Pregenerated sensors for TTPAL (Mus musculus)

Ensembl gene IDs: ENSMUSG00000017679

Ensembl transcript IDs: ENSMUST00000109405.10, ENSMUST00000109408.10, ENSMUST00000156839.2, ENSMUST00000171696.8

Found 198 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	TCCAGGAGGCAGTGTCCAGCTCCCCAGCTGTGCCCCCATACTCCTTaGGGAGGATATTCCTTGGCAGGTTTGTGTGGAGAGAGTTCAGGT	+
Preference number: 1 (lower is better) Translates to: SRRQCPAPQLCPHTP*GGYSLAGLCGESSG Trigger: ACCTGAACTCTCTCCACACAAACCTGCCAAGGAATATCCTCCCCAAGGAGTATGGGGGCACAGCTGGGGAGCTGGACACTGCCTCCTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109405.10
3UTR CCA 90 bp	GGCAGCTCCATGCTGTTGCAGAGGGATGGAGCAAGACGGAGGTCCTaGCATCTCAGCCTGTGCATTTCTAAGGAAGGAAGGAAGGAATCA	+
Preference number: 1 (lower is better) Translates to: GSSMLLQRDGARRRS*HLSLCISKEGRKES Trigger: TGATTCCTTCCTTCCTTCCTTAGAAATGCACAGGCTGAGATGCCAGGACCTCCGTCTTGCTCCATCCCTCTGCAACAGCATGGAGCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
3UTR CCA 90 bp	AAGAGGGCTAATAGCAGGAGTAGAGCTGGGACTTCATGGCTCGCATaGAGTCATCACACTGCGCATCTGAGATCAGCCCCTCAGGTAGCA	+
Preference number: 1 (lower is better) Translates to: KRANSRSRAGTSWLA*SHHTAHLRSAPQVA Trigger: TGCTACCTGAGGGGCTGATCTCAGATGCGCAGTGTGATGACTCCATGCGAGCCATGAAGTCCCAGCTCTACTCCTGCTATTAGCCCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109405.10
3UTR CCA 90 bp	GTGCCCCCATACTCCTTGGGGAGGATATTCCTTGGCAGGTTTGTGTaGAGAGAGTTCAGGTCAGACCCATGGAGGAAGAACCTGTTAGCA	+
Preference number: 1 (lower is better) Translates to: VPPYSLGRIFLGRFV*REFRSDPWRKNLLA Trigger: TGCTAACAGGTTCTTCCTCCATGGGTCTGACCTGAACTCTCTCCACACAAACCTGCCAAGGAATATCCTCCCCAAGGAGTATGGGGGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109405.10
3UTR TCA 90 bp	CAGGAGAGCAGAAAGCAGGTTTACAAAGTGAACAGACTGCAGTACTaGGCCTCACCAAGATGTCTCCCAACAGCTCATGTGTCTGGTGTT	+
Preference number: 1 (lower is better) Translates to: QESRKQVYKVNRLQY*ASPRCLPTAHVSGV Trigger: AACACCAGACACATGAGCTGTTGGGAGACATCTTGGTGAGGCTCAGTACTGCAGTCTGTTCACTTTGTAAACCTGCTTTCTGCTCTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR GCA 90 bp	GGTCGGCCTCACCAAAGCCATCCCTTTCAAGTTTACCCATTATTCTaGAAAGGCAGTTGGTCTCCACCAACTCCCAGGAACATACTAGTT	+
Preference number: 1 (lower is better) Translates to: GRPHQSHPFQVYPLF*KGSWSPPTPRNILV Trigger: AACTAGTATGTTCCTGGGAGTTGGTGGAGACCAACTGCCTTTGCAGAATAATGGGTAAACTTGAAAGGGATGGCTTTGGTGAGGCCGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR CCA 90 bp	GAAAATAGCCCAGTTCCCACCCATCAGAGAGGGTATCTGAGGTCTTaGCCACTGAGAAGTTTCAAGTATTTTACCTGTTGGGCCCTTTGT	+
Preference number: 1 (lower is better) Translates to: ENSPVPTHQRGYLRS*PLRSFKYFTCWALC Trigger: ACAAAGGGCCCAACAGGTAAAATACTTGAAACTTCTCAGTGGCCAAGACCTCAGATACCCTCTCTGATGGGTGGGAACTGGGCTATTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR TCA 90 bp	CAAGAGCCTGGTTGTCCCTTTGTTAAGTCAGGAGAACTAGTCAGGTaGCACAATTTAAATTCAGGGAACCCAGTGGGACTGAGGTTTTCC	+
Preference number: 1 (lower is better) Translates to: QEPGCPFVKSGELVR*HNLNSGNPVGLRFS Trigger: GGAAAACCTCAGTCCCACTGGGTTCCCTGAATTTAAATTGTGTCACCTGACTAGTTCTCCTGACTTAACAAAGGGACAACCAGGCTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR CCA 90 bp	ACCTACATGATTCCATGGAGAACCAGAGCTAAGGCTTTATGGGGTTaGGAAAAGTTTCTATTGCAAGATTTAACCCTGGACTCCCAGGGA	+
Preference number: 1 (lower is better) Translates to: TYMIPWRTRAKALWG*EKFLLQDLTLDSQG Trigger: TCCCTGGGAGTCCAGGGTTAAATCTTGCAATAGAAACTTTTCCCAACCCCATAAAGCCTTAGCTCTGGTTCTCCATGGAATCATGTAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
3UTR CCA 90 bp	ATGCTGACCTACATGATTCCATGGAGAACCAGAGCTAAGGCTTTATaGGGTTGGGAAAAGTTTCTATTGCAAGATTTAACCCTGGACTCC	+
Preference number: 1 (lower is better) Translates to: MLTYMIPWRTRAKAL*GWEKFLLQDLTLDS Trigger: GGAGTCCAGGGTTAAATCTTGCAATAGAAACTTTTCCCAACCCCATAAAGCCTTAGCTCTGGTTCTCCATGGAATCATGTAGGTCAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
3UTR TCA 90 bp	AAAGTTTCTATTGCAAGATTTAACCCTGGACTCCCAGGGATGCTTTaGAGCCTTTGGCTTCCAAATTTGATCTTAAGTACTACCTGGGCC	+
Preference number: 1 (lower is better) Translates to: KVSIARFNPGLPGML*SLWLPNLILSTTWA Trigger: GGCCCAGGTAGTACTTAAGATCAAATTTGGAAGCCAAAGGCTTCAAAGCATCCCTGGGAGTCCAGGGTTAAATCTTGCAATAGAAACTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
3UTR GCA 90 bp	TTTCCAAGATGCATAAGAAACAGATACAGCTTCCAGAGTAACAGCTaGAAACTTAAGAGTACACCAGGGCAATTTCCATGTCTTCCCTGG	+
Preference number: 1 (lower is better) Translates to: FPRCIRNRYSFQSNS*KLKSTPGQFPCLPW Trigger: CCAGGGAAGACATGGAAATTGCCCTGGTGTACTCTTAAGTTTGCAGCTGTTACTCTGGAAGCTGTATCTGTTTCTTATGCATCTTGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
3UTR-3UTR TCA 90 bp	GTGAAGCGTCTAGCACTTTACCCCAAAGTCAGATACTCCCAGGTTCTTGCTCACGGCAGGGCCCCCAGGTaGACCAGCAATAGCCTGCTC	+
Preference number: 2 (lower is better) Translates to: VKRLALYPKVRYSQVLAHGRAPR*TSNSLL Trigger: GAGCAGGCTATTGCTGGTTCACCTGGGGGCCCTGCC...GTGAGCAAGAACCTGGGAGTATCTGACTTTGGGGTAAAGTGCTAGACGCTTCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR CAA 90 bp	GAGGCCTTCGTCTCCCCTGCTGCTCAACATAAGAGTTGCTTTATTTaGCACCAGGAGGTCCTGGTCTCACAGCCTGCTTCAAAGCTGAGG	+
Preference number: 2 (lower is better) Translates to: EAFVSPAAQHKSCFI*HQEVLVSQPASKLR Trigger: CCTCAGCTTTGAAGCAGGCTGTGAGACCAGGACCTCCTGGTGCAAAATAAAGCAACTCTTATGTTGAGCAGCAGGGGAGACGAAGGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR TCA 90 bp	TGCAGTACTGAGCCTCACCAAGATGTCTCCCAACAGCTCATGTGTCTGGTGTTTCACAAAATCCTCCTCTaGGGCCAGCAGCACGGCGTT	+
Preference number: 2 (lower is better) Translates to: CSTEPHQDVSQQLMCLVFHKILL*GQQHGV Trigger: AACGCCGTGCTGCTGGCCTCAGAGGAGGATTTTGTG...AAACACCAGACACATGAGCTGTTGGGAGACATCTTGGTGAGGCTCAGTACTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109405.10
3UTR-3UTR TCA 90 bp	ACCCCAAAGTCAGATACTCCCAGGTTCTTGCTCACTTGCTGGCTCCACCAGTGTTCAAAGGTCTGCCTGTaGTGGGCGTGCCTTAAATCT	+
Preference number: 2 (lower is better) Translates to: TPKSDTPRFLLTCWLHQCSKVCL*WACLKS Trigger: AGATTTAAGGCACGCCCATCACAGGCAGACCTTTGA...ACACTGGTGGAGCCAGCAAGTGAGCAAGAACCTGGGAGTATCTGACTTTGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR GCA 90 bp	ACAGACTGCAGTACTGAGCCTCACCAAGATGTCTCCCAACAGCTCATGTGTCTGCGTGCCTTAAATCTCTaGAGGCAGCTCCATGCTGTT	+
Preference number: 2 (lower is better) Translates to: TDCSTEPHQDVSQQLMCLRALNL*RQLHAV Trigger: AACAGCATGGAGCTGCCTGCAGAGATTTAAGGCACG...CAGACACATGAGCTGTTGGGAGACATCTTGGTGAGGCTCAGTACTGCAGTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR CCA 90 bp	CACAAACCAGTAAATGTGATTCCAGCTGCAAATTCCACTGGACCTTCCTGTGGAGCTGTTGCAGAGGGATaGAGCAAGACGGAGGTCCTG	+
Preference number: 2 (lower is better) Translates to: HKPVNVIPAANSTGPSCGAVAEG*SKTEVL Trigger: CAGGACCTCCGTCTTGCTCCATCCCTCTGCAACAGC...TCCACAGGAAGGTCCAGTGGAATTTGCAGCTGGAATCACATTTACTGGTTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR TCA 90 bp	CTTCCAAATTTGATCTTAAGTACTACCTGGGCCTGGGGTTTCTACCACTCAGTTTCCCAGGCCCAACAATaGCAACTGGGGCCTGAACCT	+
Preference number: 2 (lower is better) Translates to: LPNLILSTTWAWGFYHSVSQAQQ*QLGPEP Trigger: AGGTTCAGGCCCCAGTTGTCATTGTTGGGCCTGGGA...AACTGAGTGGTAGAAACCCCAGGCCCAGGTAGTACTTAAGATCAAATTTGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
3UTR-3UTR GCA 90 bp	ACCCCAAAGTCAGATACTCCCAGGTTCTTGCTCACTTGCTGGCTCCACCAGTGTGTAAGCTGTATGCAATaGCTGCTTAAGTCCAGGAGA	+
Preference number: 2 (lower is better) Translates to: TPKSDTPRFLLTCWLHQCVSCMQ*LLKSRR Trigger: TCTCCTGGACTTAAGCAGGCATTGCATACAGCTTAC...ACACTGGTGGAGCCAGCAAGTGAGCAAGAACCTGGGAGTATCTGACTTTGGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR CCA 90 bp	TGTTTCAGAGTTGTGATCAGTCAAGTTGTCTTCTCCTGGTCACTTCAGAGTGACGCTGTTGCAGAGGGATaGAGCAAGACGGAGGTCCTG	+
Preference number: 2 (lower is better) Translates to: CFRVVISQVVFSWSLQSDAVAEG*SKTEVL Trigger: CAGGACCTCCGTCTTGCTCCATCCCTCTGCAACAGC...GTCACTCTGAAGTGACCAGGAGAAGACAACTTGACTGATCACAACTCTGAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
3UTR-3UTR CCA 90 bp	CCACAAAGACCCTCATTCCATGTAGCCTCACTGAGAGATGACAAGCTGAAGCCCCCCAACAATGACAACTaGGGCCTGAACCTTGAACTT	+
Preference number: 2 (lower is better) Translates to: PQRPSFHVASLRDDKLKPPNNDN*GLNLEL Trigger: AAGTTCAAGGTTCAGGCCCCAGTTGTCATTGTTGGG...GGGCTTCAGCTTGTCATCTCTCAGTGAGGCTACATGGAATGAGGGTCTTTGTGG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
3UTR-3UTR CCA 90 bp	AGCCATCCCTTTCAAGTTTACCCATTATTCTGCAAAGGCAGTTGGTCTCCACCATGTCGCAGGCAGGCATaGGCTGGCAGAACTCTTTCA	+
Preference number: 2 (lower is better) Translates to: SHPFQVYPLFCKGSWSPPCRRQA*AGRTLS Trigger: TGAAAGAGTTCTGCCAGCCCATGCCTGCCTGCGACA...TGGTGGAGACCAACTGCCTTTGCAGAATAATGGGTAAACTTGAAAGGGATGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109405.10
3UTR-3UTR CCA 90 bp	TGCAGTACTGAGCCTCACCAAGATGTCTCCCAACAGCTCATGTGTCTGGTGTTTGCTGAGGTGCCAAGATaGATCTCTAGAGTCCACAAG	+
Preference number: 2 (lower is better) Translates to: CSTEPHQDVSQQLMCLVFAEVPR*ISRVHK Trigger: CTTGTGGACTCTAGAGATCCATCTTGGCACCTCAGC...AAACACCAGACACATGAGCTGTTGGGAGACATCTTGGTGAGGCTCAGTACTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR TCA 90 bp	AACAAAAAGATCCAACCACCTCTAGGTAATGTCTTCCCAAGCAGAAGCCTAACATCCCAGGCCCAACAATaGCAACTGGGGCCTGAACCT	+
Preference number: 2 (lower is better) Translates to: NKKIQPPLGNVFPSRSLTSQAQQ*QLGPEP Trigger: AGGTTCAGGCCCCAGTTGTCATTGTTGGGCCTGGGA...TGTTAGGCTTCTGCTTGGGAAGACATTACCTAGAGGTGGTTGGATCTTTTTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
3UTR-3UTR TCA 90 bp	ATAGCGTCCTTACGGCCAGAGTCTGGTCAGGAACAGGATTCAGAGTTTAGCATAACCCAAACACAGAGCTaGCATTCAGTCCAAGTGGTC	+
Preference number: 2 (lower is better) Translates to: IASLRPESGQEQDSEFSITQTQS*HSVQVV Trigger: GACCACTTGGACTGAATGTCAGCTCTGTGTTTGGGT...TATGCTAAACTCTGAATCCTGTTCCTGACCAGACTCTGGCCGTAAGGACGCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR TCA 90 bp	TGCAGTACTGAGCCTCACCAAGATGTCTCCCAACAGCTCATGTGTCTGGTGTTTGGAACCCAGTGGGACTaGGGTTTTCCCTTTGTTTTT	+
Preference number: 2 (lower is better) Translates to: CSTEPHQDVSQQLMCLVFGTQWD*GFPFVF Trigger: AAAAACAAAGGGAAAACCTCAGTCCCACTGGGTTCC...AAACACCAGACACATGAGCTGTTGGGAGACATCTTGGTGAGGCTCAGTACTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR GCA 90 bp	TGTTTCAGAGTTGTGATCAGTCAAGTTGTCTTCTCCTGGTCACTTCAGAGTGACGCAGCTCCATGCTGTTaGAGAGGGATGGAGCAAGAC	+
Preference number: 2 (lower is better) Translates to: CFRVVISQVVFSWSLQSDAAPCC*RGMEQD Trigger: GTCTTGCTCCATCCCTCTGCAACAGCATGGAGCTGC...GTCACTCTGAAGTGACCAGGAGAAGACAACTTGACTGATCACAACTCTGAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
3UTR-3UTR GCA 90 bp	CTTCCAAATTTGATCTTAAGTACTACCTGGGCCTGGGGTTTCTACCACTCAGTTGCAGCTCCATGCTGTTaGAGAGGGATGGAGCAAGAC	+
Preference number: 2 (lower is better) Translates to: LPNLILSTTWAWGFYHSVAAPCC*RGMEQD Trigger: GTCTTGCTCCATCCCTCTGCAACAGCATGGAGCTGC...AACTGAGTGGTAGAAACCCCAGGCCCAGGTAGTACTTAAGATCAAATTTGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
3UTR-3UTR GCA 90 bp	CACAAACCAGTAAATGTGATTCCAGCTGCAAATTCCACTGGACCTTCCTGTGGAATGGAGTCATCACACTaGGCATCTGAGATCAGCCCC	+
Preference number: 2 (lower is better) Translates to: HKPVNVIPAANSTGPSCGMESSH*ASEISP Trigger: GGGGCTGATCTCAGATGCGCAGTGTGATGACTCCAT...TCCACAGGAAGGTCCAGTGGAATTTGCAGCTGGAATCACATTTACTGGTTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109405.10
3UTR-3UTR CCA 90 bp	ACCCCAAAGTCAGATACTCCCAGGTTCTTGCTCACTTGCTGGCTCCACCAGTGTAAAACAGCCCAAACCTaGCAATTACTGTGGCTGTTT	+
Preference number: 2 (lower is better) Translates to: TPKSDTPRFLLTCWLHQCKTAQT*QLLWLF Trigger: AAACAGCCACAGTAATTGCCAGGTTTGGGCTGTTTT...ACACTGGTGGAGCCAGCAAGTGAGCAAGAACCTGGGAGTATCTGACTTTGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR TCA 90 bp	CACAAACCAGTAAATGTGATTCCAGCTGCAAATTCCACTGGACCTTCCTGTGGATCAAAGGTCTGCCTGTaGTGGGCGTGCCTTAAATCT	+
Preference number: 2 (lower is better) Translates to: HKPVNVIPAANSTGPSCGSKVCL*WACLKS Trigger: AGATTTAAGGCACGCCCATCACAGGCAGACCTTTGA...TCCACAGGAAGGTCCAGTGGAATTTGCAGCTGGAATCACATTTACTGGTTTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR TCA 90 bp	CACAAACCAGTAAATGTGATTCCAGCTGCAAATTCCACTGGACCTTCCTGTGGACAACCGACTGACCTTTaGTCTCCAAGCACTGTGTGT	+
Preference number: 2 (lower is better) Translates to: HKPVNVIPAANSTGPSCGQPTDL*SPSTVC Trigger: ACACACAGTGCTTGGAGATCAAAGGTCAGTCGGTTG...TCCACAGGAAGGTCCAGTGGAATTTGCAGCTGGAATCACATTTACTGGTTTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR GCA 90 bp	CCACTGAGAAGTTTCAAGTATTTTACCTGTTGGGCCCTTTGTAATGTGCCAAGAGCAGCTCCATGCTGTTaGAGAGGGATGGAGCAAGAC	+
Preference number: 2 (lower is better) Translates to: PLRSFKYFTCWALCNVPRAAPCC*RGMEQD Trigger: GTCTTGCTCCATCCCTCTGCAACAGCATGGAGCTGC...TCTTGGCACATTACAAAGGGCCCAACAGGTAAAATACTTGAAACTTCTCAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR CCA 90 bp	CCACAAAGACCCTCATTCCATGTAGCCTCACTGAGAGATGACAAGCTGAAGCCCCAAGTTGTCTTCTCCTaGTCACTTCAGAGTGACTTT	+
Preference number: 2 (lower is better) Translates to: PQRPSFHVASLRDDKLKPQVVFS*SLQSDF Trigger: AAAGTCACTCTGAAGTGACCAGGAGAAGACAACTTG...GGGCTTCAGCTTGTCATCTCTCAGTGAGGCTACATGGAATGAGGGTCTTTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
3UTR-3UTR CCA 90 bp	AGCCATCCCTTTCAAGTTTACCCATTATTCTGCAAAGGCAGTTGGTCTCCACCAGGGGAGGATATTCCTTaGCAGGTTTGTGTGGAGAGA	+
Preference number: 2 (lower is better) Translates to: SHPFQVYPLFCKGSWSPPGEDIP*QVCVER Trigger: TCTCTCCACACAAACCTGCCAAGGAATATCCTCCCC...TGGTGGAGACCAACTGCCTTTGCAGAATAATGGGTAAACTTGAAAGGGATGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109405.10
3UTR-3UTR GCA 90 bp	TGTTTCAGAGTTGTGATCAGTCAAGTTGTCTTCTCCTGGTCACTTCAGAGTGACCGTGCCTTAAATCTCTaGAGGCAGCTCCATGCTGTT	+
Preference number: 2 (lower is better) Translates to: CFRVVISQVVFSWSLQSDRALNL*RQLHAV Trigger: AACAGCATGGAGCTGCCTGCAGAGATTTAAGGCACG...GTCACTCTGAAGTGACCAGGAGAAGACAACTTGACTGATCACAACTCTGAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
3UTR-3UTR CCA 90 bp	CCACAAAGACCCTCATTCCATGTAGCCTCACTGAGAGATGACAAGCTGAAGCCCTTTCCATGTCTTCCCTaGAATAACTCAGTCAAAGGT	+
Preference number: 2 (lower is better) Translates to: PQRPSFHVASLRDDKLKPFPCLP*NNSVKG Trigger: ACCTTTGACTGAGTTATTCCAGGGAAGACATGGAAA...GGGCTTCAGCTTGTCATCTCTCAGTGAGGCTACATGGAATGAGGGTCTTTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
3UTR-3UTR CCA 90 bp	TGCAGTACTGAGCCTCACCAAGATGTCTCCCAACAGCTCATGTGTCTGGTGTTTCAAGTTGTCTTCTCCTaGTCACTTCAGAGTGACTTT	+
Preference number: 2 (lower is better) Translates to: CSTEPHQDVSQQLMCLVFQVVFS*SLQSDF Trigger: AAAGTCACTCTGAAGTGACCAGGAGAAGACAACTTG...AAACACCAGACACATGAGCTGTTGGGAGACATCTTGGTGAGGCTCAGTACTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR CCA 90 bp	CCACTGAGAAGTTTCAAGTATTTTACCTGTTGGGCCCTTTGTAATGTGCCAAGATGCCCCCATACTCCTTaGGGAGGATATTCCTTGGCA	+
Preference number: 2 (lower is better) Translates to: PLRSFKYFTCWALCNVPRCPHTP*GGYSLA Trigger: TGCCAAGGAATATCCTCCCCAAGGAGTATGGGGGCA...TCTTGGCACATTACAAAGGGCCCAACAGGTAAAATACTTGAAACTTCTCAGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109405.10
3UTR-3UTR CCA 90 bp	CTTCCAAATTTGATCTTAAGTACTACCTGGGCCTGGGGTTTCTACCACTCAGTTCAGGCAGGCATGGGCTaGCAGAACTCTTTCACAAAA	+
Preference number: 2 (lower is better) Translates to: LPNLILSTTWAWGFYHSVQAGMG*QNSFTK Trigger: TTTTGTGAAAGAGTTCTGCCAGCCCATGCCTGCCTG...AACTGAGTGGTAGAAACCCCAGGCCCAGGTAGTACTTAAGATCAAATTTGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109405.10
3UTR-3UTR GCA 90 bp	AGGGTATCTGAGGTCTTGGCCACTGAGAAGTTTCAAGTATTTTACCTGTTGGGCGTACAAATCCACCTGTaGCTGAAGCCAGCACTTTTA	+
Preference number: 2 (lower is better) Translates to: RVSEVLATEKFQVFYLLGVQIHL*LKPALL Trigger: TAAAAGTGCTGGCTTCAGGCACAGGTGGATTTGTAC...GCCCAACAGGTAAAATACTTGAAACTTCTCAGTGGCCAAGACCTCAGATACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR CCA 90 bp	CTTCCAAATTTGATCTTAAGTACTACCTGGGCCTGGGGTTTCTACCACTCAGTTTTCAGGTCAGACCCATaGAGGAAGAACCTGTTAGCA	+
Preference number: 2 (lower is better) Translates to: LPNLILSTTWAWGFYHSVFRSDP*RKNLLA Trigger: TGCTAACAGGTTCTTCCTCCATGGGTCTGACCTGAA...AACTGAGTGGTAGAAACCCCAGGCCCAGGTAGTACTTAAGATCAAATTTGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109405.10
3UTR CAA 90 bp	CCAAAGCCATCCCTTTCAAGTTTACCCATTATTCTGCAAAGGCAGTaGGTCTCCACCAACTCCCAGGAACATACTAGTTTCTTTAAAGGG	+
Preference number: 2 (lower is better) Translates to: PKPSLSSLPIILQRQ*VSTNSQEHTSFFKG Trigger: CCCTTTAAAGAAACTAGTATGTTCCTGGGAGTTGGTGGAGACCAACTGCCTTTGCAGAATAATGGGTAAACTTGAAAGGGATGGCTTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR GCA 90 bp	CTCCAAGCACTGTGTGTAAGCTGTATGCAATGCCTGCTTAAGTCCAGGAGATGTTTCCAGAGTAACAGCTaGAAACTTAAGAGTACACCA	+
Preference number: 2 (lower is better) Translates to: LQALCVSCMQCLLKSRRCFQSNS*KLKSTP Trigger: TGGTGTACTCTTAAGTTTGCAGCTGTTACTCTGGAA...ACATCTCCTGGACTTAAGCAGGCATTGCATACAGCTTACACACAGTGCTTGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR CCA 90 bp	CACAAACCAGTAAATGTGATTCCAGCTGCAAATTCCACTGGACCTTCCTGTGGACAAGTTGTCTTCTCCTaGTCACTTCAGAGTGACTTT	+
Preference number: 2 (lower is better) Translates to: HKPVNVIPAANSTGPSCGQVVFS*SLQSDF Trigger: AAAGTCACTCTGAAGTGACCAGGAGAAGACAACTTG...TCCACAGGAAGGTCCAGTGGAATTTGCAGCTGGAATCACATTTACTGGTTTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR TCA 90 bp	AATGTGAACAGTACAAATCCACCTGTGCCTGAAGCCAGCACTTTTACTGTTTCTACCTCACTCAGTGCTTaGGTTAAGGCTAAAACCTTG	+
Preference number: 2 (lower is better) Translates to: NVNSTNPPVPEASTFTVSTSLSA*VKAKTL Trigger: CAAGGTTTTAGCCTTAACTCAAGCACTGAGTGAGGT...AGAAACAGTAAAAGTGCTGGCTTCAGGCACAGGTGGATTTGTACTGTTCACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR GCA 90 bp	CCACTGAGAAGTTTCAAGTATTTTACCTGTTGGGCCCTTTGTAATGTGCCAAGAGTAAGCTGTATGCAATaGCTGCTTAAGTCCAGGAGA	+
Preference number: 2 (lower is better) Translates to: PLRSFKYFTCWALCNVPRVSCMQ*LLKSRR Trigger: TCTCCTGGACTTAAGCAGGCATTGCATACAGCTTAC...TCTTGGCACATTACAAAGGGCCCAACAGGTAAAATACTTGAAACTTCTCAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR GCA 90 bp	CCACTGAGAAGTTTCAAGTATTTTACCTGTTGGGCCCTTTGTAATGTGCCAAGAAGAGTTGCTTTATTTTaGACCAGGAGGTCCTGGTCT	+
Preference number: 2 (lower is better) Translates to: PLRSFKYFTCWALCNVPRRVALF*TRRSWS Trigger: AGACCAGGACCTCCTGGTGCAAAATAAAGCAACTCT...TCTTGGCACATTACAAAGGGCCCAACAGGTAAAATACTTGAAACTTCTCAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR GCA 90 bp	CACAAACCAGTAAATGTGATTCCAGCTGCAAATTCCACTGGACCTTCCTGTGGAGCTCAACATAAGAGTTaGTTTATTTTGCACCAGGAG	+
Preference number: 2 (lower is better) Translates to: HKPVNVIPAANSTGPSCGAQHKS*FILHQE Trigger: CTCCTGGTGCAAAATAAAGCAACTCTTATGTTGAGC...TCCACAGGAAGGTCCAGTGGAATTTGCAGCTGGAATCACATTTACTGGTTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR GCA 90 bp	TGCAGTACTGAGCCTCACCAAGATGTCTCCCAACAGCTCATGTGTCTGGTGTTTTTTTATCTGTATTCCTaGATGAAGGCAGAAAACGTA	+
Preference number: 2 (lower is better) Translates to: CSTEPHQDVSQQLMCLVFFYLYS*MKAENV Trigger: TACGTTTTCTGCCTTCATGCAGGAATACAGATAAAA...AAACACCAGACACATGAGCTGTTGGGAGACATCTTGGTGAGGCTCAGTACTGCA 43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR CCA 90 bp	AGGGTATCTGAGGTCTTGGCCACTGAGAAGTTTCAAGTATTTTACCTGTTGGGCTTTCCATGTCTTCCCTaGAATAACTCAGTCAAAGGT	+
Preference number: 2 (lower is better) Translates to: RVSEVLATEKFQVFYLLGFPCLP*NNSVKG Trigger: ACCTTTGACTGAGTTATTCCAGGGAAGACATGGAAA...GCCCAACAGGTAAAATACTTGAAACTTCTCAGTGGCCAAGACCTCAGATACCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR CCA 90 bp	AGGGTATCTGAGGTCTTGGCCACTGAGAAGTTTCAAGTATTTTACCTGTTGGGCAGAGCTAAGGCTTTATaGGGTTGGGAAAAGTTTCTA	+
Preference number: 2 (lower is better) Translates to: RVSEVLATEKFQVFYLLGRAKAL*GWEKFL Trigger: TAGAAACTTTTCCCAACCCCATAAAGCCTTAGCTCT...GCCCAACAGGTAAAATACTTGAAACTTCTCAGTGGCCAAGACCTCAGATACCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR CCA 90 bp	CACAAACCAGTAAATGTGATTCCAGCTGCAAATTCCACTGGACCTTCCTGTGGAAGAGCTAAGGCTTTATaGGGTTGGGAAAAGTTTCTA	+
Preference number: 2 (lower is better) Translates to: HKPVNVIPAANSTGPSCGRAKAL*GWEKFL Trigger: TAGAAACTTTTCCCAACCCCATAAAGCCTTAGCTCT...TCCACAGGAAGGTCCAGTGGAATTTGCAGCTGGAATCACATTTACTGGTTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR TCA 90 bp	CCACTGAGAAGTTTCAAGTATTTTACCTGTTGGGCCCTTTGTAATGTGCCAAGAGGAGAACTAGTCAGGTaGCACAATTTAAATTCAGGG	+
Preference number: 2 (lower is better) Translates to: PLRSFKYFTCWALCNVPRGELVR*HNLNSG Trigger: CCCTGAATTTAAATTGTGTCACCTGACTAGTTCTCC...TCTTGGCACATTACAAAGGGCCCAACAGGTAAAATACTTGAAACTTCTCAGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR GCA 90 bp	GTCTTCTCCTGGTCACTTCAGAGTGACTTTGACCTTAGTTCTTTCCAAGATGCATTCCAGAGTAACAGCTaGAAACTTAAGAGTACACCA	+
Preference number: 2 (lower is better) Translates to: VFSWSLQSDFDLSSFQDAFQSNS*KLKSTP Trigger: TGGTGTACTCTTAAGTTTGCAGCTGTTACTCTGGAA...TGCATCTTGGAAAGAACTAAGGTCAAAGTCACTCTGAAGTGACCAGGAGAAGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
3UTR-3UTR GCA 90 bp	CTAAAGCTTAGCCAGGACCTAAAAGATCAACGATTAGCATCTAAAGTGAAAAGAGAACCAGCAATAGCCTaGTCCTGTATGTTTCCAGGG	+
Preference number: 2 (lower is better) Translates to: LKLSQDLKDQRLASKVKREPAIA*SCMFPG Trigger: CCCTGGAAACATACAGGAGCAGGCTATTGCTGGTTC...TCTTTTCACTTTAGATGCTAATCGTTGATCTTTTAGGTCCTGGCTAAGCTTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR CCA 90 bp	CCCAGGGATGCTTTGAAGCCTTTGGCTTCCAAATTTGATCTTAAGTACTACCTGTTTCCATGTCTTCCCTaGAATAACTCAGTCAAAGGT	+
Preference number: 2 (lower is better) Translates to: PRDALKPLASKFDLKYYLFPCLP*NNSVKG Trigger: ACCTTTGACTGAGTTATTCCAGGGAAGACATGGAAA...CAGGTAGTACTTAAGATCAAATTTGGAAGCCAAAGGCTTCAAAGCATCCCTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
3UTR-3UTR CCA 90 bp	CCACTGAGAAGTTTCAAGTATTTTACCTGTTGGGCCCTTTGTAATGTGCCAAGAAAAACAGCCCAAACCTaGCAATTACTGTGGCTGTTT	+
Preference number: 2 (lower is better) Translates to: PLRSFKYFTCWALCNVPRKTAQT*QLLWLF Trigger: AAACAGCCACAGTAATTGCCAGGTTTGGGCTGTTTT...TCTTGGCACATTACAAAGGGCCCAACAGGTAAAATACTTGAAACTTCTCAGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR GCA 90 bp	AATGTGAACAGTACAAATCCACCTGTGCCTGAAGCCAGCACTTTTACTGTTTCTGCTCAACATAAGAGTTaGTTTATTTTGCACCAGGAG	+
Preference number: 2 (lower is better) Translates to: NVNSTNPPVPEASTFTVSAQHKS*FILHQE Trigger: CTCCTGGTGCAAAATAAAGCAACTCTTATGTTGAGC...AGAAACAGTAAAAGTGCTGGCTTCAGGCACAGGTGGATTTGTACTGTTCACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR CCA 90 bp	GTTAATGTTCTATCCCTTTCTCTTCCAATATACCACATGACCTTGAATTTAGGACCCAACAATGACAACTaGGGCCTGAACCTTGAACTT	+
Preference number: 2 (lower is better) Translates to: VNVLSLSLPIYHMTLNLGPNNDN*GLNLEL Trigger: AAGTTCAAGGTTCAGGCCCCAGTTGTCATTGTTGGG...TCCTAAATTCAAGGTCATGTGGTATATTGGAAGAGAAAGGGATAGAACATTAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR GCA 90 bp	CCACTGAGAAGTTTCAAGTATTTTACCTGTTGGGCCCTTTGTAATGTGCCAAGATTTGATGGTGCTTCTTaGATTTTGAAGCTGAACATT	+
Preference number: 2 (lower is better) Translates to: PLRSFKYFTCWALCNVPRFDGAS*ILKLNI Trigger: AATGTTCAGCTTCAAAATGCAAGAAGCACCATCAAA...TCTTGGCACATTACAAAGGGCCCAACAGGTAAAATACTTGAAACTTCTCAGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR CCA 90 bp	GTTAATGTTCTATCCCTTTCTCTTCCAATATACCACATGACCTTGAATTTAGGAACCTACATGATTCCATaGAGAACCAGAGCTAAGGCT	+
Preference number: 2 (lower is better) Translates to: VNVLSLSLPIYHMTLNLGTYMIP*RTRAKA Trigger: AGCCTTAGCTCTGGTTCTCCATGGAATCATGTAGGT...TCCTAAATTCAAGGTCATGTGGTATATTGGAAGAGAAAGGGATAGAACATTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR TCA 90 bp	GTTAATGTTCTATCCCTTTCTCTTCCAATATACCACATGACCTTGAATTTAGGAGGAGAACTAGTCAGGTaGCACAATTTAAATTCAGGG	+
Preference number: 2 (lower is better) Translates to: VNVLSLSLPIYHMTLNLGGELVR*HNLNSG Trigger: CCCTGAATTTAAATTGTGTCACCTGACTAGTTCTCC...TCCTAAATTCAAGGTCATGTGGTATATTGGAAGAGAAAGGGATAGAACATTAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR CCA 72 bp	TGCGCATCTGAGATCAGCCCCTCAGGTAGCAGGGGCTaGCCCAGGAGGTTGTCGCAGGCAGGCATGGGCTGG	+
Preference number: 3 (lower is better) Translates to: CASEISPSGSRG*PRRLSQAGMGW Trigger: CCAGCCCATGCCTGCCTGCGACAACCTCCTGGGCCAGCCCCTGCTACCTGAGGGGCTGATCTCAGATGCGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109405.10
3UTR-3UTR CAA 90 bp	TGCAGTACTGAGCCTCACCAAGATGTCTCCCAACAGCTCATGTGTCTGGTGTTTGGCTGGCCCAGGAGGTaGTCGCAGGCAGGCATGGGC	+
Preference number: 3 (lower is better) Translates to: CSTEPHQDVSQQLMCLVFGWPRR*SQAGMG Trigger: GCCCATGCCTGCCTGCGACAACCTCCTGGGCCAGCC...AAACACCAGACACATGAGCTGTTGGGAGACATCTTGGTGAGGCTCAGTACTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109405.10
3UTR GCA 72 bp	GCGTGCCTTAAATCTCTGCAGGCAGCTCCATGCTGTTaGAGAGGGATGGAGCAAGACGGAGGTCCTGGCATC	+
Preference number: 3 (lower is better) Translates to: ACLKSLQAAPCC*RGMEQDGGPGI Trigger: GATGCCAGGACCTCCGTCTTGCTCCATCCCTCTGCAACAGCATGGAGCTGCCTGCAGAGATTTAAGGCACGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
3UTR CCA 72 bp	AATCTCTGCAGGCAGCTCCATGCTGTTGCAGAGGGATaGAGCAAGACGGAGGTCCTGGCATCTCAGCCTGTG	+
Preference number: 3 (lower is better) Translates to: NLCRQLHAVAEG*SKTEVLASQPV Trigger: CACAGGCTGAGATGCCAGGACCTCCGTCTTGCTCCATCCCTCTGCAACAGCATGGAGCTGCCTGCAGAGATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
3UTR CCA 72 bp	CAGTGTCCAGCTCCCCAGCTGTGCCCCCATACTCCTTaGGGAGGATATTCCTTGGCAGGTTTGTGTGGAGAG	+
Preference number: 3 (lower is better) Translates to: QCPAPQLCPHTP*GGYSLAGLCGE Trigger: CTCTCCACACAAACCTGCCAAGGAATATCCTCCCCAAGGAGTATGGGGGCACAGCTGGGGAGCTGGACACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109405.10
3UTR GCA 72 bp	AGCACTTTACCCCAAAGTCAGATACTCCCAGGTTCTTaGTCACTTGCTGGCTCCACCAGTGTGCTTCCCGCA	+
Preference number: 3 (lower is better) Translates to: STLPQSQILPGS*SLAGSTSVLPA Trigger: TGCGGGAAGCACACTGGTGGAGCCAGCAAGTGAGCAAGAACCTGGGAGTATCTGACTTTGGGGTAAAGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR CCA 72 bp	AATAGCAGGAGTAGAGCTGGGACTTCATGGCTCGCATaGAGTCATCACACTGCGCATCTGAGATCAGCCCCT	+
Preference number: 3 (lower is better) Translates to: NSRSRAGTSWLA*SHHTAHLRSAP Trigger: AGGGGCTGATCTCAGATGCGCAGTGTGATGACTCCATGCGAGCCATGAAGTCCCAGCTCTACTCCTGCTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109405.10
3UTR-3UTR CAA 90 bp	GCTTTGAAGCCTTTGGCTTCCAAATTTGATCTTAAGTACTACCTGGGCCTGGGGGGCAGCTCCATGCTGTaGCAGAGGGATGGAGCAAGA	+
Preference number: 3 (lower is better) Translates to: ALKPLASKFDLKYYLGLGGSSML*QRDGAR Trigger: TCTTGCTCCATCCCTCTGCAACAGCATGGAGCTGCC...CCCCAGGCCCAGGTAGTACTTAAGATCAAATTTGGAAGCCAAAGGCTTCAAAGC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
3UTR-3UTR CAA 90 bp	TGTGAAGCGTCTAGCACTTTACCCCAAAGTCAGATACTCCCAGGTTCTTGCTCAGTGCCCCCATACTCCTaGGGGAGGATATTCCTTGGC	+
Preference number: 3 (lower is better) Translates to: CEASSTLPQSQILPGSCSVPPYS*GRIFLG Trigger: GCCAAGGAATATCCTCCCCAAGGAGTATGGGGGCAC...TGAGCAAGAACCTGGGAGTATCTGACTTTGGGGTAAAGTGCTAGACGCTTCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109405.10
3UTR-3UTR CAA 90 bp	CACTTTACCCCAAAGTCAGATACTCCCAGGTTCTTGCTCACTTGCTGGCTCCACATTCTGCAAAGGCAGTaGGTCTCCACCAACTCCCAG	+
Preference number: 3 (lower is better) Translates to: HFTPKSDTPRFLLTCWLHILQRQ*VSTNSQ Trigger: CTGGGAGTTGGTGGAGACCAACTGCCTTTGCAGAAT...GTGGAGCCAGCAAGTGAGCAAGAACCTGGGAGTATCTGACTTTGGGGTAAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR CAA 90 bp	AGCCATCCCTTTCAAGTTTACCCATTATTCTGCAAAGGCAGTTGGTCTCCACCAGGCAGCTCCATGCTGTaGCAGAGGGATGGAGCAAGA	+
Preference number: 3 (lower is better) Translates to: SHPFQVYPLFCKGSWSPPGSSML*QRDGAR Trigger: TCTTGCTCCATCCCTCTGCAACAGCATGGAGCTGCC...TGGTGGAGACCAACTGCCTTTGCAGAATAATGGGTAAACTTGAAAGGGATGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR GCA 72 bp	GAGGTCCTGGTCTCACAGCCTGCTTCAAAGCTGAGGTaGCAAGATGGATCTCTAGAGTCCACAAGCATTAGT	+
Preference number: 3 (lower is better) Translates to: EVLVSQPASKLR*QDGSLESTSIS Trigger: ACTAATGCTTGTGGACTCTAGAGATCCATCTTGGCACCTCAGCTTTGAAGCAGGCTGTGAGACCAGGACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR CAA 90 bp	GGTGATTGTTTCAGAGTTGTGATCAGTCAAGTTGTCTTCTCCTGGTCACTTCAGGGCAGCTCCATGCTGTaGCAGAGGGATGGAGCAAGA	+
Preference number: 3 (lower is better) Translates to: GDCFRVVISQVVFSWSLQGSSML*QRDGAR Trigger: TCTTGCTCCATCCCTCTGCAACAGCATGGAGCTGCC...CTGAAGTGACCAGGAGAAGACAACTTGACTGATCACAACTCTGAAACAATCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
3UTR-3UTR CAA 90 bp	TGTGAAGCGTCTAGCACTTTACCCCAAAGTCAGATACTCCCAGGTTCTTGCTCATGGGGAGGATATTCCTaGGCAGGTTTGTGTGGAGAG	+
Preference number: 3 (lower is better) Translates to: CEASSTLPQSQILPGSCSWGGYS*AGLCGE Trigger: CTCTCCACACAAACCTGCCAAGGAATATCCTCCCCA...TGAGCAAGAACCTGGGAGTATCTGACTTTGGGGTAAAGTGCTAGACGCTTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109405.10
3UTR TCA 72 bp	TTTACCTGTTGGGCCCTTTGTAATGTGCCAAGAAGCTaGGGCACATCCACAAGAATCCAAAGCGGCTACCAG	+
Preference number: 3 (lower is better) Translates to: FTCWALCNVPRS*GTSTRIQSGYQ Trigger: CTGGTAGCCGCTTTGGATTCTTGTGGATGTGCCTCAGCTTCTTGGCACATTACAAAGGGCCCAACAGGTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR GCA 72 bp	CTTTATTTTGCACCAGGAGGTCCTGGTCTCACAGCCTaGTTCAAAGCTGAGGTGCCAAGATGGATCTCTAGA	+
Preference number: 3 (lower is better) Translates to: LYFAPGGPGLTA*FKAEVPRWISR Trigger: TCTAGAGATCCATCTTGGCACCTCAGCTTTGAAGCAGGCTGTGAGACCAGGACCTCCTGGTGCAAAATAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR CCA 72 bp	CAAACCAGTAAATGTGATTCCAGCTGCAAATTCCACTaGACCTTCCTGTGGAGCAAGTTCCCGCTGAGAAGC	+
Preference number: 3 (lower is better) Translates to: QTSKCDSSCKFH*TFLWSKFPLRS Trigger: GCTTCTCAGCGGGAACTTGCTCCACAGGAAGGTCCAGTGGAATTTGCAGCTGGAATCACATTTACTGGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR GCA 72 bp	CACCAAAGCCATCCCTTTCAAGTTTACCCATTATTCTaGAAAGGCAGTTGGTCTCCACCAACTCCCAGGAAC	+
Preference number: 3 (lower is better) Translates to: HQSHPFQVYPLF*KGSWSPPTPRN Trigger: GTTCCTGGGAGTTGGTGGAGACCAACTGCCTTTGCAGAATAATGGGTAAACTTGAAAGGGATGGCTTTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR CCA 72 bp	CTTAAGAGTACACCAGGGCAATTTCCATGTCTTCCCTaGAATAACTCAGTCAAAGGTCTGCCTGTGATGGGC	+
Preference number: 3 (lower is better) Translates to: LKSTPGQFPCLP*NNSVKGLPVMG Trigger: GCCCATCACAGGCAGACCTTTGACTGAGTTATTCCAGGGAAGACATGGAAATTGCCCTGGTGTACTCTTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
3UTR CCA 72 bp	GGCAGGTTTGTGTGGAGAGAGTTCAGGTCAGACCCATaGAGGAAGAACCTGTTAGCAATTTTCTCCTTCAGA	+
Preference number: 3 (lower is better) Translates to: GRFVWREFRSDP*RKNLLAIFSFR Trigger: TCTGAAGGAGAAAATTGCTAACAGGTTCTTCCTCCATGGGTCTGACCTGAACTCTCTCCACACAAACCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109405.10
3UTR CCA 72 bp	CCAGTTCCCACCCATCAGAGAGGGTATCTGAGGTCTTaGCCACTGAGAAGTTTCAAGTATTTTACCTGTTGG	+
Preference number: 3 (lower is better) Translates to: PVPTHQRGYLRS*PLRSFKYFTCW Trigger: CCAACAGGTAAAATACTTGAAACTTCTCAGTGGCCAAGACCTCAGATACCCTCTCTGATGGGTGGGAACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR CAA 90 bp	CACTTTACCCCAAAGTCAGATACTCCCAGGTTCTTGCTCACTTGCTGGCTCCACGCTTCTGTAGACATTTaGGGAAATGCTGTTAAGGGT	+
Preference number: 3 (lower is better) Translates to: HFTPKSDTPRFLLTCWLHASVDI*GNAVKG Trigger: ACCCTTAACAGCATTTCCCAAAATGTCTACAGAAGC...GTGGAGCCAGCAAGTGAGCAAGAACCTGGGAGTATCTGACTTTGGGGTAAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR TCA 72 bp	AGAAAGCAGGTTTACAAAGTGAACAGACTGCAGTACTaGGCCTCACCAAGATGTCTCCCAACAGCTCATGTG	+
Preference number: 3 (lower is better) Translates to: RKQVYKVNRLQY*ASPRCLPTAHV Trigger: CACATGAGCTGTTGGGAGACATCTTGGTGAGGCTCAGTACTGCAGTCTGTTCACTTTGTAAACCTGCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR CCA 72 bp	AGCCTTTGGCTTCCAAATTTGATCTTAAGTACTACCTaGGCCTGGGGTTTCTACCACTCAGTTAGTGCTTCC	+
Preference number: 3 (lower is better) Translates to: SLWLPNLILSTT*AWGFYHSVSAS Trigger: GGAAGCACTAACTGAGTGGTAGAAACCCCAGGCCCAGGTAGTACTTAAGATCAAATTTGGAAGCCAAAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
3UTR-3UTR CAA 90 bp	TGCAGTACTGAGCCTCACCAAGATGTCTCCCAACAGCTCATGTGTCTGGTGTTTCTTTGGCTTCCAAATTaGATCTTAAGTACTACCTGG	+
Preference number: 3 (lower is better) Translates to: CSTEPHQDVSQQLMCLVFLWLPN*ILSTTW Trigger: CCAGGTAGTACTTAAGATCAAATTTGGAAGCCAAAG...AAACACCAGACACATGAGCTGTTGGGAGACATCTTGGTGAGGCTCAGTACTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR TCA 72 bp	GGTTGTCCCTTTGTTAAGTCAGGAGAACTAGTCAGGTaGCACAATTTAAATTCAGGGAACCCAGTGGGACTG	+
Preference number: 3 (lower is better) Translates to: GCPFVKSGELVR*HNLNSGNPVGL Trigger: CAGTCCCACTGGGTTCCCTGAATTTAAATTGTGTCACCTGACTAGTTCTCCTGACTTAACAAAGGGACAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR TCA 72 bp	AAGTATTCAGAGGAAATGACCCCAGTCCTCCAACTCTaGAGAAGCTGCCCCATAACCTGTGATGCTTACAAA	+
Preference number: 3 (lower is better) Translates to: KYSEEMTPVLQL*RSCPITCDAYK Trigger: TTTGTAAGCATCACAGGTTATGGGGCAGCTTCTTCAGAGTTGGAGGACTGGGGTCATTTCCTCTGAATACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR GCA 72 bp	TTTGATCTCCAAGCACTGTGTGTAAGCTGTATGCAATaGCTGCTTAAGTCCAGGAGATGTACAACCAACAGT	+
Preference number: 3 (lower is better) Translates to: FDLQALCVSCMQ*LLKSRRCTTNS Trigger: ACTGTTGGTTGTACATCTCCTGGACTTAAGCAGGCATTGCATACAGCTTACACACAGTGCTTGGAGATCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR CAA 90 bp	CACAAACCAGTAAATGTGATTCCAGCTGCAAATTCCACTGGACCTTCCTGTGGACTTTGGCTTCCAAATTaGATCTTAAGTACTACCTGG	+
Preference number: 3 (lower is better) Translates to: HKPVNVIPAANSTGPSCGLWLPN*ILSTTW Trigger: CCAGGTAGTACTTAAGATCAAATTTGGAAGCCAAAG...TCCACAGGAAGGTCCAGTGGAATTTGCAGCTGGAATCACATTTACTGGTTTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR CAA 90 bp	AGAAGCTGCCCCATAACCTGTGATGCTTACAAACCTGGGATGAAATGTGAACAGGATGCTTTGAAGCCTTaGGCTTCCAAATTTGATCTT	+
Preference number: 3 (lower is better) Translates to: RSCPITCDAYKPGMKCEQDALKP*ASKFDL Trigger: AAGATCAAATTTGGAAGCCAAAGGCTTCAAAGCATC...CTGTTCACATTTCATCCCAGGTTTGTAAGCATCACAGGTTATGGGGCAGCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR CCA 72 bp	AGAATCCAGTATTTTATGCTGACCTACATGATTCCATaGAGAACCAGAGCTAAGGCTTTATGGGGTTGGGAA	+
Preference number: 3 (lower is better) Translates to: RIQYFMLTYMIP*RTRAKALWGWE Trigger: TTCCCAACCCCATAAAGCCTTAGCTCTGGTTCTCCATGGAATCATGTAGGTCAGCATAAAATACTGGATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
3UTR-3UTR CAA 90 bp	CACATGACCTTGAATTTAGGAAAGGTGGATTTCCAGCTGTCTGTGAAGCGTCTAGATGCTTTGAAGCCTTaGGCTTCCAAATTTGATCTT	+
Preference number: 3 (lower is better) Translates to: HMTLNLGKVDFQLSVKRLDALKP*ASKFDL Trigger: AAGATCAAATTTGGAAGCCAAAGGCTTCAAAGCATC...TAGACGCTTCACAGACAGCTGGAAATCCACCTTTCCTAAATTCAAGGTCATGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR-3UTR CAA 90 bp	CACAAACCAGTAAATGTGATTCCAGCTGCAAATTCCACTGGACCTTCCTGTGGAATATACCACATGACCTaGAATTTAGGAAAGGTGGAT	+
Preference number: 3 (lower is better) Translates to: HKPVNVIPAANSTGPSCGIYHMT*NLGKVD Trigger: ATCCACCTTTCCTAAATTCAAGGTCATGTGGTATAT...TCCACAGGAAGGTCCAGTGGAATTTGCAGCTGGAATCACATTTACTGGTTTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR TCA 72 bp	ATTGCAAGATTTAACCCTGGACTCCCAGGGATGCTTTaGAGCCTTTGGCTTCCAAATTTGATCTTAAGTACT	+
Preference number: 3 (lower is better) Translates to: IARFNPGLPGML*SLWLPNLILST Trigger: AGTACTTAAGATCAAATTTGGAAGCCAAAGGCTTCAAAGCATCCCTGGGAGTCCAGGGTTAAATCTTGCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
3UTR CCA 72 bp	TGTTTCAGAGTTGTGATCAGTCAAGTTGTCTTCTCCTaGTCACTTCAGAGTGACTTTGACCTTAGTTCTTTC	+
Preference number: 3 (lower is better) Translates to: CFRVVISQVVFS*SLQSDFDLSSF Trigger: GAAAGAACTAAGGTCAAAGTCACTCTGAAGTGACCAGGAGAAGACAACTTGACTGATCACAACTCTGAAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	AGCTCCATGCTGTTGCAGAGGGATGGAGCAAGACGGAGGTCCTGGCATCTCAGCGGACATGGCAGCCCCTaGGGTCCGTGTGGGGCAGCA	+
Preference number: 4 (lower is better) Translates to: SSMLLQRDGARRRSWHLSGHGSP*GPCGAA Trigger: TGCTGCCCCACACGGACCCCAGGGGCTGCCATGTCC...GCTGAGATGCCAGGACCTCCGTCTTGCTCCATCCCTCTGCAACAGCATGGAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR TCA 90 bp	CGTGCCTTAAATCTCTGCAGGCAGCTCCATGCTGTTGCAGAGGGATGGAGCAAGTGCAGCCGTGGTAGTTaGCCAGCAGCTGCAGGGCCC	+
Preference number: 4 (lower is better) Translates to: RALNLCRQLHAVAEGWSKCSRGS*PAAAGP Trigger: GGGCCCTGCAGCTGCTGGTCAACTACCACGGCTGCA...CTTGCTCCATCCCTCTGCAACAGCATGGAGCTGCCTGCAGAGATTTAAGGCACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR GCA 90 bp	AATCTCTGCAGGCAGCTCCATGCTGTTGCAGAGGGATGGAGCAAGACGGAGGTCGCCATCCTGGTCGGATaGAGAGGACATGGCAGCCCC	+
Preference number: 4 (lower is better) Translates to: NLCRQLHAVAEGWSKTEVAILVG*RGHGSP Trigger: GGGGCTGCCATGTCCTCTGCATCCGACCAGGATGGC...GACCTCCGTCTTGCTCCATCCCTCTGCAACAGCATGGAGCTGCCTGCAGAGATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109405.10
CDS-3UTR GCA 90 bp	AGCTCCATGCTGTTGCAGAGGGATGGAGCAAGACGGAGGTCCTGGCATCTCAGCCACTCGGGCTTCTCCTaGAGCTCTTCCCTGGCTTTG	+
Preference number: 4 (lower is better) Translates to: SSMLLQRDGARRRSWHLSHSGFS*SSSLAL Trigger: CAAAGCCAGGGAAGAGCTGCAGGAGAAGCCCGAGTG...GCTGAGATGCCAGGACCTCCGTCTTGCTCCATCCCTCTGCAACAGCATGGAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	CACTTTACCCCAAAGTCAGATACTCCCAGGTTCTTGCTCACTTGCTGGCTCCACGGACATGGCAGCCCCTaGGGTCCGTGTGGGGCAGCA	+
Preference number: 4 (lower is better) Translates to: HFTPKSDTPRFLLTCWLHGHGSP*GPCGAA Trigger: TGCTGCCCCACACGGACCCCAGGGGCTGCCATGTCC...GTGGAGCCAGCAAGTGAGCAAGAACCTGGGAGTATCTGACTTTGGGGTAAAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
CDS-3UTR TCA 90 bp	GGTAGCAGGGGCTGGCCCAGGAGGTTGTCGCAGGCAGGCATGGGCTGGCAGAACGGTTCGTTCACTATGTaGACTGCTTTTATCCGAATG	+
Preference number: 4 (lower is better) Translates to: GSRGWPRRLSQAGMGWQNGSFTM*TAFIRM Trigger: CATTCGGATAAAAGCAGTTCACATAGTGAACGAACC...GTTCTGCCAGCCCATGCCTGCCTGCGACAACCTCCTGGGCCAGCCCCTGCTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109405.10
CDS-3UTR CCA 90 bp	AATCTCTGCAGGCAGCTCCATGCTGTTGCAGAGGGATGGAGCAAGACGGAGGTCGTCCGGTGGAGGCAGTaGCAGCTCATTTTCGGAGAG	+
Preference number: 4 (lower is better) Translates to: NLCRQLHAVAEGWSKTEVVRWRQ*QLIFGE Trigger: CTCTCCGAAAATGAGCTGCCACTGCCTCCACCGGAC...GACCTCCGTCTTGCTCCATCCCTCTGCAACAGCATGGAGCTGCCTGCAGAGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	GGAGCAAGACGGAGGTCCTGGCATCTCAGCCTGTGCATTTCTAAGGAAGGAAGGCCCCTGGGGTCCGTGTaGGGCAGCACTGTAAGGAAT	+
Preference number: 4 (lower is better) Translates to: GARRRSWHLSLCISKEGRPLGSV*GSTVRN Trigger: ATTCCTTACAGTGCTGCCCCACACGGACCCCAGGGG...CCTTCCTTCCTTAGAAATGCACAGGCTGAGATGCCAGGACCTCCGTCTTGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR TCA 90 bp	CGTGCCTTAAATCTCTGCAGGCAGCTCCATGCTGTTGCAGAGGGATGGAGCAAGCTTCCCTGGCTTTGGTaGCCAAGTCTTCTGTCAGGG	+
Preference number: 4 (lower is better) Translates to: RALNLCRQLHAVAEGWSKLPWLW*PSLLSG Trigger: CCCTGACAGAAGACTTGGTCACCAAAGCCAGGGAAG...CTTGCTCCATCCCTCTGCAACAGCATGGAGCTGCCTGCAGAGATTTAAGGCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
3UTR CAA 72 bp	CAGCTGTGCCCCCATACTCCTTGGGGAGGATATTCCTaGGCAGGTTTGTGTGGAGAGAGTTCAGGTCAGACC	+
Preference number: 4 (lower is better) Translates to: QLCPHTPWGGYS*AGLCGESSGQT Trigger: GGTCTGACCTGAACTCTCTCCACACAAACCTGCCAAGGAATATCCTCCCCAAGGAGTATGGGGGCACAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109405.10
CDS-3UTR TCA 90 bp	ACAGACTGCAGTACTGAGCCTCACCAAGATGTCTCCCAACAGCTCATGTGTCTGCTCATTTTCGGAGAGTaGGGCCACAGAGGGGCTGGT	+
Preference number: 4 (lower is better) Translates to: TDCSTEPHQDVSQQLMCLLIFGE*GHRGAG Trigger: ACCAGCCCCTCTGTGGCCTCACTCTCCGAAAATGAG...CAGACACATGAGCTGTTGGGAGACATCTTGGTGAGGCTCAGTACTGCAGTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
CDS-3UTR TCA 90 bp	ACCCCAAAGTCAGATACTCCCAGGTTCTTGCTCACTTGCTGGCTCCACCAGTGTCTTCCCTGGCTTTGGTaGCCAAGTCTTCTGTCAGGG	+
Preference number: 4 (lower is better) Translates to: TPKSDTPRFLLTCWLHQCLPWLW*PSLLSG Trigger: CCCTGACAGAAGACTTGGTCACCAAAGCCAGGGAAG...ACACTGGTGGAGCCAGCAAGTGAGCAAGAACCTGGGAGTATCTGACTTTGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
CDS-3UTR TCA 90 bp	CCTTCTGAACCACCTAAGAAAGCTTCTAATAAGACTCTCCCATCAAGGCTGCAGTGCAGCCGTGGTAGTTaGCCAGCAGCTGCAGGGCCC	+
Preference number: 4 (lower is better) Translates to: PSEPPKKASNKTLPSRLQCSRGS*PAAAGP Trigger: GGGCCCTGCAGCTGCTGGTCAACTACCACGGCTGCA...CTGCAGCCTTGATGGGAGAGTCTTATTAGAAGCTTTCTTAGGTGGTTCAGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
CDS-3UTR TCA 90 bp	CCACAAAGACCCTCATTCCATGTAGCCTCACTGAGAGATGACAAGCTGAAGCCCCACAAAATCCTCCTCTaGGGCCAGCAGCACGGCGTT	+
Preference number: 4 (lower is better) Translates to: PQRPSFHVASLRDDKLKPHKILL*GQQHGV Trigger: AACGCCGTGCTGCTGGCCTCAGAGGAGGATTTTGTG...GGGCTTCAGCTTGTCATCTCTCAGTGAGGCTACATGGAATGAGGGTCTTTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	ACAGACTGCAGTACTGAGCCTCACCAAGATGTCTCCCAACAGCTCATGTGTCTGGTCCGGTGGAGGCAGTaGCAGCTCATTTTCGGAGAG	+
Preference number: 4 (lower is better) Translates to: TDCSTEPHQDVSQQLMCLVRWRQ*QLIFGE Trigger: CTCTCCGAAAATGAGCTGCCACTGCCTCCACCGGAC...CAGACACATGAGCTGTTGGGAGACATCTTGGTGAGGCTCAGTACTGCAGTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	CTTCCAAATTTGATCTTAAGTACTACCTGGGCCTGGGGTTTCTACCACTCAGTTGGACATGGCAGCCCCTaGGGTCCGTGTGGGGCAGCA	+
Preference number: 4 (lower is better) Translates to: LPNLILSTTWAWGFYHSVGHGSP*GPCGAA Trigger: TGCTGCCCCACACGGACCCCAGGGGCTGCCATGTCC...AACTGAGTGGTAGAAACCCCAGGCCCAGGTAGTACTTAAGATCAAATTTGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR TCA 90 bp	AGCTGCAAACTTAAGAGTACACCAGGGCAATTTCCATGTCTTCCCTGGAATAACTGCAGCCGTGGTAGTTaGCCAGCAGCTGCAGGGCCC	+
Preference number: 4 (lower is better) Translates to: SCKLKSTPGQFPCLPWNNCSRGS*PAAAGP Trigger: GGGCCCTGCAGCTGCTGGTCAACTACCACGGCTGCA...GTTATTCCAGGGAAGACATGGAAATTGCCCTGGTGTACTCTTAAGTTTGCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR GCA 90 bp	GTGAAGCGTCTAGCACTTTACCCCAAAGTCAGATACTCCCAGGTTCTTGCTCACATCTGTCTGGTCGGATaGAGAGGACATGGCAGCCCC	+
Preference number: 4 (lower is better) Translates to: VKRLALYPKVRYSQVLAHICLVG*RGHGSP Trigger: GGGGCTGCCATGTCCTCTGCATCCGACCAGACAGAT...GTGAGCAAGAACCTGGGAGTATCTGACTTTGGGGTAAAGTGCTAGACGCTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	AGCCATCCCTTTCAAGTTTACCCATTATTCTGCAAAGGCAGTTGGTCTCCACCAGTTGCTGAAGACCTCTaGCCAGCTCCGCCTGCAGCC	+
Preference number: 4 (lower is better) Translates to: SHPFQVYPLFCKGSWSPPVAEDL*PAPPAA Trigger: GGCTGCAGGCGGAGCTGGCCAGAGGTCTTCAGCAAC...TGGTGGAGACCAACTGCCTTTGCAGAATAATGGGTAAACTTGAAAGGGATGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	GCTTTGAAGCCTTTGGCTTCCAAATTTGATCTTAAGTACTACCTGGGCCTGGGGCCCCTGGGGTCCGTGTaGGGCAGCACTGTAAGGAAT	+
Preference number: 4 (lower is better) Translates to: ALKPLASKFDLKYYLGLGPLGSV*GSTVRN Trigger: ATTCCTTACAGTGCTGCCCCACACGGACCCCAGGGG...CCCCAGGCCCAGGTAGTACTTAAGATCAAATTTGGAAGCCAAAGGCTTCAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	GGAGCAAGACGGAGGTCCTGGCATCTCAGCCTGTGCATTTCTAAGGAAGGAAGGGGGGAGGATATTCCTTaGCAGGTTTGTGTGGAGAGA	+
Preference number: 4 (lower is better) Translates to: GARRRSWHLSLCISKEGRGEDIP*QVCVER Trigger: TCTCTCCACACAAACCTGCCAAGGAATATCCTCCCC...CCTTCCTTCCTTAGAAATGCACAGGCTGAGATGCCAGGACCTCCGTCTTGCTCC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	CGTGCCTTAAATCTCTGCAGGCAGCTCCATGCTGTTGCAGAGGGATGGAGCAAGCAGGCAGGCATGGGCTaGCAGAACTCTTTCACAAAA	+
Preference number: 4 (lower is better) Translates to: RALNLCRQLHAVAEGWSKQAGMG*QNSFTK Trigger: TTTTGTGAAAGAGTTCTGCCAGCCCATGCCTGCCTG...CTTGCTCCATCCCTCTGCAACAGCATGGAGCTGCCTGCAGAGATTTAAGGCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR TCA 90 bp	GCTTTGAAGCCTTTGGCTTCCAAATTTGATCTTAAGTACTACCTGGGCCTGGGGCACAAAATCCTCCTCTaGGGCCAGCAGCACGGCGTT	+
Preference number: 4 (lower is better) Translates to: ALKPLASKFDLKYYLGLGHKILL*GQQHGV Trigger: AACGCCGTGCTGCTGGCCTCAGAGGAGGATTTTGTG...CCCCAGGCCCAGGTAGTACTTAAGATCAAATTTGGAAGCCAAAGGCTTCAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR GCA 90 bp	AATCTCTGCAGGCAGCTCCATGCTGTTGCAGAGGGATGGAGCAAGACGGAGGTCAGCCATCCTGAAGGATaGCAATCACCTTTTTGGCTA	+
Preference number: 4 (lower is better) Translates to: NLCRQLHAVAEGWSKTEVSHPEG*QSPFWL Trigger: TAGCCAAAAAGGTGATTGGCATCCTTCAGGATGGCT...GACCTCCGTCTTGCTCCATCCCTCTGCAACAGCATGGAGCTGCCTGCAGAGATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	CCCAGGGATGCTTTGAAGCCTTTGGCTTCCAAATTTGATCTTAAGTACTACCTGGTTGCTGAAGACCTCTaGCCAGCTCCGCCTGCAGCC	+
Preference number: 4 (lower is better) Translates to: PRDALKPLASKFDLKYYLVAEDL*PAPPAA Trigger: GGCTGCAGGCGGAGCTGGCCAGAGGTCTTCAGCAAC...CAGGTAGTACTTAAGATCAAATTTGGAAGCCAAAGGCTTCAAAGCATCCCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	TGTTTCAGAGTTGTGATCAGTCAAGTTGTCTTCTCCTGGTCACTTCAGAGTGACGTTGCTGAAGACCTCTaGCCAGCTCCGCCTGCAGCC	+
Preference number: 4 (lower is better) Translates to: CFRVVISQVVFSWSLQSDVAEDL*PAPPAA Trigger: GGCTGCAGGCGGAGCTGGCCAGAGGTCTTCAGCAAC...GTCACTCTGAAGTGACCAGGAGAAGACAACTTGACTGATCACAACTCTGAAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	AATCTCTGCAGGCAGCTCCATGCTGTTGCAGAGGGATGGAGCAAGACGGAGGTCAATTGGGTAGTTGCTTaGTATCCATCTGTCTGGTCG	+
Preference number: 4 (lower is better) Translates to: NLCRQLHAVAEGWSKTEVNWVVA*YPSVWS Trigger: CGACCAGACAGATGGATACCAAGCAACTACCCAATT...GACCTCCGTCTTGCTCCATCCCTCTGCAACAGCATGGAGCTGCCTGCAGAGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	GGAGCAAGACGGAGGTCCTGGCATCTCAGCCTGTGCATTTCTAAGGAAGGAAGGTTCAGGTCAGACCCATaGAGGAAGAACCTGTTAGCA	+
Preference number: 4 (lower is better) Translates to: GARRRSWHLSLCISKEGRFRSDP*RKNLLA Trigger: TGCTAACAGGTTCTTCCTCCATGGGTCTGACCTGAA...CCTTCCTTCCTTAGAAATGCACAGGCTGAGATGCCAGGACCTCCGTCTTGCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	CCACAAAGACCCTCATTCCATGTAGCCTCACTGAGAGATGACAAGCTGAAGCCCTGCCCCCATACTCCTTaGGGAGGATATTCCTTGGCA	+
Preference number: 4 (lower is better) Translates to: PQRPSFHVASLRDDKLKPCPHTP*GGYSLA Trigger: TGCCAAGGAATATCCTCCCCAAGGAGTATGGGGGCA...GGGCTTCAGCTTGTCATCTCTCAGTGAGGCTACATGGAATGAGGGTCTTTGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	TACCCAAACACAGAGCTGACATTCAGTCCAAGTGGTCCTCCCATACGAGACTCCTGCCCCCATACTCCTTaGGGAGGATATTCCTTGGCA	+
Preference number: 4 (lower is better) Translates to: YPNTELTFSPSGPPIRDSCPHTP*GGYSLA Trigger: TGCCAAGGAATATCCTCCCCAAGGAGTATGGGGGCA...GGAGTCTCGTATGGGAGGACCACTTGGACTGAATGTCAGCTCTGTGTTTGGGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	ATAGCGTCCTTACGGCCAGAGTCTGGTCAGGAACAGGATTCAGAGTTTAGCATACGACGTGCTCAGGTATaGGTACTCCTTCCGCACCAT	+
Preference number: 4 (lower is better) Translates to: IASLRPESGQEQDSEFSIRRAQV*VLLPHH Trigger: ATGGTGCGGAAGGAGTACCCATACCTGAGCACGTCG...TATGCTAAACTCTGAATCCTGTTCCTGACCAGACTCTGGCCGTAAGGACGCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	GCTTTGAAGCCTTTGGCTTCCAAATTTGATCTTAAGTACTACCTGGGCCTGGGGCGACGTGCTCAGGTATaGGTACTCCTTCCGCACCAT	+
Preference number: 4 (lower is better) Translates to: ALKPLASKFDLKYYLGLGRRAQV*VLLPHH Trigger: ATGGTGCGGAAGGAGTACCCATACCTGAGCACGTCG...CCCCAGGCCCAGGTAGTACTTAAGATCAAATTTGGAAGCCAAAGGCTTCAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	CTCCAAGCACTGTGTGTAAGCTGTATGCAATGCCTGCTTAAGTCCAGGAGATGTTGTCGCAGGCAGGCATaGGCTGGCAGAACTCTTTCA	+
Preference number: 4 (lower is better) Translates to: LQALCVSCMQCLLKSRRCCRRQA*AGRTLS Trigger: TGAAAGAGTTCTGCCAGCCCATGCCTGCCTGCGACA...ACATCTCCTGGACTTAAGCAGGCATTGCATACAGCTTACACACAGTGCTTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171696.8
CDS-3UTR TCA 90 bp	GTCTTCTCCTGGTCACTTCAGAGTGACTTTGACCTTAGTTCTTTCCAAGATGCACTCATTTTCGGAGAGTaGGGCCACAGAGGGGCTGGT	+
Preference number: 4 (lower is better) Translates to: VFSWSLQSDFDLSSFQDALIFGE*GHRGAG Trigger: ACCAGCCCCTCTGTGGCCTCACTCTCCGAAAATGAG...TGCATCTTGGAAAGAACTAAGGTCAAAGTCACTCTGAAGTGACCAGGAGAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR TCA 90 bp	CCCAGGGATGCTTTGAAGCCTTTGGCTTCCAAATTTGATCTTAAGTACTACCTGCTCATTTTCGGAGAGTaGGGCCACAGAGGGGCTGGT	+
Preference number: 4 (lower is better) Translates to: PRDALKPLASKFDLKYYLLIFGE*GHRGAG Trigger: ACCAGCCCCTCTGTGGCCTCACTCTCCGAAAATGAG...CAGGTAGTACTTAAGATCAAATTTGGAAGCCAAAGGCTTCAAAGCATCCCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR GCA 90 bp	CTTCCAAATTTGATCTTAAGTACTACCTGGGCCTGGGGTTTCTACCACTCAGTTCACTCGGGCTTCTCCTaGAGCTCTTCCCTGGCTTTG	+
Preference number: 4 (lower is better) Translates to: LPNLILSTTWAWGFYHSVHSGFS*SSSLAL Trigger: CAAAGCCAGGGAAGAGCTGCAGGAGAAGCCCGAGTG...AACTGAGTGGTAGAAACCCCAGGCCCAGGTAGTACTTAAGATCAAATTTGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR GCA 90 bp	GGTGATTGTTTCAGAGTTGTGATCAGTCAAGTTGTCTTCTCCTGGTCACTTCAGATCTGTCTGGTCGGATaGAGAGGACATGGCAGCCCC	+
Preference number: 4 (lower is better) Translates to: GDCFRVVISQVVFSWSLQICLVG*RGHGSP Trigger: GGGGCTGCCATGTCCTCTGCATCCGACCAGACAGAT...CTGAAGTGACCAGGAGAAGACAACTTGACTGATCACAACTCTGAAACAATCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	TGTGAAGCGTCTAGCACTTTACCCCAAAGTCAGATACTCCCAGGTTCTTGCTCAAGGCCACAGAGGGGCTaGTTCTCAGAGAGTCACTTT	+
Preference number: 4 (lower is better) Translates to: CEASSTLPQSQILPGSCSRPQRG*FSESHF Trigger: AAAGTGACTCTCTGAGAACCAGCCCCTCTGTGGCCT...TGAGCAAGAACCTGGGAGTATCTGACTTTGGGGTAAAGTGCTAGACGCTTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	CCTTCTGAACCACCTAAGAAAGCTTCTAATAAGACTCTCCCATCAAGGCTGCAGCGACGTGCTCAGGTATaGGTACTCCTTCCGCACCAT	+
Preference number: 4 (lower is better) Translates to: PSEPPKKASNKTLPSRLQRRAQV*VLLPHH Trigger: ATGGTGCGGAAGGAGTACCCATACCTGAGCACGTCG...CTGCAGCCTTGATGGGAGAGTCTTATTAGAAGCTTTCTTAGGTGGTTCAGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
CDS-3UTR TCA 90 bp	GGAGCAAGACGGAGGTCCTGGCATCTCAGCCTGTGCATTTCTAAGGAAGGAAGGTCTCCTCGGACTGAATaGGTTTTTCTAATGTCAAGT	+
Preference number: 4 (lower is better) Translates to: GARRRSWHLSLCISKEGRSPRTE*VFLMSS Trigger: ACTTGACATTAGAAAAACTCATTCAGTCCGAGGAGA...CCTTCCTTCCTTAGAAATGCACAGGCTGAGATGCCAGGACCTCCGTCTTGCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR TCA 90 bp	TACCCAAACACAGAGCTGACATTCAGTCCAAGTGGTCCTCCCATACGAGACTCCTGGGTCTCCTCGGACTaGATGAGTTTTTCTAATGTC	+
Preference number: 4 (lower is better) Translates to: YPNTELTFSPSGPPIRDSWVSSD*MSFSNV Trigger: GACATTAGAAAAACTCATTCAGTCCGAGGAGACCCA...GGAGTCTCGTATGGGAGGACCACTTGGACTGAATGTCAGCTCTGTGTTTGGGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171696.8
CDS-3UTR GCA 90 bp	AAGCCAGGAGATAAATCACCTCACTCAGTGCTTGAGTTAAGGCTAAAACCTTGTCACTCGGGCTTCTCCTaGAGCTCTTCCCTGGCTTTG	+
Preference number: 4 (lower is better) Translates to: KPGDKSPHSVLELRLKPCHSGFS*SSSLAL Trigger: CAAAGCCAGGGAAGAGCTGCAGGAGAAGCCCGAGTG...ACAAGGTTTTAGCCTTAACTCAAGCACTGAGTGAGGTGATTTATCTCCTGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
3UTR CAA 72 bp	CCCAGTTCCCACCCATCAGAGAGGGTATCTGAGGTCTaGGCCACTGAGAAGTTTCAAGTATTTTACCTGTTG	+
Preference number: 4 (lower is better) Translates to: PSSHPSERVSEV*ATEKFQVFYLL Trigger: CAACAGGTAAAATACTTGAAACTTCTCAGTGGCCAAGACCTCAGATACCCTCTCTGATGGGTGGGAACTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
CDS-3UTR TCA 90 bp	ACCTACATGATTCCATGGAGAACCAGAGCTAAGGCTTTATGGGGTTGGGAAAAGATGGGGAAGCCATCCTaGAGGATGCCAATCACCTTT	+
Preference number: 4 (lower is better) Translates to: TYMIPWRTRAKALWGWEKMGKPS*RMPITF Trigger: AAAGGTGATTGGCATCCTTCAGGATGGCTTCCCCAT...CTTTTCCCAACCCCATAAAGCCTTAGCTCTGGTTCTCCATGGAATCATGTAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR GCA 90 bp	TGTTTCAGAGTTGTGATCAGTCAAGTTGTCTTCTCCTGGTCACTTCAGAGTGACATGGAGTCATCACACTaGGCATCTGAGATCAGCCCC	+
Preference number: 4 (lower is better) Translates to: CFRVVISQVVFSWSLQSDMESSH*ASEISP Trigger: GGGGCTGATCTCAGATGCGCAGTGTGATGACTCCAT...GTCACTCTGAAGTGACCAGGAGAAGACAACTTGACTGATCACAACTCTGAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	CTTCCAAATTTGATCTTAAGTACTACCTGGGCCTGGGGTTTCTACCACTCAGTTAGGCCACAGAGGGGCTaGTTCTCAGAGAGTCACTTT	+
Preference number: 4 (lower is better) Translates to: LPNLILSTTWAWGFYHSVRPQRG*FSESHF Trigger: AAAGTGACTCTCTGAGAACCAGCCCCTCTGTGGCCT...AACTGAGTGGTAGAAACCCCAGGCCCAGGTAGTACTTAAGATCAAATTTGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	CCCAGGGATGCTTTGAAGCCTTTGGCTTCCAAATTTGATCTTAAGTACTACCTGCTGCTTTTATCCGAATaGGGAAGCCATCCTGGTCGG	+
Preference number: 4 (lower is better) Translates to: PRDALKPLASKFDLKYYLLLLSE*GSHPGR Trigger: CCGACCAGGATGGCTTCCCCATTCGGATAAAAGCAG...CAGGTAGTACTTAAGATCAAATTTGGAAGCCAAAGGCTTCAAAGCATCCCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109405.10
CDS-3UTR CCA 90 bp	AACAAAAAGATCCAACCACCTCTAGGTAATGTCTTCCCAAGCAGAAGCCTAACATGTCGCAGGCAGGCATaGGCTGGCAGAACTCTTTCA	+
Preference number: 4 (lower is better) Translates to: NKKIQPPLGNVFPSRSLTCRRQA*AGRTLS Trigger: TGAAAGAGTTCTGCCAGCCCATGCCTGCCTGCGACA...TGTTAGGCTTCTGCTTGGGAAGACATTACCTAGAGGTGGTTGGATCTTTTTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR TCA 90 bp	CCCAGGGATGCTTTGAAGCCTTTGGCTTCCAAATTTGATCTTAAGTACTACCTGATGGGGAAGCCATCCTaGAGGATGCCAATCACCTTT	+
Preference number: 4 (lower is better) Translates to: PRDALKPLASKFDLKYYLMGKPS*RMPITF Trigger: AAAGGTGATTGGCATCCTTCAGGATGGCTTCCCCAT...CAGGTAGTACTTAAGATCAAATTTGGAAGCCAAAGGCTTCAAAGCATCCCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	ATGATTCCATGGAGAACCAGAGCTAAGGCTTTATGGGGTTGGGAAAAGTTTCTAAGGCCACAGAGGGGCTaGTTCTCAGAGAGTCACTTT	+
Preference number: 4 (lower is better) Translates to: MIPWRTRAKALWGWEKFLRPQRG*FSESHF Trigger: AAAGTGACTCTCTGAGAACCAGCCCCTCTGTGGCCT...TAGAAACTTTTCCCAACCCCATAAAGCCTTAGCTCTGGTTCTCCATGGAATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	AGAAGCTGCCCCATAACCTGTGATGCTTACAAACCTGGGATGAAATGTGAACAGTTCAGGTCAGACCCATaGAGGAAGAACCTGTTAGCA	+
Preference number: 4 (lower is better) Translates to: RSCPITCDAYKPGMKCEQFRSDP*RKNLLA Trigger: TGCTAACAGGTTCTTCCTCCATGGGTCTGACCTGAA...CTGTTCACATTTCATCCCAGGTTTGTAAGCATCACAGGTTATGGGGCAGCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	TGTTTCAGAGTTGTGATCAGTCAAGTTGTCTTCTCCTGGTCACTTCAGAGTGACCAGGCAGGCATGGGCTaGCAGAACTCTTTCACAAAA	+
Preference number: 4 (lower is better) Translates to: CFRVVISQVVFSWSLQSDQAGMG*QNSFTK Trigger: TTTTGTGAAAGAGTTCTGCCAGCCCATGCCTGCCTG...GTCACTCTGAAGTGACCAGGAGAAGACAACTTGACTGATCACAACTCTGAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR TCA 90 bp	CTGCTCAACATAAGAGTTGCTTTATTTTGCACCAGGAGGTCCTGGTCTCACAGCGGTTCGTTCACTATGTaGACTGCTTTTATCCGAATG	+
Preference number: 4 (lower is better) Translates to: LLNIRVALFCTRRSWSHSGSFTM*TAFIRM Trigger: CATTCGGATAAAAGCAGTTCACATAGTGAACGAACC...GCTGTGAGACCAGGACCTCCTGGTGCAAAATAAAGCAACTCTTATGTTGAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	GGTGATTGTTTCAGAGTTGTGATCAGTCAAGTTGTCTTCTCCTGGTCACTTCAGCTGCTTTTATCCGAATaGGGAAGCCATCCTGAAGGA	+
Preference number: 4 (lower is better) Translates to: GDCFRVVISQVVFSWSLQLLLSE*GSHPEG Trigger: TCCTTCAGGATGGCTTCCCCATTCGGATAAAAGCAG...CTGAAGTGACCAGGAGAAGACAACTTGACTGATCACAACTCTGAAACAATCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	AACAAAAAGATCCAACCACCTCTAGGTAATGTCTTCCCAAGCAGAAGCCTAACAGGGGAGGATATTCCTTaGCAGGTTTGTGTGGAGAGA	+
Preference number: 4 (lower is better) Translates to: NKKIQPPLGNVFPSRSLTGEDIP*QVCVER Trigger: TCTCTCCACACAAACCTGCCAAGGAATATCCTCCCC...TGTTAGGCTTCTGCTTGGGAAGACATTACCTAGAGGTGGTTGGATCTTTTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109408.10 ENSMUST00000171696.8
3UTR CAA 72 bp	AGCAAATGGTCTCAATGGGCAGTCAAGAGGGGTATATaGGCCCTAAAGCTTAGCCAGGACCTAAAAGATCAA	+
Preference number: 4 (lower is better) Translates to: SKWSQWAVKRGI*ALKLSQDLKDQ Trigger: TTGATCTTTTAGGTCCTGGCTAAGCTTTAGGGCCAATATACCCCTCTTGACTGCCCATTGAGACCATTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
CDS-3UTR TCA 90 bp	CTTCCAAATTTGATCTTAAGTACTACCTGGGCCTGGGGTTTCTACCACTCAGTTTGGGTCTCCTCGGACTaGATGAGTTTTTCTAATGTC	+
Preference number: 4 (lower is better) Translates to: LPNLILSTTWAWGFYHSVWVSSD*MSFSNV Trigger: GACATTAGAAAAACTCATTCAGTCCGAGGAGACCCA...AACTGAGTGGTAGAAACCCCAGGCCCAGGTAGTACTTAAGATCAAATTTGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR GCA 90 bp	CTTCCAAATTTGATCTTAAGTACTACCTGGGCCTGGGGTTTCTACCACTCAGTTAGCCATCCTGAAGGATaGCAATCACCTTTTTGGCTA	+
Preference number: 4 (lower is better) Translates to: LPNLILSTTWAWGFYHSVSHPEG*QSPFWL Trigger: TAGCCAAAAAGGTGATTGGCATCCTTCAGGATGGCT...AACTGAGTGGTAGAAACCCCAGGCCCAGGTAGTACTTAAGATCAAATTTGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	AACAAAAAGATCCAACCACCTCTAGGTAATGTCTTCCCAAGCAGAAGCCTAACACTGCTTTTATCCGAATaGGGAAGCCATCCTGAAGGA	+
Preference number: 4 (lower is better) Translates to: NKKIQPPLGNVFPSRSLTLLLSE*GSHPEG Trigger: TCCTTCAGGATGGCTTCCCCATTCGGATAAAAGCAG...TGTTAGGCTTCTGCTTGGGAAGACATTACCTAGAGGTGGTTGGATCTTTTTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109408.10 ENSMUST00000171696.8
3UTR CAA 72 bp	TCCCTTTCAAGTTTACCCATTATTCTGCAAAGGCAGTaGGTCTCCACCAACTCCCAGGAACATACTAGTTTC	+
Preference number: 4 (lower is better) Translates to: SLSSLPIILQRQ*VSTNSQEHTSF Trigger: GAAACTAGTATGTTCCTGGGAGTTGGTGGAGACCAACTGCCTTTGCAGAATAATGGGTAAACTTGAAAGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
CDS-3UTR GCA 90 bp	CCTTTGGCTTCCAAATTTGATCTTAAGTACTACCTGGGCCTGGGGTTTCTACCAGTTCACTATGTGAACTaGTTTTATCCGAATGGGGAA	+
Preference number: 4 (lower is better) Translates to: PLASKFDLKYYLGLGFLPVHYVN*FYPNGE Trigger: TTCCCCATTCGGATAAAAGCAGTTCACATAGTGAAC...TGGTAGAAACCCCAGGCCCAGGTAGTACTTAAGATCAAATTTGGAAGCCAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR GCA 90 bp	CTAAAGCTTAGCCAGGACCTAAAAGATCAACGATTAGCATCTAAAGTGAAAAGAATGGAGTCATCACACTaGGCATCTGAGATCAGCCCC	+
Preference number: 4 (lower is better) Translates to: LKLSQDLKDQRLASKVKRMESSH*ASEISP Trigger: GGGGCTGATCTCAGATGCGCAGTGTGATGACTCCAT...TCTTTTCACTTTAGATGCTAATCGTTGATCTTTTAGGTCCTGGCTAAGCTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	AGCTGCAAACTTAAGAGTACACCAGGGCAATTTCCATGTCTTCCCTGGAATAACGATGTTCTCGGTAATTaGGTAGTTGCTTGGTATCCA	+
Preference number: 4 (lower is better) Translates to: SCKLKSTPGQFPCLPWNNDVLGN*VVAWYP Trigger: TGGATACCAAGCAACTACCCAATTACCGAGAACATC...GTTATTCCAGGGAAGACATGGAAATTGCCCTGGTGTACTCTTAAGTTTGCAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR TCA 90 bp	GATTGTTTCAGAGTTGTGATCAGTCAAGTTGTCTTCTCCTGGTCACTTCAGAGTGGTTCGTTCACTATGTaGACTGCTTTTATCCGAATG	+
Preference number: 4 (lower is better) Translates to: DCFRVVISQVVFSWSLQSGSFTM*TAFIRM Trigger: CATTCGGATAAAAGCAGTTCACATAGTGAACGAACC...ACTCTGAAGTGACCAGGAGAAGACAACTTGACTGATCACAACTCTGAAACAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR TCA 90 bp	CCCAGGGATGCTTTGAAGCCTTTGGCTTCCAAATTTGATCTTAAGTACTACCTGTCTCCTCGGACTGAATaGGTTTTTCTAATGTCAAGT	+
Preference number: 4 (lower is better) Translates to: PRDALKPLASKFDLKYYLSPRTE*VFLMSS Trigger: ACTTGACATTAGAAAAACTCATTCAGTCCGAGGAGA...CAGGTAGTACTTAAGATCAAATTTGGAAGCCAAAGGCTTCAAAGCATCCCTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	ATGATTCCATGGAGAACCAGAGCTAAGGCTTTATGGGGTTGGGAAAAGTTTCTAGATGTTCTCGGTAATTaGGTAGTTGCTTGGTATCCA	+
Preference number: 4 (lower is better) Translates to: MIPWRTRAKALWGWEKFLDVLGN*VVAWYP Trigger: TGGATACCAAGCAACTACCCAATTACCGAGAACATC...TAGAAACTTTTCCCAACCCCATAAAGCCTTAGCTCTGGTTCTCCATGGAATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109408.10 ENSMUST00000171696.8
3UTR CAA 72 bp	GTCAAGTTGTCTTCTCCTGGTCACTTCAGAGTGACTTaGACCTTAGTTCTTTCCAAGATGCATAAGAAACAG	+
Preference number: 4 (lower is better) Translates to: VKLSSPGHFRVT*TLVLSKMHKKQ Trigger: CTGTTTCTTATGCATCTTGGAAAGAACTAAGGTCAAAGTCACTCTGAAGTGACCAGGAGAAGACAACTTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
3UTR CAA 72 bp	GTTCTATCCCTTTCTCTTCCAATATACCACATGACCTaGAATTTAGGAAAGGTGGATTTCCAGCTGTCTGTG	+
Preference number: 4 (lower is better) Translates to: VLSLSLPIYHMT*NLGKVDFQLSV Trigger: CACAGACAGCTGGAAATCCACCTTTCCTAAATTCAAGGTCATGTGGTATATTGGAAGAGAAAGGGATAGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
CDS-3UTR CCA 90 bp	GTTAATGTTCTATCCCTTTCTCTTCCAATATACCACATGACCTTGAATTTAGGAAATTGGGTAGTTGCTTaGTATCCATCTGTCTGGTCG	+
Preference number: 4 (lower is better) Translates to: VNVLSLSLPIYHMTLNLGNWVVA*YPSVWS Trigger: CGACCAGACAGATGGATACCAAGCAACTACCCAATT...TCCTAAATTCAAGGTCATGTGGTATATTGGAAGAGAAAGGGATAGAACATTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171696.8
CDS GCA 90 bp	TCTCGGAGGGCCTGCACATCCCGCAGCCTCCACTCGGGCTTCTCCTaGAGCTCTTCCCTGGCTTTGGTGACCAAGTCTTCTGTCAGGGAG	+
Preference number: 5 (lower is better) Translates to: SRRACTSRSLHSGFS*SSSLALVTKSSVRE Trigger: CTCCCTGACAGAAGACTTGGTCACCAAAGCCAGGGAAGAGCTGCAGGAGAAGCCCGAGTGGAGGCTGCGGGATGTGCAGGCCCTCCGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000156839.2 ENSMUST00000171696.8
CDS GCA 90 bp	TTCGGGCCCTCAGAAAGCGCAACAGGAAGGCATCGTCCAGCGACGTaGTCAGGTATGGGTACTCCTTCCGCACCATGTCTCGGAGGGCCT	+
Preference number: 5 (lower is better) Translates to: FGPSESATGRHRPAT*SGMGTPSAPCLGGP Trigger: AGGCCCTCCGAGACATGGTGCGGAAGGAGTACCCATACCTGAGCACGTCGCTGGACGATGCCTTCCTGTTGCGCTTTCTGAGGGCCCGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000156839.2 ENSMUST00000171696.8
CDS CCA 90 bp	CAGAAAGCGCAACAGGAAGGCATCGTCCAGCGACGTGCTCAGGTATaGGTACTCCTTCCGCACCATGTCTCGGAGGGCCTGCACATCCCG	+
Preference number: 5 (lower is better) Translates to: QKAQQEGIVQRRAQV*VLLPHHVSEGLHIP Trigger: CGGGATGTGCAGGCCCTCCGAGACATGGTGCGGAAGGAGTACCCATACCTGAGCACGTCGCTGGACGATGCCTTCCTGTTGCGCTTTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000156839.2 ENSMUST00000171696.8
CDS TCA 90 bp	GGGCAGCACTGTAAGGAATCCAGAGTTGAGAACGTCTTTCAGGGCTaGCGGCCTCAGGTTGCTGAAGACCTCTGGCCAGCTCCGCCTGCA	+
Preference number: 5 (lower is better) Translates to: GQHCKESRVENVFQG*RPQVAEDLWPAPPA Trigger: TGCAGGCGGAGCTGGCCAGAGGTCTTCAGCAACCTGAGGCCGTCAGCCCTGAAAGACGTTCTCAACTCTGGATTCCTTACAGTGCTGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000156839.2 ENSMUST00000171696.8
CDS CCA 90 bp	CATCCTGGTCGGATGCAGAGGACATGGCAGCCCCTGGGGTCCGTGTaGGGCAGCACTGTAAGGAATCCAGAGTTGAGAACGTCTTTCAGG	+
Preference number: 5 (lower is better) Translates to: HPGRMQRTWQPLGSV*GSTVRNPELRTSFR Trigger: CCTGAAAGACGTTCTCAACTCTGGATTCCTTACAGTGCTGCCCCACACGGACCCCAGGGGCTGCCATGTCCTCTGCATCCGACCAGGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109405.10
CDS CCA 90 bp	CTGTCTGGTCGGATGCAGAGGACATGGCAGCCCCTGGGGTCCGTGTaGGGCAGCACTGTAAGGAATCCAGAGTTGAGAACGTCTTTCAGG	+
Preference number: 5 (lower is better) Translates to: LSGRMQRTWQPLGSV*GSTVRNPELRTSFR Trigger: CCTGAAAGACGTTCTCAACTCTGGATTCCTTACAGTGCTGCCCCACACGGACCCCAGGGGCTGCCATGTCCTCTGCATCCGACCAGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109408.10 ENSMUST00000156839.2 ENSMUST00000171696.8
CDS-3UTR CAA 90 bp	CCCAGGGATGCTTTGAAGCCTTTGGCTTCCAAATTTGATCTTAAGTACTACCTGGGCTGGCCCAGGAGGTaGTCGCAGGCAGGCATGGGC	+
Preference number: 5 (lower is better) Translates to: PRDALKPLASKFDLKYYLGWPRR*SQAGMG Trigger: GCCCATGCCTGCCTGCGACAACCTCCTGGGCCAGCC...CAGGTAGTACTTAAGATCAAATTTGGAAGCCAAAGGCTTCAAAGCATCCCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR CAA 90 bp	GCTTTGAAGCCTTTGGCTTCCAAATTTGATCTTAAGTACTACCTGGGCCTGGGGGCTGACGGCCTCAGGTaGCTGAAGACCTCTGGCCAG	+
Preference number: 5 (lower is better) Translates to: ALKPLASKFDLKYYLGLGADGLR*LKTSGQ Trigger: CTGGCCAGAGGTCTTCAGCAACCTGAGGCCGTCAGC...CCCCAGGCCCAGGTAGTACTTAAGATCAAATTTGGAAGCCAAAGGCTTCAAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR CAA 90 bp	AATGTGAACAGTACAAATCCACCTGTGCCTGAAGCCAGCACTTTTACTGTTTCTGGCTGGCCCAGGAGGTaGTCGCAGGCAGGCATGGGC	+
Preference number: 5 (lower is better) Translates to: NVNSTNPPVPEASTFTVSGWPRR*SQAGMG Trigger: GCCCATGCCTGCCTGCGACAACCTCCTGGGCCAGCC...AGAAACAGTAAAAGTGCTGGCTTCAGGCACAGGTGGATTTGTACTGTTCACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171696.8
CDS-3UTR CAA 90 bp	CCACAAAGACCCTCATTCCATGTAGCCTCACTGAGAGATGACAAGCTGAAGCCCTGGGGAGGATATTCCTaGGCAGGTTTGTGTGGAGAG	+
Preference number: 5 (lower is better) Translates to: PQRPSFHVASLRDDKLKPWGGYS*AGLCGE Trigger: CTCTCCACACAAACCTGCCAAGGAATATCCTCCCCA...GGGCTTCAGCTTGTCATCTCTCAGTGAGGCTACATGGAATGAGGGTCTTTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR CAA 90 bp	GATTGTTTCAGAGTTGTGATCAGTCAAGTTGTCTTCTCCTGGTCACTTCAGAGTGCTGACGGCCTCAGGTaGCTGAAGACCTCTGGCCAG	+
Preference number: 5 (lower is better) Translates to: DCFRVVISQVVFSWSLQSADGLR*LKTSGQ Trigger: CTGGCCAGAGGTCTTCAGCAACCTGAGGCCGTCAGC...ACTCTGAAGTGACCAGGAGAAGACAACTTGACTGATCACAACTCTGAAACAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR CAA 90 bp	CCACTGAGAAGTTTCAAGTATTTTACCTGTTGGGCCCTTTGTAATGTGCCAAGAGCTGACGGCCTCAGGTaGCTGAAGACCTCTGGCCAG	+
Preference number: 5 (lower is better) Translates to: PLRSFKYFTCWALCNVPRADGLR*LKTSGQ Trigger: CTGGCCAGAGGTCTTCAGCAACCTGAGGCCGTCAGC...TCTTGGCACATTACAAAGGGCCCAACAGGTAAAATACTTGAAACTTCTCAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109405.10 ENSMUST00000171696.8
CDS-3UTR CAA 90 bp	GGTGATTGTTTCAGAGTTGTGATCAGTCAAGTTGTCTTCTCCTGGTCACTTCAGGTGCCCCCATACTCCTaGGGGAGGATATTCCTTGGC	+
Preference number: 5 (lower is better) Translates to: GDCFRVVISQVVFSWSLQVPPYS*GRIFLG Trigger: GCCAAGGAATATCCTCCCCAAGGAGTATGGGGGCAC...CTGAAGTGACCAGGAGAAGACAACTTGACTGATCACAACTCTGAAACAATCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR CAA 90 bp	AACAAAAAGATCCAACCACCTCTAGGTAATGTCTTCCCAAGCAGAAGCCTAACAGTGCCCCCATACTCCTaGGGGAGGATATTCCTTGGC	+
Preference number: 5 (lower is better) Translates to: NKKIQPPLGNVFPSRSLTVPPYS*GRIFLG Trigger: GCCAAGGAATATCCTCCCCAAGGAGTATGGGGGCAC...TGTTAGGCTTCTGCTTGGGAAGACATTACCTAGAGGTGGTTGGATCTTTTTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR CAA 90 bp	CACATGACCTTGAATTTAGGAAAGGTGGATTTCCAGCTGTCTGTGAAGCGTCTATGGGGAGGATATTCCTaGGCAGGTTTGTGTGGAGAG	+
Preference number: 5 (lower is better) Translates to: HMTLNLGKVDFQLSVKRLWGGYS*AGLCGE Trigger: CTCTCCACACAAACCTGCCAAGGAATATCCTCCCCA...TAGACGCTTCACAGACAGCTGGAAATCCACCTTTCCTAAATTCAAGGTCATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171696.8
CDS-3UTR CAA 90 bp	CTTCCAAATTTGATCTTAAGTACTACCTGGGCCTGGGGTTTCTACCACTCAGTTGTAAGGAATCCAGAGTaGAGAACGTCTTTCAGGGCT	+
Preference number: 5 (lower is better) Translates to: LPNLILSTTWAWGFYHSVVRNPE*RTSFRA Trigger: AGCCCTGAAAGACGTTCTCAACTCTGGATTCCTTAC...AACTGAGTGGTAGAAACCCCAGGCCCAGGTAGTACTTAAGATCAAATTTGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR CAA 90 bp	AGCTGCAAACTTAAGAGTACACCAGGGCAATTTCCATGTCTTCCCTGGAATAACGTAAGGAATCCAGAGTaGAGAACGTCTTTCAGGGCT	+
Preference number: 5 (lower is better) Translates to: SCKLKSTPGQFPCLPWNNVRNPE*RTSFRA Trigger: AGCCCTGAAAGACGTTCTCAACTCTGGATTCCTTAC...GTTATTCCAGGGAAGACATGGAAATTGCCCTGGTGTACTCTTAAGTTTGCAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR CAA 90 bp	TGTGAAGCGTCTAGCACTTTACCCCAAAGTCAGATACTCCCAGGTTCTTGCTCACAAAATGAGATGCTTTaGATAAGCTCACTCCCTTGT	+
Preference number: 5 (lower is better) Translates to: CEASSTLPQSQILPGSCSQNEML*ISSLPC Trigger: ACAAGGGAGTGAGCTTATCAAAAGCATCTCATTTTG...TGAGCAAGAACCTGGGAGTATCTGACTTTGGGGTAAAGTGCTAGACGCTTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171696.8
CDS-3UTR CAA 90 bp	AGCCATCCCTTTCAAGTTTACCCATTATTCTGCAAAGGCAGTTGGTCTCCACCAATGCCAATCACCTTTTaGGCTATAAAAGGCCCAAAA	+
Preference number: 5 (lower is better) Translates to: SHPFQVYPLFCKGSWSPPMPITF*AIKGPK Trigger: TTTTGGGCCTTTTATAGCCAAAAAGGTGATTGGCAT...TGGTGGAGACCAACTGCCTTTGCAGAATAATGGGTAAACTTGAAAGGGATGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171696.8
CDS-3UTR CAA 90 bp	CCCAGGGATGCTTTGAAGCCTTTGGCTTCCAAATTTGATCTTAAGTACTACCTGCAAAATGAGATGCTTTaGATAAGCTCACTCCCTTGT	+
Preference number: 5 (lower is better) Translates to: PRDALKPLASKFDLKYYLQNEML*ISSLPC Trigger: ACAAGGGAGTGAGCTTATCAAAAGCATCTCATTTTG...CAGGTAGTACTTAAGATCAAATTTGGAAGCCAAAGGCTTCAAAGCATCCCTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109408.10 ENSMUST00000171696.8
CDS-3UTR CAA 90 bp	ATGATTCCATGGAGAACCAGAGCTAAGGCTTTATGGGGTTGGGAAAAGTTTCTAATGCCAATCACCTTTTaGGCTATAAAAGGCCCAAAA	+
Preference number: 5 (lower is better) Translates to: MIPWRTRAKALWGWEKFLMPITF*AIKGPK Trigger: TTTTGGGCCTTTTATAGCCAAAAAGGTGATTGGCAT...TAGAAACTTTTCCCAACCCCATAAAGCCTTAGCTCTGGTTCTCCATGGAATCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000109408.10 ENSMUST00000171696.8
CDS GCA 72 bp	TATGGGTACTCCTTCCGCACCATGTCTCGGAGGGCCTaGACATCCCGCAGCCTCCACTCGGGCTTCTCCTGC	+
Preference number: 6 (lower is better) Translates to: YGYSFRTMSRRA*TSRSLHSGFSC Trigger: GCAGGAGAAGCCCGAGTGGAGGCTGCGGGATGTGCAGGCCCTCCGAGACATGGTGCGGAAGGAGTACCCATA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000156839.2 ENSMUST00000171696.8
CDS CAA 72 bp	GAGTTGAGAACGTCTTTCAGGGCTGACGGCCTCAGGTaGCTGAAGACCTCTGGCCAGCTCCGCCTGCAGCCG	+
Preference number: 6 (lower is better) Translates to: ELRTSFRADGLR*LKTSGQLRLQP Trigger: CGGCTGCAGGCGGAGCTGGCCAGAGGTCTTCAGCAACCTGAGGCCGTCAGCCCTGAAAGACGTTCTCAACTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000156839.2 ENSMUST00000171696.8
CDS TCA 72 bp	AGACCTCTGGCCAGCTCCGCCTGCAGCCGTGGTAGTTaGCCAGCAGCTGCAGGGCCCGGTCATAATCAAACT	+
Preference number: 6 (lower is better) Translates to: RPLASSACSRGS*PAAAGPGHNQT Trigger: AGTTTGATTATGACCGGGCCCTGCAGCTGCTGGTCAACTACCACGGCTGCAGGCGGAGCTGGCCAGAGGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000156839.2 ENSMUST00000171696.8
CDS CCA 72 bp	CAACAGGAAGGCATCGTCCAGCGACGTGCTCAGGTATaGGTACTCCTTCCGCACCATGTCTCGGAGGGCCTG	+
Preference number: 6 (lower is better) Translates to: QQEGIVQRRAQV*VLLPHHVSEGL Trigger: CAGGCCCTCCGAGACATGGTGCGGAAGGAGTACCCATACCTGAGCACGTCGCTGGACGATGCCTTCCTGTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000156839.2 ENSMUST00000171696.8
CDS CCA 72 bp	CGGATGCAGAGGACATGGCAGCCCCTGGGGTCCGTGTaGGGCAGCACTGTAAGGAATCCAGAGTTGAGAACG	+
Preference number: 6 (lower is better) Translates to: RMQRTWQPLGSV*GSTVRNPELRT Trigger: CGTTCTCAACTCTGGATTCCTTACAGTGCTGCCCCACACGGACCCCAGGGGCTGCCATGTCCTCTGCATCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000156839.2 ENSMUST00000171696.8
CDS GCA 72 bp	TCAGAAAGCGCAACAGGAAGGCATCGTCCAGCGACGTaGTCAGGTATGGGTACTCCTTCCGCACCATGTCTC	+
Preference number: 6 (lower is better) Translates to: SESATGRHRPAT*SGMGTPSAPCL Trigger: GAGACATGGTGCGGAAGGAGTACCCATACCTGAGCACGTCGCTGGACGATGCCTTCCTGTTGCGCTTTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000156839.2 ENSMUST00000171696.8
CDS TCA 72 bp	TGTAAGGAATCCAGAGTTGAGAACGTCTTTCAGGGCTaGCGGCCTCAGGTTGCTGAAGACCTCTGGCCAGCT	+
Preference number: 6 (lower is better) Translates to: CKESRVENVFQG*RPQVAEDLWPA Trigger: AGCTGGCCAGAGGTCTTCAGCAACCTGAGGCCGTCAGCCCTGAAAGACGTTCTCAACTCTGGATTCCTTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109405.10 ENSMUST00000109408.10 ENSMUST00000156839.2 ENSMUST00000171696.8
CDS CCA 72 bp	TACGGCTCGGATGTTCTCGGTAATTGGGTAGTTGCTTaGTATCCATCTGTCTGGTCGGATGCAGAGGACATG	+
Preference number: 6 (lower is better) Translates to: YGSDVLGNWVVA*YPSVWSDAEDM Trigger: CATGTCCTCTGCATCCGACCAGACAGATGGATACCAAGCAACTACCCAATTACCGAGAACATCCGAGCCGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109408.10 ENSMUST00000156839.2 ENSMUST00000171696.8
CDS GCA 72 bp	GCCCTTAAATATCCGAGGTTCGTTCACTATGTGAACTaGTTTTATCCGAATGGGGAAGCCATCCTGAAGGAT	+
Preference number: 6 (lower is better) Translates to: ALKYPRFVHYVN*FYPNGEAILKD Trigger: ATCCTTCAGGATGGCTTCCCCATTCGGATAAAAGCAGTTCACATAGTGAACGAACCTCGGATATTTAAGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109408.10 ENSMUST00000171696.8

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu