Pregenerated sensors for TTPA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073988Ensembl transcript IDs: ENSMUST00000098244.2, ENSMUST00000117632.8, ENSMUST00000121491.8, ENSMUST00000125799.8
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGCACGGTGAGCACCTATGGAGCTCAACTTTCAGAATATGTTTCTaGCACAAGTGTGGTGAAGCCATGTGGAAAGTTCCAGTTATTCAC | + |
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Preference number: 1 (lower is better) Translates to: QHGEHLWSSTFRICF*HKCGEAMWKVPVIH Trigger: GTGAATAACTGGAACTTTCCACATGGCTTCACCACACTTGTGCCAGAAACATATTCTGAAAGTTGAGCTCCATAGGTGCTCACCGTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| 3UTR TCA 90 bp | AATCCAGAACTAGAGGAACTAGAGATTGTGTGCAGCGTCTGCACTTaGTCTAGCAAAGACACTGAAGGAAGCAGAACAACAGGGAAAGCA | + |
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Preference number: 1 (lower is better) Translates to: NPELEELEIVCSVCT*SSKDTEGSRTTGKA Trigger: TGCTTTCCCTGTTGTTCTGCTTCCTTCAGTGTCTTTGCTAGATCAAGTGCAGACGCTGCACACAATCTCTAGTTCCTCTAGTTCTGGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 |
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| 3UTR TCA 90 bp | CCTATGGAGCTCAACTTTCAGAATATGTTTCTGGCACAAGTGTGGTaGAGCCATGTGGAAAGTTCCAGTTATTCACCAGCACCTTCCAAA | + |
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Preference number: 1 (lower is better) Translates to: PMELNFQNMFLAQVW*SHVESSSYSPAPSK Trigger: TTTGGAAGGTGCTGGTGAATAACTGGAACTTTCCACATGGCTTCACCACACTTGTGCCAGAAACATATTCTGAAAGTTGAGCTCCATAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| 3UTR TCA 90 bp | CTGACGCCAACCTTATCTGAGCATCGATATTGTTTCACCATCAGTTaGTACATACAGTATTTCTTTCCAGTAGGTAGCCATCAATCTAGT | + |
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Preference number: 1 (lower is better) Translates to: LTPTLSEHRYCFTIS*YIQYFFPVGSHQSS Trigger: ACTAGATTGATGGCTACCTACTGGAAAGAAATACTGTATGTATCAACTGATGGTGAAACAATATCGATGCTCAGATAAGGTTGGCGTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| 3UTR GCA 90 bp | GAAAGTTCCAGTTATTCACCAGCACCTTCCAAACAGTTTACACATTaGTCATTAGTGTTCTCTGTAGAACTGCTTCACTGTAGAAACGTT | + |
|
Preference number: 1 (lower is better) Translates to: ESSSYSPAPSKQFTH*SLVFSVELLHCRNV Trigger: AACGTTTCTACAGTGAAGCAGTTCTACAGAGAACACTAATGAGCAATGTGTAAACTGTTTGGAAGGTGCTGGTGAATAACTGGAACTTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| 3UTR TCA 90 bp | GTTGAAGGCTGTGCTGAATATGGGATAAGATTACATCTTTCTCAATaGATGGAAGTCTTAGAAATGAACCACACTGTGTTAGAGACAGCA | + |
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Preference number: 1 (lower is better) Translates to: VEGCAEYGIRLHLSQ*MEVLEMNHTVLETA Trigger: TGCTGTCTCTAACACAGTGTGGTTCATTTCTAAGACTTCCATTCATTGAGAAAGATGTAATCTTATCCCATATTCAGCACAGCCTTCAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGTAAAGCAAATTATTGTGAAATTCAGCAGCACGGTGAGCACCTATGGAGCTCTGGCACAAGTGTGGTaGAGCCATGTGGAAAGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: IVKQIIVKFSSTVSTYGALAQVW*SHVESS Trigger: GGAACTTTCCACATGGCTTCACCACACTTGTGCCAG...AGCTCCATAGGTGCTCACCGTGCTGCTGAATTTCACAATAATTTGCTTTACTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| 3UTR-3UTR TCA 90 bp | TGGAGCTCAACTTTCAGAATATGTTTCTGGCACAAGTGTGGTGAAGCCATGTGGTGTACTTCCATCGACTaGCATTTAAATTCAGGTTAC | + |
|
Preference number: 2 (lower is better) Translates to: WSSTFRICFWHKCGEAMWCTSID*HLNSGY Trigger: GTAACCTGAATTTAAATGTCAGTCGATGGAAGTACA...CCACATGGCTTCACCACACTTGTGCCAGAAACATATTCTGAAAGTTGAGCTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCTCAAATCCAGAACTAGAGGAACTAGAGATTGTGTGCAGCGTCTGCACTTGTCTCAGAAATGCTGCTaGGATAATCTTCAGACTTCA | + |
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Preference number: 2 (lower is better) Translates to: FLKSRTRGTRDCVQRLHLSQKCC*DNLQTS Trigger: TGAAGTCTGAAGATTATCTCAGCAGCATTTCTGAGA...CAAGTGCAGACGCTGCACACAATCTCTAGTTCCTCTAGTTCTGGATTTGAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117632.8 |
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| 3UTR-3UTR GCA 90 bp | TGGAGCTCAACTTTCAGAATATGTTTCTGGCACAAGTGTGGTGAAGCCATGTGGACATGTAGCTATGTTTaGTCTTCAAGTTCAAACAGG | + |
|
Preference number: 2 (lower is better) Translates to: WSSTFRICFWHKCGEAMWTCSYV*SSSSNR Trigger: CCTGTTTGAACTTGAAGAGCAAACATAGCTACATGT...CCACATGGCTTCACCACACTTGTGCCAGAAACATATTCTGAAAGTTGAGCTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| 3UTR-3UTR CCA 90 bp | ACATTAGCCTTTATTGTAATGTGCCATTCCTTCACAGAGTCATGGCACGTGACTCATACAGAGACACACTaGAACAGCTGCTTTACATGT | + |
|
Preference number: 2 (lower is better) Translates to: TLAFIVMCHSFTESWHVTHTETH*NSCFTC Trigger: ACATGTAAAGCAGCTGTTCCAGTGTGTCTCTGTATG...AGTCACGTGCCATGACTCTGTGAAGGAATGGCACATTACAATAAAGGCTAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTCAGAATATGTTTCTGGCACAAGTGTGGTGAAGCCATGTGGAAAGTTCCAGTCTCTAAAGAACATCTaGCCCTCCTTTCACTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: LSEYVSGTSVVKPCGKFQSLKNI*PSFHFC Trigger: ACAAAAGTGAAAGGAGGGCCAGATGTTCTTTAGAGA...CTGGAACTTTCCACATGGCTTCACCACACTTGTGCCAGAAACATATTCTGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| 3UTR-3UTR TCA 90 bp | ACATTAGCCTTTATTGTAATGTGCCATTCCTTCACAGAGTCATGGCACGTGACTGCACATCCCAGCTACTaGCTGTTTAAATTAAATCGT | + |
|
Preference number: 2 (lower is better) Translates to: TLAFIVMCHSFTESWHVTAHPSY*LFKLNR Trigger: ACGATTTAATTTAAACAGTCAGTAGCTGGGATGTGC...AGTCACGTGCCATGACTCTGTGAAGGAATGGCACATTACAATAAAGGCTAATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| 3UTR-3UTR GCA 90 bp | CATCTGGCCCTCCTTTCACTTTTGTCAGAGGTATATGTACTGAGAATCGTAAGTACACACTGGAACAGCTaGTTTACATGTAGCTATGTT | + |
|
Preference number: 2 (lower is better) Translates to: HLALLSLLSEVYVLRIVSTHWNS*FTCSYV Trigger: AACATAGCTACATGTAAAGCAGCTGTTCCAGTGTGT...ACTTACGATTCTCAGTACATATACCTCTGACAAAAGTGAAAGGAGGGCCAGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| 3UTR-3UTR CCA 90 bp | GATTGTATTCAGGACAGTCTGATTTATATGCTGACGCCAACCTTATCTGAGCATCATACAGAGACACACTaGAACAGCTGCTTTACATGT | + |
|
Preference number: 2 (lower is better) Translates to: DCIQDSLIYMLTPTLSEHHTETH*NSCFTC Trigger: ACATGTAAAGCAGCTGTTCCAGTGTGTCTCTGTATG...ATGCTCAGATAAGGTTGGCGTCAGCATATAAATCAGACTGTCCTGAATACAATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| 3UTR-3UTR TCA 90 bp | CAAAACATTAGCCTTTATTGTAATGTGCCATTCCTTCACAGAGTCATGGCACGTAAATACAAAACAGTGTaGGAAACCTCTCAACTGTCC | + |
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Preference number: 2 (lower is better) Translates to: QNISLYCNVPFLHRVMARKYKTV*ETSQLS Trigger: GGACAGTTGAGAGGTTTCTCACACTGTTTTGTATTT...ACGTGCCATGACTCTGTGAAGGAATGGCACATTACAATAAAGGCTAATGTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| 3UTR-3UTR TCA 90 bp | GCACCTTCCAAACAGTTTACACATTGCTCATTAGTGTTCTCTGTAGAACTGCTTAAATACAAAACAGTGTaGGAAACCTCTCAACTGTCC | + |
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Preference number: 2 (lower is better) Translates to: APSKQFTHCSLVFSVELLKYKTV*ETSQLS Trigger: GGACAGTTGAGAGGTTTCTCACACTGTTTTGTATTT...AAGCAGTTCTACAGAGAACACTAATGAGCAATGTGTAAACTGTTTGGAAGGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| 3UTR-3UTR GCA 90 bp | CATCTGGCCCTCCTTTCACTTTTGTCAGAGGTATATGTACTGAGAATCGTAAGTACATGTAGCTATGTTTaGTCTTCAAGTTCAAACAGG | + |
|
Preference number: 2 (lower is better) Translates to: HLALLSLLSEVYVLRIVSTCSYV*SSSSNR Trigger: CCTGTTTGAACTTGAAGAGCAAACATAGCTACATGT...ACTTACGATTCTCAGTACATATACCTCTGACAAAAGTGAAAGGAGGGCCAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAACATTAGCCTTTATTGTAATGTGCCATTCCTTCACAGAGTCATGGCACGTACACACTGGAACAGCTaGTTTACATGTAGCTATGTT | + |
|
Preference number: 2 (lower is better) Translates to: QNISLYCNVPFLHRVMARTHWNS*FTCSYV Trigger: AACATAGCTACATGTAAAGCAGCTGTTCCAGTGTGT...ACGTGCCATGACTCTGTGAAGGAATGGCACATTACAATAAAGGCTAATGTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| 3UTR-3UTR CCA 90 bp | CAAAACATTAGCCTTTATTGTAATGTGCCATTCCTTCACAGAGTCATGGCACGTTCTCTAAAGAACATCTaGCCCTCCTTTCACTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: QNISLYCNVPFLHRVMARSLKNI*PSFHFC Trigger: ACAAAAGTGAAAGGAGGGCCAGATGTTCTTTAGAGA...ACGTGCCATGACTCTGTGAAGGAATGGCACATTACAATAAAGGCTAATGTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGTAAAGCAAATTATTGTGAAATTCAGCAGCACGGTGAGCACCTATGGAGCTTCTCTAAAGAACATCTaGCCCTCCTTTCACTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: IVKQIIVKFSSTVSTYGASLKNI*PSFHFC Trigger: ACAAAAGTGAAAGGAGGGCCAGATGTTCTTTAGAGA...AGCTCCATAGGTGCTCACCGTGCTGCTGAATTTCACAATAATTTGCTTTACTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| 3UTR-3UTR TCA 90 bp | GCACCTTCCAAACAGTTTACACATTGCTCATTAGTGTTCTCTGTAGAACTGCTTCGTCTAGTTGCTAAGTaGAAATTAAACACGTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: APSKQFTHCSLVFSVELLRLVAK*KLNTFS Trigger: AGAGAACGTGTTTAATTTTCACTTAGCAACTAGACG...AAGCAGTTCTACAGAGAACACTAATGAGCAATGTGTAAACTGTTTGGAAGGTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| 3UTR-3UTR GCA 90 bp | GAGATGAGATTGTATTCAGGACAGTCTGATTTATATGCTGACGCCAACCTTATCACATGTAGCTATGTTTaGTCTTCAAGTTCAAACAGG | + |
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Preference number: 2 (lower is better) Translates to: EMRLYSGQSDLYADANLITCSYV*SSSSNR Trigger: CCTGTTTGAACTTGAAGAGCAAACATAGCTACATGT...GATAAGGTTGGCGTCAGCATATAAATCAGACTGTCCTGAATACAATCTCATCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| 3UTR-3UTR CCA 90 bp | GAGATGAGATTGTATTCAGGACAGTCTGATTTATATGCTGACGCCAACCTTATCGAAATAACTTCTCATTaGATGGTCTCAGAAATGCTG | + |
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Preference number: 2 (lower is better) Translates to: EMRLYSGQSDLYADANLIEITSH*MVSEML Trigger: CAGCATTTCTGAGACCATCCAATGAGAAGTTATTTC...GATAAGGTTGGCGTCAGCATATAAATCAGACTGTCCTGAATACAATCTCATCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117632.8 |
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| 3UTR CAA 90 bp | AAATTAAACACGTTCTCTAAAGAACATCTGGCCCTCCTTTCACTTTaGTCAGAGGTATATGTACTGAGAATCGTAAGTATCAGCTCATCT | + |
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Preference number: 2 (lower is better) Translates to: KLNTFSKEHLALLSL*SEVYVLRIVSISSS Trigger: AGATGAGCTGATACTTACGATTCTCAGTACATATACCTCTGACAAAAGTGAAAGGAGGGCCAGATGTTCTTTAGAGAACGTGTTTAATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| 3UTR-3UTR TCA 90 bp | CACATTCAAAACATTAGCCTTTATTGTAATGTGCCATTCCTTCACAGAGTCATGGCACATCCCAGCTACTaGCTGTTTAAATTAAATCGT | + |
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Preference number: 2 (lower is better) Translates to: HIQNISLYCNVPFLHRVMAHPSY*LFKLNR Trigger: ACGATTTAATTTAAACAGTCAGTAGCTGGGATGTGC...CATGACTCTGTGAAGGAATGGCACATTACAATAAAGGCTAATGTTTTGAATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| 3UTR TCA 72 bp | CTAGAGGAACTAGAGATTGTGTGCAGCGTCTGCACTTaGTCTAGCAAAGACACTGAAGGAAGCAGAACAACA | + |
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Preference number: 3 (lower is better) Translates to: LEELEIVCSVCT*SSKDTEGSRTT Trigger: TGTTGTTCTGCTTCCTTCAGTGTCTTTGCTAGATCAAGTGCAGACGCTGCACACAATCTCTAGTTCCTCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 |
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| 3UTR CCA 72 bp | GAGCACCTATGGAGCTCAACTTTCAGAATATGTTTCTaGCACAAGTGTGGTGAAGCCATGTGGAAAGTTCCA | + |
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Preference number: 3 (lower is better) Translates to: EHLWSSTFRICF*HKCGEAMWKVP Trigger: TGGAACTTTCCACATGGCTTCACCACACTTGTGCCAGAAACATATTCTGAAAGTTGAGCTCCATAGGTGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| 3UTR-3UTR CAA 90 bp | TGGAGCTCAACTTTCAGAATATGTTTCTGGCACAAGTGTGGTGAAGCCATGTGGGGAAATAACTTCTCATaGGATGGTCTCAGAAATGCT | + |
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Preference number: 3 (lower is better) Translates to: WSSTFRICFWHKCGEAMWGNNFS*DGLRNA Trigger: AGCATTTCTGAGACCATCCAATGAGAAGTTATTTCC...CCACATGGCTTCACCACACTTGTGCCAGAAACATATTCTGAAAGTTGAGCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117632.8 |
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| 3UTR TCA 72 bp | CTCAACTTTCAGAATATGTTTCTGGCACAAGTGTGGTaGAGCCATGTGGAAAGTTCCAGTTATTCACCAGCA | + |
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Preference number: 3 (lower is better) Translates to: LNFQNMFLAQVW*SHVESSSYSPA Trigger: TGCTGGTGAATAACTGGAACTTTCCACATGGCTTCACCACACTTGTGCCAGAAACATATTCTGAAAGTTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| 3UTR CCA 72 bp | AATTATTGTGAAATTCAGCAGCACGGTGAGCACCTATaGAGCTCAACTTTCAGAATATGTTTCTGGCACAAG | + |
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Preference number: 3 (lower is better) Translates to: NYCEIQQHGEHL*SSTFRICFWHK Trigger: CTTGTGCCAGAAACATATTCTGAAAGTTGAGCTCCATAGGTGCTCACCGTGCTGCTGAATTTCACAATAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| 3UTR TCA 72 bp | AACCACACTGTGTTAGAGACAGCACATCCCAGCTACTaGCTGTTTAAATTAAATCGTGGGACTCAGAATATT | + |
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Preference number: 3 (lower is better) Translates to: NHTVLETAHPSY*LFKLNRGTQNI Trigger: AATATTCTGAGTCCCACGATTTAATTTAAACAGTCAGTAGCTGGGATGTGCTGTCTCTAACACAGTGTGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| 3UTR GCA 72 bp | AGTTATTCACCAGCACCTTCCAAACAGTTTACACATTaGTCATTAGTGTTCTCTGTAGAACTGCTTCACTGT | + |
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Preference number: 3 (lower is better) Translates to: SYSPAPSKQFTH*SLVFSVELLHC Trigger: ACAGTGAAGCAGTTCTACAGAGAACACTAATGAGCAATGTGTAAACTGTTTGGAAGGTGCTGGTGAATAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| 3UTR TCA 72 bp | TGTGCTGAATATGGGATAAGATTACATCTTTCTCAATaGATGGAAGTCTTAGAAATGAACCACACTGTGTTA | + |
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Preference number: 3 (lower is better) Translates to: CAEYGIRLHLSQ*MEVLEMNHTVL Trigger: TAACACAGTGTGGTTCATTTCTAAGACTTCCATTCATTGAGAAAGATGTAATCTTATCCCATATTCAGCACA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| CDS-3UTR TCA 90 bp | TGGAGCTCAACTTTCAGAATATGTTTCTGGCACAAGTGTGGTGAAGCCATGTGGGTGCTGAAGCATGCTTaGTTTGTAGTTGTTCCCGTG | + |
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Preference number: 4 (lower is better) Translates to: WSSTFRICFWHKCGEAMWVLKHA*FVVVPV Trigger: CACGGGAACAACTACAAATCAAGCATGCTTCAGCAC...CCACATGGCTTCACCACACTTGTGCCAGAAACATATTCTGAAAGTTGAGCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| CDS-3UTR TCA 90 bp | CATCTGGCCCTCCTTTCACTTTTGTCAGAGGTATATGTACTGAGAATCGTAAGTGTAATTTGGAAAGCATaGGAAACCTGCCAGCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: HLALLSLLSEVYVLRIVSVIWKA*ETCQPS Trigger: GGAAGGCTGGCAGGTTTCTCATGCTTTCCAAATTAC...ACTTACGATTCTCAGTACATATACCTCTGACAAAAGTGAAAGGAGGGCCAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| CDS-3UTR CCA 90 bp | CGCCAACCTTATCTGAGCATCGATATTGTTTCACCATCAGTTGATACATACAGTCCGAGGAAGAATGTCTaGGAAGTGCTGAAGCATGCT | + |
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Preference number: 4 (lower is better) Translates to: RQPYLSIDIVSPSVDTYSPRKNV*EVLKHA Trigger: AGCATGCTTCAGCACTTCCCAGACATTCTTCCTCGG...ACTGTATGTATCAACTGATGGTGAAACAATATCGATGCTCAGATAAGGTTGGCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| CDS-3UTR TCA 90 bp | CGCCAACCTTATCTGAGCATCGATATTGTTTCACCATCAGTTGATACATACAGTGTGCTGAAGCATGCTTaGTTTGTAGTTGTTCCCGTG | + |
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Preference number: 4 (lower is better) Translates to: RQPYLSIDIVSPSVDTYSVLKHA*FVVVPV Trigger: CACGGGAACAACTACAAATCAAGCATGCTTCAGCAC...ACTGTATGTATCAACTGATGGTGAAACAATATCGATGCTCAGATAAGGTTGGCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| CDS-3UTR TCA 90 bp | GAGATGAGATTGTATTCAGGACAGTCTGATTTATATGCTGACGCCAACCTTATCGTGCTGAAGCATGCTTaGTTTGTAGTTGTTCCCGTG | + |
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Preference number: 4 (lower is better) Translates to: EMRLYSGQSDLYADANLIVLKHA*FVVVPV Trigger: CACGGGAACAACTACAAATCAAGCATGCTTCAGCAC...GATAAGGTTGGCGTCAGCATATAAATCAGACTGTCCTGAATACAATCTCATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| CDS-3UTR CCA 90 bp | CTTTCAGAATATGTTTCTGGCACAAGTGTGGTGAAGCCATGTGGAAAGTTCCAGCCCACGAACTTTCAGTaGAAAGGAATCTGTAAGTAC | + |
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Preference number: 4 (lower is better) Translates to: LSEYVSGTSVVKPCGKFQPTNFQ*KGICKY Trigger: GTACTTACAGATTCCTTTCCACTGAAAGTTCGTGGG...CTGGAACTTTCCACATGGCTTCACCACACTTGTGCCAGAAACATATTCTGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| CDS-3UTR CCA 90 bp | TGGAGCTCAACTTTCAGAATATGTTTCTGGCACAAGTGTGGTGAAGCCATGTGGGGCTCATTTATCAAATaGATCCCACGAACTTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: WSSTFRICFWHKCGEAMWGSFIK*IPRTFS Trigger: ACTGAAAGTTCGTGGGATCCATTTGATAAATGAGCC...CCACATGGCTTCACCACACTTGTGCCAGAAACATATTCTGAAAGTTGAGCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| CDS-3UTR CCA 90 bp | TGGAACAGCTGCTTTACATGTAGCTATGTTTGCTCTTCAAGTTCAAACAGGAATCCGAGGAAGAATGTCTaGGAAGTGCTGAAGCATGCT | + |
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Preference number: 4 (lower is better) Translates to: WNSCFTCSYVCSSSSNRNPRKNV*EVLKHA Trigger: AGCATGCTTCAGCACTTCCCAGACATTCTTCCTCGG...ATTCCTGTTTGAACTTGAAGAGCAAACATAGCTACATGTAAAGCAGCTGTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
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| CDS-3UTR CCA 90 bp | TGTCCTGAGATGAGATTGTATTCAGGACAGTCTGATTTATATGCTGACGCCAACGACAAATATCCTCCATaGAGAACTCTTTACCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CPEMRLYSGQSDLYADANDKYPP*RTLYRH Trigger: ATGGCGGTAAAGAGTTCTCCATGGAGGATATTTGTC...GTTGGCGTCAGCATATAAATCAGACTGTCCTGAATACAATCTCATCTCAGGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
||
| CDS-3UTR TCA 90 bp | CACATTCAAAACATTAGCCTTTATTGTAATGTGCCATTCCTTCACAGAGTCATGGTAATTTGGAAAGCATaGGAAACCTGCCAGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HIQNISLYCNVPFLHRVMVIWKA*ETCQPS Trigger: GGAAGGCTGGCAGGTTTCTCATGCTTTCCAAATTAC...CATGACTCTGTGAAGGAATGGCACATTACAATAAAGGCTAATGTTTTGAATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCAGAATATGTTTCTGGCACAAGTGTGGTGAAGCCATGTGGAAAGTTCCAGTTTTGGGTCCCAGTATaGAATTCTGTAAATGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSEYVSGTSVVKPCGKFQFWVPV*NSVNEN Trigger: GTTCTCATTTACAGAATTGCATACTGGGACCCAAAA...CTGGAACTTTCCACATGGCTTCACCACACTTGTGCCAGAAACATATTCTGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
||
| CDS-3UTR CCA 90 bp | GAGATGAGATTGTATTCAGGACAGTCTGATTTATATGCTGACGCCAACCTTATCCCCACGAACTTTCAGTaGAAAGGAATCTGTAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: EMRLYSGQSDLYADANLIPTNFQ*KGICKY Trigger: GTACTTACAGATTCCTTTCCACTGAAAGTTCGTGGG...GATAAGGTTGGCGTCAGCATATAAATCAGACTGTCCTGAATACAATCTCATCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
||
| CDS-3UTR TCA 90 bp | ACACACTGGAACAGCTGCTTTACATGTAGCTATGTTTGCTCTTCAAGTTCAAACTCTCAGAAATGCTGCTaGGATAATCTTCAGACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: THWNSCFTCSYVCSSSSNSQKCC*DNLQTS Trigger: TGAAGTCTGAAGATTATCTCAGCAGCATTTCTGAGA...GTTTGAACTTGAAGAGCAAACATAGCTACATGTAAAGCAGCTGTTCCAGTGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098244.2 ENSMUST00000121491.8 |
||
| CDS-3UTR GCA 90 bp | ATGAACTGTCCTGAGATGAGATTGTATTCAGGACAGTCTGATTTATATGCTGACGGAAGTGCTGAAGCATaGTTGATTTGTAGTTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MNCPEMRLYSGQSDLYADGSAEA*LICSCS Trigger: GGAACAACTACAAATCAAGCATGCTTCAGCACTTCC...GTCAGCATATAAATCAGACTGTCCTGAATACAATCTCATCTCAGGACAGTTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
||
| CDS-3UTR CCA 90 bp | ATGAACTGTCCTGAGATGAGATTGTATTCAGGACAGTCTGATTTATATGCTGACCCCACGAACTTTCAGTaGAAAGGAATCTGTAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: MNCPEMRLYSGQSDLYADPTNFQ*KGICKY Trigger: GTACTTACAGATTCCTTTCCACTGAAAGTTCGTGGG...GTCAGCATATAAATCAGACTGTCCTGAATACAATCTCATCTCAGGACAGTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
||
| CDS-3UTR CCA 90 bp | CGCCAACCTTATCTGAGCATCGATATTGTTTCACCATCAGTTGATACATACAGTGGCTCATTTATCAAATaGATCCCACGAACTTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RQPYLSIDIVSPSVDTYSGSFIK*IPRTFS Trigger: ACTGAAAGTTCGTGGGATCCATTTGATAAATGAGCC...ACTGTATGTATCAACTGATGGTGAAACAATATCGATGCTCAGATAAGGTTGGCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
||
| CDS-3UTR CCA 90 bp | ACACACTGGAACAGCTGCTTTACATGTAGCTATGTTTGCTCTTCAAGTTCAAACATGGAGAAGACAGCATaGAAAATGACTGGCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: THWNSCFTCSYVCSSSSNMEKTA*KMTGSF Trigger: AAATGAGCCAGTCATTTTCCATGCTGTCTTCTCCAT...GTTTGAACTTGAAGAGCAAACATAGCTACATGTAAAGCAGCTGTTCCAGTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
||
| CDS-3UTR CCA 90 bp | GATTGTATTCAGGACAGTCTGATTTATATGCTGACGCCAACCTTATCTGAGCATATGGAGAAGACAGCATaGAAAATGACTGGCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: DCIQDSLIYMLTPTLSEHMEKTA*KMTGSF Trigger: AAATGAGCCAGTCATTTTCCATGCTGTCTTCTCCAT...ATGCTCAGATAAGGTTGGCGTCAGCATATAAATCAGACTGTCCTGAATACAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
||
| CDS-3UTR CCA 90 bp | TGGAACAGCTGCTTTACATGTAGCTATGTTTGCTCTTCAAGTTCAAACAGGAATGACAAATATCCTCCATaGAGAACTCTTTACCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WNSCFTCSYVCSSSSNRNDKYPP*RTLYRH Trigger: ATGGCGGTAAAGAGTTCTCCATGGAGGATATTTGTC...ATTCCTGTTTGAACTTGAAGAGCAAACATAGCTACATGTAAAGCAGCTGTTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
||
| 3UTR CAA 72 bp | ACGTTCTCTAAAGAACATCTGGCCCTCCTTTCACTTTaGTCAGAGGTATATGTACTGAGAATCGTAAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: TFSKEHLALLSL*SEVYVLRIVSI Trigger: GATACTTACGATTCTCAGTACATATACCTCTGACAAAAGTGAAAGGAGGGCCAGATGTTCTTTAGAGAACGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
||
| CDS-3UTR GCA 90 bp | GCACCTTCCAAACAGTTTACACATTGCTCATTAGTGTTCTCTGTAGAACTGCTTTTTTGGGTCCCAGTATaGAATTCTGTAAATGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: APSKQFTHCSLVFSVELLFWVPV*NSVNEN Trigger: GTTCTCATTTACAGAATTGCATACTGGGACCCAAAA...AAGCAGTTCTACAGAGAACACTAATGAGCAATGTGTAAACTGTTTGGAAGGTGC 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
||
| CDS-3UTR GCA 90 bp | GATTGTATTCAGGACAGTCTGATTTATATGCTGACGCCAACCTTATCTGAGCATTTTTGGGTCCCAGTATaGAATTCTGTAAATGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: DCIQDSLIYMLTPTLSEHFWVPV*NSVNEN Trigger: GTTCTCATTTACAGAATTGCATACTGGGACCCAAAA...ATGCTCAGATAAGGTTGGCGTCAGCATATAAATCAGACTGTCCTGAATACAATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
||
| CDS-3UTR GCA 90 bp | CACATTCAAAACATTAGCCTTTATTGTAATGTGCCATTCCTTCACAGAGTCATGGGAAGTGCTGAAGCATaGTTGATTTGTAGTTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HIQNISLYCNVPFLHRVMGSAEA*LICSCS Trigger: GGAACAACTACAAATCAAGCATGCTTCAGCACTTCC...CATGACTCTGTGAAGGAATGGCACATTACAATAAAGGCTAATGTTTTGAATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGCATCGATATTGTTTCACCATCAGTTGATACATACAGTATTTCTTTCCAGGACAAATATCCTCCATaGAGAACTCTTTACCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LSIDIVSPSVDTYSISFQDKYPP*RTLYRH Trigger: ATGGCGGTAAAGAGTTCTCCATGGAGGATATTTGTC...CTGGAAAGAAATACTGTATGTATCAACTGATGGTGAAACAATATCGATGCTCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGCATCGATATTGTTTCACCATCAGTTGATACATACAGTATTTCTTTCCAGTCTCAGAAATGCTGCTaGGATAATCTTCAGACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSIDIVSPSVDTYSISFQSQKCC*DNLQTS Trigger: TGAAGTCTGAAGATTATCTCAGCAGCATTTCTGAGA...CTGGAAAGAAATACTGTATGTATCAACTGATGGTGAAACAATATCGATGCTCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098244.2 ENSMUST00000121491.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGTATAAACATTATGCCAGAAGTTGAAGGCTGTGCTGAATATGGGATAAGAATGGAGAAGACAGCATaGAAAATGACTGGCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LSINIMPEVEGCAEYGIRMEKTA*KMTGSF Trigger: AAATGAGCCAGTCATTTTCCATGCTGTCTTCTCCAT...TCTTATCCCATATTCAGCACAGCCTTCAACTTCTGGCATAATGTTTATACTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
||
| CDS CCA 90 bp | ACGCCTGCCTCCTGCACCCGGCGCCTGAGCTCCGCCAGGCCGGGCTaGAGCAGCGGCGAGTGGTCGGGCAGCTCGTTGAGCTGTTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TPASCTRRLSSARPG*SSGEWSGSSLSCFP Trigger: TGGGAAACAGCTCAACGAGCTGCCCGACCACTCGCCGCTGCTCCAGCCCGGCCTGGCGGAGCTCAGGCGCCGGGTGCAGGAGGCAGGCGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 |
||
| CDS GCA 90 bp | TACCGCCATATTCCCGAGGAAGAATGTCTGGGAAGTGCTGAAGCATaGTTGATTTGTAGTTGTTCCCGTGCAGATGAATCGGTCCTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: YRHIPEEECLGSAEA*LICSCSRADESVLN Trigger: ATTAAGGACCGATTCATCTGCACGGGAACAACTACAAATCAAGCATGCTTCAGCACTTCCCAGACATTCTTCCTCGGGAATATGGCGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117632.8 |
||
| CDS TCA 90 bp | ACCTGCCAGCCTTCCAGGTCAAATATAGCTTTAACTCCATTGCGTTaGGTTTCCACCTCCTGTACAATGAGCTCTGATGTGATCAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: TCQPSRSNIALTPLR*VSTSCTMSSDVIRL Trigger: AAGTCTGATCACATCAGAGCTCATTGTACAGGAGGTGGAAACTCAACGCAATGGAGTTAAAGCTATATTTGACCTGGAAGGCTGGCAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
||
| CDS-3UTR CAA 90 bp | TGGAGCTCAACTTTCAGAATATGTTTCTGGCACAAGTGTGGTGAAGCCATGTGGTACAGATGGGGTAATTaGGAAAGCATGAGAAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: WSSTFRICFWHKCGEAMWYRWGN*ESMRNL Trigger: CAGGTTTCTCATGCTTTCCAAATTACCCCATCTGTA...CCACATGGCTTCACCACACTTGTGCCAGAAACATATTCTGAAAGTTGAGCTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
||
| CDS-3UTR CAA 90 bp | TGTCCTGAGATGAGATTGTATTCAGGACAGTCTGATTTATATGCTGACGCCAACTTTAACTCCATTGCGTaGAGTTTCCACCTCCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: CPEMRLYSGQSDLYADANFNSIA*SFHLLY Trigger: GTACAGGAGGTGGAAACTCAACGCAATGGAGTTAAA...GTTGGCGTCAGCATATAAATCAGACTGTCCTGAATACAATCTCATCTCAGGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
||
| CDS-3UTR CAA 90 bp | CATCTGGCCCTCCTTTCACTTTTGTCAGAGGTATATGTACTGAGAATCGTAAGTTTTAACTCCATTGCGTaGAGTTTCCACCTCCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: HLALLSLLSEVYVLRIVSFNSIA*SFHLLY Trigger: GTACAGGAGGTGGAAACTCAACGCAATGGAGTTAAA...ACTTACGATTCTCAGTACATATACCTCTGACAAAAGTGAAAGGAGGGCCAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCAGAATATGTTTCTGGCACAAGTGTGGTGAAGCCATGTGGAAAGTTCCAGTACAGATGGGGTAATTaGGAAAGCATGAGAAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSEYVSGTSVVKPCGKFQYRWGN*ESMRNL Trigger: CAGGTTTCTCATGCTTTCCAAATTACCCCATCTGTA...CTGGAACTTTCCACATGGCTTCACCACACTTGTGCCAGAAACATATTCTGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
||
| CDS-3UTR CAA 90 bp | CATCTGGCCCTCCTTTCACTTTTGTCAGAGGTATATGTACTGAGAATCGTAAGTACAGCAGCAATCTTCTaGGCTACAGATGGGGTAATT | + |
|
Preference number: 5 (lower is better) Translates to: HLALLSLLSEVYVLRIVSTAAIF*ATDGVI Trigger: AATTACCCCATCTGTAGCCAAGAAGATTGCTGCTGT...ACTTACGATTCTCAGTACATATACCTCTGACAAAAGTGAAAGGAGGGCCAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
||
| CDS-3UTR CAA 90 bp | ATAGTAAAGCAAATTATTGTGAAATTCAGCAGCACGGTGAGCACCTATGGAGCTACAGCAGCAATCTTCTaGGCTACAGATGGGGTAATT | + |
|
Preference number: 5 (lower is better) Translates to: IVKQIIVKFSSTVSTYGATAAIF*ATDGVI Trigger: AATTACCCCATCTGTAGCCAAGAAGATTGCTGCTGT...AGCTCCATAGGTGCTCACCGTGCTGCTGAATTTCACAATAATTTGCTTTACTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
||
| CDS-3UTR CAA 90 bp | TGGAACAGCTGCTTTACATGTAGCTATGTTTGCTCTTCAAGTTCAAACAGGAATTTTAACTCCATTGCGTaGAGTTTCCACCTCCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: WNSCFTCSYVCSSSSNRNFNSIA*SFHLLY Trigger: GTACAGGAGGTGGAAACTCAACGCAATGGAGTTAAA...ATTCCTGTTTGAACTTGAAGAGCAAACATAGCTACATGTAAAGCAGCTGTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
||
| CDS TCA 90 bp | TTTAACTCCATTGCGTTGAGTTTCCACCTCCTGTACAATGAGCTCTaGTGTGATCAGACTTACACGAAATACATCATAAGCTGTAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: FNSIALSFHLLYNEL*CDQTYTKYIISCKN Trigger: GTTTTTACAGCTTATGATGTATTTCGTGTAAGTCTGATCACATCAGAGCTCATTGTACAGGAGGTGGAAACTCAACGCAATGGAGTTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 ENSMUST00000125799.8 |
||
| CDS-3UTR CAA 90 bp | TTAAGTATAAACATTATGCCAGAAGTTGAAGGCTGTGCTGAATATGGGATAAGAACAGCAGCAATCTTCTaGGCTACAGATGGGGTAATT | + |
|
Preference number: 5 (lower is better) Translates to: LSINIMPEVEGCAEYGIRTAAIF*ATDGVI Trigger: AATTACCCCATCTGTAGCCAAGAAGATTGCTGCTGT...TCTTATCCCATATTCAGCACAGCCTTCAACTTCTGGCATAATGTTTATACTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
||
| CDS TCA 72 bp | GGGTCTGCGGGACGCCTGCCTCCTGCACCCGGCGCCTaGGCTCCGCCAGGCCGGGCTGGAGCAGCGGCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GSAGRLPPAPGA*APPGRAGAAAS Trigger: ACTCGCCGCTGCTCCAGCCCGGCCTGGCGGAGCTCAGGCGCCGGGTGCAGGAGGCAGGCGTCCCGCAGACCC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 |
||
| CDS GCA 72 bp | AGCGTCTGTGAGAGGCTGCGGGGTCTGCGGGACGCCTaGCTCCTGCACCCGGCGCCTGAGCTCCGCCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SVCERLRGLRDA*LLHPAPELRQA Trigger: GGCCTGGCGGAGCTCAGGCGCCGGGTGCAGGAGGCAGGCGTCCCGCAGACCCCGCAGCCTCTCACAGACGCT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 |
||
| CDS CAA 72 bp | CCGGGCTGGAGCAGCGGCGAGTGGTCGGGCAGCTCGTaGAGCTGTTTCCCAACCAATGGCCCCGGCCGCATC | + |
|
Preference number: 6 (lower is better) Translates to: PGWSSGEWSGSS*SCFPTNGPGRI Trigger: GATGCGGCCGGGGCCATTGGTTGGGAAACAGCTCAACGAGCTGCCCGACCACTCGCCGCTGCTCCAGCCCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 |
||
| CDS TCA 72 bp | CGGGCTGGAGCAGCGGCGAGTGGTCGGGCAGCTCGTTaGGCTGTTTCCCAACCAATGGCCCCGGCCGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: RAGAAASGRAAR*AVSQPMAPAAS Trigger: AGATGCGGCCGGGGCCATTGGTTGGGAAACAGCTCAACGAGCTGCCCGACCACTCGCCGCTGCTCCAGCCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 |
||
| CDS CCA 72 bp | CTGAGCTCCGCCAGGCCGGGCTGGAGCAGCGGCGAGTaGTCGGGCAGCTCGTTGAGCTGTTTCCCAACCAAT | + |
|
Preference number: 6 (lower is better) Translates to: LSSARPGWSSGE*SGSSLSCFPTN Trigger: ATTGGTTGGGAAACAGCTCAACGAGCTGCCCGACCACTCGCCGCTGCTCCAGCCCGGCCTGGCGGAGCTCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 |
||
| CDS CAA 90 bp | CGCCATATTCCCGAGGAAGAATGTCTGGGAAGTGCTGAAGCATGCTaGATTTGTAGTTGTTCCCGTGCAGATGAATCGGTCCTTAATCTT | + |
|
Preference number: 6 (lower is better) Translates to: RHIPEEECLGSAEAC*ICSCSRADESVLNL Trigger: AAGATTAAGGACCGATTCATCTGCACGGGAACAACTACAAATCAAGCATGCTTCAGCACTTCCCAGACATTCTTCCTCGGGAATATGGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117632.8 |
||
| CDS GCA 72 bp | ATTCCCGAGGAAGAATGTCTGGGAAGTGCTGAAGCATaGTTGATTTGTAGTTGTTCCCGTGCAGATGAATCC | + |
|
Preference number: 6 (lower is better) Translates to: IPEEECLGSAEA*LICSCSRADES Trigger: GGATTCATCTGCACGGGAACAACTACAAATCAAGCATGCTTCAGCACTTCCCAGACATTCTTCCTCGGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098244.2 ENSMUST00000121491.8 |
||
| CDS GCA 72 bp | ATTCCCGAGGAAGAATGTCTGGGAAGTGCTGAAGCATaGTTGATTTGTAGTTGTTCCCGTGCAGATGAATCG | + |
|
Preference number: 6 (lower is better) Translates to: IPEEECLGSAEA*LICSCSRADES Trigger: CGATTCATCTGCACGGGAACAACTACAAATCAAGCATGCTTCAGCACTTCCCAGACATTCTTCCTCGGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117632.8 |
||
| CDS TCA 72 bp | CCTTCCAGGTCAAATATAGCTTTAACTCCATTGCGTTaGGTTTCCACCTCCTGTACAATGAGCTCTGATGTG | + |
|
Preference number: 6 (lower is better) Translates to: PSRSNIALTPLR*VSTSCTMSSDV Trigger: CACATCAGAGCTCATTGTACAGGAGGTGGAAACTCAACGCAATGGAGTTAAAGCTATATTTGACCTGGAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 |
||
| CDS TCA 72 bp | ATTGCGTTGAGTTTCCACCTCCTGTACAATGAGCTCTaGTGTGATCAGACTTACACGAAATACATCATAAGC | + |
|
Preference number: 6 (lower is better) Translates to: IALSFHLLYNEL*CDQTYTKYIIS Trigger: GCTTATGATGTATTTCGTGTAAGTCTGATCACATCAGAGCTCATTGTACAGGAGGTGGAAACTCAACGCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098244.2 ENSMUST00000117632.8 ENSMUST00000121491.8 ENSMUST00000125799.8 |
||
| CDS CCA 72 bp | CAGATGAATCCGGTCCTTAATCTTTTCAGTCAGAAATaGTTTAATCATGGAGAAGACAGCATGGAAAATGAC | + |
|
Preference number: 6 (lower is better) Translates to: QMNPVLNLFSQK*FNHGEDSMEND Trigger: GTCATTTTCCATGCTGTCTTCTCCATGATTAAACCATTTCTGACTGAAAAGATTAAGGACCGGATTCATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098244.2 ENSMUST00000121491.8 |
||
| CDS CCA 72 bp | GCAGATGAATCGGTCCTTAATCTTTTCAGTCAGAAATaGTTTAATCATGGAGAAGACAGCATGGAAAATGAC | + |
|
Preference number: 6 (lower is better) Translates to: ADESVLNLFSQK*FNHGEDSMEND Trigger: GTCATTTTCCATGCTGTCTTCTCCATGATTAAACCATTTCTGACTGAAAAGATTAAGGACCGATTCATCTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117632.8 |
||