Pregenerated sensors for TTLL9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074673Ensembl transcript IDs: ENSMUST00000099197.9, ENSMUST00000103155.10, ENSMUST00000109801.9, ENSMUST00000146626.9, ENSMUST00000152158.8, ENSMUST00000155631.3, ENSMUST00000165343.8
Found 245 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTGCGCTGTGCTGGAATCGCGCTGCCAGAGGCCAGGGCGGCACCTaGCAGGGCCTCATTTCTTCTGACTGGGGGTCAGCTAGGGGCTTT | + |
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Preference number: 1 (lower is better) Translates to: GALCWNRAARGQGGT*QGLISSDWGSARGF Trigger: AAAGCCCCTAGCTGACCCCCAGTCAGAAGAAATGAGGCCCTGGCAGGTGCCGCCCTGGCCTCTGGCAGCGCGATTCCAGCACAGCGCACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165343.8 |
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| 3UTR CCA 90 bp | GCCAGAGGCCAGGGCGGCACCTGCCAGGGCCTCATTTCTTCTGACTaGGGGTCAGCTAGGGGCTTTCCTCTGCGCTTGAAGGGATCGGAA | + |
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Preference number: 1 (lower is better) Translates to: ARGQGGTCQGLISSD*GSARGFPLRLKGSE Trigger: TTCCGATCCCTTCAAGCGCAGAGGAAAGCCCCTAGCTGACCCCCAGTCAGAAGAAATGAGGCCCTGGCAGGTGCCGCCCTGGCCTCTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165343.8 |
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| 3UTR GCA 90 bp | CTTGTGTCATGGCTGCCTGAGGGGTTCATGTTGGCTCGAGCAGGCTaGGTCTCCACACCGGTGGGTTTCTTCCCCGAAGTGCCCTTCCTC | + |
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Preference number: 1 (lower is better) Translates to: LVSWLPEGFMLARAG*VSTPVGFFPEVPFL Trigger: GAGGAAGGGCACTTCGGGGAAGAAACCCACCGGTGTGGAGACGCAGCCTGCTCGAGCCAACATGAACCCCTCAGGCAGCCATGACACAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
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| 3UTR TCA 90 bp | CCTCCATGTCCACCACGTGCAGGGTATCCTCCAGCAGACAGGTCTTaGGTTCATAGTCCTCCTGGCTGCTGGCCGTCAGGGAAGGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: PPCPPRAGYPPADRS*VHSPPGCWPSGKER Trigger: CCTCTCCTTCCCTGACGGCCAGCAGCCAGGAGGACTATGAACTCAAGACCTGTCTGCTGGAGGATACCCTGCACGTGGTGGACATGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109801.9 ENSMUST00000146626.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
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| 3UTR GCA 90 bp | GTGAAACAGCTGCCACGCTGGAAAAAGGTGAAGACTGGAAAAAGGTaGGCTGTGCTGGAATCGCGCTGCCAGAGGCCAGGGCGGCACCTG | + |
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Preference number: 1 (lower is better) Translates to: VKQLPRWKKVKTGKR*AVLESRCQRPGRHL Trigger: CAGGTGCCGCCCTGGCCTCTGGCAGCGCGATTCCAGCACAGCGCACCTTTTTCCAGTCTTCACCTTTTTCCAGCGTGGCAGCTGTTTCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000099197.9 ENSMUST00000165343.8 |
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| 3UTR CCA 90 bp | GGTCATCAGAACTCCTTGTGTCATGGCTGCCTGAGGGGTTCATGTTaGCTCGAGCAGGCTGCGTCTCCACACCGGTGGGTTTCTTCCCCG | + |
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Preference number: 1 (lower is better) Translates to: GHQNSLCHGCLRGSC*LEQAASPHRWVSSP Trigger: CGGGGAAGAAACCCACCGGTGTGGAGACGCAGCCTGCTCGAGCCAACATGAACCCCTCAGGCAGCCATGACACAAGGAGTTCTGATGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
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| 3UTR GCA 90 bp | TCCCCTGAGATCGGGCGACCTCGTAGTGGTTCCGGAAGTGGCTTATaGGCACGTGCTCATCCATGTAGGTGTGGTCAAAGTTCTCCCGCA | + |
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Preference number: 1 (lower is better) Translates to: SPEIGRPRSGSGSGL*ARAHPCRCGQSSPA Trigger: TGCGGGAGAACTTTGACCACACCTACATGGATGAGCACGTGCGCATAAGCCACTTCCGGAACCACTACGAGGTCGCCCGATCTCAGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146626.9 |
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| 3UTR GCA 90 bp | CCGGGAGGTCATCTTTCTGGTCATCAGAACTCCTTGTGTCATGGCTaGCTGAGGGGTTCATGTTGGCTCGAGCAGGCTGCGTCTCCACAC | + |
|
Preference number: 1 (lower is better) Translates to: PGGHLSGHQNSLCHG*LRGSCWLEQAASPH Trigger: GTGTGGAGACGCAGCCTGCTCGAGCCAACATGAACCCCTCAGGCAGCCATGACACAAGGAGTTCTGATGACCAGAAAGATGACCTCCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
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| 3UTR GCA 90 bp | ACAGAGAGGTCAAGTTGCTCACCCAAGTCACACAGCTGGTATGCTTaGTCTGCCAAGGGCTGGATCACACTGCTCTGCCAAGCGGCCCCA | + |
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Preference number: 1 (lower is better) Translates to: TERSSCSPKSHSWYA*SAKGWITLLCQAAP Trigger: TGGGGCCGCTTGGCAGAGCAGTGTGATCCAGCCCTTGGCAGAGCAAGCATACCAGCTGTGTGACTTGGGTGAGCAACTTGACCTCTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
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| 3UTR CCA 90 bp | GTCCTGTCCAGTGAAACAGCTGCCACGCTGGAAAAAGGTGAAGACTaGAAAAAGGTGCGCTGTGCTGGAATCGCGCTGCCAGAGGCCAGG | + |
|
Preference number: 1 (lower is better) Translates to: VLSSETAATLEKGED*KKVRCAGIALPEAR Trigger: CCTGGCCTCTGGCAGCGCGATTCCAGCACAGCGCACCTTTTTCCAGTCTTCACCTTTTTCCAGCGTGGCAGCTGTTTCACTGGACAGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000099197.9 ENSMUST00000165343.8 |
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| 3UTR CCA 90 bp | CAGGGCTGGAGTGGGGAGTCCAGGGAGTCTGGTCCAAGTACAAGCTaGTCCTGTCCAGTGAAACAGCTGCCACGCTGGAAAAAGGTGAAG | + |
|
Preference number: 1 (lower is better) Translates to: QGWSGESRESGPSTS*SCPVKQLPRWKKVK Trigger: CTTCACCTTTTTCCAGCGTGGCAGCTGTTTCACTGGACAGGACCAGCTTGTACTTGGACCAGACTCCCTGGACTCCCCACTCCAGCCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099197.9 ENSMUST00000165343.8 |
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| 3UTR CCA 90 bp | CTGGTTCAAAGATGCACAGGGCTGGAGTGGGGAGTCCAGGGAGTCTaGTCCAAGTACAAGCTGGTCCTGTCCAGTGAAACAGCTGCCACG | + |
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Preference number: 1 (lower is better) Translates to: LVQRCTGLEWGVQGV*SKYKLVLSSETAAT Trigger: CGTGGCAGCTGTTTCACTGGACAGGACCAGCTTGTACTTGGACCAGACTCCCTGGACTCCCCACTCCAGCCCTGTGCATCTTTGAACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099197.9 ENSMUST00000165343.8 |
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| 3UTR CCA 90 bp | TCCACCGGGAGGTCATCTTTCTGGTCATCAGAACTCCTTGTGTCATaGCTGCCTGAGGGGTTCATGTTGGCTCGAGCAGGCTGCGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: STGRSSFWSSELLVS*LPEGFMLARAGCVS Trigger: GGAGACGCAGCCTGCTCGAGCCAACATGAACCCCTCAGGCAGCCATGACACAAGGAGTTCTGATGACCAGAAAGATGACCTCCCGGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
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| 3UTR TCA 90 bp | GAGGTCATCTTTCTGGTCATCAGAACTCCTTGTGTCATGGCTGCCTaGGGGGTTCATGTTGGCTCGAGCAGGCTGCGTCTCCACACCGGT | + |
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Preference number: 1 (lower is better) Translates to: EVIFLVIRTPCVMAA*GVHVGSSRLRLHTG Trigger: ACCGGTGTGGAGACGCAGCCTGCTCGAGCCAACATGAACCCCTCAGGCAGCCATGACACAAGGAGTTCTGATGACCAGAAAGATGACCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
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| 3UTR TCA 90 bp | TCATTTCTTCTGACTGGGGGTCAGCTAGGGGCTTTCCTCTGCGCTTaGAGGGATCGGAACAGCTGCCTGAGCTGCTCCTTCCGGTCATTG | + |
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Preference number: 1 (lower is better) Translates to: SFLLTGGQLGAFLCA*RDRNSCLSCSFRSL Trigger: CAATGACCGGAAGGAGCAGCTCAGGCAGCTGTTCCGATCCCTTCAAGCGCAGAGGAAAGCCCCTAGCTGACCCCCAGTCAGAAGAAATGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165343.8 |
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| 3UTR TCA 90 bp | CCACACCGGTGGGTTTCTTCCCCGAAGTGCCCTTCCTCCAGTCCATaGTGTCTTTCAGTCTCCGGAAGAGAAATATGCCCTTCCCCTGAG | + |
|
Preference number: 1 (lower is better) Translates to: PHRWVSSPKCPSSSP*CLSVSGREICPSPE Trigger: CTCAGGGGAAGGGCATATTTCTCTTCCGGAGACTGAAAGACATCATGGACTGGAGGAAGGGCACTTCGGGGAAGAAACCCACCGGTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
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| 3UTR GCA 90 bp | AAGAACAGAGAGGTCAAGTTGCTCACCCAAGTCACACAGCTGGTATaGTTGCTCTGCCAAGGGCTGGATCACACTGCTCTGCCAAGCGGC | + |
|
Preference number: 1 (lower is better) Translates to: KNREVKLLTQVTQLV*LLCQGLDHTALPSG Trigger: GCCGCTTGGCAGAGCAGTGTGATCCAGCCCTTGGCAGAGCAAGCATACCAGCTGTGTGACTTGGGTGAGCAACTTGACCTCTCTGTTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
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| 3UTR CCA 90 bp | GGTCCAAGTACAAGCTGGTCCTGTCCAGTGAAACAGCTGCCACGCTaGAAAAAGGTGAAGACTGGAAAAAGGTGCGCTGTGCTGGAATCG | + |
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Preference number: 1 (lower is better) Translates to: GPSTSWSCPVKQLPR*KKVKTGKRCAVLES Trigger: CGATTCCAGCACAGCGCACCTTTTTCCAGTCTTCACCTTTTTCCAGCGTGGCAGCTGTTTCACTGGACAGGACCAGCTTGTACTTGGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000099197.9 ENSMUST00000165343.8 |
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| 3UTR CCA 90 bp | TCTCCCACTCACTTCCTGTCTGGCTCAACGTACCTAGGTGAGTGTTaGTCACAAAGTTCCCCATCCCTGATAGGTCAGAAGGCCCATCCT | + |
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Preference number: 1 (lower is better) Translates to: SPTHFLSGSTYLGEC*SQSSPSLIGQKAHP Trigger: AGGATGGGCCTTCTGACCTATCAGGGATGGGGAACTTTGTGACCAACACTCACCTAGGTACGTTGAGCCAGACAGGAAGTGAGTGGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
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| 3UTR TCA 90 bp | ATGTTTCTCTCCCACTCACTTCCTGTCTGGCTCAACGTACCTAGGTaGGTGTTGGTCACAAAGTTCCCCATCCCTGATAGGTCAGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: MFLSHSLPVWLNVPR*VLVTKFPIPDRSEG Trigger: GCCTTCTGACCTATCAGGGATGGGGAACTTTGTGACCAACACTCACCTAGGTACGTTGAGCCAGACAGGAAGTGAGTGGGAGAGAAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
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| 3UTR CCA 90 bp | GCCTGTGCTTTATTAGATGTGGTATTAGACGTGCTCTCTGAGCAGTaGAACTTGCTGCTTGGCCTCTTTGGGCCCAGTTGCCAATCAGTC | + |
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Preference number: 1 (lower is better) Translates to: ACALLDVVLDVLSEQ*NLLLGLFGPSCQSV Trigger: GACTGATTGGCAACTGGGCCCAAAGAGGCCAAGCAGCAAGTTCCACTGCTCAGAGAGCACGTCTAATACCACATCTAATAAAGCACAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099197.9 ENSMUST00000165343.8 |
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| 3UTR GCA 90 bp | AGCTCAAAGCAGTGCTTATCACTGATGATCACCTTCTGCACGCTCTaGAGGCTCTTGATGAAGATATTGTCCATGTCACTGAAGAGTGTC | + |
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Preference number: 1 (lower is better) Translates to: SSKQCLSLMITFCTL*RLLMKILSMSLKSV Trigger: GACACTCTTCAGTGACATGGACAATATCTTCATCAAGAGCCTGCAGAGCGTGCAGAAGGTGATCATCAGTGATAAGCACTGCTTTGAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109801.9 ENSMUST00000146626.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
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| 3UTR-3UTR GCA 90 bp | GCGCTGTGCTGGAATCGCGCTGCCAGAGGCCAGGGCGGCACCTGCCAGGGCCTCTCAGGCGATGTCTTCTaGACAGCAACATTGGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: ALCWNRAARGQGGTCQGLSGDVF*TATLVR Trigger: CCTCACCAATGTTGCTGTGCAGAAGACATCGCCTGA...GAGGCCCTGGCAGGTGCCGCCCTGGCCTCTGGCAGCGCGATTCCAGCACAGCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165343.8 |
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| 3UTR-3UTR CCA 90 bp | GCGCTGTGCTGGAATCGCGCTGCCAGAGGCCAGGGCGGCACCTGCCAGGGCCTCGGTCCAAGTACAAGCTaGTCCTGTCCAGTGAAACAG | + |
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Preference number: 2 (lower is better) Translates to: ALCWNRAARGQGGTCQGLGPSTS*SCPVKQ Trigger: CTGTTTCACTGGACAGGACCAGCTTGTACTTGGACC...GAGGCCCTGGCAGGTGCCGCCCTGGCCTCTGGCAGCGCGATTCCAGCACAGCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099197.9 ENSMUST00000165343.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCCTGGCCTCCATGTCCACCACGTGCAGGGTATCCTCCAGCAGACAGGTCTTAGTCCTCCTGGCTGCTaGCCGTCAGGGAAGGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: EPGLHVHHVQGILQQTGLSPPGC*PSGKER Trigger: CCTCTCCTTCCCTGACGGCCAGCAGCCAGGAGGACT...AAGACCTGTCTGCTGGAGGATACCCTGCACGTGGTGGACATGGAGGCCAGGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109801.9 ENSMUST00000146626.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
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| 3UTR-3UTR GCA 90 bp | TTCAAAGATGCACAGGGCTGGAGTGGGGAGTCCAGGGAGTCTGGTCCAAGTACAGTGCTGGAATCGCGCTaGCAGAGGCCAGGGCGGCAC | + |
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Preference number: 2 (lower is better) Translates to: FKDAQGWSGESRESGPSTVLESR*QRPGRH Trigger: GTGCCGCCCTGGCCTCTGGCAGCGCGATTCCAGCAC...TGTACTTGGACCAGACTCCCTGGACTCCCCACTCCAGCCCTGTGCATCTTTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099197.9 ENSMUST00000165343.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGCCACGCTGGAAAAAGGTGAAGACTGGAAAAAGGTGCGCTGTGCTGGAATCGTGCTGGAATCGCGCTaGCAGAGGCCAGGGCGGCAC | + |
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Preference number: 2 (lower is better) Translates to: AATLEKGEDWKKVRCAGIVLESR*QRPGRH Trigger: GTGCCGCCCTGGCCTCTGGCAGCGCGATTCCAGCAC...GATTCCAGCACAGCGCACCTTTTTCCAGTCTTCACCTTTTTCCAGCGTGGCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000099197.9 ENSMUST00000165343.8 |
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| 3UTR-3UTR CCA 90 bp | CATGGCTGCCTGAGGGGTTCATGTTGGCTCGAGCAGGCTGCGTCTCCACACCGGCCCAAGTCACACAGCTaGTATGCTTGCTCTGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: HGCLRGSCWLEQAASPHRPKSHS*YACSAK Trigger: CTTGGCAGAGCAAGCATACCAGCTGTGTGACTTGGG...CCGGTGTGGAGACGCAGCCTGCTCGAGCCAACATGAACCCCTCAGGCAGCCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGGATGTACGACATCACCAGCACGTAGACGCGCAGGTCAAACTTGCGGCCGCGTCTCCACACCGGTaGGTTTCTTCCCCGAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: QRDVRHHQHVDAQVKLAAASPHR*VSSPKC Trigger: GCACTTCGGGGAAGAAACCCACCGGTGTGGAGACGC...GGCCGCAAGTTTGACCTGCGCGTCTACGTGCTGGTGATGTCGTACATCCCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
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| 3UTR CAA 90 bp | TGGTCATCAGAACTCCTTGTGTCATGGCTGCCTGAGGGGTTCATGTaGGCTCGAGCAGGCTGCGTCTCCACACCGGTGGGTTTCTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: WSSELLVSWLPEGFM*ARAGCVSTPVGFFP Trigger: GGGGAAGAAACCCACCGGTGTGGAGACGCAGCCTGCTCGAGCCAACATGAACCCCTCAGGCAGCCATGACACAAGGAGTTCTGATGACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAGGCCCATCCTCTCGGCTGACAGGGCCATCATTCCACATGAGATCGAAGCCGCTGGTCCTGTCCAGTaGAACAGCTGCCACGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: RRPILSADRAIIPHEIEAAGPVQ*NSCHAG Trigger: TCCAGCGTGGCAGCTGTTTCACTGGACAGGACCAGC...GGCTTCGATCTCATGTGGAATGATGGCCCTGTCAGCCGAGAGGATGGGCCTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165343.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCGGCTGACAGGGCCATCATTCCACATGAGATCGAAGCCCCCGACTCTCTTCGCCCATCCTCTCGGCTaGCAGGGCCATCATTCCACA | + |
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Preference number: 2 (lower is better) Translates to: SRLTGPSFHMRSKPPTLFAHPLG*QGHHST Trigger: TGTGGAATGATGGCCCTGTCAGCCGAGAGGATGGGC...GAAGAGAGTCGGGGGCTTCGATCTCATGTGGAATGATGGCCCTGTCAGCCGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000109801.9 ENSMUST00000146626.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
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| 3UTR-3UTR TCA 90 bp | CACACAGCTGGTATGCTTGCTCTGCCAAGGGCTGGATCACACTGCTCTGCCAAGGCCCATCCTCTCGGCTaGCAGGGCCATCATTCCACA | + |
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Preference number: 2 (lower is better) Translates to: HTAGMLALPRAGSHCSAKAHPLG*QGHHST Trigger: TGTGGAATGATGGCCCTGTCAGCCGAGAGGATGGGC...CTTGGCAGAGCAGTGTGATCCAGCCCTTGGCAGAGCAAGCATACCAGCTGTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAAAGATGCACAGGGCTGGAGTGGGGAGTCCAGGGAGTCTGGTCCAAGTACATGCACAGGGCTGGAGTaGGGAGTCCAGGGAGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: FKDAQGWSGESRESGPSTCTGLE*GVQGVW Trigger: CCAGACTCCCTGGACTCCCCACTCCAGCCCTGTGCA...TGTACTTGGACCAGACTCCCTGGACTCCCCACTCCAGCCCTGTGCATCTTTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099197.9 ENSMUST00000165343.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTTTCCTGTGAGCCTGGCCTCCATGTCCACCACGTGCAGGGTATCCTCCAGCGCTGCTTGGCCTCTTTaGGCCCAGTTGCCAATCAGT | + |
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Preference number: 2 (lower is better) Translates to: SFPVSLASMSTTCRVSSSAAWPL*AQLPIS Trigger: ACTGATTGGCAACTGGGCCCAAAGAGGCCAAGCAGC...GCTGGAGGATACCCTGCACGTGGTGGACATGGAGGCCAGGCTCACAGGAAAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165343.8 |
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| 3UTR CAA 90 bp | AACAGAGAGGTCAAGTTGCTCACCCAAGTCACACAGCTGGTATGCTaGCTCTGCCAAGGGCTGGATCACACTGCTCTGCCAAGCGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: NREVKLLTQVTQLVC*LCQGLDHTALPSGP Trigger: GGGGCCGCTTGGCAGAGCAGTGTGATCCAGCCCTTGGCAGAGCAAGCATACCAGCTGTGTGACTTGGGTGAGCAACTTGACCTCTCTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
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| 3UTR-3UTR TCA 90 bp | CGGCTGACAGGGCCATCATTCCACATGAGATCGAAGCCCCCGACTCTCTTCTCCAAGCCAGGTACTGCCTaGAGCGCTGAAGCATCCACT | + |
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Preference number: 2 (lower is better) Translates to: RLTGPSFHMRSKPPTLFSKPGTA*SAEAST Trigger: AGTGGATGCTTCAGCGCTTCAGGCAGTACCTGGCTT...GGAGAAGAGAGTCGGGGGCTTCGATCTCATGTGGAATGATGGCCCTGTCAGCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000109801.9 ENSMUST00000146626.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAGGGATGTACGACATCACCAGCACGTAGACGCGCAGGTCAAACTTGCGGCCAAGCCAGGTACTGCCTaGAGCGCTGAAGCATCCACT | + |
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Preference number: 2 (lower is better) Translates to: QRDVRHHQHVDAQVKLAAKPGTA*SAEAST Trigger: AGTGGATGCTTCAGCGCTTCAGGCAGTACCTGGCTT...GGCCGCAAGTTTGACCTGCGCGTCTACGTGCTGGTGATGTCGTACATCCCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
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| 3UTR-3UTR TCA 90 bp | CCACATGAGATCGAAGCCCCCGACTCTCTTCTCCTTTCCTGTGAGCCTGGCCTCAAGCCAGGTACTGCCTaGAGCGCTGAAGCATCCACT | + |
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Preference number: 2 (lower is better) Translates to: PHEIEAPDSLLLSCEPGLKPGTA*SAEAST Trigger: AGTGGATGCTTCAGCGCTTCAGGCAGTACCTGGCTT...GAGGCCAGGCTCACAGGAAAGGAGAAGAGAGTCGGGGGCTTCGATCTCATGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000109801.9 ENSMUST00000146626.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGGTTCAAAGATGCACAGGGCTGGAGTGGGGAGTCCAGGGAGTCTGGTCCAAAAGCCAGGTACTGCCTaGAGCGCTGAAGCATCCACT | + |
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Preference number: 2 (lower is better) Translates to: PGSKMHRAGVGSPGSLVQKPGTA*SAEAST Trigger: AGTGGATGCTTCAGCGCTTCAGGCAGTACCTGGCTT...TTGGACCAGACTCCCTGGACTCCCCACTCCAGCCCTGTGCATCTTTGAACCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165343.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCGGCTGACAGGGCCATCATTCCACATGAGATCGAAGCCCCCGACTCTCTTCGGCCATCATTCCACATaGGATCGAAGCCCCCGACTC | + |
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Preference number: 2 (lower is better) Translates to: SRLTGPSFHMRSKPPTLFGHHST*DRSPRL Trigger: GAGTCGGGGGCTTCGATCTCATGTGGAATGATGGCC...GAAGAGAGTCGGGGGCTTCGATCTCATGTGGAATGATGGCCCTGTCAGCCGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000109801.9 ENSMUST00000146626.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
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| 3UTR-3UTR TCA 90 bp | CACACAGCTGGTATGCTTGCTCTGCCAAGGGCTGGATCACACTGCTCTGCCAAGGGCCATCATTCCACATaGGATCGAAGCCCCCGACTC | + |
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Preference number: 2 (lower is better) Translates to: HTAGMLALPRAGSHCSAKGHHST*DRSPRL Trigger: GAGTCGGGGGCTTCGATCTCATGTGGAATGATGGCC...CTTGGCAGAGCAGTGTGATCCAGCCCTTGGCAGAGCAAGCATACCAGCTGTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGGCCTCCATGTCCACCACGTGCAGGGTATCCTCCAGCAGACAGGTCTTGAGTTCCTGGTTCAAAGATaGACAGGGCTGGAGTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: PGLHVHHVQGILQQTGLEFLVQR*TGLEWG Trigger: TCCCCACTCCAGCCCTGTGCATCTTTGAACCAGGAA...CTCAAGACCTGTCTGCTGGAGGATACCCTGCACGTGGTGGACATGGAGGCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165343.8 |
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| 3UTR CAA 90 bp | CTCATTTCTTCTGACTGGGGGTCAGCTAGGGGCTTTCCTCTGCGCTaGAAGGGATCGGAACAGCTGCCTGAGCTGCTCCTTCCGGTCATT | + |
|
Preference number: 2 (lower is better) Translates to: LISSDWGSARGFPLR*KGSEQLPELLLPVI Trigger: AATGACCGGAAGGAGCAGCTCAGGCAGCTGTTCCGATCCCTTCAAGCGCAGAGGAAAGCCCCTAGCTGACCCCCAGTCAGAAGAAATGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165343.8 |
||
| 3UTR-3UTR TCA 90 bp | GTAGGGGTTTTCCACGTAACGCTGAGCCACGTAGTTCTCCACCGGGAGGTCATCTACTGCCTGAAGCGCTaGAGCATCCACTTGCAACCC | + |
|
Preference number: 2 (lower is better) Translates to: VGVFHVTLSHVVLHREVIYCLKR*SIHLQP Trigger: GGGTTGCAAGTGGATGCTTCAGCGCTTCAGGCAGTA...GATGACCTCCCGGTGGAGAACTACGTGGCTCAGCGTTACGTGGAAAACCCCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
||
| 3UTR-3UTR TCA 90 bp | TCGGCTGACAGGGCCATCATTCCACATGAGATCGAAGCCCCCGACTCTCTTCTCTCTTCTCCTTTCCTGTaGGCCTGGCCTCCATGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: SADRAIIPHEIEAPDSLLSSPFL*AWPPCP Trigger: TGGACATGGAGGCCAGGCTCACAGGAAAGGAGAAGA...GAGAAGAGAGTCGGGGGCTTCGATCTCATGTGGAATGATGGCCCTGTCAGCCGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000109801.9 ENSMUST00000146626.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTATCCTCCAGCAGACAGGTCTTGAGTTCATAGTCCTCCTGGCTGCTGGCCGTTCTTCTCCTTTCCTGTaGGCCTGGCCTCCATGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: GILQQTGLEFIVLLAAGRSSPFL*AWPPCP Trigger: TGGACATGGAGGCCAGGCTCACAGGAAAGGAGAAGA...ACGGCCAGCAGCCAGGAGGACTATGAACTCAAGACCTGTCTGCTGGAGGATACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109801.9 ENSMUST00000146626.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
||
| 3UTR-3UTR TCA 90 bp | GTCACTGAAGAGTGTCTCCACGGCCTTAGGACCATGCTTGGAAGCCAGGTACTGGCTCCTTCCGGTCATTaGCGCAGCCTAGGTGAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: VTEECLHGLRTMLGSQVLAPSGH*RSLGEC Trigger: ACACTCACCTAGGCTGCGTCAATGACCGGAAGGAGC...CAGTACCTGGCTTCCAAGCATGGTCCTAAGGCCGTGGAGACACTCTTCAGTGAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109801.9 ENSMUST00000165343.8 |
||
| 3UTR-3UTR CCA 90 bp | GCCGTCAGGGAAGGAGAGGCATTGACTTCTAGGAGCCACGGCTTGAGGTCCTGGGGTCCAAGTACAAGCTaGTCCTGTCCAGTGAAACAG | + |
|
Preference number: 2 (lower is better) Translates to: AVREGEALTSRSHGLRSWGPSTS*SCPVKQ Trigger: CTGTTTCACTGGACAGGACCAGCTTGTACTTGGACC...CCAGGACCTCAAGCCGTGGCTCCTAGAAGTCAATGCCTCTCCTTCCCTGACGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165343.8 |
||
| 3UTR CAA 90 bp | CGTAGTTCTCCACCGGGAGGTCATCTTTCTGGTCATCAGAACTCCTaGTGTCATGGCTGCCTGAGGGGTTCATGTTGGCTCGAGCAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: RSSPPGGHLSGHQNS*CHGCLRGSCWLEQA Trigger: AGCCTGCTCGAGCCAACATGAACCCCTCAGGCAGCCATGACACAAGGAGTTCTGATGACCAGAAAGATGACCTCCCGGTGGAGAACTACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAGGCCCATCCTCTCGGCTGACAGGGCCATCATTCCACATGAGATCGAAGCCCCACGCTGGAAAAAGGTaGAGACTGGAAAAAGGTGCG | + |
|
Preference number: 2 (lower is better) Translates to: EGPSSRLTGPSFHMRSKPHAGKR*RLEKGA Trigger: CGCACCTTTTTCCAGTCTTCACCTTTTTCCAGCGTG...GGGCTTCGATCTCATGTGGAATGATGGCCCTGTCAGCCGAGAGGATGGGCCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000165343.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAAAGCCATCACGGTACAGCCATGCCCGCAGAGGGATGTACGACATCACCAGCTATTGTCCATGTCACTaGAGAGTGTCTCCACGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: AKPSRYSHARRGMYDITSYCPCH*RVSPRP Trigger: AGGCCGTGGAGACACTCTTCAGTGACATGGACAATA...GCTGGTGATGTCGTACATCCCTCTGCGGGCATGGCTGTACCGTGATGGCTTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAGCTGCCACGCTGGAAAAAGGTGAAGACTGGAAAAAGGTGCGCTGTGCTGGAGGGAAGGAGAGGCATTaGCTTCTAGGAGCCACGGCT | + |
|
Preference number: 2 (lower is better) Translates to: TAATLEKGEDWKKVRCAGGKERH*LLGATA Trigger: AGCCGTGGCTCCTAGAAGTCAATGCCTCTCCTTCCC...TCCAGCACAGCGCACCTTTTTCCAGTCTTCACCTTTTTCCAGCGTGGCAGCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165343.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTCGGCTGACAGGGCCATCATTCCACATGAGATCGAAGCCCCCGACTCTCTTCCCTTCCTCCAGTCCATaGTGTCTTTCAGTCTCCGGA | + |
|
Preference number: 2 (lower is better) Translates to: SRLTGPSFHMRSKPPTLFPSSSP*CLSVSG Trigger: TCCGGAGACTGAAAGACATCATGGACTGGAGGAAGG...GAAGAGAGTCGGGGGCTTCGATCTCATGTGGAATGATGGCCCTGTCAGCCGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
||
| 3UTR-3UTR GCA 90 bp | GGAGTCTGGTCCAAGTACAAGCTGGTCCTGTCCAGTGAAACAGCTGCCACGCTGTTCCTGGTTCAAAGATaGACAGGGCTGGAGTGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: GVWSKYKLVLSSETAATLFLVQR*TGLEWG Trigger: TCCCCACTCCAGCCCTGTGCATCTTTGAACCAGGAA...CAGCGTGGCAGCTGTTTCACTGGACAGGACCAGCTTGTACTTGGACCAGACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099197.9 ENSMUST00000165343.8 |
||
| 3UTR-3UTR GCA 90 bp | TCGGCTGACAGGGCCATCATTCCACATGAGATCGAAGCCCCCGACTCTCTTCTCTCCGGAAGAGAAATATaGCCTTCCCCTGAGATCGGG | + |
|
Preference number: 2 (lower is better) Translates to: SADRAIIPHEIEAPDSLLSGREI*PSPEIG Trigger: CCCGATCTCAGGGGAAGGGCATATTTCTCTTCCGGA...GAGAAGAGAGTCGGGGGCTTCGATCTCATGTGGAATGATGGCCCTGTCAGCCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCCTCCAGCAGACAGGTCTTGAGTTCATAGTCCTCCTGGCTGCTGGCCGTCAGTCCTTGTGTCATGGCTaGCTGAGGGGTTCATGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: ILQQTGLEFIVLLAAGRQSLCHG*LRGSCW Trigger: CCAACATGAACCCCTCAGGCAGCCATGACACAAGGA...CTGACGGCCAGCAGCCAGGAGGACTATGAACTCAAGACCTGTCTGCTGGAGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTATCCTCCAGCAGACAGGTCTTGAGTTCATAGTCCTCCTGGCTGCTGGCCGTGGGTGTTGGAGAACCTaGCAAAGCCATCACGGTACA | + |
|
Preference number: 2 (lower is better) Translates to: GILQQTGLEFIVLLAAGRGCWRT*QSHHGT Trigger: TGTACCGTGATGGCTTTGCCAGGTTCTCCAACACCC...ACGGCCAGCAGCCAGGAGGACTATGAACTCAAGACCTGTCTGCTGGAGGATACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
||
| 3UTR-3UTR TCA 90 bp | TCGGCTGACAGGGCCATCATTCCACATGAGATCGAAGCCCCCGACTCTCTTCTCTATTGTCCATGTCACTaGAGAGTGTCTCCACGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: SADRAIIPHEIEAPDSLLYCPCH*RVSPRP Trigger: AGGCCGTGGAGACACTCTTCAGTGACATGGACAATA...GAGAAGAGAGTCGGGGGCTTCGATCTCATGTGGAATGATGGCCCTGTCAGCCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000109801.9 ENSMUST00000146626.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAAAGTTCCCCATCCCTGATAGGTCAGAAGGCCCATCCTCTCGGCTGACAGGGTATTGTCCATGTCACTaGAGAGTGTCTCCACGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: TKFPIPDRSEGPSSRLTGYCPCH*RVSPRP Trigger: AGGCCGTGGAGACACTCTTCAGTGACATGGACAATA...CCCTGTCAGCCGAGAGGATGGGCCTTCTGACCTATCAGGGATGGGGAACTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000109801.9 ENSMUST00000146626.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
||
| 3UTR-3UTR TCA 90 bp | ATCATTCCACATGAGATCGAAGCCCCCGACTCTCTTCTCCTTTCCTGTGAGCCTGGGAAGGAGAGGCATTaGCTTCTAGGAGCCACGGCT | + |
|
Preference number: 2 (lower is better) Translates to: IIPHEIEAPDSLLLSCEPGKERH*LLGATA Trigger: AGCCGTGGCTCCTAGAAGTCAATGCCTCTCCTTCCC...AGGCTCACAGGAAAGGAGAAGAGAGTCGGGGGCTTCGATCTCATGTGGAATGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000109801.9 ENSMUST00000146626.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
||
| 3UTR-3UTR CCA 90 bp | TCGGGTGTTGGAGAACCTGGCAAAGCCATCACGGTACAGCCATGCCCGCAGAGGGAAAAAGGTGAAGACTaGAAAAAGGTGCGCTGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: SGVGEPGKAITVQPCPQREKGED*KKVRCA Trigger: AGCACAGCGCACCTTTTTCCAGTCTTCACCTTTTTC...CCTCTGCGGGCATGGCTGTACCGTGATGGCTTTGCCAGGTTCTCCAACACCCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165343.8 |
||
| 3UTR-3UTR CCA 90 bp | TCATTCCACATGAGATCGAAGCCCCCGACTCTCTTCTCCTTTCCTGTGAGCCTGGTGGAACTTGCTGCTTaGCCTCTTTGGGCCCAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: SFHMRSKPPTLFSFPVSLVELAA*PLWAQL Trigger: CAACTGGGCCCAAAGAGGCCAAGCAGCAAGTTCCAC...CAGGCTCACAGGAAAGGAGAAGAGAGTCGGGGGCTTCGATCTCATGTGGAATGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165343.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTCGGCTGACAGGGCCATCATTCCACATGAGATCGAAGCCCCCGACTCTCTTCAGCCTAGGTGAGTGTTaGTCACAAAGTTCCCCATCC | + |
|
Preference number: 2 (lower is better) Translates to: SRLTGPSFHMRSKPPTLFSLGEC*SQSSPS Trigger: GGATGGGGAACTTTGTGACCAACACTCACCTAGGCT...GAAGAGAGTCGGGGGCTTCGATCTCATGTGGAATGATGGCCCTGTCAGCCGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109801.9 ENSMUST00000165343.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGCAGACAGGTCTTGAGTTCATAGTCCTCCTGGCTGCTGGCCGTCAGGGAAGGGGGAGGTCATCTTTCTaGTCATCAGAACTCCTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: QQTGLEFIVLLAAGRQGRGRSSF*SSELLV Trigger: CACAAGGAGTTCTGATGACCAGAAAGATGACCTCCC...CCTTCCCTGACGGCCAGCAGCCAGGAGGACTATGAACTCAAGACCTGTCTGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
||
| 3UTR CAA 90 bp | CCCAGTTGCCAATCAGTCAAGGATAAGCCCACCCAGTTCCAAAGATaGGCTGTTCCTGGTTCAAAGATGCACAGGGCTGGAGTGGGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: PSCQSVKDKPTQFQR*AVPGSKMHRAGVGS Trigger: ACTCCCCACTCCAGCCCTGTGCATCTTTGAACCAGGAACAGCCAATCTTTGGAACTGGGTGGGCTTATCCTTGACTGATTGGCAACTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099197.9 ENSMUST00000165343.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGGTCACAAAGTTCCCCATCCCTGATAGGTCAGAAGGCCCATCCTCTCGGCTGTATTGTCCATGTCACTaGAGAGTGTCTCCACGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: LVTKFPIPDRSEGPSSRLYCPCH*RVSPRP Trigger: AGGCCGTGGAGACACTCTTCAGTGACATGGACAATA...CAGCCGAGAGGATGGGCCTTCTGACCTATCAGGGATGGGGAACTTTGTGACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000109801.9 ENSMUST00000146626.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
||
| 3UTR-3UTR TCA 90 bp | GTAGTCAGGCGATGTCTTCTGCACAGCAACATTGGTGAGGTGAACATAGTGGTCGCTCCTTCCGGTCATTaGCGCAGCCTAGGTGAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: VVRRCLLHSNIGEVNIVVAPSGH*RSLGEC Trigger: ACACTCACCTAGGCTGCGTCAATGACCGGAAGGAGC...GACCACTATGTTCACCTCACCAATGTTGCTGTGCAGAAGACATCGCCTGACTAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165343.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAGAGAGGTCAAGTTGCTCACCCAAGTCACACAGCTGGTATGCTTGCTCTGCCCCTTCCTCCAGTCCATaGTGTCTTTCAGTCTCCGGA | + |
|
Preference number: 2 (lower is better) Translates to: TERSSCSPKSHSWYACSAPSSSP*CLSVSG Trigger: TCCGGAGACTGAAAGACATCATGGACTGGAGGAAGG...GGCAGAGCAAGCATACCAGCTGTGTGACTTGGGTGAGCAACTTGACCTCTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGGCATTGACTTCTAGGAGCCACGGCTTGAGGTCCTGGTCAATGAGGATGTCACTGATGATCACCTTCTaGACGCTCTGCAGGCTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: EALTSRSHGLRSWSMRMSLMITF*TLCRLL Trigger: CAAGAGCCTGCAGAGCGTGCAGAAGGTGATCATCAG...TGACATCCTCATTGACCAGGACCTCAAGCCGTGGCTCCTAGAAGTCAATGCCTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109801.9 ENSMUST00000146626.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
||
| 3UTR-3UTR CCA 90 bp | TCATTCCACATGAGATCGAAGCCCCCGACTCTCTTCTCCTTTCCTGTGAGCCTGCCCAAGTCACACAGCTaGTATGCTTGCTCTGCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: SFHMRSKPPTLFSFPVSLPKSHS*YACSAK Trigger: CTTGGCAGAGCAAGCATACCAGCTGTGTGACTTGGG...CAGGCTCACAGGAAAGGAGAAGAGAGTCGGGGGCTTCGATCTCATGTGGAATGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
||
| 3UTR-3UTR CCA 90 bp | GATTGGCTGTTCCTGGTTCAAAGATGCACAGGGCTGGAGTGGGGAGTCCAGGGAAAACAGCTGCCACGCTaGAAAAAGGTGAAGACTGGA | + |
|
Preference number: 2 (lower is better) Translates to: DWLFLVQRCTGLEWGVQGKQLPR*KKVKTG Trigger: TCCAGTCTTCACCTTTTTCCAGCGTGGCAGCTGTTT...TCCCTGGACTCCCCACTCCAGCCCTGTGCATCTTTGAACCAGGAACAGCCAATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099197.9 ENSMUST00000165343.8 |
||
| 3UTR-3UTR CCA 90 bp | CGCTTGAAGGGATCGGAACAGCTGCCTGAGCTGCTCCTTCCGGTCATTGACGCACCCAGTTCCAAAGATTaGCTGTTCCTGGTTCAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: RLKGSEQLPELLLPVIDAPSSKD*LFLVQR Trigger: TCTTTGAACCAGGAACAGCCAATCTTTGGAACTGGG...TGCGTCAATGACCGGAAGGAGCAGCTCAGGCAGCTGTTCCGATCCCTTCAAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165343.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGGGATGTACGACATCACCAGCACGTAGACGCGCAGGTCAAACTTGCGGCCGCATCTCAAAGGTTTTaGGGAAGAAGTCACACTTGG | + |
|
Preference number: 2 (lower is better) Translates to: QRDVRHHQHVDAQVKLAAASQRF*GRSHTW Trigger: CCAAGTGTGACTTCTTCCCCAAAACCTTTGAGATGC...GGCCGCAAGTTTGACCTGCGCGTCTACGTGCTGGTGATGTCGTACATCCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152158.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCACGCTCTGCAGGCTCTTGATGAAGATATTGTCCATGTCACTGAAGAGTGTCGGGAAGGAGAGGCATTaGCTTCTAGGAGCCACGGCT | + |
|
Preference number: 2 (lower is better) Translates to: CTLCRLLMKILSMSLKSVGKERH*LLGATA Trigger: AGCCGTGGCTCCTAGAAGTCAATGCCTCTCCTTCCC...GACACTCTTCAGTGACATGGACAATATCTTCATCAAGAGCCTGCAGAGCGTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109801.9 ENSMUST00000146626.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAGCTGCCACGCTGGAAAAAGGTGAAGACTGGAAAAAGGTGCGCTGTGCTGGACGATGCTATTCAGTGTaGATCGGGTGTTGGAGAACC | + |
|
Preference number: 2 (lower is better) Translates to: TAATLEKGEDWKKVRCAGRCYSV*IGCWRT Trigger: GGTTCTCCAACACCCGATTCACACTGAATAGCATCG...TCCAGCACAGCGCACCTTTTTCCAGTCTTCACCTTTTTCCAGCGTGGCAGCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165343.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGTCTGGTCCAAGTACAAGCTGGTCCTGTCCAGTGAAACAGCTGCCACGCTGGGAAAAAGGTGAAGACTaGAAAAAGGTGCGCTGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: ESGPSTSWSCPVKQLPRWEKGED*KKVRCA Trigger: AGCACAGCGCACCTTTTTCCAGTCTTCACCTTTTTC...CCAGCGTGGCAGCTGTTTCACTGGACAGGACCAGCTTGTACTTGGACCAGACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000099197.9 ENSMUST00000165343.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAGCAGTGCTTATCACTGATGATCACCTTCTGCACGCTCTGCAGGCTCTTGATTACTGCCTGAAGCGCTaGAGCATCCACTTGCAACCC | + |
|
Preference number: 2 (lower is better) Translates to: KAVLITDDHLLHALQALDYCLKR*SIHLQP Trigger: GGGTTGCAAGTGGATGCTTCAGCGCTTCAGGCAGTA...ATCAAGAGCCTGCAGAGCGTGCAGAAGGTGATCATCAGTGATAAGCACTGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109801.9 ENSMUST00000146626.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
||
| 3UTR-3UTR GCA 90 bp | GTAGTCAGGCGATGTCTTCTGCACAGCAACATTGGTGAGGTGAACATAGTGGTCTCCGGAAGAGAAATATaGCCTTCCCCTGAGATCGGG | + |
|
Preference number: 2 (lower is better) Translates to: VVRRCLLHSNIGEVNIVVSGREI*PSPEIG Trigger: CCCGATCTCAGGGGAAGGGCATATTTCTCTTCCGGA...GACCACTATGTTCACCTCACCAATGTTGCTGTGCAGAAGACATCGCCTGACTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGAGAGGTCAAGTTGCTCACCCAAGTCACACAGCTGGTATGCTTGCTCTGCCTACCTAGGTGAGTGTTaGTCACAAAGTTCCCCATCC | + |
|
Preference number: 2 (lower is better) Translates to: TERSSCSPKSHSWYACSAYLGEC*SQSSPS Trigger: GGATGGGGAACTTTGTGACCAACACTCACCTAGGTA...GGCAGAGCAAGCATACCAGCTGTGTGACTTGGGTGAGCAACTTGACCTCTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
||
| 3UTR CAA 90 bp | CAGTGCTTATCACTGATGATCACCTTCTGCACGCTCTGCAGGCTCTaGATGAAGATATTGTCCATGTCACTGAAGAGTGTCTCCACGGCC | + |
|
Preference number: 2 (lower is better) Translates to: QCLSLMITFCTLCRL*MKILSMSLKSVSTA Trigger: GGCCGTGGAGACACTCTTCAGTGACATGGACAATATCTTCATCAAGAGCCTGCAGAGCGTGCAGAAGGTGATCATCAGTGATAAGCACTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109801.9 ENSMUST00000146626.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTGGCTCAACGTACCTAGGTGAGTGTTGGTCACAAAGTTCCCCATCCCTGATACGATGCTATTCAGTGTaGATCGGGTGTTGGAGAACC | + |
|
Preference number: 2 (lower is better) Translates to: SGSTYLGECWSQSSPSLIRCYSV*IGCWRT Trigger: GGTTCTCCAACACCCGATTCACACTGAATAGCATCG...TATCAGGGATGGGGAACTTTGTGACCAACACTCACCTAGGTACGTTGAGCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTCTGCACAGCAACATTGGTGAGGTGAACATAGTGGTCATCGATGCTATTCAGCGATGCTATTCAGTGTaGATCGGGTGTTGGAGAACC | + |
|
Preference number: 2 (lower is better) Translates to: LLHSNIGEVNIVVIDAIQRCYSV*IGCWRT Trigger: GGTTCTCCAACACCCGATTCACACTGAATAGCATCG...CTGAATAGCATCGATGACCACTATGTTCACCTCACCAATGTTGCTGTGCAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAGAGAGGTCAAGTTGCTCACCCAAGTCACACAGCTGGTATGCTTGCTCTGCCTCTTTATGTTATGGATaGAGAACAGAGAGGTCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: TERSSCSPKSHSWYACSASLCYG*RTERSS Trigger: ACTTGACCTCTCTGTTCTTCATCCATAACATAAAGA...GGCAGAGCAAGCATACCAGCTGTGTGACTTGGGTGAGCAACTTGACCTCTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
||
| 3UTR GCA 72 bp | AAGACTGGAAAAAGGTGCGCTGTGCTGGAATCGCGCTaGCAGAGGCCAGGGCGGCACCTGCCAGGGCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: KTGKRCAVLESR*QRPGRHLPGPH Trigger: ATGAGGCCCTGGCAGGTGCCGCCCTGGCCTCTGGCAGCGCGATTCCAGCACAGCGCACCTTTTTCCAGTCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099197.9 ENSMUST00000165343.8 |
||
| 3UTR GCA 72 bp | TGGCTGCCTGAGGGGTTCATGTTGGCTCGAGCAGGCTaGGTCTCCACACCGGTGGGTTTCTTCCCCGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: WLPEGFMLARAG*VSTPVGFFPEV Trigger: CACTTCGGGGAAGAAACCCACCGGTGTGGAGACGCAGCCTGCTCGAGCCAACATGAACCCCTCAGGCAGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
||
| 3UTR CCA 72 bp | CAGGGCGGCACCTGCCAGGGCCTCATTTCTTCTGACTaGGGGTCAGCTAGGGGCTTTCCTCTGCGCTTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: QGGTCQGLISSD*GSARGFPLRLK Trigger: CTTCAAGCGCAGAGGAAAGCCCCTAGCTGACCCCCAGTCAGAAGAAATGAGGCCCTGGCAGGTGCCGCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165343.8 |
||
| 3UTR TCA 72 bp | CCACCACGTGCAGGGTATCCTCCAGCAGACAGGTCTTaGGTTCATAGTCCTCCTGGCTGCTGGCCGTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: PPRAGYPPADRS*VHSPPGCWPSG Trigger: CCCTGACGGCCAGCAGCCAGGAGGACTATGAACTCAAGACCTGTCTGCTGGAGGATACCCTGCACGTGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109801.9 ENSMUST00000146626.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
||
| 3UTR TCA 72 bp | CTGACTGGGGGTCAGCTAGGGGCTTTCCTCTGCGCTTaGAGGGATCGGAACAGCTGCCTGAGCTGCTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LTGGQLGAFLCA*RDRNSCLSCSF Trigger: GAAGGAGCAGCTCAGGCAGCTGTTCCGATCCCTTCAAGCGCAGAGGAAAGCCCCTAGCTGACCCCCAGTCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165343.8 |
||
| 3UTR CCA 72 bp | TCATGTTGGCTCGAGCAGGCTGCGTCTCCACACCGGTaGGTTTCTTCCCCGAAGTGCCCTTCCTCCAGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SCWLEQAASPHR*VSSPKCPSSSP Trigger: TGGACTGGAGGAAGGGCACTTCGGGGAAGAAACCCACCGGTGTGGAGACGCAGCCTGCTCGAGCCAACATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
||
| 3UTR GCA 72 bp | CTGCCACGCTGGAAAAAGGTGAAGACTGGAAAAAGGTaGGCTGTGCTGGAATCGCGCTGCCAGAGGCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LPRWKKVKTGKR*AVLESRCQRPG Trigger: CCCTGGCCTCTGGCAGCGCGATTCCAGCACAGCGCACCTTTTTCCAGTCTTCACCTTTTTCCAGCGTGGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000099197.9 ENSMUST00000165343.8 |
||
| 3UTR CCA 72 bp | AACTCCTTGTGTCATGGCTGCCTGAGGGGTTCATGTTaGCTCGAGCAGGCTGCGTCTCCACACCGGTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: NSLCHGCLRGSC*LEQAASPHRWV Trigger: AACCCACCGGTGTGGAGACGCAGCCTGCTCGAGCCAACATGAACCCCTCAGGCAGCCATGACACAAGGAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGCCTGGCCTCCATGTCCACCACGTGCAGGGTATCCTCCAGCAGACAGGTCTTGGTCATCAGAACTCCTaGTGTCATGGCTGCCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: EPGLHVHHVQGILQQTGLGHQNS*CHGCLR Trigger: CCTCAGGCAGCCATGACACAAGGAGTTCTGATGACC...AAGACCTGTCTGCTGGAGGATACCCTGCACGTGGTGGACATGGAGGCCAGGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAAAGTTCCCCATCCCTGATAGGTCAGAAGGCCCATCCTCTCGGCTGACAGGGAGGGAAGGAGAGGCATaGACTTCTAGGAGCCACGGC | + |
|
Preference number: 3 (lower is better) Translates to: TKFPIPDRSEGPSSRLTGREGEA*TSRSHG Trigger: GCCGTGGCTCCTAGAAGTCAATGCCTCTCCTTCCCT...CCCTGTCAGCCGAGAGGATGGGCCTTCTGACCTATCAGGGATGGGGAACTTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000109801.9 ENSMUST00000146626.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
||
| 3UTR GCA 72 bp | TTGCTCACCCAAGTCACACAGCTGGTATGCTTGCTCTaGCAAGGGCTGGATCACACTGCTCTGCCAAGCGGC | + |
|
Preference number: 3 (lower is better) Translates to: LLTQVTQLVCLL*QGLDHTALPSG Trigger: GCCGCTTGGCAGAGCAGTGTGATCCAGCCCTTGGCAGAGCAAGCATACCAGCTGTGTGACTTGGGTGAGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGCCATCATTCCACATGAGATCGAAGCCCCCGACTCTCTTCTCCTTTCCTGTGAGGGAAGGAGAGGCATaGACTTCTAGGAGCCACGGC | + |
|
Preference number: 3 (lower is better) Translates to: GPSFHMRSKPPTLFSFPVREGEA*TSRSHG Trigger: GCCGTGGCTCCTAGAAGTCAATGCCTCTCCTTCCCT...CACAGGAAAGGAGAAGAGAGTCGGGGGCTTCGATCTCATGTGGAATGATGGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000109801.9 ENSMUST00000146626.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCCTCCAGCAGACAGGTCTTGAGTTCATAGTCCTCCTGGCTGCTGGCCGTCAGGGTCATCAGAACTCCTaGTGTCATGGCTGCCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: ILQQTGLEFIVLLAAGRQGHQNS*CHGCLR Trigger: CCTCAGGCAGCCATGACACAAGGAGTTCTGATGACC...CTGACGGCCAGCAGCCAGGAGGACTATGAACTCAAGACCTGTCTGCTGGAGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
||
| 3UTR GCA 72 bp | CCCAGTTCCAAAGATTGGCTGTTCCTGGTTCAAAGATaGACAGGGCTGGAGTGGGGAGTCCAGGGAGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PSSKDWLFLVQR*TGLEWGVQGVW Trigger: CCAGACTCCCTGGACTCCCCACTCCAGCCCTGTGCATCTTTGAACCAGGAACAGCCAATCTTTGGAACTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099197.9 ENSMUST00000165343.8 |
||
| 3UTR GCA 72 bp | GTTGGAGAACCTGGCAAAGCCATCACGGTACAGCCATaGCCGCAGAGGGATGTACGACATCACCAGCACGTA | + |
|
Preference number: 3 (lower is better) Translates to: VGEPGKAITVQP*PQRDVRHHQHV Trigger: TACGTGCTGGTGATGTCGTACATCCCTCTGCGGGCATGGCTGTACCGTGATGGCTTTGCCAGGTTCTCCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
||
| 3UTR CCA 72 bp | AGTGGGGAGTCCAGGGAGTCTGGTCCAAGTACAAGCTaGTCCTGTCCAGTGAAACAGCTGCCACGCTGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SGESRESGPSTS*SCPVKQLPRWK Trigger: TTTCCAGCGTGGCAGCTGTTTCACTGGACAGGACCAGCTTGTACTTGGACCAGACTCCCTGGACTCCCCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099197.9 ENSMUST00000165343.8 |
||
| 3UTR CCA 72 bp | TGGCTGTTCCTGGTTCAAAGATGCACAGGGCTGGAGTaGGGAGTCCAGGGAGTCTGGTCCAAGTACAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: WLFLVQRCTGLE*GVQGVWSKYKL Trigger: CAGCTTGTACTTGGACCAGACTCCCTGGACTCCCCACTCCAGCCCTGTGCATCTTTGAACCAGGAACAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099197.9 ENSMUST00000165343.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGCCACGCTGGAAAAAGGTGAAGACTGGAAAAAGGTGCGCTGTGCTGGAATCTGCTGCTTGGCCTCTTaGGGCCCAGTTGCCAATCAG | + |
|
Preference number: 3 (lower is better) Translates to: AATLEKGEDWKKVRCAGICCLAS*GPVANQ Trigger: CTGATTGGCAACTGGGCCCAAAGAGGCCAAGCAGCA...GATTCCAGCACAGCGCACCTTTTTCCAGTCTTCACCTTTTTCCAGCGTGGCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000099197.9 ENSMUST00000165343.8 |
||
| 3UTR GCA 72 bp | ATCGGGCGACCTCGTAGTGGTTCCGGAAGTGGCTTATaGGCACGTGCTCATCCATGTAGGTGTGGTCAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: IGRPRSGSGSGL*ARAHPCRCGQS Trigger: ACTTTGACCACACCTACATGGATGAGCACGTGCGCATAAGCCACTTCCGGAACCACTACGAGGTCGCCCGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146626.9 |
||
| 3UTR GCA 72 bp | CATCTTTCTGGTCATCAGAACTCCTTGTGTCATGGCTaGCTGAGGGGTTCATGTTGGCTCGAGCAGGCTGCG | + |
|
Preference number: 3 (lower is better) Translates to: HLSGHQNSLCHG*LRGSCWLEQAA Trigger: CGCAGCCTGCTCGAGCCAACATGAACCCCTCAGGCAGCCATGACACAAGGAGTTCTGATGACCAGAAAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTGGAGAACCTGGCAAAGCCATCACGGTACAGCCATGCCCGCAGAGGGATGTAAACAGAGAGGTCAAGTaGCTCACCCAAGTCACACAG | + |
|
Preference number: 3 (lower is better) Translates to: VGEPGKAITVQPCPQRDVNREVK*LTQVTQ Trigger: CTGTGTGACTTGGGTGAGCAACTTGACCTCTCTGTT...TACATCCCTCTGCGGGCATGGCTGTACCGTGATGGCTTTGCCAGGTTCTCCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGTGAAACAGCTGCCACGCTGGAAAAAGGTGAAGACTGGAAAAAGGTGCGCTCTAGGAGCCACGGCTaGAGGTCCTGGTCAATGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSETAATLEKGEDWKKVRSRSHG*RSWSMR Trigger: CCTCATTGACCAGGACCTCAAGCCGTGGCTCCTAGA...GCGCACCTTTTTCCAGTCTTCACCTTTTTCCAGCGTGGCAGCTGTTTCACTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165343.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTCACAAAGTTCCCCATCCCTGATAGGTCAGAAGGCCCATCCTCTCGGCTGAGTGTGAATCGGGTGTaGGAGAACCTGGCAAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LVTKFPIPDRSEGPSSRLSVNRV*ENLAKP Trigger: TGGCTTTGCCAGGTTCTCCAACACCCGATTCACACT...CAGCCGAGAGGATGGGCCTTCTGACCTATCAGGGATGGGGAACTTTGTGACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
||
| 3UTR GCA 72 bp | TCAAGTTGCTCACCCAAGTCACACAGCTGGTATGCTTaGTCTGCCAAGGGCTGGATCACACTGCTCTGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SSCSPKSHSWYA*SAKGWITLLCQ Trigger: TTGGCAGAGCAGTGTGATCCAGCCCTTGGCAGAGCAAGCATACCAGCTGTGTGACTTGGGTGAGCAACTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
||
| 3UTR CCA 72 bp | AGTGAAACAGCTGCCACGCTGGAAAAAGGTGAAGACTaGAAAAAGGTGCGCTGTGCTGGAATCGCGCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SETAATLEKGED*KKVRCAGIALP Trigger: TGGCAGCGCGATTCCAGCACAGCGCACCTTTTTCCAGTCTTCACCTTTTTCCAGCGTGGCAGCTGTTTCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000099197.9 ENSMUST00000165343.8 |
||
| 3UTR CCA 72 bp | AAGATTGGCTGTTCCTGGTTCAAAGATGCACAGGGCTaGAGTGGGGAGTCCAGGGAGTCTGGTCCAAGTACA | + |
|
Preference number: 3 (lower is better) Translates to: KIGCSWFKDAQG*SGESRESGPST Trigger: TGTACTTGGACCAGACTCCCTGGACTCCCCACTCCAGCCCTGTGCATCTTTGAACCAGGAACAGCCAATCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099197.9 ENSMUST00000165343.8 |
||
| 3UTR CCA 72 bp | AGGTCATCTTTCTGGTCATCAGAACTCCTTGTGTCATaGCTGCCTGAGGGGTTCATGTTGGCTCGAGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: RSSFWSSELLVS*LPEGFMLARAG Trigger: GCCTGCTCGAGCCAACATGAACCCCTCAGGCAGCCATGACACAAGGAGTTCTGATGACCAGAAAGATGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
||
| 3UTR-3UTR CAA 90 bp | AACCTGGCAAAGCCATCACGGTACAGCCATGCCCGCAGAGGGATGTACGACATCGGCATCTCAAAGGTTTaGGGGAAGAAGTCACACTTG | + |
|
Preference number: 3 (lower is better) Translates to: NLAKPSRYSHARRGMYDIGISKV*GKKSHL Trigger: CAAGTGTGACTTCTTCCCCAAAACCTTTGAGATGCC...GATGTCGTACATCCCTCTGCGGGCATGGCTGTACCGTGATGGCTTTGCCAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152158.8 |
||
| 3UTR TCA 72 bp | TCTTTCAGTCTCCGGAAGAGAAATATGCCCTTCCCCTaGGATCGGGCGACAGGCTTCATGATCCAGGTGATC | + |
|
Preference number: 3 (lower is better) Translates to: SFSLRKRNMPFP*DRATGFMIQVI Trigger: GATCACCTGGATCATGAAGCCTGTCGCCCGATCTCAGGGGAAGGGCATATTTCTCTTCCGGAGACTGAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152158.8 |
||
| 3UTR GCA 72 bp | ACGACATCACCAGCACGTAGACGCGCAGGTCAAACTTaGGGCCTCCTATTAAGTAGGGGTTTTCCACGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: TTSPARRRAGQT*GLLLSRGFPRN Trigger: GTTACGTGGAAAACCCCTACTTAATAGGAGGCCGCAAGTTTGACCTGCGCGTCTACGTGCTGGTGATGTCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCACGCTCTGCAGGCTCTTGATGAAGATATTGTCCATGTCACTGAAGAGTGTCGGGAAGAAGTCACACTaGGCTGCCTCCGTCTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: CTLCRLLMKILSMSLKSVGKKSH*AASVFP Trigger: AGGAAAGACGGAGGCAGCCAAGTGTGACTTCTTCCC...GACACTCTTCAGTGACATGGACAATATCTTCATCAAGAGCCTGCAGAGCGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152158.8 |
||
| 3UTR TCA 72 bp | TGGGTTTCTTCCCCGAAGTGCCCTTCCTCCAGTCCATaGTGTCTTTCAGTCTCCGGAAGAGAAATATGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: WVSSPKCPSSSP*CLSVSGREICP Trigger: AGGGCATATTTCTCTTCCGGAGACTGAAAGACATCATGGACTGGAGGAAGGGCACTTCGGGGAAGAAACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
||
| 3UTR CCA 72 bp | CACTTCCTGTCTGGCTCAACGTACCTAGGTGAGTGTTaGTCACAAAGTTCCCCATCCCTGATAGGTCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: HFLSGSTYLGEC*SQSSPSLIGQK Trigger: CTTCTGACCTATCAGGGATGGGGAACTTTGTGACCAACACTCACCTAGGTACGTTGAGCCAGACAGGAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
||
| 3UTR-3UTR CAA 90 bp | GTAGTCAGGCGATGTCTTCTGCACAGCAACATTGGTGAGGTGAACATAGTGGTCAACAGAGAGGTCAAGTaGCTCACCCAAGTCACACAG | + |
|
Preference number: 3 (lower is better) Translates to: VVRRCLLHSNIGEVNIVVNREVK*LTQVTQ Trigger: CTGTGTGACTTGGGTGAGCAACTTGACCTCTCTGTT...GACCACTATGTTCACCTCACCAATGTTGCTGTGCAGAAGACATCGCCTGACTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
||
| 3UTR CCA 72 bp | TTATTAGATGTGGTATTAGACGTGCTCTCTGAGCAGTaGAACTTGCTGCTTGGCCTCTTTGGGCCCAGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: LLDVVLDVLSEQ*NLLLGLFGPSC Trigger: GCAACTGGGCCCAAAGAGGCCAAGCAGCAAGTTCCACTGCTCAGAGAGCACGTCTAATACCACATCTAATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099197.9 ENSMUST00000165343.8 |
||
| 3UTR TCA 72 bp | GGTAGTCAGGCGATGTCTTCTGCACAGCAACATTGGTaGGGTGAACATAGTGGTCATCGATGCTATTCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: GSQAMSSAQQHW*GEHSGHRCYSV Trigger: CACTGAATAGCATCGATGACCACTATGTTCACCTCACCAATGTTGCTGTGCAGAAGACATCGCCTGACTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGCATTGACTTCTAGGAGCCACGGCTTGAGGTCCTGGTCAATGAGGATGTCACTCTTGATGAAGATATaGTCCATGTCACTGAAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: EALTSRSHGLRSWSMRMSLLMKI*SMSLKS Trigger: ACTCTTCAGTGACATGGACAATATCTTCATCAAGAG...TGACATCCTCATTGACCAGGACCTCAAGCCGTGGCTCCTAGAAGTCAATGCCTC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109801.9 ENSMUST00000146626.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCAGGCTCTTGATGAAGATATTGTCCATGTCACTGAAGAGTGTCTCCACGGCCTCTTGATGAAGATATaGTCCATGTCACTGAAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: LQALDEDIVHVTEECLHGLLMKI*SMSLKS Trigger: ACTCTTCAGTGACATGGACAATATCTTCATCAAGAG...GCCGTGGAGACACTCTTCAGTGACATGGACAATATCTTCATCAAGAGCCTGCAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109801.9 ENSMUST00000146626.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
||
| 3UTR TCA 72 bp | ACACCTGTAAGATACTACTCATCTTTATGTTATGGATaGAGAACAGAGAGGTCAAGTTGCTCACCCAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: TPVRYYSSLCYG*RTERSSCSPKS Trigger: TGACTTGGGTGAGCAACTTGACCTCTCTGTTCTTCATCCATAACATAAAGATGAGTAGTATCTTACAGGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
||
| CDS-3UTR TCA 90 bp | GCGCTGTGCTGGAATCGCGCTGCCAGAGGCCAGGGCGGCACCTGCCAGGGCCTCGGCCATCATTCCACATaGGATCGAAGCCCCCGACTC | + |
|
Preference number: 4 (lower is better) Translates to: ALCWNRAARGQGGTCQGLGHHST*DRSPRL Trigger: GAGTCGGGGGCTTCGATCTCATGTGGAATGATGGCC...GAGGCCCTGGCAGGTGCCGCCCTGGCCTCTGGCAGCGCGATTCCAGCACAGCGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR CCA 90 bp | AGGTGCGCTGTGCTGGAATCGCGCTGCCAGAGGCCAGGGCGGCACCTGCCAGGGGCGTCTCCACACCGGTaGGTTTCTTCCCCGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RCAVLESRCQRPGRHLPGASPHR*VSSPKC Trigger: GCACTTCGGGGAAGAAACCCACCGGTGTGGAGACGC...CCCTGGCAGGTGCCGCCCTGGCCTCTGGCAGCGCGATTCCAGCACAGCGCACCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR TCA 90 bp | AGGTGCGCTGTGCTGGAATCGCGCTGCCAGAGGCCAGGGCGGCACCTGCCAGGGGCTCCTTCCGGTCATTaGCGCAGCCTAGGTGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RCAVLESRCQRPGRHLPGAPSGH*RSLGEC Trigger: ACACTCACCTAGGCTGCGTCAATGACCGGAAGGAGC...CCCTGGCAGGTGCCGCCCTGGCCTCTGGCAGCGCGATTCCAGCACAGCGCACCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR CCA 90 bp | GCGCTGTGCTGGAATCGCGCTGCCAGAGGCCAGGGCGGCACCTGCCAGGGCCTCGGGTGTTGGAGAACCTaGCAAAGCCATCACGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: ALCWNRAARGQGGTCQGLGCWRT*QSHHGT Trigger: TGTACCGTGATGGCTTTGCCAGGTTCTCCAACACCC...GAGGCCCTGGCAGGTGCCGCCCTGGCCTCTGGCAGCGCGATTCCAGCACAGCGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR TCA 90 bp | GGTGCGCTGTGCTGGAATCGCGCTGCCAGAGGCCAGGGCGGCACCTGCCAGGGCCGATGCTATTCAGTGTaGATCGGGTGTTGGAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: GALCWNRAARGQGGTCQGRCYSV*IGCWRT Trigger: GGTTCTCCAACACCCGATTCACACTGAATAGCATCG...GCCCTGGCAGGTGCCGCCCTGGCCTCTGGCAGCGCGATTCCAGCACAGCGCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR TCA 90 bp | CCTGATAGGTCAGAAGGCCCATCCTCTCGGCTGACAGGGCCATCATTCCACATGGGGGAGGGCAGACGGTaGCCCCTCCGTGCCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PDRSEGPSSRLTGPSFHMGEGRR*PLRALP Trigger: AGGCAGGGCACGGAGGGGTCACCGTCTGCCCTCCCC...CATGTGGAATGATGGCCCTGTCAGCCGAGAGGATGGGCCTTCTGACCTATCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152158.8 |
||
| CDS-3UTR TCA 90 bp | GTGCTGGAATCGCGCTGCCAGAGGCCAGGGCGGCACCTGCCAGGGCCTCATTTCCCTTCCTCCAGTCCATaGTGTCTTTCAGTCTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLESRCQRPGRHLPGPHFPSSSP*CLSVSG Trigger: TCCGGAGACTGAAAGACATCATGGACTGGAGGAAGG...GAAATGAGGCCCTGGCAGGTGCCGCCCTGGCCTCTGGCAGCGCGATTCCAGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR CCA 90 bp | AGGTGCGCTGTGCTGGAATCGCGCTGCCAGAGGCCAGGGCGGCACCTGCCAGGGGCATCTCAAAGGTTTTaGGGAAGAAGTCACACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RCAVLESRCQRPGRHLPGASQRF*GRSHTW Trigger: CCAAGTGTGACTTCTTCCCCAAAACCTTTGAGATGC...CCCTGGCAGGTGCCGCCCTGGCCTCTGGCAGCGCGATTCCAGCACAGCGCACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| 3UTR CAA 72 bp | GAACTCCTTGTGTCATGGCTGCCTGAGGGGTTCATGTaGGCTCGAGCAGGCTGCGTCTCCACACCGGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ELLVSWLPEGFM*ARAGCVSTPVG Trigger: ACCCACCGGTGTGGAGACGCAGCCTGCTCGAGCCAACATGAACCCCTCAGGCAGCCATGACACAAGGAGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146626.9 ENSMUST00000152158.8 |
||
| 3UTR CAA 72 bp | TCTGACTGGGGGTCAGCTAGGGGCTTTCCTCTGCGCTaGAAGGGATCGGAACAGCTGCCTGAGCTGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SDWGSARGFPLR*KGSEQLPELLL Trigger: AAGGAGCAGCTCAGGCAGCTGTTCCGATCCCTTCAAGCGCAGAGGAAAGCCCCTAGCTGACCCCCAGTCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165343.8 |
||
| CDS-3UTR TCA 90 bp | GGTTCAAAGATGCACAGGGCTGGAGTGGGGAGTCCAGGGAGTCTGGTCCAAGTAGCCCATCCTCTCGGCTaGCAGGGCCATCATTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GSKMHRAGVGSPGSLVQVAHPLG*QGHHST Trigger: TGTGGAATGATGGCCCTGTCAGCCGAGAGGATGGGC...TACTTGGACCAGACTCCCTGGACTCCCCACTCCAGCCCTGTGCATCTTTGAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR TCA 90 bp | TCTCGGCTGACAGGGCCATCATTCCACATGAGATCGAAGCCCCCGACTCTCTTCTGCCTCCGTCTTTCCTaGCTCACGCTCCAGGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: SRLTGPSFHMRSKPPTLFCLRLS*LTLQVL Trigger: AAGTACCTGGAGCGTGAGTCAGGAAAGACGGAGGCA...GAAGAGAGTCGGGGGCTTCGATCTCATGTGGAATGATGGCCCTGTCAGCCGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109801.9 |
||
| CDS-3UTR TCA 90 bp | GGTTCAAAGATGCACAGGGCTGGAGTGGGGAGTCCAGGGAGTCTGGTCCAAGTATACTGCCTGAAGCGCTaGAGCATCCACTTGCAACCC | + |
|
Preference number: 4 (lower is better) Translates to: GSKMHRAGVGSPGSLVQVYCLKR*SIHLQP Trigger: GGGTTGCAAGTGGATGCTTCAGCGCTTCAGGCAGTA...TACTTGGACCAGACTCCCTGGACTCCCCACTCCAGCCCTGTGCATCTTTGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR TCA 90 bp | CCTGGCCTCCATGTCCACCACGTGCAGGGTATCCTCCAGCAGACAGGTCTTGAGGCAACATTGGTGAGGTaGACATCGACATCACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGLHVHHVQGILQQTGLEATLVR*TSTSPA Trigger: TGCTGGTGATGTCGATGTTCACCTCACCAATGTTGC...CTCAAGACCTGTCTGCTGGAGGATACCCTGCACGTGGTGGACATGGAGGCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109801.9 |
||
| CDS-3UTR GCA 90 bp | CTCCTTTCCTGTGAGCCTGGCCTCCATGTCCACCACGTGCAGGGTATCCTCCAGTCAGGCGATGTCTTCTaGACAGCAACATTGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLSCEPGLHVHHVQGILQSGDVF*TATLVR Trigger: CCTCACCAATGTTGCTGTGCAGAAGACATCGCCTGA...CTGGAGGATACCCTGCACGTGGTGGACATGGAGGCCAGGCTCACAGGAAAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109801.9 |
||
| CDS-3UTR CCA 90 bp | GAGAGGTCAAGTTGCTCACCCAAGTCACACAGCTGGTATGCTTGCTCTGCCAAGGCGTCTCCACACCGGTaGGTTTCTTCCCCGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ERSSCSPKSHSWYACSAKASPHR*VSSPKC Trigger: GCACTTCGGGGAAGAAACCCACCGGTGTGGAGACGC...CTTGGCAGAGCAAGCATACCAGCTGTGTGACTTGGGTGAGCAACTTGACCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
||
| CDS-3UTR CCA 90 bp | GTGAAACAGCTGCCACGCTGGAAAAAGGTGAAGACTGGAAAAAGGTGCGCTGTGAGTCCTCCTGGCTGCTaGCCGTCAGGGAAGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VKQLPRWKKVKTGKRCAVSPPGC*PSGKER Trigger: CCTCTCCTTCCCTGACGGCCAGCAGCCAGGAGGACT...CACAGCGCACCTTTTTCCAGTCTTCACCTTTTTCCAGCGTGGCAGCTGTTTCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR TCA 90 bp | CCAAGTACAAGCTGGTCCTGTCCAGTGAAACAGCTGCCACGCTGGAAAAAGGTGGGGAAGGAGAGGCATTaGCTTCTAGGAGCCACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSTSWSCPVKQLPRWKKVGKERH*LLGATA Trigger: AGCCGTGGCTCCTAGAAGTCAATGCCTCTCCTTCCC...CACCTTTTTCCAGCGTGGCAGCTGTTTCACTGGACAGGACCAGCTTGTACTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR TCA 90 bp | CCACGCTGGAAAAAGGTGAAGACTGGAAAAAGGTGCGCTGTGCTGGAATCGCGCTCTTCTCCTTTCCTGTaGGCCTGGCCTCCATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PRWKKVKTGKRCAVLESRSSPFL*AWPPCP Trigger: TGGACATGGAGGCCAGGCTCACAGGAAAGGAGAAGA...GCGCGATTCCAGCACAGCGCACCTTTTTCCAGTCTTCACCTTTTTCCAGCGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR GCA 90 bp | TCCAGTGAAACAGCTGCCACGCTGGAAAAAGGTGAAGACTGGAAAAAGGTGCGCAGGGATCGGAACAGCTaGCTGAGCTGCTCCTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SSETAATLEKGEDWKKVRRDRNS*LSCSFR Trigger: CCGGAAGGAGCAGCTCAGGCAGCTGTTCCGATCCCT...GCGCACCTTTTTCCAGTCTTCACCTTTTTCCAGCGTGGCAGCTGTTTCACTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR GCA 90 bp | CCGACTCTCTTCTCCTTTCCTGTGAGCCTGGCCTCCATGTCCACCACGTGCAGGCGGATTAAGGTTCTCTaGTCTCTTCTGTCGCGACAT | + |
|
Preference number: 4 (lower is better) Translates to: PTLFSFPVSLASMSTTCRRIKVL*SLLSRH Trigger: ATGTCGCGACAGAAGAGAGCAGAGAACCTTAATCCG...CCTGCACGTGGTGGACATGGAGGCCAGGCTCACAGGAAAGGAGAAGAGAGTCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146626.9 |
||
| CDS-3UTR CCA 90 bp | AGAACAGAGAGGTCAAGTTGCTCACCCAAGTCACACAGCTGGTATGCTTGCTCTAGTCCTCCTGGCTGCTaGCCGTCAGGGAAGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RTERSSCSPKSHSWYACSSPPGC*PSGKER Trigger: CCTCTCCTTCCCTGACGGCCAGCAGCCAGGAGGACT...AGAGCAAGCATACCAGCTGTGTGACTTGGGTGAGCAACTTGACCTCTCTGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
||
| CDS-3UTR CCA 90 bp | CCTGGTTCAAAGATGCACAGGGCTGGAGTGGGGAGTCCAGGGAGTCTGGTCCAAAGCCTAGGTGAGTGTTaGTCACAAAGTTCCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PGSKMHRAGVGSPGSLVQSLGEC*SQSSPS Trigger: GGATGGGGAACTTTGTGACCAACACTCACCTAGGCT...TTGGACCAGACTCCCTGGACTCCCCACTCCAGCCCTGTGCATCTTTGAACCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR TCA 90 bp | GCTGCCACGCTGGAAAAAGGTGAAGACTGGAAAAAGGTGCGCTGTGCTGGAATCTGCCTCCGTCTTTCCTaGCTCACGCTCCAGGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: AATLEKGEDWKKVRCAGICLRLS*LTLQVL Trigger: AAGTACCTGGAGCGTGAGTCAGGAAAGACGGAGGCA...GATTCCAGCACAGCGCACCTTTTTCCAGTCTTCACCTTTTTCCAGCGTGGCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR TCA 90 bp | GGTTCAAAGATGCACAGGGCTGGAGTGGGGAGTCCAGGGAGTCTGGTCCAAGTATATTGTCCATGTCACTaGAGAGTGTCTCCACGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSKMHRAGVGSPGSLVQVYCPCH*RVSPRP Trigger: AGGCCGTGGAGACACTCTTCAGTGACATGGACAATA...TACTTGGACCAGACTCCCTGGACTCCCCACTCCAGCCCTGTGCATCTTTGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR TCA 90 bp | AGAGAGGTCAAGTTGCTCACCCAAGTCACACAGCTGGTATGCTTGCTCTGCCAAGGGAAGGAGAGGCATTaGCTTCTAGGAGCCACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: REVKLLTQVTQLVCLLCQGKERH*LLGATA Trigger: AGCCGTGGCTCCTAGAAGTCAATGCCTCTCCTTCCC...TTGGCAGAGCAAGCATACCAGCTGTGTGACTTGGGTGAGCAACTTGACCTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
||
| CDS-3UTR GCA 90 bp | CGCTGGAAAAAGGTGAAGACTGGAAAAAGGTGCGCTGTGCTGGAATCGCGCTGCTCCGGAAGTGGCTTATaGGCACGTGCTCATCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: RWKKVKTGKRCAVLESRCSGSGL*ARAHPC Trigger: ACATGGATGAGCACGTGCGCATAAGCCACTTCCGGA...GCAGCGCGATTCCAGCACAGCGCACCTTTTTCCAGTCTTCACCTTTTTCCAGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR GCA 90 bp | GCCACGCTGGAAAAAGGTGAAGACTGGAAAAAGGTGCGCTGTGCTGGAATCGCGTCCGGAAGAGAAATATaGCCTTCCCCTGAGATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ATLEKGEDWKKVRCAGIASGREI*PSPEIG Trigger: CCCGATCTCAGGGGAAGGGCATATTTCTCTTCCGGA...CGCGATTCCAGCACAGCGCACCTTTTTCCAGTCTTCACCTTTTTCCAGCGTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR GCA 90 bp | GTCACTGAAGAGTGTCTCCACGGCCTTAGGACCATGCTTGGAAGCCAGGTACTGTCCGGAAGAGAAATATaGCCTTCCCCTGAGATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: VTEECLHGLRTMLGSQVLSGREI*PSPEIG Trigger: CCCGATCTCAGGGGAAGGGCATATTTCTCTTCCGGA...CAGTACCTGGCTTCCAAGCATGGTCCTAAGGCCGTGGAGACACTCTTCAGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109801.9 |
||
| CDS-3UTR CCA 90 bp | TATGCTTGCTCTGCCAAGGGCTGGATCACACTGCTCTGCCAAGCGGCCCCAGCCACACTCCATGGCCCTTaGAATTTTGATTCTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YACSAKGWITLLCQAAPATLHGP*NFDSSV Trigger: GACAGAAGAATCAAAATTCCAAGGGCCATGGAGTGT...GGCTGGGGCCGCTTGGCAGAGCAGTGTGATCCAGCCCTTGGCAGAGCAAGCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152158.8 |
||
| CDS-3UTR CCA 90 bp | CCACATGAGATCGAAGCCCCCGACTCTCTTCTCCTTTCCTGTGAGCCTGGCCTCGGGAGGTCATCTTTCTaGTCATCAGAACTCCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PHEIEAPDSLLLSCEPGLGRSSF*SSELLV Trigger: CACAAGGAGTTCTGATGACCAGAAAGATGACCTCCC...GAGGCCAGGCTCACAGGAAAGGAGAAGAGAGTCGGGGGCTTCGATCTCATGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109801.9 ENSMUST00000165343.8 |
||
| 3UTR CAA 72 bp | TGCTCTCTGAGCAGTGGAACTTGCTGCTTGGCCTCTTaGGGCCCAGTTGCCAATCAGTCAAGGATAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CSLSSGTCCLAS*GPVANQSRISP Trigger: TGGGCTTATCCTTGACTGATTGGCAACTGGGCCCAAAGAGGCCAAGCAGCAAGTTCCACTGCTCAGAGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099197.9 ENSMUST00000165343.8 |
||
| CDS-3UTR GCA 90 bp | GAGAGGTCAAGTTGCTCACCCAAGTCACACAGCTGGTATGCTTGCTCTGCCAAGTCCGGAAGTGGCTTATaGGCACGTGCTCATCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: ERSSCSPKSHSWYACSAKSGSGL*ARAHPC Trigger: ACATGGATGAGCACGTGCGCATAAGCCACTTCCGGA...CTTGGCAGAGCAAGCATACCAGCTGTGTGACTTGGGTGAGCAACTTGACCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103155.10 ENSMUST00000152158.8 |
||
| CDS-3UTR GCA 90 bp | GGTCCAAGTACAAGCTGGTCCTGTCCAGTGAAACAGCTGCCACGCTGGAAAAAGTCCTTGTGTCATGGCTaGCTGAGGGGTTCATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GPSTSWSCPVKQLPRWKKSLCHG*LRGSCW Trigger: CCAACATGAACCCCTCAGGCAGCCATGACACAAGGA...CTTTTTCCAGCGTGGCAGCTGTTTCACTGGACAGGACCAGCTTGTACTTGGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR GCA 90 bp | CAGCTGCCACGCTGGAAAAAGGTGAAGACTGGAAAAAGGTGCGCTGTGCTGGAACTGATGATCACCTTCTaGACGCTCTGCAGGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QLPRWKKVKTGKRCAVLELMITF*TLCRLL Trigger: CAAGAGCCTGCAGAGCGTGCAGAAGGTGATCATCAG...TTCCAGCACAGCGCACCTTTTTCCAGTCTTCACCTTTTTCCAGCGTGGCAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR TCA 90 bp | ACAGAGAGGTCAAGTTGCTCACCCAAGTCACACAGCTGGTATGCTTGCTCTGCCCGATGCTATTCAGTGTaGATCGGGTGTTGGAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: TERSSCSPKSHSWYACSARCYSV*IGCWRT Trigger: GGTTCTCCAACACCCGATTCACACTGAATAGCATCG...GGCAGAGCAAGCATACCAGCTGTGTGACTTGGGTGAGCAACTTGACCTCTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
||
| CDS-3UTR TCA 90 bp | CTGTCCAGTGAAACAGCTGCCACGCTGGAAAAAGGTGAAGACTGGAAAAAGGTGAAGCCAGGTACTGCCTaGAGCGCTGAAGCATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LSSETAATLEKGEDWKKVKPGTA*SAEAST Trigger: AGTGGATGCTTCAGCGCTTCAGGCAGTACCTGGCTT...CACCTTTTTCCAGTCTTCACCTTTTTCCAGCGTGGCAGCTGTTTCACTGGACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR TCA 90 bp | AGAACAGAGAGGTCAAGTTGCTCACCCAAGTCACACAGCTGGTATGCTTGCTCTAAGCCAGGTACTGCCTaGAGCGCTGAAGCATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: RTERSSCSPKSHSWYACSKPGTA*SAEAST Trigger: AGTGGATGCTTCAGCGCTTCAGGCAGTACCTGGCTT...AGAGCAAGCATACCAGCTGTGTGACTTGGGTGAGCAACTTGACCTCTCTGTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
||
| CDS-3UTR TCA 90 bp | TGGATGAAGAACAGAGAGGTCAAGTTGCTCACCCAAGTCACACAGCTGGTATGCTCTTCTCCTTTCCTGTaGGCCTGGCCTCCATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WMKNREVKLLTQVTQLVCSSPFL*AWPPCP Trigger: TGGACATGGAGGCCAGGCTCACAGGAAAGGAGAAGA...GCATACCAGCTGTGTGACTTGGGTGAGCAACTTGACCTCTCTGTTCTTCATCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
||
| CDS-3UTR TCA 90 bp | AGTTGCCAATCAGTCAAGGATAAGCCCACCCAGTTCCAAAGATTGGCTGTTCCTCTCCTTGTGTCTCTTTaGCTTCCACCCATCCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SCQSVKDKPTQFQRLAVPLLVSL*LPPIRA Trigger: GGCCCGGATGGGTGGAAGTCAAAGAGACACAAGGAG...AGGAACAGCCAATCTTTGGAACTGGGTGGGCTTATCCTTGACTGATTGGCAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165343.8 |
||
| CDS-3UTR GCA 90 bp | CCTCCAGTCCATGATGTCTTTCAGTCTCCGGAAGAGAAATATGCCCTTCCCCTGTCCGGAAGTGGCTTATaGGCACGTGCTCATCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: PPVHDVFQSPEEKYALPLSGSGL*ARAHPC Trigger: ACATGGATGAGCACGTGCGCATAAGCCACTTCCGGA...CAGGGGAAGGGCATATTTCTCTTCCGGAGACTGAAAGACATCATGGACTGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152158.8 |
||
| CDS-3UTR GCA 90 bp | CAGCTGCCACGCTGGAAAAAGGTGAAGACTGGAAAAAGGTGCGCTGTGCTGGAATCAGGCGATGTCTTCTaGACAGCAACATTGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLPRWKKVKTGKRCAVLESGDVF*TATLVR Trigger: CCTCACCAATGTTGCTGTGCAGAAGACATCGCCTGA...TTCCAGCACAGCGCACCTTTTTCCAGTCTTCACCTTTTTCCAGCGTGGCAGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR CCA 90 bp | AAGATTGGCTGTTCCTGGTTCAAAGATGCACAGGGCTGGAGTGGGGAGTCCAGGGGGAGGTCATCTTTCTaGTCATCAGAACTCCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KIGCSWFKDAQGWSGESRGRSSF*SSELLV Trigger: CACAAGGAGTTCTGATGACCAGAAAGATGACCTCCC...CCTGGACTCCCCACTCCAGCCCTGTGCATCTTTGAACCAGGAACAGCCAATCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099197.9 ENSMUST00000165343.8 |
||
| CDS-3UTR TCA 90 bp | AAGAACAGAGAGGTCAAGTTGCTCACCCAAGTCACACAGCTGGTATGCTTGCTCCCTTCCTCCAGTCCATaGTGTCTTTCAGTCTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: KNREVKLLTQVTQLVCLLPSSSP*CLSVSG Trigger: TCCGGAGACTGAAAGACATCATGGACTGGAGGAAGG...GAGCAAGCATACCAGCTGTGTGACTTGGGTGAGCAACTTGACCTCTCTGTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
||
| CDS-3UTR GCA 90 bp | AAAGATGCACAGGGCTGGAGTGGGGAGTCCAGGGAGTCTGGTCCAAGTACAAGCCGGATTAAGGTTCTCTaGTCTCTCTCTTTTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KDAQGWSGESRESGPSTSRIKVL*SLSFPF Trigger: GAAAGGAAAAGAGAGAGAGCAGAGAACCTTAATCCG...GCTTGTACTTGGACCAGACTCCCTGGACTCCCCACTCCAGCCCTGTGCATCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099197.9 ENSMUST00000165343.8 |
||
| CDS-3UTR CCA 90 bp | GGTTCAAAGATGCACAGGGCTGGAGTGGGGAGTCCAGGGAGTCTGGTCCAAGTAACACTCCATGGCCCTTaGAATTTTGATTCTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GSKMHRAGVGSPGSLVQVTLHGP*NFDSSV Trigger: GACAGAAGAATCAAAATTCCAAGGGCCATGGAGTGT...TACTTGGACCAGACTCCCTGGACTCCCCACTCCAGCCCTGTGCATCTTTGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR TCA 90 bp | TTTATGTTATGGATGAAGAACAGAGAGGTCAAGTTGCTCACCCAAGTCACACAGGCCCATCCTCTCGGCTaGCAGGGCCATCATTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: FMLWMKNREVKLLTQVTQAHPLG*QGHHST Trigger: TGTGGAATGATGGCCCTGTCAGCCGAGAGGATGGGC...CTGTGTGACTTGGGTGAGCAACTTGACCTCTCTGTTCTTCATCCATAACATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
||
| CDS-3UTR GCA 90 bp | GTCACAAAGTTCCCCATCCCTGATAGGTCAGAAGGCCCATCCTCTCGGCTGACACGGATTAAGGTTCTCTaGTCTCTCTCTTTTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VTKFPIPDRSEGPSSRLTRIKVL*SLSFPF Trigger: GAAAGGAAAAGAGAGAGAGCAGAGAACCTTAATCCG...TGTCAGCCGAGAGGATGGGCCTTCTGACCTATCAGGGATGGGGAACTTTGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109801.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCAGTGCTTATCACTGATGATCACCTTCTGCACGCTCTGCAGGCTCTTGATTCCGGAAGTGGCTTATaGGCACGTGCTCATCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: KAVLITDDHLLHALQALDSGSGL*ARAHPC Trigger: ACATGGATGAGCACGTGCGCATAAGCCACTTCCGGA...ATCAAGAGCCTGCAGAGCGTGCAGAAGGTGATCATCAGTGATAAGCACTGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109801.9 ENSMUST00000152158.8 |
||
| CDS-3UTR GCA 90 bp | AAGAACAGAGAGGTCAAGTTGCTCACCCAAGTCACACAGCTGGTATGCTTGCTCTCAGGCGATGTCTTCTaGACAGCAACATTGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KNREVKLLTQVTQLVCLLSGDVF*TATLVR Trigger: CCTCACCAATGTTGCTGTGCAGAAGACATCGCCTGA...GAGCAAGCATACCAGCTGTGTGACTTGGGTGAGCAACTTGACCTCTCTGTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
||
| CDS-3UTR CCA 90 bp | TTCCAAAGATTGGCTGTTCCTGGTTCAAAGATGCACAGGGCTGGAGTGGGGAGTGGGAGGTCATCTTTCTaGTCATCAGAACTCCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FQRLAVPGSKMHRAGVGSGRSSF*SSELLV Trigger: CACAAGGAGTTCTGATGACCAGAAAGATGACCTCCC...ACTCCCCACTCCAGCCCTGTGCATCTTTGAACCAGGAACAGCCAATCTTTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099197.9 ENSMUST00000165343.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAGGTCAAGTTGCTCACCCAAGTCACACAGCTGGTATGCTTGCTCTGCCAATACCTAGGTGAGTGTTaGTCACAAAGTTCCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: REVKLLTQVTQLVCLLCQYLGEC*SQSSPS Trigger: GGATGGGGAACTTTGTGACCAACACTCACCTAGGTA...TTGGCAGAGCAAGCATACCAGCTGTGTGACTTGGGTGAGCAACTTGACCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
||
| 3UTR CAA 72 bp | CAATCAGTCAAGGATAAGCCCACCCAGTTCCAAAGATaGGCTGTTCCTGGTTCAAAGATGCACAGGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QSVKDKPTQFQR*AVPGSKMHRAG Trigger: TCCAGCCCTGTGCATCTTTGAACCAGGAACAGCCAATCTTTGGAACTGGGTGGGCTTATCCTTGACTGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099197.9 ENSMUST00000165343.8 |
||
| CDS-3UTR TCA 90 bp | CTCATCTTTATGTTATGGATGAAGAACAGAGAGGTCAAGTTGCTCACCCAAGTCGGCCATCATTCCACATaGGATCGAAGCCCCCGACTC | + |
|
Preference number: 4 (lower is better) Translates to: LIFMLWMKNREVKLLTQVGHHST*DRSPRL Trigger: GAGTCGGGGGCTTCGATCTCATGTGGAATGATGGCC...GACTTGGGTGAGCAACTTGACCTCTCTGTTCTTCATCCATAACATAAAGATGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
||
| CDS-3UTR GCA 90 bp | ACAGCTGCCACGCTGGAAAAAGGTGAAGACTGGAAAAAGGTGCGCTGTGCTGGACGGATTAAGGTTCTCTaGTCTCTCTCTTTTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TAATLEKGEDWKKVRCAGRIKVL*SLSFPF Trigger: GAAAGGAAAAGAGAGAGAGCAGAGAACCTTAATCCG...TCCAGCACAGCGCACCTTTTTCCAGTCTTCACCTTTTTCCAGCGTGGCAGCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000099197.9 ENSMUST00000165343.8 |
||
| CDS-3UTR GCA 90 bp | TTATGGATGAAGAACAGAGAGGTCAAGTTGCTCACCCAAGTCACACAGCTGGTATCCTTGTGTCATGGCTaGCTGAGGGGTTCATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LWMKNREVKLLTQVTQLVSLCHG*LRGSCW Trigger: CCAACATGAACCCCTCAGGCAGCCATGACACAAGGA...TACCAGCTGTGTGACTTGGGTGAGCAACTTGACCTCTCTGTTCTTCATCCATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
||
| CDS-3UTR CCA 90 bp | TCATTCCACATGAGATCGAAGCCCCCGACTCTCTTCTCCTTTCCTGTGAGCCTGACACTCCATGGCCCTTaGAATTTTGATTCTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFHMRSKPPTLFSFPVSLTLHGP*NFDSSV Trigger: GACAGAAGAATCAAAATTCCAAGGGCCATGGAGTGT...CAGGCTCACAGGAAAGGAGAAGAGAGTCGGGGGCTTCGATCTCATGTGGAATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109801.9 ENSMUST00000152158.8 |
||
| CDS-3UTR CCA 90 bp | TTATGGATGAAGAACAGAGAGGTCAAGTTGCTCACCCAAGTCACACAGCTGGTAGGGTGTTGGAGAACCTaGCAAAGCCATCACGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: LWMKNREVKLLTQVTQLVGCWRT*QSHHGT Trigger: TGTACCGTGATGGCTTTGCCAGGTTCTCCAACACCC...TACCAGCTGTGTGACTTGGGTGAGCAACTTGACCTCTCTGTTCTTCATCCATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
||
| 3UTR CAA 72 bp | ACAAACAGATGGTACTCACAGGGCATCTCAAAGGTTTaGGGGAAGAAGTCACACTTGGCTGCCTCCGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TNRWYSQGISKV*GKKSHLAASVF Trigger: AAAGACGGAGGCAGCCAAGTGTGACTTCTTCCCCAAAACCTTTGAGATGCCCTGTGAGTACCATCTGTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152158.8 |
||
| CDS-3UTR TCA 90 bp | TTTATGTTATGGATGAAGAACAGAGAGGTCAAGTTGCTCACCCAAGTCACACAGTACTGCCTGAAGCGCTaGAGCATCCACTTGCAACCC | + |
|
Preference number: 4 (lower is better) Translates to: FMLWMKNREVKLLTQVTQYCLKR*SIHLQP Trigger: GGGTTGCAAGTGGATGCTTCAGCGCTTCAGGCAGTA...CTGTGTGACTTGGGTGAGCAACTTGACCTCTCTGTTCTTCATCCATAACATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
||
| CDS-3UTR GCA 90 bp | CTAGGTGAGTGTTGGTCACAAAGTTCCCCATCCCTGATAGGTCAGAAGGCCCATCGGATTAAGGTTCTCTaGTCTCTCTCTTTTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGECWSQSSPSLIGQKAHRIKVL*SLSFPF Trigger: GAAAGGAAAAGAGAGAGAGCAGAGAACCTTAATCCG...ATGGGCCTTCTGACCTATCAGGGATGGGGAACTTTGTGACCAACACTCACCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109801.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAGGTCAAGTTGCTCACCCAAGTCACACAGCTGGTATGCTTGCTCTGCCAAACACTCCATGGCCCTTaGAATTTTGATTCTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: REVKLLTQVTQLVCLLCQTLHGP*NFDSSV Trigger: GACAGAAGAATCAAAATTCCAAGGGCCATGGAGTGT...TTGGCAGAGCAAGCATACCAGCTGTGTGACTTGGGTGAGCAACTTGACCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103155.10 ENSMUST00000152158.8 |
||
| CDS-3UTR CCA 90 bp | ATGAAGAACAGAGAGGTCAAGTTGCTCACCCAAGTCACACAGCTGGTATGCTTGGGGAGGTCATCTTTCTaGTCATCAGAACTCCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: MKNREVKLLTQVTQLVCLGRSSF*SSELLV Trigger: CACAAGGAGTTCTGATGACCAGAAAGATGACCTCCC...CAAGCATACCAGCTGTGTGACTTGGGTGAGCAACTTGACCTCTCTGTTCTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
||
| CDS-3UTR GCA 90 bp | CATCTTTATGTTATGGATGAAGAACAGAGAGGTCAAGTTGCTCACCCAAGTCACCTGATGATCACCTTCTaGACGCTCTGCAGGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HLYVMDEEQRGQVAHPSHLMITF*TLCRLL Trigger: CAAGAGCCTGCAGAGCGTGCAGAAGGTGATCATCAG...GTGACTTGGGTGAGCAACTTGACCTCTCTGTTCTTCATCCATAACATAAAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
||
| 3UTR CAA 72 bp | TCACTGATGATCACCTTCTGCACGCTCTGCAGGCTCTaGATGAAGATATTGTCCATGTCACTGAAGAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLMITFCTLCRL*MKILSMSLKSV Trigger: GACACTCTTCAGTGACATGGACAATATCTTCATCAAGAGCCTGCAGAGCGTGCAGAAGGTGATCATCAGTGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109801.9 ENSMUST00000146626.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
||
| CDS-3UTR TCA 90 bp | GTTGGACATGACACCTGTAAGATACTACTCATCTTTATGTTATGGATGAAGAACTGCCTCCGTCTTTCCTaGCTCACGCTCCAGGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: VGHDTCKILLIFMLWMKNCLRLS*LTLQVL Trigger: AAGTACCTGGAGCGTGAGTCAGGAAAGACGGAGGCA...GTTCTTCATCCATAACATAAAGATGAGTAGTATCTTACAGGTGTCATGTCCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
||
| CDS-3UTR GCA 90 bp | ATACTACTCATCTTTATGTTATGGATGAAGAACAGAGAGGTCAAGTTGCTCACCTCCGGAAGAGAAATATaGCCTTCCCCTGAGATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILLIFMLWMKNREVKLLTSGREI*PSPEIG Trigger: CCCGATCTCAGGGGAAGGGCATATTTCTCTTCCGGA...GGTGAGCAACTTGACCTCTCTGTTCTTCATCCATAACATAAAGATGAGTAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
||
| 3UTR CAA 72 bp | ATCTTTATGTTATGGATGAAGAACAGAGAGGTCAAGTaGCTCACCCAAGTCACACAGCTGGTATGCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IFMLWMKNREVK*LTQVTQLVCLL Trigger: GAGCAAGCATACCAGCTGTGTGACTTGGGTGAGCAACTTGACCTCTCTGTTCTTCATCCATAACATAAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
||
| CDS-3UTR TCA 90 bp | ATACTACTCATCTTTATGTTATGGATGAAGAACAGAGAGGTCAAGTTGCTCACCTATTGTCCATGTCACTaGAGAGTGTCTCCACGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ILLIFMLWMKNREVKLLTYCPCH*RVSPRP Trigger: AGGCCGTGGAGACACTCTTCAGTGACATGGACAATA...GGTGAGCAACTTGACCTCTCTGTTCTTCATCCATAACATAAAGATGAGTAGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
||
| CDS-3UTR GCA 90 bp | CTACTCATCTTTATGTTATGGATGAAGAACAGAGAGGTCAAGTTGCTCACCCAACGGATTAAGGTTCTCTaGTCTCTCTCTTTTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLIFMLWMKNREVKLLTQRIKVL*SLSFPF Trigger: GAAAGGAAAAGAGAGAGAGCAGAGAACCTTAATCCG...TTGGGTGAGCAACTTGACCTCTCTGTTCTTCATCCATAACATAAAGATGAGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
||
| CDS-3UTR CAA 90 bp | AGGTGCGCTGTGCTGGAATCGCGCTGCCAGAGGCCAGGGCGGCACCTGCCAGGGGTGATCCCGGGGTTCTaGCGAAACTCCTCCACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RCAVLESRCQRPGRHLPGVIPGF*RNSSTN Trigger: GTTTGTGGAGGAGTTTCGCAAGAACCCCGGGATCAC...CCCTGGCAGGTGCCGCCCTGGCCTCTGGCAGCGCGATTCCAGCACAGCGCACCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS GCA 90 bp | CCTGGTAAGCTAGGCAGCAGGGGAGGGCAGACGGTGACCCCTCCGTaGCCTGCCTTGCCCACTTCTCGTAGTGGTTCCGGAAGTGGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: PGKLGSRGGQTVTPP*PALPTSRSGSGSGL Trigger: TAAGCCACTTCCGGAACCACTACGAGAAGTGGGCAAGGCAGGGCACGGAGGGGTCACCGTCTGCCCTCCCCTGCTGCCTAGCTTACCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152158.8 |
||
| CDS-3UTR CAA 90 bp | AGGTGCGCTGTGCTGGAATCGCGCTGCCAGAGGCCAGGGCGGCACCTGCCAGGGTTCATGAGGGTGGTCTaGAAGCGGATTAAGGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RCAVLESRCQRPGRHLPGFMRVV*KRIKVL Trigger: GAGAACCTTAATCCGCTTCAAGACCACCCTCATGAA...CCCTGGCAGGTGCCGCCCTGGCCTCTGGCAGCGCGATTCCAGCACAGCGCACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099197.9 ENSMUST00000165343.8 |
||
| CDS-3UTR CAA 90 bp | GGAATCGCGCTGCCAGAGGCCAGGGCGGCACCTGCCAGGGCCTCATTTCTTCTGGGGAAGAAGTCACACTaGGCTGCCTCCGTCTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GIALPEARAAPARASFLLGKKSH*AASVFP Trigger: AGGAAAGACGGAGGCAGCCAAGTGTGACTTCTTCCC...CAGAAGAAATGAGGCCCTGGCAGGTGCCGCCCTGGCCTCTGGCAGCGCGATTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR CAA 90 bp | GTGCTGGAATCGCGCTGCCAGAGGCCAGGGCGGCACCTGCCAGGGCCTCATTTCAGTGTGAATCGGGTGTaGGAGAACCTGGCAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VLESRCQRPGRHLPGPHFSVNRV*ENLAKP Trigger: TGGCTTTGCCAGGTTCTCCAACACCCGATTCACACT...GAAATGAGGCCCTGGCAGGTGCCGCCCTGGCCTCTGGCAGCGCGATTCCAGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR CAA 90 bp | TCCTTTCCTGTGAGCCTGGCCTCCATGTCCACCACGTGCAGGGTATCCTCCAGCCATTCGCCTTCATCTTaGACTTCCACCCATCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SFPVSLASMSTTCRVSSSHSPSS*TSTHPG Trigger: GCCCGGATGGGTGGAAGTCAAAGATGAAGGCGAATG...GCTGGAGGATACCCTGCACGTGGTGGACATGGAGGCCAGGCTCACAGGAAAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109801.9 ENSMUST00000152158.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCCGTCAGGGAAGGAGAGGCATTGACTTCTAGGAGCCACGGCTTGAGGTCCGGGAAGAAGTCACACTaGGCTGCCTCCGTCTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LAVREGEALTSRSHGLRSGKKSH*AASVFP Trigger: AGGAAAGACGGAGGCAGCCAAGTGTGACTTCTTCCC...GGACCTCAAGCCGTGGCTCCTAGAAGTCAATGCCTCTCCTTCCCTGACGGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109801.9 |
||
| CDS-3UTR CAA 90 bp | AGGTGCGCTGTGCTGGAATCGCGCTGCCAGAGGCCAGGGCGGCACCTGCCAGGGCTCTTGATGAAGATATaGTCCATGTCACTGAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RCAVLESRCQRPGRHLPGLLMKI*SMSLKS Trigger: ACTCTTCAGTGACATGGACAATATCTTCATCAAGAG...CCCTGGCAGGTGCCGCCCTGGCCTCTGGCAGCGCGATTCCAGCACAGCGCACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR CAA 90 bp | CGCTTGAAGGGATCGGAACAGCTGCCTGAGCTGCTCCTTCCGGTCATTGACGCAGTGATCCCGGGGTTCTaGCGAAACTCCTCCACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RLKGSEQLPELLLPVIDAVIPGF*RNSSTN Trigger: GTTTGTGGAGGAGTTTCGCAAGAACCCCGGGATCAC...TGCGTCAATGACCGGAAGGAGCAGCTCAGGCAGCTGTTCCGATCCCTTCAAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109801.9 |
||
| CDS-3UTR CAA 90 bp | GCCGTCAGGGAAGGAGAGGCATTGACTTCTAGGAGCCACGGCTTGAGGTCCTGGGGTCATCAGAACTCCTaGTGTCCTTCCTCCAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: AVREGEALTSRSHGLRSWGHQNS*CPSSSP Trigger: TGGACTGGAGGAAGGACACAAGGAGTTCTGATGACC...CCAGGACCTCAAGCCGTGGCTCCTAGAAGTCAATGCCTCTCCTTCCCTGACGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109801.9 |
||
| CDS GCA 90 bp | TGCCCTGCCTTGCCCACTTCTCGTAGTGGTTCCGGAAGTGGCTTATaGGCACGTGCTCATCCATGTAGGTGTGGTCAAAGTTCTCCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: CPALPTSRSGSGSGL*ARAHPCRCGQSSPA Trigger: TGCGGGAGAACTTTGACCACACCTACATGGATGAGCACGTGCGCATAAGCCACTTCCGGAACCACTACGAGAAGTGGGCAAGGCAGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152158.8 |
||
| CDS-3UTR CAA 90 bp | GCCGTCAGGGAAGGAGAGGCATTGACTTCTAGGAGCCACGGCTTGAGGTCCTGGGGCATCTCAAAGGTTTaGGGGAAGAAGTCACACTTG | + |
|
Preference number: 5 (lower is better) Translates to: AVREGEALTSRSHGLRSWGISKV*GKKSHL Trigger: CAAGTGTGACTTCTTCCCCAAAACCTTTGAGATGCC...CCAGGACCTCAAGCCGTGGCTCCTAGAAGTCAATGCCTCTCCTTCCCTGACGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109801.9 |
||
| CDS-3UTR CAA 90 bp | CAAAGATTGGCTGTTCCTGGTTCAAAGATGCACAGGGCTGGAGTGGGGAGTCCATCTAGGAGCCACGGCTaGAGGTCCTGGTCAATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QRLAVPGSKMHRAGVGSPSRSHG*RSWSMR Trigger: CCTCATTGACCAGGACCTCAAGCCGTGGCTCCTAGA...TGGACTCCCCACTCCAGCCCTGTGCATCTTTGAACCAGGAACAGCCAATCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR CAA 90 bp | ACGCTGGAAAAAGGTGAAGACTGGAAAAAGGTGCGCTGTGCTGGAATCGCGCTGAGGGAAGGAGAGGCATaGACTTCTAGGAGCCACGGC | + |
|
Preference number: 5 (lower is better) Translates to: TLEKGEDWKKVRCAGIALREGEA*TSRSHG Trigger: GCCGTGGCTCCTAGAAGTCAATGCCTCTCCTTCCCT...CAGCGCGATTCCAGCACAGCGCACCTTTTTCCAGTCTTCACCTTTTTCCAGCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR CAA 90 bp | GAGAGGTCAAGTTGCTCACCCAAGTCACACAGCTGGTATGCTTGCTCTGCCAAGAGGGAAGGAGAGGCATaGACTTCTAGGAGCCACGGC | + |
|
Preference number: 5 (lower is better) Translates to: ERSSCSPKSHSWYACSAKREGEA*TSRSHG Trigger: GCCGTGGCTCCTAGAAGTCAATGCCTCTCCTTCCCT...CTTGGCAGAGCAAGCATACCAGCTGTGTGACTTGGGTGAGCAACTTGACCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
||
| CDS CCA 90 bp | GGTACTCACAGGGCATCTCAAAGGTTTTGGGGAAGAAGTCACACTTaGCTGCCTCCGTCTTTCCTGACTCACGCTCCAGGTACTTCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: GTHRASQRFWGRSHT*LPPSFLTHAPGTSG Trigger: TCCGGAAGTACCTGGAGCGTGAGTCAGGAAAGACGGAGGCAGCCAAGTGTGACTTCTTCCCCAAAACCTTTGAGATGCCCTGTGAGTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099197.9 ENSMUST00000103155.10 ENSMUST00000109801.9 ENSMUST00000155631.3 |
||
| CDS-3UTR CAA 90 bp | TCCTTTCCTGTGAGCCTGGCCTCCATGTCCACCACGTGCAGGGTATCCTCCAGCATGGCCCTTGGAATTTaGATTCTTCTGTCGCGACAT | + |
|
Preference number: 5 (lower is better) Translates to: SFPVSLASMSTTCRVSSSMALGI*ILLSRH Trigger: ATGTCGCGACAGAAGAATCAAAATTCCAAGGGCCAT...GCTGGAGGATACCCTGCACGTGGTGGACATGGAGGCCAGGCTCACAGGAAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109801.9 ENSMUST00000152158.8 |
||
| CDS-3UTR CAA 90 bp | TCGGGTGTTGGAGAACCTGGCAAAGCCATCACGGTACAGCCATGCCCGCAGAGGATGGCCCTTGGAATTTaGATTCTTCTGTCGCGACAT | + |
|
Preference number: 5 (lower is better) Translates to: SGVGEPGKAITVQPCPQRMALGI*ILLSRH Trigger: ATGTCGCGACAGAAGAATCAAAATTCCAAGGGCCAT...CCTCTGCGGGCATGGCTGTACCGTGATGGCTTTGCCAGGTTCTCCAACACCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152158.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGATTGGCTGTTCCTGGTTCAAAGATGCACAGGGCTGGAGTGGGGAGTCCACATTCGCCTTCATCTTaGACTTCCACCCATCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QRLAVPGSKMHRAGVGSPHSPSS*TSTHPG Trigger: GCCCGGATGGGTGGAAGTCAAAGATGAAGGCGAATG...TGGACTCCCCACTCCAGCCCTGTGCATCTTTGAACCAGGAACAGCCAATCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR CAA 90 bp | ACAGAGAGGTCAAGTTGCTCACCCAAGTCACACAGCTGGTATGCTTGCTCTGCCCATTCGCCTTCATCTTaGACTTCCACCCATCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TERSSCSPKSHSWYACSAHSPSS*TSTHPG Trigger: GCCCGGATGGGTGGAAGTCAAAGATGAAGGCGAATG...GGCAGAGCAAGCATACCAGCTGTGTGACTTGGGTGAGCAACTTGACCTCTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103155.10 ENSMUST00000152158.8 |
||
| CDS-3UTR CAA 90 bp | ACGCTGGAAAAAGGTGAAGACTGGAAAAAGGTGCGCTGTGCTGGAATCGCGCTGGGTCATCAGAACTCCTaGTGTCATGGCTGCCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TLEKGEDWKKVRCAGIALGHQNS*CHGCLR Trigger: CCTCAGGCAGCCATGACACAAGGAGTTCTGATGACC...CAGCGCGATTCCAGCACAGCGCACCTTTTTCCAGTCTTCACCTTTTTCCAGCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR CAA 90 bp | ACAGAGAGGTCAAGTTGCTCACCCAAGTCACACAGCTGGTATGCTTGCTCTGCCAGTGTGAATCGGGTGTaGGAGAACCTGGCAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TERSSCSPKSHSWYACSASVNRV*ENLAKP Trigger: TGGCTTTGCCAGGTTCTCCAACACCCGATTCACACT...GGCAGAGCAAGCATACCAGCTGTGTGACTTGGGTGAGCAACTTGACCTCTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
||
| CDS TCA 90 bp | AAAGGTTTTGGGGAAGAAGTCACACTTGGCTGCCTCCGTCTTTCCTaGCTCACGCTCCAGGTACTTCCGGAAGCGCTTCAGGTTCTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: KGFGEEVTLGCLRLS*LTLQVLPEALQVLY Trigger: GTAAAGAACCTGAAGCGCTTCCGGAAGTACCTGGAGCGTGAGTCAGGAAAGACGGAGGCAGCCAAGTGTGACTTCTTCCCCAAAACCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099197.9 ENSMUST00000103155.10 ENSMUST00000109801.9 ENSMUST00000155631.3 |
||
| CDS CCA 90 bp | AAATCCCATTCGCCTTCATCTTTGACTTCCACCCATCCGGGCCTGTaGCGCAGAACATCCATGAGTGTGTTCATGAGGGTGGTCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KSHSPSSLTSTHPGL*RRTSMSVFMRVVLK Trigger: CTTCAAGACCACCCTCATGAACACACTCATGGATGTTCTGCGCCACAGGCCCGGATGGGTGGAAGTCAAAGATGAAGGCGAATGGGATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099197.9 ENSMUST00000103155.10 ENSMUST00000109801.9 ENSMUST00000152158.8 ENSMUST00000155631.3 |
||
| CDS-3UTR CAA 90 bp | GGAGTCTGGTCCAAGTACAAGCTGGTCCTGTCCAGTGAAACAGCTGCCACGCTGATGGCCCTTGGAATTTaGATTCTTCTGTCGCGACAT | + |
|
Preference number: 5 (lower is better) Translates to: GVWSKYKLVLSSETAATLMALGI*ILLSRH Trigger: ATGTCGCGACAGAAGAATCAAAATTCCAAGGGCCAT...CAGCGTGGCAGCTGTTTCACTGGACAGGACCAGCTTGTACTTGGACCAGACTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR CAA 90 bp | ACGCTGGAAAAAGGTGAAGACTGGAAAAAGGTGCGCTGTGCTGGAATCGCGCTGGGCATCTCAAAGGTTTaGGGGAAGAAGTCACACTTG | + |
|
Preference number: 5 (lower is better) Translates to: TLEKGEDWKKVRCAGIALGISKV*GKKSHL Trigger: CAAGTGTGACTTCTTCCCCAAAACCTTTGAGATGCC...CAGCGCGATTCCAGCACAGCGCACCTTTTTCCAGTCTTCACCTTTTTCCAGCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000099197.9 |
||
| CDS-3UTR CAA 90 bp | GAGGCATTGACTTCTAGGAGCCACGGCTTGAGGTCCTGGTCAATGAGGATGTCAGGTCATCAGAACTCCTaGTGTCTCTTTGACTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: EALTSRSHGLRSWSMRMSGHQNS*CLFDFH Trigger: GTGGAAGTCAAAGAGACACAAGGAGTTCTGATGACC...TGACATCCTCATTGACCAGGACCTCAAGCCGTGGCTCCTAGAAGTCAATGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165343.8 |
||
| CDS-3UTR CAA 90 bp | AGAGAGGTCAAGTTGCTCACCCAAGTCACACAGCTGGTATGCTTGCTCTGCCAAGGCATCTCAAAGGTTTaGGGGAAGAAGTCACACTTG | + |
|
Preference number: 5 (lower is better) Translates to: REVKLLTQVTQLVCLLCQGISKV*GKKSHL Trigger: CAAGTGTGACTTCTTCCCCAAAACCTTTGAGATGCC...TTGGCAGAGCAAGCATACCAGCTGTGTGACTTGGGTGAGCAACTTGACCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
||
| CDS-3UTR CAA 90 bp | TTATGGATGAAGAACAGAGAGGTCAAGTTGCTCACCCAAGTCACACAGCTGGTAGTGATCCCGGGGTTCTaGCGAAACTCCTCCACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LWMKNREVKLLTQVTQLVVIPGF*RNSSTN Trigger: GTTTGTGGAGGAGTTTCGCAAGAACCCCGGGATCAC...TACCAGCTGTGTGACTTGGGTGAGCAACTTGACCTCTCTGTTCTTCATCCATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
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| CDS-3UTR CAA 90 bp | AGAGAGGTCAAGTTGCTCACCCAAGTCACACAGCTGGTATGCTTGCTCTGCCAAATGGCCCTTGGAATTTaGATTCTTCTGTCGCGACAT | + |
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Preference number: 5 (lower is better) Translates to: REVKLLTQVTQLVCLLCQMALGI*ILLSRH Trigger: ATGTCGCGACAGAAGAATCAAAATTCCAAGGGCCAT...TTGGCAGAGCAAGCATACCAGCTGTGTGACTTGGGTGAGCAACTTGACCTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103155.10 ENSMUST00000152158.8 |
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| CDS-3UTR CAA 90 bp | TTTATGTTATGGATGAAGAACAGAGAGGTCAAGTTGCTCACCCAAGTCACACAGGGTCATCAGAACTCCTaGTGTCATGGCTGCCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: FMLWMKNREVKLLTQVTQGHQNS*CHGCLR Trigger: CCTCAGGCAGCCATGACACAAGGAGTTCTGATGACC...CTGTGTGACTTGGGTGAGCAACTTGACCTCTCTGTTCTTCATCCATAACATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
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| CDS-3UTR CAA 90 bp | ATCTTTATGTTATGGATGAAGAACAGAGAGGTCAAGTTGCTCACCCAAGTCACATCTAGGAGCCACGGCTaGAGGTCCTGGTCAATGAGG | + |
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Preference number: 5 (lower is better) Translates to: IFMLWMKNREVKLLTQVTSRSHG*RSWSMR Trigger: CCTCATTGACCAGGACCTCAAGCCGTGGCTCCTAGA...TGTGACTTGGGTGAGCAACTTGACCTCTCTGTTCTTCATCCATAACATAAAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
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| CDS-3UTR CAA 90 bp | GTTGGACATGACACCTGTAAGATACTACTCATCTTTATGTTATGGATGAAGAACCATTCGCCTTCATCTTaGACTTCCACCCATCCGGGC | + |
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Preference number: 5 (lower is better) Translates to: VGHDTCKILLIFMLWMKNHSPSS*TSTHPG Trigger: GCCCGGATGGGTGGAAGTCAAAGATGAAGGCGAATG...GTTCTTCATCCATAACATAAAGATGAGTAGTATCTTACAGGTGTCATGTCCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
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| CDS-3UTR CAA 90 bp | ACCTGTAAGATACTACTCATCTTTATGTTATGGATGAAGAACAGAGAGGTCAAGGGGAAGAAGTCACACTaGGCTGCCTCCGTCTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: TCKILLIFMLWMKNREVKGKKSH*AASVFP Trigger: AGGAAAGACGGAGGCAGCCAAGTGTGACTTCTTCCC...CTTGACCTCTCTGTTCTTCATCCATAACATAAAGATGAGTAGTATCTTACAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
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| CDS-3UTR CAA 90 bp | CTACTCATCTTTATGTTATGGATGAAGAACAGAGAGGTCAAGTTGCTCACCCAACTCTTGATGAAGATATaGTCCATGTCACTGAAGAGT | + |
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Preference number: 5 (lower is better) Translates to: LLIFMLWMKNREVKLLTQLLMKI*SMSLKS Trigger: ACTCTTCAGTGACATGGACAATATCTTCATCAAGAG...TTGGGTGAGCAACTTGACCTCTCTGTTCTTCATCCATAACATAAAGATGAGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103155.10 |
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| CDS GCA 72 bp | CTAGGCAGCAGGGGAGGGCAGACGGTGACCCCTCCGTaGCCTGCCTTGCCCACTTCTCGTAGTGGTTCCGGA | + |
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Preference number: 6 (lower is better) Translates to: LGSRGGQTVTPP*PALPTSRSGSG Trigger: TCCGGAACCACTACGAGAAGTGGGCAAGGCAGGGCACGGAGGGGTCACCGTCTGCCCTCCCCTGCTGCCTAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152158.8 |
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| CDS CAA 90 bp | CTAGGCAGCAGGGGAGGGCAGACGGTGACCCCTCCGTGCCCTGCCTaGCCCACTTCTCGTAGTGGTTCCGGAAGTGGCTTATGCGCACGT | + |
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Preference number: 6 (lower is better) Translates to: LGSRGGQTVTPPCPA*PTSRSGSGSGLCAR Trigger: ACGTGCGCATAAGCCACTTCCGGAACCACTACGAGAAGTGGGCAAGGCAGGGCACGGAGGGGTCACCGTCTGCCCTCCCCTGCTGCCTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152158.8 |
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| CDS TCA 72 bp | GGGGAAGAAGTCACACTTGGCTGCCTCCGTCTTTCCTaGCTCACGCTCCAGGTACTTCCGGAAGCGCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: GEEVTLGCLRLS*LTLQVLPEALQ Trigger: CTGAAGCGCTTCCGGAAGTACCTGGAGCGTGAGTCAGGAAAGACGGAGGCAGCCAAGTGTGACTTCTTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099197.9 ENSMUST00000103155.10 ENSMUST00000109801.9 ENSMUST00000155631.3 |
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| CDS CCA 72 bp | TCGCCTTCATCTTTGACTTCCACCCATCCGGGCCTGTaGCGCAGAACATCCATGAGTGTGTTCATGAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: SPSSLTSTHPGL*RRTSMSVFMRV Trigger: CACCCTCATGAACACACTCATGGATGTTCTGCGCCACAGGCCCGGATGGGTGGAAGTCAAAGATGAAGGCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099197.9 ENSMUST00000103155.10 ENSMUST00000109801.9 ENSMUST00000152158.8 ENSMUST00000155631.3 |
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| CDS CAA 72 bp | CAGGGCATCTCAAAGGTTTTGGGGAAGAAGTCACACTaGGCTGCCTCCGTCTTTCCTGACTCACGCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: QGISKVLGKKSH*AASVFPDSRSR Trigger: CCTGGAGCGTGAGTCAGGAAAGACGGAGGCAGCCAAGTGTGACTTCTTCCCCAAAACCTTTGAGATGCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099197.9 ENSMUST00000103155.10 ENSMUST00000109801.9 ENSMUST00000155631.3 |
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| CDS CAA 90 bp | TGGTACTCACAGGGCATCTCAAAGGTTTTGGGGAAGAAGTCACACTaGGCTGCCTCCGTCTTTCCTGACTCACGCTCCAGGTACTTCCGG | + |
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Preference number: 6 (lower is better) Translates to: WYSQGISKVLGKKSH*AASVFPDSRSRYFR Trigger: CCGGAAGTACCTGGAGCGTGAGTCAGGAAAGACGGAGGCAGCCAAGTGTGACTTCTTCCCCAAAACCTTTGAGATGCCCTGTGAGTACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099197.9 ENSMUST00000103155.10 ENSMUST00000109801.9 ENSMUST00000155631.3 |
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| CDS GCA 72 bp | TCGACATCACCAGCACGTAGACGCGCAGGTCAAACTTaGGGCCTCCTATTAAGTAGGGGTTTTCCACGTAAC | + |
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Preference number: 6 (lower is better) Translates to: STSPARRRAGQT*GLLLSRGFPRN Trigger: GTTACGTGGAAAACCCCTACTTAATAGGAGGCCGCAAGTTTGACCTGCGCGTCTACGTGCTGGTGATGTCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109801.9 |
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| CDS GCA 72 bp | TTGCCCACTTCTCGTAGTGGTTCCGGAAGTGGCTTATaGGCACGTGCTCATCCATGTAGGTGTGGTCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: LPTSRSGSGSGL*ARAHPCRCGQS Trigger: ACTTTGACCACACCTACATGGATGAGCACGTGCGCATAAGCCACTTCCGGAACCACTACGAGAAGTGGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152158.8 |
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| CDS CAA 90 bp | GGCCTGTGGCGCAGAACATCCATGAGTGTGTTCATGAGGGTGGTCTaGAAGCGGATTAAGGTTCTCTGCTCTTTTGATCCCCTAGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: GLWRRTSMSVFMRVV*KRIKVLCSFDPLGS Trigger: TGACCCTAGGGGATCAAAAGAGCAGAGAACCTTAATCCGCTTCAAGACCACCCTCATGAACACACTCATGGATGTTCTGCGCCACAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155631.3 |
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| CDS CAA 90 bp | GGCCTGTGGCGCAGAACATCCATGAGTGTGTTCATGAGGGTGGTCTaGAAGCGGATTAAGGTTCTCTGCTCTCTCTCTTTTCCTTTCGAC | + |
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Preference number: 6 (lower is better) Translates to: GLWRRTSMSVFMRVV*KRIKVLCSLSFPFD Trigger: GTCGAAAGGAAAAGAGAGAGAGCAGAGAACCTTAATCCGCTTCAAGACCACCCTCATGAACACACTCATGGATGTTCTGCGCCACAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099197.9 ENSMUST00000103155.10 ENSMUST00000109801.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
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| CDS CAA 90 bp | AACTCCTCCACAAACAGATGGTACTCACAGGGCATCTCAAAGGTTTaGGGGAAGAAGTCACACTTGGCTGCCTCCGTCTTTCCTGACTCA | + |
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Preference number: 6 (lower is better) Translates to: NSSTNRWYSQGISKV*GKKSHLAASVFPDS Trigger: TGAGTCAGGAAAGACGGAGGCAGCCAAGTGTGACTTCTTCCCCAAAACCTTTGAGATGCCCTGTGAGTACCATCTGTTTGTGGAGGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099197.9 ENSMUST00000103155.10 ENSMUST00000109801.9 ENSMUST00000155631.3 |
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| CDS TCA 72 bp | CCATGTAGGTGTGGTCAAAGTTCTCCCGCAGCCAGCTaGCATCACACCAATAGAAATCCCATTCGCCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: PCRCGQSSPAAS*HHTNRNPIRLH Trigger: ATGAAGGCGAATGGGATTTCTATTGGTGTGATGTCAGCTGGCTGCGGGAGAACTTTGACCACACCTACATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099197.9 ENSMUST00000103155.10 ENSMUST00000109801.9 ENSMUST00000152158.8 ENSMUST00000155631.3 |
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| CDS GCA 72 bp | TTCATGAGGGTGGTCTTGAAGCGGATTAAGGTTCTCTaGTCTCTCTCTTTTCCTTTCGACACTCCATGGCCC | + |
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Preference number: 6 (lower is better) Translates to: FMRVVLKRIKVL*SLSFPFDTPWP Trigger: GGGCCATGGAGTGTCGAAAGGAAAAGAGAGAGAGCAGAGAACCTTAATCCGCTTCAAGACCACCCTCATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099197.9 ENSMUST00000103155.10 ENSMUST00000109801.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
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| CDS CAA 72 bp | CGCAGAACATCCATGAGTGTGTTCATGAGGGTGGTCTaGAAGCGGATTAAGGTTCTCTGCTCTCTTCTGTCG | + |
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Preference number: 6 (lower is better) Translates to: RRTSMSVFMRVV*KRIKVLCSLLS Trigger: CGACAGAAGAGAGCAGAGAACCTTAATCCGCTTCAAGACCACCCTCATGAACACACTCATGGATGTTCTGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146626.9 |
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| CDS TCA 72 bp | GGTCATCAGAACTCCTTGTGTCCTTCCTCCAGTCCATaGTGTCTTTCAGTCTCCGGAAGAGAAATATGCCCT | + |
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Preference number: 6 (lower is better) Translates to: GHQNSLCPSSSP*CLSVSGREICP Trigger: AGGGCATATTTCTCTTCCGGAGACTGAAAGACATCATGGACTGGAGGAAGGACACAAGGAGTTCTGATGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109801.9 |
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| CDS CAA 72 bp | CGCAGAACATCCATGAGTGTGTTCATGAGGGTGGTCTaGAAGCGGATTAAGGTTCTCTGCTCTTTTGATCCC | + |
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Preference number: 6 (lower is better) Translates to: RRTSMSVFMRVV*KRIKVLCSFDP Trigger: GGGATCAAAAGAGCAGAGAACCTTAATCCGCTTCAAGACCACCCTCATGAACACACTCATGGATGTTCTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155631.3 |
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| CDS CAA 72 bp | CGCAGAACATCCATGAGTGTGTTCATGAGGGTGGTCTaGAAGCGGATTAAGGTTCTCTGCTCTCTCTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: RRTSMSVFMRVV*KRIKVLCSLSF Trigger: AAAAGAGAGAGAGCAGAGAACCTTAATCCGCTTCAAGACCACCCTCATGAACACACTCATGGATGTTCTGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099197.9 ENSMUST00000103155.10 ENSMUST00000109801.9 ENSMUST00000152158.8 ENSMUST00000165343.8 |
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