Pregenerated sensors for TTR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061808Ensembl transcript IDs: ENSMUST00000075312.5
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTGCTAACACGGTTTATAGAGCAAGAACACTGTTTTGGTACAAATaGGATGCTACTGCTTTGGCAAGATCCTGGTCCTCCTGGGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: AANTVYRARTLFWYK*DATALARSWSSWAE Trigger: CTCAGCCCAGGAGGACCAGGATCTTGCCAAAGCAGTAGCATCCCATTTGTACCAAAACAGTGTTCTTGCTCTATAAACCGTGTTAGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| 3UTR CCA 90 bp | CAGACCATGCTTAGTGTATGTTTTGCTTGTAAAACATTGAACGGTTaGTCCACTCTGCTTTCTGACCTATCTTCCTCAAGCAAGTTGCCA | + |
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Preference number: 1 (lower is better) Translates to: QTMLSVCFACKTLNG*STLLSDLSSSSKLP Trigger: TGGCAACTTGCTTGAGGAAGATAGGTCAGAAAGCAGAGTGGACCAACCGTTCAATGTTTTACAAGCAAAACATACACTAAGCATGGTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| 3UTR-3UTR TCA 90 bp | TCTGACCTATCTTCCTCAAGCAAGTTGCCAGGAGCACCCATGACCTCCCCAAGATTCACGGCATCTTCCTaGGCTGCTAACACGGTTTAT | + |
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Preference number: 2 (lower is better) Translates to: SDLSSSSKLPGAPMTSPRFTASS*AANTVY Trigger: ATAAACCGTGTTAGCAGCTCAGGAAGATGCCGTGAA...TCTTGGGGAGGTCATGGGTGCTCCTGGCAACTTGCTTGAGGAAGATAGGTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| 3UTR-3UTR CCA 90 bp | CTGTGCATCTACAGCCCTTCAGATTGTGTGCTTTTAATAGCTACAGACCATGCTGCTTTGGCAAGATCCTaGTCCTCCTGGGCTGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: LCIYSPSDCVLLIATDHAALARS*SSWAES Trigger: AGACTCAGCCCAGGAGGACCAGGATCTTGCCAAAGC...AGCATGGTCTGTAGCTATTAAAAGCACACAATCTGAAGGGCTGTAGATGCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| 3UTR-3UTR GCA 90 bp | GTGATTGAACCCAGGGCTTTTGAACATGCTCTGGGAAAACACTACTGTGCATCTTTGGTACAAATGGGATaGTACTGCTTTGGCAAGATC | + |
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Preference number: 2 (lower is better) Translates to: VIEPRAFEHALGKHYCASLVQMG*YCFGKI Trigger: GATCTTGCCAAAGCAGTAGCATCCCATTTGTACCAA...AGATGCACAGTAGTGTTTTCCCAGAGCATGTTCAAAAGCCCTGGGTTCAATCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| 3UTR-3UTR CCA 90 bp | GTGCATCTACAGCCCTTCAGATTGTGTGCTTTTAATAGCTACAGACCATGCTTAGCAAGAACACTGTTTTaGTACAAATGGGATGCTACT | + |
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Preference number: 2 (lower is better) Translates to: VHLQPFRLCAFNSYRPCLARTLF*YKWDAT Trigger: AGTAGCATCCCATTTGTACCAAAACAGTGTTCTTGC...TAAGCATGGTCTGTAGCTATTAAAAGCACACAATCTGAAGGGCTGTAGATGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| 3UTR TCA 72 bp | ACCTATCTTCCTCAAGCAAGTTGCCAGGAGCACCCATaGCCTCCCCAAGATGGAAAGGATGCCTTTAAACCA | + |
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Preference number: 3 (lower is better) Translates to: TYLPQASCQEHP*PPQDGKDAFKP Trigger: TGGTTTAAAGGCATCCTTTCCATCTTGGGGAGGTCATGGGTGCTCCTGGCAACTTGCTTGAGGAAGATAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| 3UTR CCA 72 bp | ACGGTTTATAGAGCAAGAACACTGTTTTGGTACAAATaGGATGCTACTGCTTTGGCAAGATCCTGGTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: TVYRARTLFWYK*DATALARSWSS Trigger: GGAGGACCAGGATCTTGCCAAAGCAGTAGCATCCCATTTGTACCAAAACAGTGTTCTTGCTCTATAAACCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| 3UTR-3UTR CAA 90 bp | CTGTGCATCTACAGCCCTTCAGATTGTGTGCTTTTAATAGCTACAGACCATGCTAGCAAGAACACTGTTTaGGTACAAATGGGATGCTAC | + |
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Preference number: 3 (lower is better) Translates to: LCIYSPSDCVLLIATDHASKNTV*VQMGCY Trigger: GTAGCATCCCATTTGTACCAAAACAGTGTTCTTGCT...AGCATGGTCTGTAGCTATTAAAAGCACACAATCTGAAGGGCTGTAGATGCACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| 3UTR TCA 72 bp | AGACCATGCTTAGTGTATGTTTTGCTTGTAAAACATTaGACGGTTGGTCCACTCTGCTTTCTGACCTATCTT | + |
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Preference number: 3 (lower is better) Translates to: RPCLVYVLLVKH*TVGPLCFLTYL Trigger: AAGATAGGTCAGAAAGCAGAGTGGACCAACCGTTCAATGTTTTACAAGCAAAACATACACTAAGCATGGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| CDS-3UTR GCA 90 bp | TACAAATGGGATGCTACTGCTTTGGCAAGATCCTGGTCCTCCTGGGCTGAGTCTTCTGTGGTGAGCCCGTaGAGCTCTCCAGACTCCGCG | + |
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Preference number: 4 (lower is better) Translates to: YKWDATALARSWSSWAESSVVSP*SSPDSA Trigger: CGCGGAGTCTGGAGAGCTGCACGGGCTCACCACAGA...AGACTCAGCCCAGGAGGACCAGGATCTTGCCAAAGCAGTAGCATCCCATTTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| CDS-3UTR TCA 90 bp | ACATTGAACGGTTGGTCCACTCTGCTTTCTGACCTATCTTCCTCAAGCAAGTTGTGTAGGAGTATGGGCTaGGCAGGGCTGCGATGGTGT | + |
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Preference number: 4 (lower is better) Translates to: TLNGWSTLLSDLSSSSKLCRSMG*AGLRWC Trigger: ACACCATCGCAGCCCTGCTCAGCCCATACTCCTACA...CAACTTGCTTGAGGAAGATAGGTCAGAAAGCAGAGTGGACCAACCGTTCAATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| CDS-3UTR GCA 90 bp | ACGGTTGGTCCACTCTGCTTTCTGACCTATCTTCCTCAAGCAAGTTGCCAGGAGCATGGAACGGGGAAATaGCAAGTGTCTTCCAGTACG | + |
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Preference number: 4 (lower is better) Translates to: TVGPLCFLTYLPQASCQEHGTGK*QVSSST Trigger: CGTACTGGAAGACACTTGGCATTTCCCCGTTCCATG...CTCCTGGCAACTTGCTTGAGGAAGATAGGTCAGAAAGCAGAGTGGACCAACCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| CDS-3UTR CCA 90 bp | CTGTGCATCTACAGCCCTTCAGATTGTGTGCTTTTAATAGCTACAGACCATGCTGGTGCTGTAGGAGTATaGGCTGAGCAGGGCTGCGAT | + |
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Preference number: 4 (lower is better) Translates to: LCIYSPSDCVLLIATDHAGAVGV*AEQGCD Trigger: ATCGCAGCCCTGCTCAGCCCATACTCCTACAGCACC...AGCATGGTCTGTAGCTATTAAAAGCACACAATCTGAAGGGCTGTAGATGCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| CDS-3UTR TCA 90 bp | GTGCATCTACAGCCCTTCAGATTGTGTGCTTTTAATAGCTACAGACCATGCTTACAGCATCCAGGACTTTaGCCATCAGAGGACATTTGG | + |
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Preference number: 4 (lower is better) Translates to: VHLQPFRLCAFNSYRPCLQHPGL*PSEDIW Trigger: CCAAATGTCCTCTGATGGTCAAAGTCCTGGATGCTG...TAAGCATGGTCTGTAGCTATTAAAAGCACACAATCTGAAGGGCTGTAGATGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| 3UTR CAA 72 bp | TGGGAAAACACTACTGTGCATCTACAGCCCTTCAGATaGTGTGCTTTTAATAGCTACAGACCATGCTTAGTG | + |
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Preference number: 4 (lower is better) Translates to: WENTTVHLQPFR*CAFNSYRPCLV Trigger: CACTAAGCATGGTCTGTAGCTATTAAAAGCACACAATCTGAAGGGCTGTAGATGCACAGTAGTGTTTTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| 3UTR CAA 72 bp | CAGACCATGCTTAGTGTATGTTTTGCTTGTAAAACATaGAACGGTTGGTCCACTCTGCTTTCTGACCTATCT | + |
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Preference number: 4 (lower is better) Translates to: QTMLSVCFACKT*NGWSTLLSDLS Trigger: AGATAGGTCAGAAAGCAGAGTGGACCAACCGTTCAATGTTTTACAAGCAAAACATACACTAAGCATGGTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| CDS-3UTR CCA 90 bp | AACACGGTTTATAGAGCAAGAACACTGTTTTGGTACAAATGGGATGCTACTGCTTCTTCCAGTACGATTTaGTGTCCAGTTCTACTCTGT | + |
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Preference number: 4 (lower is better) Translates to: NTVYRARTLFWYKWDATASSSTI*CPVLLC Trigger: ACAGAGTAGAACTGGACACCAAATCGTACTGGAAGA...AGCAGTAGCATCCCATTTGTACCAAAACAGTGTTCTTGCTCTATAAACCGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| CDS TCA 90 bp | CAGCCACGTCTACAGCAGGGCTGCCTCGGACAGCATCCAGGACTTTaGCCATCAGAGGACATTTGGATTCTCCAGCACCCGCGGGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: QPRLQQGCLGQHPGL*PSEDIWILQHPRGQ Trigger: CTGGCCCCGCGGGTGCTGGAGAATCCAAATGTCCTCTGATGGTCAAAGTCCTGGATGCTGTCCGAGGCAGCCCTGCTGTAGACGTGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| CDS GCA 90 bp | GCTGACGACAGCCGTGGTGCTGTAGGAGTATGGGCTGAGCAGGGCTaGGATGGTGTAGTGGCGATGGCCAGAGTCGTTGGCTGTGAAAAC | + |
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Preference number: 5 (lower is better) Translates to: ADDSRGAVGVWAEQG*DGVVAMARVVGCEN Trigger: GTTTTCACAGCCAACGACTCTGGCCATCGCCACTACACCATCGCAGCCCTGCTCAGCCCATACTCCTACAGCACCACGGCTGTCGTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| CDS CCA 90 bp | TCAATTCTGGGGGTTGCTGACGACAGCCGTGGTGCTGTAGGAGTATaGGCTGAGCAGGGCTGCGATGGTGTAGTGGCGATGGCCAGAGTC | + |
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Preference number: 5 (lower is better) Translates to: SILGVADDSRGAVGV*AEQGCDGVVAMARV Trigger: GACTCTGGCCATCGCCACTACACCATCGCAGCCCTGCTCAGCCCATACTCCTACAGCACCACGGCTGTCGTCAGCAACCCCCAGAATTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| CDS TCA 90 bp | GCAGGGCTGCGATGGTGTAGTGGCGATGGCCAGAGTCGTTGGCTGTaGAAACCACATCCGCGAATTCATGGAACGGGGAAATGCCAAGTG | + |
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Preference number: 5 (lower is better) Translates to: AGLRWCSGDGQSRWL*KPHPRIHGTGKCQV Trigger: CACTTGGCATTTCCCCGTTCCATGAATTCGCGGATGTGGTTTTCACAGCCAACGACTCTGGCCATCGCCACTACACCATCGCAGCCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| CDS TCA 90 bp | TCTTCCCAGAGGCAAAGGGCTCCCAGGATCCCTCAGAGGTCTTTTTaGACACTTTTACAGCCACGTCTACAGCAGGGCTGCCTCGGACAG | + |
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Preference number: 5 (lower is better) Translates to: SSQRQRAPRIPQRSF*TLLQPRLQQGCLGQ Trigger: CTGTCCGAGGCAGCCCTGCTGTAGACGTGGCTGTAAAAGTGTTCAAAAAGACCTCTGAGGGATCCTGGGAGCCCTTTGCCTCTGGGAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| CDS TCA 90 bp | CCAGTTCTACTCTGTACACTCCTTCTACAAACTTCTCATCTGTGGTaGGCCCGTGCAGCTCTCCAGACTCCGCGGTCTTCCCAGAGGCAA | + |
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Preference number: 5 (lower is better) Translates to: PVLLCTLLLQTSHLW*ARAALQTPRSSQRQ Trigger: TTGCCTCTGGGAAGACCGCGGAGTCTGGAGAGCTGCACGGGCTCACCACAGATGAGAAGTTTGTAGAAGGAGTGTACAGAGTAGAACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| CDS-3UTR CAA 90 bp | TCTGACCTATCTTCCTCAAGCAAGTTGCCAGGAGCACCCATGACCTCCCCAAGAACAGCATCCAGGACTTaGACCATCAGAGGACATTTG | + |
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Preference number: 5 (lower is better) Translates to: SDLSSSSKLPGAPMTSPRTASRT*TIRGHL Trigger: CAAATGTCCTCTGATGGTCAAAGTCCTGGATGCTGT...TCTTGGGGAGGTCATGGGTGCTCCTGGCAACTTGCTTGAGGAAGATAGGTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| CDS-3UTR CAA 90 bp | GTGCATCTACAGCCCTTCAGATTGTGTGCTTTTAATAGCTACAGACCATGCTTAACCATCAGAGGACATTaGGATTCTCCAGCACCCGCG | + |
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Preference number: 5 (lower is better) Translates to: VHLQPFRLCAFNSYRPCLTIRGH*DSPAPA Trigger: CGCGGGTGCTGGAGAATCCAAATGTCCTCTGATGGT...TAAGCATGGTCTGTAGCTATTAAAAGCACACAATCTGAAGGGCTGTAGATGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| CDS CCA 90 bp | CGAATTCATGGAACGGGGAAATGCCAAGTGTCTTCCAGTACGATTTaGTGTCCAGTTCTACTCTGTACACTCCTTCTACAAACTTCTCAT | + |
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Preference number: 5 (lower is better) Translates to: RIHGTGKCQVSSSTI*CPVLLCTLLLQTSH Trigger: ATGAGAAGTTTGTAGAAGGAGTGTACAGAGTAGAACTGGACACCAAATCGTACTGGAAGACACTTGGCATTTCCCCGTTCCATGAATTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| CDS GCA 72 bp | AGCCGTGGTGCTGTAGGAGTATGGGCTGAGCAGGGCTaGGATGGTGTAGTGGCGATGGCCAGAGTCGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: SRGAVGVWAEQG*DGVVAMARVVG Trigger: GCCAACGACTCTGGCCATCGCCACTACACCATCGCAGCCCTGCTCAGCCCATACTCCTACAGCACCACGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| CDS CCA 72 bp | GGGGTTGCTGACGACAGCCGTGGTGCTGTAGGAGTATaGGCTGAGCAGGGCTGCGATGGTGTAGTGGCGATG | + |
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Preference number: 6 (lower is better) Translates to: GVADDSRGAVGV*AEQGCDGVVAM Trigger: CATCGCCACTACACCATCGCAGCCCTGCTCAGCCCATACTCCTACAGCACCACGGCTGTCGTCAGCAACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| CDS CAA 90 bp | ACAGCCACGTCTACAGCAGGGCTGCCTCGGACAGCATCCAGGACTTaGACCATCAGAGGACATTTGGATTCTCCAGCACCCGCGGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: TATSTAGLPRTASRT*TIRGHLDSPAPAGP Trigger: TGGCCCCGCGGGTGCTGGAGAATCCAAATGTCCTCTGATGGTCAAAGTCCTGGATGCTGTCCGAGGCAGCCCTGCTGTAGACGTGGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| CDS TCA 72 bp | CTACAGCAGGGCTGCCTCGGACAGCATCCAGGACTTTaGCCATCAGAGGACATTTGGATTCTCCAGCACCCG | + |
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Preference number: 6 (lower is better) Translates to: LQQGCLGQHPGL*PSEDIWILQHP Trigger: CGGGTGCTGGAGAATCCAAATGTCCTCTGATGGTCAAAGTCCTGGATGCTGTCCGAGGCAGCCCTGCTGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| CDS CAA 90 bp | GTCTTCCCAGAGGCAAAGGGCTCCCAGGATCCCTCAGAGGTCTTTTaGAACACTTTTACAGCCACGTCTACAGCAGGGCTGCCTCGGACA | + |
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Preference number: 6 (lower is better) Translates to: VFPEAKGSQDPSEVF*NTFTATSTAGLPRT Trigger: TGTCCGAGGCAGCCCTGCTGTAGACGTGGCTGTAAAAGTGTTCAAAAAGACCTCTGAGGGATCCTGGGAGCCCTTTGCCTCTGGGAAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| CDS TCA 72 bp | CTCTGTACACTCCTTCTACAAACTTCTCATCTGTGGTaGGCCCGTGCAGCTCTCCAGACTCCGCGGTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: LCTLLLQTSHLW*ARAALQTPRSS Trigger: GGAAGACCGCGGAGTCTGGAGAGCTGCACGGGCTCACCACAGATGAGAAGTTTGTAGAAGGAGTGTACAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| CDS TCA 72 bp | CGATGGTGTAGTGGCGATGGCCAGAGTCGTTGGCTGTaGAAACCACATCCGCGAATTCATGGAACGGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: RWCSGDGQSRWL*KPHPRIHGTGK Trigger: TTTCCCCGTTCCATGAATTCGCGGATGTGGTTTTCACAGCCAACGACTCTGGCCATCGCCACTACACCATCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| CDS CCA 72 bp | GAGTCGTTGGCTGTGAAAACCACATCCGCGAATTCATaGAACGGGGAAATGCCAAGTGTCTTCCAGTACGAT | + |
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Preference number: 6 (lower is better) Translates to: ESLAVKTTSANS*NGEMPSVFQYD Trigger: ATCGTACTGGAAGACACTTGGCATTTCCCCGTTCCATGAATTCGCGGATGTGGTTTTCACAGCCAACGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| CDS CCA 72 bp | GGAACGGGGAAATGCCAAGTGTCTTCCAGTACGATTTaGTGTCCAGTTCTACTCTGTACACTCCTTCTACAA | + |
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Preference number: 6 (lower is better) Translates to: GTGKCQVSSSTI*CPVLLCTLLLQ Trigger: TTGTAGAAGGAGTGTACAGAGTAGAACTGGACACCAAATCGTACTGGAAGACACTTGGCATTTCCCCGTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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| CDS CAA 90 bp | GCGAATTCATGGAACGGGGAAATGCCAAGTGTCTTCCAGTACGATTaGGTGTCCAGTTCTACTCTGTACACTCCTTCTACAAACTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: ANSWNGEMPSVFQYD*VSSSTLYTPSTNFS Trigger: TGAGAAGTTTGTAGAAGGAGTGTACAGAGTAGAACTGGACACCAAATCGTACTGGAAGACACTTGGCATTTCCCCGTTCCATGAATTCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075312.5 |
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