSGQLCWKG*ETAWLH Trigger: GTGCAACCAGGCGGTCTCCAACCCCTTCCAACAGAG...CTGACCACTAACACTGCTGGCTATGGACATCTCACTTAGGATGGCAACCTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
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| CDS-3UTR CAA 90 bp | GAGCAGGTTGCCATCCTAAGTGAGATGTCCATAGCCAGCAGTGTTAGTGGTCAGACAACCACCAGCCATTaGCTCTGCTTTGCCAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: EQVAILSEMSIASSVSGQTTTSH*LCFARP Trigger: GGGCCTGGCAAAGCAGAGCAAATGGCTGGTGGTTGT...CTGACCACTAACACTGCTGGCTATGGACATCTCACTTAGGATGGCAACCTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000129423.8 ENSMUST00000206869.2 |
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| CDS-3UTR CAA 90 bp | AATATCTTCCTTAAACCTTCCCCCTTCATATCACCCTGGTGGCACTACAAGCAAGTGCTGAGCGTGTGGTaGGCGTGCAGCAGTGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: NIFLKPSPFISPWWHYKQVLSVW*ACSSAE Trigger: CTCAGCACTGCTGCACGCCAACCACACGCTCAGCAC...TTGCTTGTAGTGCCACCAGGGTGATATGAAGGGGGAAGGTTTAAGGAAGATATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032594.13 ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
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| CDS-3UTR CAA 90 bp | CACGCCTGTTTAGATTTAGTGCTAGGCTTATTCTCTTCCGGTATCTGCTTCTTCCCAGAAGGCCAGTCCTaGCAGGTACTGAGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HACLDLVLGLFSSGICFFPEGQS*QVLSSS Trigger: GCTGCTGCTCAGTACCTGCAAGGACTGGCCTTCTGG...GAAGAAGCAGATACCGGAAGAGAATAAGCCTAGCACTAAATCTAAACAGGCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
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| CDS-3UTR CAA 90 bp | TTCTCTTCCGGTATCTGCTTCTTCCCCCTTGTCAGGATTCACATGTTACTTATACAGCGTCAGCCTCTGTaGGAAGGGGTTGGAGACCGC | + |
|
Preference number: 5 (lower is better) Translates to: FSSGICFFPLVRIHMLLIQRQPL*EGVGDR Trigger: GCGGTCTCCAACCCCTTCCAACAGAGGCTGACGCTG...TATAAGTAACATGTGAATCCTGACAAGGGGGAAGAAGCAGATACCGGAAGAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
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| CDS-3UTR CAA 90 bp | CCCACAACAAATAGGTACTCGAAAGGGGAAAGTAGCACATTGTGTTTGCTAATCGCTCAGGGACACTCCTaGCCAGAAGGCCAGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PTTNRYSKGESSTLCLLIAQGHS*PEGQSL Trigger: CAAGGACTGGCCTTCTGGCAAGGAGTGTCCCTGAGC...GATTAGCAAACACAATGTGCTACTTTCCCCTTTCGAGTACCTATTTGTTGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
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| CDS-3UTR CAA 90 bp | TATCTGCTTCTTCCCCCTTGTCAGGATTCACATGTTACTTATAGAAGCAATGCACTCTGTTGGAAGGGGTaGGAGACCGCCTGGTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: YLLLPPCQDSHVTYRSNALCWKG*ETAWLH Trigger: GTGCAACCAGGCGGTCTCCAACCCCTTCCAACAGAG...TGCATTGCTTCTATAAGTAACATGTGAATCCTGACAAGGGGGAAGAAGCAGATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
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| CDS-3UTR CAA 90 bp | CATCTTTTCCTGCCTGGATTTATAATATCTTCCTTAAACCTTCCCCCTTCATATCCAGAAGGCCAGTCCTaGCAGGTACTGAGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HLFLPGFIISSLNLPPSYPEGQS*QVLSSS Trigger: GCTGCTGCTCAGTACCTGCAAGGACTGGCCTTCTGG...ATATGAAGGGGGAAGGTTTAAGGAAGATATTATAAATCCAGGCAGGAAAAGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
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| CDS-3UTR CAA 90 bp | AATAGGTACTCGAAAGGGGAAAGTAGCACATTGTGTTTGCTAATCATTAGAATTGCTCAGGGACACTCCTaGCCAGAAGGCCAGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: NRYSKGESSTLCLLIIRIAQGHS*PEGQSL Trigger: CAAGGACTGGCCTTCTGGCAAGGAGTGTCCCTGAGC...AATTCTAATGATTAGCAAACACAATGTGCTACTTTCCCCTTTCGAGTACCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
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| CDS CCA 72 bp | TCGCGGGGAGCAAAGCCGCTGGGCACCGGGCGGAGCTaGAAGTCGGCGCGGGGCAGCTGGTGGAGGAGATGC | + |
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Preference number: 6 (lower is better) Translates to: SRGAKPLGTGRS*KSARGSWWRRC Trigger: GCATCTCCTCCACCAGCTGCCCCGCGCCGACTTCCAGCTCCGCCCGGTGCCCAGCGGCTTTGCTCCCCGCGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 ENSMUST00000153673.8 ENSMUST00000206987.2 |
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| CDS GCA 72 bp | TCCTGGGTGGGAAGAGGGCCCAGGCGCGGGGCAGGCTaGACAGAGTGGTGGCTAGGGCCCCCGCAGACAGGA | + |
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Preference number: 6 (lower is better) Translates to: SWVGRGPRRGAG*TEWWLGPPQTG Trigger: TCCTGTCTGCGGGGGCCCTAGCCACCACTCTGTGCAGCCTGCCCCGCGCCTGGGCCCTCTTCCCACCCAGGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079415.12 |
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| CDS CCA 72 bp | AAGGCTGCCACCAGCAGCAGGGCCTGCTGGTACTCTTaGTCGCGGGGAGCAAAGCCGCTGGGCACCGGGCGG | + |
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Preference number: 6 (lower is better) Translates to: KAATSSRACWYS*SRGAKPLGTGR Trigger: CCGCCCGGTGCCCAGCGGCTTTGCTCCCCGCGACCAAGAGTACCAGCAGGCCCTGCTGCTGGTGGCAGCCTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 ENSMUST00000153673.8 ENSMUST00000206987.2 |
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| CDS CAA 72 bp | CAAGGCTGCCACCAGCAGCAGGGCCTGCTGGTACTCTaGGTCGCGGGGAGCAAAGCCGCTGGGCACCGGGCG | + |
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Preference number: 6 (lower is better) Translates to: QGCHQQQGLLVL*VAGSKAAGHRA Trigger: CGCCCGGTGCCCAGCGGCTTTGCTCCCCGCGACCAAGAGTACCAGCAGGCCCTGCTGCTGGTGGCAGCCTTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 ENSMUST00000153673.8 ENSMUST00000206987.2 |
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| CDS CAA 90 bp | AAGCCCAGCCAAGGCTGCCACCAGCAGCAGGGCCTGCTGGTACTCTaGGTCGCGGGGAGCAAAGCCGCTGGGCACCGGGCGGAGCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: KPSQGCHQQQGLLVL*VAGSKAAGHRAELE Trigger: TTCCAGCTCCGCCCGGTGCCCAGCGGCTTTGCTCCCCGCGACCAAGAGTACCAGCAGGCCCTGCTGCTGGTGGCAGCCTTGGCTGGGCTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 ENSMUST00000153673.8 ENSMUST00000206987.2 |
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| CDS CCA 72 bp | AGCCCAGCCAAGGCTGCCACCAGCAGCAGGGCCTGCTaGTACTCTTGGTCGCGGGGAGCAAAGCCGCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: SPAKAATSSRAC*YSWSRGAKPLG Trigger: GCCCAGCGGCTTTGCTCCCCGCGACCAAGAGTACCAGCAGGCCCTGCTGCTGGTGGCAGCCTTGGCTGGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 ENSMUST00000153673.8 ENSMUST00000206987.2 |
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| CDS TCA 72 bp | CACAGCCCACGAGAAGGGCAGCAATGCAGCTCCAGGTaGCGCAACCTCCTCCGGGTGGGGGACTCTTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: HSPREGQQCSSR*RNLLRVGDSWP Trigger: GGGCCAAGAGTCCCCCACCCGGAGGAGGTTGCGTCACCTGGAGCTGCATTGCTGCCCTTCTCGTGGGCTGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 |
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| CDS TCA 72 bp | ACCAGCCCACGAGAAGGGCAGCAATGCAGCTCCAGGTaGCGCAACCTCCTCCGGGTGGGGGACTCTTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: TSPREGQQCSSR*RNLLRVGDSWP Trigger: GGGCCAAGAGTCCCCCACCCGGAGGAGGTTGCGTCACCTGGAGCTGCATTGCTGCCCTTCTCGTGGGCTGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153673.8 |
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| CDS TCA 72 bp | GGCTCCCCTGGTGGCAGCCACCAGCTCCATGCGGACTaGCAGCACTTCCTCCAGGGTGGTCAGCTCCGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GSPGGSHQLHAD*QHFLQGGQLRL Trigger: AAGACGGAGCTGACCACCCTGGAGGAAGTGCTGTCAGTCCGCATGGAGCTGGTGGCTGCCACCAGGGGAGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079415.12 ENSMUST00000119661.8 ENSMUST00000129423.8 ENSMUST00000206869.2 |
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| CDS TCA 72 bp | AATGCCGGCAGAGAAGGGCAGCAATGCAGCTCCAGGTaGCGCAACCTCCTCCGGGTGGGGGACTCTTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: NAGREGQQCSSR*RNLLRVGDSWP Trigger: GGGCCAAGAGTCCCCCACCCGGAGGAGGTTGCGTCACCTGGAGCTGCATTGCTGCCCTTCTCTGCCGGCATT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206987.2 |
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| CDS GCA 72 bp | AGGCTCCAGACTGGAGGGGAGGCTCAGATGGAAGACTaGCACTGCACAAAGCGTTTGGATTCCTGGGTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: RLQTGGEAQMED*HCTKRLDSWVG Trigger: TCCCACCCAGGAATCCAAACGCTTTGTGCAGTGGCAGTCTTCCATCTGAGCCTCCCCTCCAGTCTGGAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079415.12 |
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