Pregenerated sensors for TTLL8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022388Ensembl transcript IDs: ENSMUST00000109371.8, ENSMUST00000177180.8, ENSMUST00000177254.8
Found 188 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCGTCTTCATTCTCATCCTGGTCCTCGTCGTGGGCTCCTCCAGCTaGCTGGCCGCCCACCGCCCCAGCAGCAGCAGAAGGCGCCCTGCG | + |
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Preference number: 1 (lower is better) Translates to: PVFILILVLVVGSSS*LAAHRPSSSRRRPA Trigger: CGCAGGGCGCCTTCTGCTGCTGCTGGGGCGGTGGGCGGCCAGGCAGCTGGAGGAGCCCACGACGAGGACCAGGATGAGAATGAAGACGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177180.8 |
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| 3UTR CCA 90 bp | GGGGGCGTCTCGGTCCCGTCTTCATTCTCATCCTGGTCCTCGTCGTaGGCTCCTCCAGCTGCCTGGCCGCCCACCGCCCCAGCAGCAGCA | + |
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Preference number: 1 (lower is better) Translates to: GGVSVPSSFSSWSSS*APPAAWPPTAPAAA Trigger: TGCTGCTGCTGGGGCGGTGGGCGGCCAGGCAGCTGGAGGAGCCCACGACGAGGACCAGGATGAGAATGAAGACGGGACCGAGACGCCCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177180.8 |
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| 3UTR CCA 90 bp | TCTTCATTCTCATCCTGGTCCTCGTCGTGGGCTCCTCCAGCTGCCTaGCCGCCCACCGCCCCAGCAGCAGCAGAAGGCGCCCTGCGGCAT | + |
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Preference number: 1 (lower is better) Translates to: SSFSSWSSSWAPPAA*PPTAPAAAEGALRH Trigger: ATGCCGCAGGGCGCCTTCTGCTGCTGCTGGGGCGGTGGGCGGCCAGGCAGCTGGAGGAGCCCACGACGAGGACCAGGATGAGAATGAAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177180.8 |
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| 3UTR GCA 90 bp | ACGGTGGCAGCTCCACGGCAGGCTGCCGCCACAGAAGCTCAAAGTTaGCGATGTCACAGTTTCGGTCCAGTTTGCGATCCACCACCACCT | + |
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Preference number: 1 (lower is better) Translates to: TVAAPRQAAATEAQS*RCHSFGPVCDPPPP Trigger: AGGTGGTGGTGGATCGCAAACTGGACCGAAACTGTGACATCGGCAACTTTGAGCTTCTGTGGCGGCAGCCTGCCGTGGAGCTGCCACCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR GCA 90 bp | ACACAGAGGTCAGACCCGTTGAACGGTGGCAGCTCCACGGCAGGCTaGCGCCACAGAAGCTCAAAGTTGCCGATGTCACAGTTTCGGTCC | + |
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Preference number: 1 (lower is better) Translates to: TQRSDPLNGGSSTAG*RHRSSKLPMSQFRS Trigger: GGACCGAAACTGTGACATCGGCAACTTTGAGCTTCTGTGGCGGCAGCCTGCCGTGGAGCTGCCACCGTTCAACGGGTCTGACCTCTGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR GCA 90 bp | CCGTGCGCCGGAAGTCATCCAAGAATTCCTGCTTCTCGCTCTCAGTaGAAAGGCCATAGCACCGTGGGAAGAAGGTGTTCGGGTTGGCTT | + |
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Preference number: 1 (lower is better) Translates to: PCAGSHPRIPASRSQ*KGHSTVGRRCSGWL Trigger: AAGCCAACCCGAACACCTTCTTCCCACGGTGCTATGGCCTTTGCACTGAGAGCGAGAAGCAGGAATTCTTGGATGACTTCCGGCGCACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR GCA 90 bp | ACGTTCCTCCTCGGCCCCTCTTCTGCAGGTACTCCTGGAAACGAGTaGTGGTCCACATGTTATGACAAGGTAGCAGCGGACTGCGCTCTT | + |
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Preference number: 1 (lower is better) Translates to: TFLLGPSSAGTPGNE*WSTCYDKVAADCAL Trigger: AAGAGCGCAGTCCGCTGCTACCTTGTCATAACATGTGGACCAGCACTCGTTTCCAGGAGTACCTGCAGAAGAGGGGCCGAGGAGGAACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR CCA 90 bp | GCTGTGTCAGGTCATTCCATTCCTCCTCAGACAAGGCCTCGGTGCTaGCCTCCGATACGTCTATGTCTTCATGCTCTAGCTGTCCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: AVSGHSIPPQTRPRC*PPIRLCLHALAVPG Trigger: ACCTGGGACAGCTAGAGCATGAAGACATAGACGTATCGGAGGCCAGCACCGAGGCCTTGTCTGAGGAGGAATGGAATGACCTGACACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR CCA 90 bp | GTCTCGATGTACTTCTGGACCACCCATTTGTTGTCCTTTGTGGTCTaGCTGTCTGCGGCCACCAGACTCAGGATGTTCTCCACACGGTCC | + |
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Preference number: 1 (lower is better) Translates to: VSMYFWTTHLLSFVV*LSAATRLRMFSTRS Trigger: GGACCGTGTGGAGAACATCCTGAGTCTGGTGGCCGCAGACAGCCAGACCACAAAGGACAACAAATGGGTGGTCCAGAAGTACATCGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR CCA 90 bp | ACAGGTGGATGGCGCTGTCCAGCTTGTCCAGGGAGAAGCGCTGTGTaGAGAAGCGGAGGTAGCTTTCTTTGTAGAACCAGATGGTTAGGG | + |
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Preference number: 1 (lower is better) Translates to: TGGWRCPACPGRSAV*RSGGSFLCRTRWLG Trigger: CCCTAACCATCTGGTTCTACAAAGAAAGCTACCTCCGCTTCTCCACACAGCGCTTCTCCCTGGACAAGCTGGACAGCGCCATCCACCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR TCA 90 bp | GATCCCCCTGATCCAGCCCTGTGCCCTGCTTTGGAGAATACAGCTTaGAGGTCGTCTCTGAGAATTGGGGTGGAGCCAGAGTTCCTCAAA | + |
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Preference number: 1 (lower is better) Translates to: DPPDPALCPALENTA*RSSLRIGVEPEFLK Trigger: TTTGAGGAACTCTGGCTCCACCCCAATTCTCAGAGACGACCTTCAAGCTGTATTCTCCAAAGCAGGGCACAGGGCTGGATCAGGGGGATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177254.8 |
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| 3UTR GCA 90 bp | ACTGCTGTGTCAGGTCATTCCATTCCTCCTCAGACAAGGCCTCGGTaGTGGCCTCCGATACGTCTATGTCTTCATGCTCTAGCTGTCCCA | + |
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Preference number: 1 (lower is better) Translates to: TAVSGHSIPPQTRPR*WPPIRLCLHALAVP Trigger: TGGGACAGCTAGAGCATGAAGACATAGACGTATCGGAGGCCAGCACCGAGGCCTTGTCTGAGGAGGAATGGAATGACCTGACACAGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR GCA 90 bp | GTACTTCTGGACCACCCATTTGTTGTCCTTTGTGGTCTGGCTGTCTaGGGCCACCAGACTCAGGATGTTCTCCACACGGTCCATACACAC | + |
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Preference number: 1 (lower is better) Translates to: VLLDHPFVVLCGLAV*GHQTQDVLHTVHTH Trigger: GTGTGTATGGACCGTGTGGAGAACATCCTGAGTCTGGTGGCCGCAGACAGCCAGACCACAAAGGACAACAAATGGGTGGTCCAGAAGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR CCA 90 bp | TCTCAGTGCAAAGGCCATAGCACCGTGGGAAGAAGGTGTTCGGGTTaGCTTGGACGTACCAAGGCAGACTTCTCATGTTCAGGCAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: SQCKGHSTVGRRCSG*LGRTKADFSCSGRV Trigger: GACTCTGCCTGAACATGAGAAGTCTGCCTTGGTACGTCCAAGCCAACCCGAACACCTTCTTCCCACGGTGCTATGGCCTTTGCACTGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR CCA 90 bp | TTGGGGTCTCGATGTACTTCTGGACCACCCATTTGTTGTCCTTTGTaGTCTGGCTGTCTGCGGCCACCAGACTCAGGATGTTCTCCACAC | + |
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Preference number: 1 (lower is better) Translates to: LGSRCTSGPPICCPL*SGCLRPPDSGCSPH Trigger: GTGTGGAGAACATCCTGAGTCTGGTGGCCGCAGACAGCCAGACCACAAAGGACAACAAATGGGTGGTCCAGAAGTACATCGAGACCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR CCA 90 bp | TTCCTCCTCGGCCCCTCTTCTGCAGGTACTCCTGGAAACGAGTGCTaGTCCACATGTTATGACAAGGTAGCAGCGGACTGCGCTCTTTAT | + |
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Preference number: 1 (lower is better) Translates to: FLLGPSSAGTPGNEC*STCYDKVAADCALY Trigger: ATAAAGAGCGCAGTCCGCTGCTACCTTGTCATAACATGTGGACCAGCACTCGTTTCCAGGAGTACCTGCAGAAGAGGGGCCGAGGAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR TCA 90 bp | CAGCCCTGTGCCCTGCTTTGGAGAATACAGCTTGAAGGTCGTCTCTaGGAATTGGGGTGGAGCCAGAGTTCCTCAAATACAATGGGACAG | + |
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Preference number: 1 (lower is better) Translates to: QPCALLWRIQLEGRL*ELGWSQSSSNTMGQ Trigger: CTGTCCCATTGTATTTGAGGAACTCTGGCTCCACCCCAATTCTCAGAGACGACCTTCAAGCTGTATTCTCCAAAGCAGGGCACAGGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177254.8 |
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| 3UTR TCA 90 bp | CTCTTCTGCAGGTACTCCTGGAAACGAGTGCTGGTCCACATGTTATaGCAAGGTAGCAGCGGACTGCGCTCTTTATCATTTTTGAGGCGC | + |
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Preference number: 1 (lower is better) Translates to: LFCRYSWKRVLVHML*QGSSGLRSLSFLRR Trigger: GCGCCTCAAAAATGATAAAGAGCGCAGTCCGCTGCTACCTTGTCATAACATGTGGACCAGCACTCGTTTCCAGGAGTACCTGCAGAAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR CCA 90 bp | GTCGTCTCTGAGAATTGGGGTGGAGCCAGAGTTCCTCAAATACAATaGGACAGAAAGGCGAAGAGTCTCTATGGTTACCTGACGCAGTGG | + |
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Preference number: 1 (lower is better) Translates to: VVSENWGGARVPQIQ*DRKAKSLYGYLTQW Trigger: CCACTGCGTCAGGTAACCATAGAGACTCTTCGCCTTTCTGTCCCATTGTATTTGAGGAACTCTGGCTCCACCCCAATTCTCAGAGACGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177254.8 |
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| 3UTR TCA 90 bp | GCAGGCTTTATGATCCAGATGTTCCGGATCCCATCGATCTCTGTCTaGGGGTTCACAGAACTGATCTTACTCAGCAGAGCTTGGCATTGC | + |
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Preference number: 1 (lower is better) Translates to: AGFMIQMFRIPSISV*GFTELILLSRAWHC Trigger: GCAATGCCAAGCTCTGCTGAGTAAGATCAGTTCTGTGAACCCTCAGACAGAGATCGATGGGATCCGGAACATCTGGATCATAAAGCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR TCA 90 bp | AGATGTTCCGGATCCCATCGATCTCTGTCTGAGGGTTCACAGAACTaGTCTTACTCAGCAGAGCTTGGCATTGCGCAAAGTAACTTTTCG | + |
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Preference number: 1 (lower is better) Translates to: RCSGSHRSLSEGSQN*SYSAELGIAQSNFS Trigger: CGAAAAGTTACTTTGCGCAATGCCAAGCTCTGCTGAGTAAGATCAGTTCTGTGAACCCTCAGACAGAGATCGATGGGATCCGGAACATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGAAGGCGCCCTGCGGCATCAAGGCGCAGGGAGAGGCTTGCAGGGCCAGGGCGAAGGACTACCCACTTaGGGATGCTGGCAGCCACCG | + |
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Preference number: 2 (lower is better) Translates to: AEGALRHQGAGRGLQGQGEGLPT*GCWQPP Trigger: CGGTGGCTGCCAGCATCCTCAAGTGGGTAGTCCTTC...GCCCTGGCCCTGCAAGCCTCTCCCTGCGCCTTGATGCCGCAGGGCGCCTTCTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177180.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGAAGGCGCCCTGCGGCATCAAGGCGCAGGGAGAGGCTTGCAGGGCCAGGGCACTCCTGGAAACGAGTaGTGGTCCACATGTTATGAC | + |
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Preference number: 2 (lower is better) Translates to: AEGALRHQGAGRGLQGQGTPGNE*WSTCYD Trigger: GTCATAACATGTGGACCAGCACTCGTTTCCAGGAGT...GCCCTGGCCCTGCAAGCCTCTCCCTGCGCCTTGATGCCGCAGGGCGCCTTCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177180.8 |
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| 3UTR-3UTR TCA 90 bp | CGGAAGCCCTTTGCTTCTTCCCGTTTCCAGTCCTGCCGCACGGTCGTTCTTGGAACCTGGGCACAGAGCTaGGCTGTGACGGGAGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: RKPFASSRFQSCRTVVLGTWAQS*AVTGVE Trigger: CTCCACTCCCGTCACAGCTCAGCTCTGTGCCCAGGT...TCCAAGAACGACCGTGCGGCAGGACTGGAAACGGGAAGAAGCAAAGGGCTTCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177180.8 |
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| 3UTR CAA 90 bp | AACGGTGGCAGCTCCACGGCAGGCTGCCGCCACAGAAGCTCAAAGTaGCCGATGTCACAGTTTCGGTCCAGTTTGCGATCCACCACCACC | + |
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Preference number: 2 (lower is better) Translates to: NGGSSTAGCRHRSSK*PMSQFRSSLRSTTT Trigger: GGTGGTGGTGGATCGCAAACTGGACCGAAACTGTGACATCGGCAACTTTGAGCTTCTGTGGCGGCAGCCTGCCGTGGAGCTGCCACCGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR-3UTR GCA 90 bp | GTTCTTGGAGGCCTGATCACTGTTTCCATCAGGGCCCGGGCACTCCGCACTTTGCCTCGGCCCCTCTTCTaGAGGTACTCCTGGAAACGA | + |
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Preference number: 2 (lower is better) Translates to: VLGGLITVSIRARALRTLPRPLF*RYSWKR Trigger: TCGTTTCCAGGAGTACCTGCAGAAGAGGGGCCGAGG...CAAAGTGCGGAGTGCCCGGGCCCTGATGGAAACAGTGATCAGGCCTCCAAGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR-3UTR CCA 90 bp | GGCGCTTGGAGATCACACGGAAGCCCTTTGCTTCTTCCCGTTTCCAGTCCTGCCGGGAGAAGCGCTGTGTaGAGAAGCGGAGGTAGCTTT | + |
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Preference number: 2 (lower is better) Translates to: GAWRSHGSPLLLPVSSPAGRSAV*RSGGSF Trigger: AAAGCTACCTCCGCTTCTCCACACAGCGCTTCTCCC...GGCAGGACTGGAAACGGGAAGAAGCAAAGGGCTTCCGTGTGATCTCCAAGCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177180.8 |
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| 3UTR CAA 90 bp | CGCCACAGAAGCTCAAAGTTGCCGATGTCACAGTTTCGGTCCAGTTaGCGATCCACCACCACCTTGATGGTGTCCTCCTGCACCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: RHRSSKLPMSQFRSS*RSTTTLMVSSCTWA Trigger: TGCCCAGGTGCAGGAGGACACCATCAAGGTGGTGGTGGATCGCAAACTGGACCGAAACTGTGACATCGGCAACTTTGAGCTTCTGTGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR-3UTR CCA 90 bp | CGTTCCTCCTCGGCCCCTCTTCTGCAGGTACTCCTGGAAACGAGTGCTGGTCCATGGGGTCACTGTTCTTaGCCTCCTCCTTCTTACTCT | + |
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Preference number: 2 (lower is better) Translates to: RSSSAPLLQVLLETSAGPWGHCS*PPPSYS Trigger: AGAGTAAGAAGGAGGAGGCCAAGAACAGTGACCCCA...TGGACCAGCACTCGTTTCCAGGAGTACCTGCAGAAGAGGGGCCGAGGAGGAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR-3UTR TCA 90 bp | CGTTCCTCCTCGGCCCCTCTTCTGCAGGTACTCCTGGAAACGAGTGCTGGTCCAGTCCAATCTTGGTTGTaGATGATGCTGTCTTCCCGT | + |
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Preference number: 2 (lower is better) Translates to: RSSSAPLLQVLLETSAGPVQSWL*MMLSSR Trigger: ACGGGAAGACAGCATCATTCACAACCAAGATTGGAC...TGGACCAGCACTCGTTTCCAGGAGTACCTGCAGAAGAGGGGCCGAGGAGGAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR-3UTR TCA 90 bp | GGTGGGGCTGGAGTTGATCTCGATAAGCCATGGCTTGAAGTCTCGCCCCAGGATTGGCTGCAGGCTTTATaGTCCAGATGTTCCGGATCC | + |
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Preference number: 2 (lower is better) Translates to: GGAGVDLDKPWLEVSPQDWLQAL*SRCSGS Trigger: GGATCCGGAACATCTGGATCATAAAGCCTGCAGCCA...ATCCTGGGGCGAGACTTCAAGCCATGGCTTATCGAGATCAACTCCAGCCCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGGGGCTGGAGTTGATCTCGATAAGCCATGGCTTGAAGTCTCGCCCCAGGATTTCTGCAGGTACTCCTaGAAACGAGTGCTGGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: GGAGVDLDKPWLEVSPQDFCRYS*KRVLVH Trigger: GTGGACCAGCACTCGTTTCCAGGAGTACCTGCAGAA...ATCCTGGGGCGAGACTTCAAGCCATGGCTTATCGAGATCAACTCCAGCCCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR CAA 90 bp | GCATTGGGGTCTCGATGTACTTCTGGACCACCCATTTGTTGTCCTTaGTGGTCTGGCTGTCTGCGGCCACCAGACTCAGGATGTTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: ALGSRCTSGPPICCP*WSGCLRPPDSGCSP Trigger: TGGAGAACATCCTGAGTCTGGTGGCCGCAGACAGCCAGACCACAAAGGACAACAAATGGGTGGTCCAGAAGTACATCGAGACCCCAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR-3UTR CCA 90 bp | GTTGTCCTTTGTGGTCTGGCTGTCTGCGGCCACCAGACTCAGGATGTTCTCCACTGGGGTCACTGTTCTTaGCCTCCTCCTTCTTACTCT | + |
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Preference number: 2 (lower is better) Translates to: VVLCGLAVCGHQTQDVLHWGHCS*PPPSYS Trigger: AGAGTAAGAAGGAGGAGGCCAAGAACAGTGACCCCA...GTGGAGAACATCCTGAGTCTGGTGGCCGCAGACAGCCAGACCACAAAGGACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTTCTTACGGGCTTCTACGTGGTCCTGGGCTACCCTCATGGCATTGGTGACAGATCTTTCTTGGGGCTaGGGTCACTGTTCTTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: LFLRASTWSWATLMALVTDLSWG*GHCSWP Trigger: AGGCCAAGAACAGTGACCCCAGCCCCAAGAAAGATC...TGTCACCAATGCCATGAGGGTAGCCCAGGACCACGTAGAAGCCCGTAAGAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR CAA 90 bp | AGTGCAAAGGCCATAGCACCGTGGGAAGAAGGTGTTCGGGTTGGCTaGGACGTACCAAGGCAGACTTCTCATGTTCAGGCAGAGTCCAAT | + |
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Preference number: 2 (lower is better) Translates to: SAKAIAPWEEGVRVG*DVPRQTSHVQAESN Trigger: ATTGGACTCTGCCTGAACATGAGAAGTCTGCCTTGGTACGTCCAAGCCAACCCGAACACCTTCTTCCCACGGTGCTATGGCCTTTGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR-3UTR TCA 90 bp | GTGTCAGGTCATTCCATTCCTCCTCAGACAAGGCCTCGGTGCTGGCCTCCGATAAATCTTGGTTGTGAATaGTGCTGTCTTCCCGTAGTG | + |
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Preference number: 2 (lower is better) Translates to: VSGHSIPPQTRPRCWPPINLGCE*CCLPVV Trigger: CACTACGGGAAGACAGCATCATTCACAACCAAGATT...TATCGGAGGCCAGCACCGAGGCCTTGTCTGAGGAGGAATGGAATGACCTGACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCTGGGCTACCCTCATGGCATTGGTGACAGCTCTTTTCATAGACGGGTAGATTGGCTGCAGGCTTTATaGTCCAGATGTTCCGGATCC | + |
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Preference number: 2 (lower is better) Translates to: VLGYPHGIGDSSFHRRVDWLQAL*SRCSGS Trigger: GGATCCGGAACATCTGGATCATAAAGCCTGCAGCCA...ATCTACCCGTCTATGAAAAGAGCTGTCACCAATGCCATGAGGGTAGCCCAGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCTGGGCTACCCTCATGGCATTGGTGACAGCTCTTTTCATAGACGGGTAGATTTCTGCAGGTACTCCTaGAAACGAGTGCTGGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: VLGYPHGIGDSSFHRRVDFCRYS*KRVLVH Trigger: GTGGACCAGCACTCGTTTCCAGGAGTACCTGCAGAA...ATCTACCCGTCTATGAAAAGAGCTGTCACCAATGCCATGAGGGTAGCCCAGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCTCCTCAGACAAGGCCTCGGTGCTGGCCTCCGATACGTCTATGTCTTCATGAATCTTGGTTGTGAATaGTGCTGTCTTCCCGTAGTG | + |
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Preference number: 2 (lower is better) Translates to: FLLRQGLGAGLRYVYVFMNLGCE*CCLPVV Trigger: CACTACGGGAAGACAGCATCATTCACAACCAAGATT...CATGAAGACATAGACGTATCGGAGGCCAGCACCGAGGCCTTGTCTGAGGAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR-3UTR TCA 90 bp | GCGCCGGAAGTCATCCAAGAATTCCTGCTTCTCGCTCTCAGTGCAAAGGCCATAGTCCAATCTTGGTTGTaGATGATGCTGTCTTCCCGT | + |
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Preference number: 2 (lower is better) Translates to: APEVIQEFLLLALSAKAIVQSWL*MMLSSR Trigger: ACGGGAAGACAGCATCATTCACAACCAAGATTGGAC...TATGGCCTTTGCACTGAGAGCGAGAAGCAGGAATTCTTGGATGACTTCCGGCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR-3UTR TCA 90 bp | CATGGTGGGGCTGGAGTTGATCTCGATAAGCCATGGCTTGAAGTCTCGCCCCAGTCTTACTCTTGCCCTTaGCTTTGCTGCAGTAATTCT | + |
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Preference number: 2 (lower is better) Translates to: HGGAGVDLDKPWLEVSPQSYSCP*LCCSNS Trigger: AGAATTACTGCAGCAAAGTCAAGGGCAAGAGTAAGA...CTGGGGCGAGACTTCAAGCCATGGCTTATCGAGATCAACTCCAGCCCCACCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCAAAGTTGCCGATGTCACAGTTTCGGTCCAGTTTGCGATCCACCACCACCTTTTCAGGATCTTTCTTaGGGCTGGGGTCACTGTTCT | + |
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Preference number: 2 (lower is better) Translates to: AQSCRCHSFGPVCDPPPPFQDLS*GWGHCS Trigger: AGAACAGTGACCCCAGCCCCAAGAAAGATCCTGAAA...AGGTGGTGGTGGATCGCAAACTGGACCGAAACTGTGACATCGGCAACTTTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR-3UTR CCA 90 bp | ATTTGCTTCTTGGCTTTCTTCACGCTGATACCTTCCACACAGAGGTCAGACCCGTGTTACACAGGTGGATaGCGCTGTCCAGCTTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: ICFLAFFTLIPSTQRSDPCYTGG*RCPACP Trigger: TGGACAAGCTGGACAGCGCCATCCACCTGTGTAACA...CGGGTCTGACCTCTGTGTGGAAGGTATCAGCGTGAAGAAAGCCAAGAAGCAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| 3UTR-3UTR CCA 90 bp | GGCATGGACCAAGTGGTTGAAAGTACCTTTGCTTCTTCCCGTTTCCAGTCCTGCTTTCAGGATCTTTCTTaGGGCTGGGGTCACTGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: GMDQVVESTFASSRFQSCFQDLS*GWGHCS Trigger: AGAACAGTGACCCCAGCCCCAAGAAAGATCCTGAAA...GCAGGACTGGAAACGGGAAGAAGCAAAGGTACTTTCAACCACTTGGTCCATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177254.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCCTGGGCTACCCTCATGGCATTGGTGACAGCTCTTTTCATAGACGGGTAGATGTCTCGATGTACTTCTaGACCACCCATTTGTTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: VLGYPHGIGDSSFHRRVDVSMYF*TTHLLS Trigger: GGACAACAAATGGGTGGTCCAGAAGTACATCGAGAC...ATCTACCCGTCTATGAAAAGAGCTGTCACCAATGCCATGAGGGTAGCCCAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCATGGACCAAGTGGTTGAAAGTACCTTTGCTTCTTCCCGTTTCCAGTCCTGCTTTTTGAGGCGCCTCTaGATGGAGTTGTTACACAGG | + |
|
Preference number: 2 (lower is better) Translates to: GMDQVVESTFASSRFQSCFLRRL*MELLHR Trigger: CCTGTGTAACAACTCCATCCAGAGGCGCCTCAAAAA...GCAGGACTGGAAACGGGAAGAAGCAAAGGTACTTTCAACCACTTGGTCCATGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177254.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTTGCTTCTTGGCTTTCTTCACGCTGATACCTTCCACACAGAGGTCAGACCCGGTCTCGATGTACTTCTaGACCACCCATTTGTTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: ICFLAFFTLIPSTQRSDPVSMYF*TTHLLS Trigger: GGACAACAAATGGGTGGTCCAGAAGTACATCGAGAC...CGGGTCTGACCTCTGTGTGGAAGGTATCAGCGTGAAGAAAGCCAAGAAGCAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTTGCTTCTTGGCTTTCTTCACGCTGATACCTTCCACACAGAGGTCAGACCCGACAGAAGCTCAAAGTTaGCGATGTCACAGTTTCGGT | + |
|
Preference number: 2 (lower is better) Translates to: ICFLAFFTLIPSTQRSDPTEAQS*RCHSFG Trigger: ACCGAAACTGTGACATCGGCAACTTTGAGCTTCTGT...CGGGTCTGACCTCTGTGTGGAAGGTATCAGCGTGAAGAAAGCCAAGAAGCAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTGCATCCATTACTGGCATGGACCAAGTGGTTGAAAGTACCTTTGCTTCTTCCACTCCTGGAAACGAGTaGTGGTCCACATGTTATGAC | + |
|
Preference number: 2 (lower is better) Translates to: SASITGMDQVVESTFASSTPGNE*WSTCYD Trigger: GTCATAACATGTGGACCAGCACTCGTTTCCAGGAGT...GGAAGAAGCAAAGGTACTTTCAACCACTTGGTCCATGCCAGTAATGGATGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177254.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGCATCCATTACTGGCATGGACCAAGTGGTTGAAAGTACCTTTGCTTCTTCCGTCGTAGATGAGCATTaGGGTCTCGATGTACTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: SASITGMDQVVESTFASSVVDEH*GLDVLL Trigger: CAGAAGTACATCGAGACCCCAATGCTCATCTACGAC...GGAAGAAGCAAAGGTACTTTCAACCACTTGGTCCATGCCAGTAATGGATGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177254.8 |
||
| 3UTR CCA 72 bp | TCATCCTGGTCCTCGTCGTGGGCTCCTCCAGCTGCCTaGCCGCCCACCGCCCCAGCAGCAGCAGAAGGCGCC | + |
|
Preference number: 3 (lower is better) Translates to: SSWSSSWAPPAA*PPTAPAAAEGA Trigger: GGCGCCTTCTGCTGCTGCTGGGGCGGTGGGCGGCCAGGCAGCTGGAGGAGCCCACGACGAGGACCAGGATGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177180.8 |
||
| 3UTR CCA 72 bp | TCGGTCCCGTCTTCATTCTCATCCTGGTCCTCGTCGTaGGCTCCTCCAGCTGCCTGGCCGCCCACCGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SVPSSFSSWSSS*APPAAWPPTAP Trigger: TGGGGCGGTGGGCGGCCAGGCAGCTGGAGGAGCCCACGACGAGGACCAGGATGAGAATGAAGACGGGACCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177180.8 |
||
| 3UTR CCA 72 bp | TCTGGGGGCGTCTCGGTCCCGTCTTCATTCTCATCCTaGTCCTCGTCGTGGGCTCCTCCAGCTGCCTGGCCG | + |
|
Preference number: 3 (lower is better) Translates to: SGGVSVPSSFSS*SSSWAPPAAWP Trigger: CGGCCAGGCAGCTGGAGGAGCCCACGACGAGGACCAGGATGAGAATGAAGACGGGACCGAGACGCCCCCAGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177180.8 |
||
| 3UTR CCA 72 bp | CACCTTGGCCAACATTACACCGCAGACCCTAGTGCCTaGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCT | + |
|
Preference number: 3 (lower is better) Translates to: HLGQHYTADPSA*LGQCQCCPRTP Trigger: AGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACTAGGGTCTGCGGTGTAATGTTGGCCAAGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| 3UTR GCA 72 bp | TCAGACCCGTTGAACGGTGGCAGCTCCACGGCAGGCTaGCGCCACAGAAGCTCAAAGTTGCCGATGTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: SDPLNGGSSTAG*RHRSSKLPMSQ Trigger: CTGTGACATCGGCAACTTTGAGCTTCTGTGGCGGCAGCCTGCCGTGGAGCTGCCACCGTTCAACGGGTCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR CCA 72 bp | TTCTTCCCGTTTCCAGTCCTGCCGCACGGTCGTTCTTaGAGGCCTGATCACTGTTTCCATCAGGGCCCGGGC | + |
|
Preference number: 3 (lower is better) Translates to: FFPFPVLPHGRS*RPDHCFHQGPG Trigger: GCCCGGGCCCTGATGGAAACAGTGATCAGGCCTCCAAGAACGACCGTGCGGCAGGACTGGAAACGGGAAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR CCA 72 bp | GGCGGGCGGAAGCCACAGCAAACTAGGCACGGCGCTTaGAGATCACACGGAAGCCCTTTGCTTCTTCCCGTT | + |
|
Preference number: 3 (lower is better) Translates to: GGRKPQQTRHGA*RSHGSPLLLPV Trigger: AACGGGAAGAAGCAAAGGGCTTCCGTGTGATCTCCAAGCGCCGTGCCTAGTTTGCTGTGGCTTCCGCCCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177180.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCGGTCCAGTTTGCGATCCACCACCACCTTGATGGTGTCCTCCTGCACCTGGATGGCGCTGTCCAGCTaGTCCAGGGAGAAGCGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: FRSSLRSTTTLMVSSCTWMALSS*SREKRC Trigger: ACAGCGCTTCTCCCTGGACAAGCTGGACAGCGCCAT...CCAGGTGCAGGAGGACACCATCAAGGTGGTGGTGGATCGCAAACTGGACCGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCGCTTGGAGATCACACGGAAGCCCTTTGCTTCTTCCCGTTTCCAGTCCTGCCCTGGGGTCACTGTTCTaGGCCTCCTCCTTCTTACTC | + |
|
Preference number: 3 (lower is better) Translates to: GAWRSHGSPLLLPVSSPALGSLF*ASSFLL Trigger: GAGTAAGAAGGAGGAGGCCAAGAACAGTGACCCCAG...GGCAGGACTGGAAACGGGAAGAAGCAAAGGGCTTCCGTGTGATCTCCAAGCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177180.8 |
||
| 3UTR GCA 72 bp | CATGCTCTAGCTGTCCCAGGTAGGCCTGGCACACCTTaGAAGCTGTGTCTACAACCTGTCCCGAGAGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: HALAVPGRPGTP*KLCLQPVPRGL Trigger: CAAGCCTCTCGGGACAGGTTGTAGACACAGCTTGCAAGGTGTGCCAGGCCTACCTGGGACAGCTAGAGCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR CCA 72 bp | GTGCATGGTGGGGCTGGAGTTGATCTCGATAAGCCATaGCTTGAAGTCTCGCCCCAGGATGAAGTCGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: VHGGAGVDLDKP*LEVSPQDEVGS Trigger: GGAGCCGACTTCATCCTGGGGCGAGACTTCAAGCCATGGCTTATCGAGATCAACTCCAGCCCCACCATGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR GCA 72 bp | GACCACCCATTTGTTGTCCTTTGTGGTCTGGCTGTCTaGGGCCACCAGACTCAGGATGTTCTCCACACGGTC | + |
|
Preference number: 3 (lower is better) Translates to: DHPFVVLCGLAV*GHQTQDVLHTV Trigger: GACCGTGTGGAGAACATCCTGAGTCTGGTGGCCGCAGACAGCCAGACCACAAAGGACAACAAATGGGTGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR GCA 72 bp | CTCGGCCCCTCTTCTGCAGGTACTCCTGGAAACGAGTaGTGGTCCACATGTTATGACAAGGTAGCAGCGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LGPSSAGTPGNE*WSTCYDKVAAD Trigger: GTCCGCTGCTACCTTGTCATAACATGTGGACCAGCACTCGTTTCCAGGAGTACCTGCAGAAGAGGGGCCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR GCA 72 bp | ACACGGAAGCCCTTTGCTTCTTCCCGTTTCCAGTCCTaGCGCACGGTCGTTCTTGGAGGCCTGATCACTGTT | + |
|
Preference number: 3 (lower is better) Translates to: TRKPFASSRFQS*RTVVLGGLITV Trigger: AACAGTGATCAGGCCTCCAAGAACGACCGTGCGGCAGGACTGGAAACGGGAAGAAGCAAAGGGCTTCCGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177180.8 |
||
| 3UTR CCA 72 bp | GGCCCCTCTTCTGCAGGTACTCCTGGAAACGAGTGCTaGTCCACATGTTATGACAAGGTAGCAGCGGACTGC | + |
|
Preference number: 3 (lower is better) Translates to: GPSSAGTPGNEC*STCYDKVAADC Trigger: GCAGTCCGCTGCTACCTTGTCATAACATGTGGACCAGCACTCGTTTCCAGGAGTACCTGCAGAAGAGGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGTTCTTACGGGCTTCTACGTGGTCCTGGGCTACCCTCATGGCATTGGTGACACCCATTTGTTGTCCTTaGTGGTCTGGCTGTCTGCGG | + |
|
Preference number: 3 (lower is better) Translates to: LFLRASTWSWATLMALVTPICCP*WSGCLR Trigger: CCGCAGACAGCCAGACCACAAAGGACAACAAATGGG...TGTCACCAATGCCATGAGGGTAGCCCAGGACCACGTAGAAGCCCGTAAGAACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTTGGAGGCCTGATCACTGTTTCCATCAGGGCCCGGGCACTCCGCACTTTGTTCTGGACCACCCATTaGTTGTCCTTTGTGGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VLGGLITVSIRARALRTLFWTTH*LSFVVW Trigger: CCAGACCACAAAGGACAACAAATGGGTGGTCCAGAA...CAAAGTGCGGAGTGCCCGGGCCCTGATGGAAACAGTGATCAGGCCTCCAAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCCTGGGCTACCCTCATGGCATTGGTGACAGCTCTTTTCATAGACGGGTAGATATGGCGCTGTCCAGCTaGTCCAGGGAGAAGCGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: VLGYPHGIGDSSFHRRVDMALSS*SREKRC Trigger: ACAGCGCTTCTCCCTGGACAAGCTGGACAGCGCCAT...ATCTACCCGTCTATGAAAAGAGCTGTCACCAATGCCATGAGGGTAGCCCAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR TCA 72 bp | CTTTGCTGCAGTAATTCTGGTGAAGGACTACCCACTTaGGGATGCTGGCAGCCACCGTGCGCCGGAAGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LCCSNSGEGLPT*GCWQPPCAGSH Trigger: ATGACTTCCGGCGCACGGTGGCTGCCAGCATCCTCAAGTGGGTAGTCCTTCACCAGAATTACTGCAGCAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR TCA 72 bp | GATCCAGCCCTGTGCCCTGCTTTGGAGAATACAGCTTaGAGGTCGTCTCTGAGAATTGGGGTGGAGCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: DPALCPALENTA*RSSLRIGVEPE Trigger: CTCTGGCTCCACCCCAATTCTCAGAGACGACCTTCAAGCTGTATTCTCCAAAGCAGGGCACAGGGCTGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177254.8 |
||
| 3UTR CCA 72 bp | TGGCGCTGTCCAGCTTGTCCAGGGAGAAGCGCTGTGTaGAGAAGCGGAGGTAGCTTTCTTTGTAGAACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: WRCPACPGRSAV*RSGGSFLCRTR Trigger: TCTGGTTCTACAAAGAAAGCTACCTCCGCTTCTCCACACAGCGCTTCTCCCTGGACAAGCTGGACAGCGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGGGCTGGAGTTGATCTCGATAAGCCATGGCTTGAAGTCTCGCCCCAGGATTCCTCCTTCTTACTCTaGCCCTTGACTTTGCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GGAGVDLDKPWLEVSPQDSSFLL*PLTLLQ Trigger: CTGCAGCAAAGTCAAGGGCAAGAGTAAGAAGGAGGA...ATCCTGGGGCGAGACTTCAAGCCATGGCTTATCGAGATCAACTCCAGCCCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR CCA 72 bp | GGTCATTCCATTCCTCCTCAGACAAGGCCTCGGTGCTaGCCTCCGATACGTCTATGTCTTCATGCTCTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: GHSIPPQTRPRC*PPIRLCLHALA Trigger: AGCTAGAGCATGAAGACATAGACGTATCGGAGGCCAGCACCGAGGCCTTGTCTGAGGAGGAATGGAATGACC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR CCA 72 bp | TACTTCTGGACCACCCATTTGTTGTCCTTTGTGGTCTaGCTGTCTGCGGCCACCAGACTCAGGATGTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: YFWTTHLLSFVV*LSAATRLRMFS Trigger: GGAGAACATCCTGAGTCTGGTGGCCGCAGACAGCCAGACCACAAAGGACAACAAATGGGTGGTCCAGAAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR CCA 72 bp | AGCTCGAAGCTGTTCTTACGGGCTTCTACGTGGTCCTaGGCTACCCTCATGGCATTGGTGACAGCTCTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: SSKLFLRASTWS*ATLMALVTALF Trigger: GAAAAGAGCTGTCACCAATGCCATGAGGGTAGCCCAGGACCACGTAGAAGCCCGTAAGAACAGCTTCGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGGTGGGGCTGGAGTTGATCTCGATAAGCCATGGCTTGAAGTCTCGCCCCAGCTTACTCAGCAGAGCTaGGCATTGCGCAAAGTAACT | + |
|
Preference number: 3 (lower is better) Translates to: HGGAGVDLDKPWLEVSPQLTQQS*ALRKVT Trigger: AGTTACTTTGCGCAATGCCAAGCTCTGCTGAGTAAG...CTGGGGCGAGACTTCAAGCCATGGCTTATCGAGATCAACTCCAGCCCCACCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR GCA 72 bp | AAACCCCACTGGGACTATTGCAATAGGACCCAAGTATaGTGCTCACCTTGGCCAACATTACACCGCAGACCC | + |
|
Preference number: 3 (lower is better) Translates to: KPHWDYCNRTQV*CSPWPTLHRRP Trigger: GGGTCTGCGGTGTAATGTTGGCCAAGGTGAGCAGCATACTTGGGTCCTATTGCAATAGTCCCAGTGGGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| 3UTR GCA 72 bp | TCAGGTCATTCCATTCCTCCTCAGACAAGGCCTCGGTaGTGGCCTCCGATACGTCTATGTCTTCATGCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: SGHSIPPQTRPR*WPPIRLCLHAL Trigger: TAGAGCATGAAGACATAGACGTATCGGAGGCCAGCACCGAGGCCTTGTCTGAGGAGGAATGGAATGACCTGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR CCA 72 bp | AAAGGCCATAGCACCGTGGGAAGAAGGTGTTCGGGTTaGCTTGGACGTACCAAGGCAGACTTCTCATGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: KGHSTVGRRCSG*LGRTKADFSCS Trigger: TGAACATGAGAAGTCTGCCTTGGTACGTCCAAGCCAACCCGAACACCTTCTTCCCACGGTGCTATGGCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR CCA 72 bp | GTGGAGCATCTAAGAGTGATTCTGAGAGGCCGACGCTaGCAATGGGCGGCATTTGCTTCTTGGCTTTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: VEHLRVILRGRR*QWAAFASWLSS Trigger: TGAAGAAAGCCAAGAAGCAAATGCCGCCCATTGCCAGCGTCGGCCTCTCAGAATCACTCTTAGATGCTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCATGGACCAAGTGGTTGAAAGTACCTTTGCTTCTTCCCGTTTCCAGTCCTGCGGCAATGGGCGGCATTaGCTTCTTGGCTTTCTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: GMDQVVESTFASSRFQSCGNGRH*LLGFLH Trigger: GTGAAGAAAGCCAAGAAGCAAATGCCGCCCATTGCC...GCAGGACTGGAAACGGGAAGAAGCAAAGGTACTTTCAACCACTTGGTCCATGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177254.8 |
||
| 3UTR-3UTR CAA 90 bp | GCATGGACCAAGTGGTTGAAAGTACCTTTGCTTCTTCCCGTTTCCAGTCCTGCCTCCTCCTTCTTACTCTaGCCCTTGACTTTGCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: AWTKWLKVPLLLPVSSPASSFLL*PLTLLQ Trigger: CTGCAGCAAAGTCAAGGGCAAGAGTAAGAAGGAGGA...GGCAGGACTGGAAACGGGAAGAAGCAAAGGTACTTTCAACCACTTGGTCCATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177254.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCCTGGGCTACCCTCATGGCATTGGTGACAGCTCTTTTCATAGACGGGTAGATGAGAGGCTTGGTAGCTaGAGGTCAGGATTTTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VLGYPHGIGDSSFHRRVDERLGS*RSGFSG Trigger: TCCTGAAAATCCTGACCTCAAGCTACCAAGCCTCTC...ATCTACCCGTCTATGAAAAGAGCTGTCACCAATGCCATGAGGGTAGCCCAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCATGGACCAAGTGGTTGAAAGTACCTTTGCTTCTTCCCGTTTCCAGTCCTGCTTCTGGACCACCCATTaGTTGTCCTTTGTGGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GMDQVVESTFASSRFQSCFWTTH*LSFVVW Trigger: CCAGACCACAAAGGACAACAAATGGGTGGTCCAGAA...GCAGGACTGGAAACGGGAAGAAGCAAAGGTACTTTCAACCACTTGGTCCATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177254.8 |
||
| 3UTR TCA 72 bp | GACAAGGTAGCAGCGGACTGCGCTCTTTATCATTTTTaGGGCGCCTCTGGATGGAGTTGTTACACAGGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: DKVAADCALYHF*GASGWSCYTGG Trigger: TCCACCTGTGTAACAACTCCATCCAGAGGCGCCTCAAAAATGATAAAGAGCGCAGTCCGCTGCTACCTTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTTGCTTCTTGGCTTTCTTCACGCTGATACCTTCCACACAGAGGTCAGACCCGGAGAGGCTTGGTAGCTaGAGGTCAGGATTTTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: ICFLAFFTLIPSTQRSDPERLGS*RSGFSG Trigger: TCCTGAAAATCCTGACCTCAAGCTACCAAGCCTCTC...CGGGTCTGACCTCTGTGTGGAAGGTATCAGCGTGAAGAAAGCCAAGAAGCAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCCTGGGCTACCCTCATGGCATTGGTGACAGCTCTTTTCATAGACGGGTAGATCTTACTCAGCAGAGCTaGGCATTGCGCAAAGTAACT | + |
|
Preference number: 3 (lower is better) Translates to: VLGYPHGIGDSSFHRRVDLTQQS*ALRKVT Trigger: AGTTACTTTGCGCAATGCCAAGCTCTGCTGAGTAAG...ATCTACCCGTCTATGAAAAGAGCTGTCACCAATGCCATGAGGGTAGCCCAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR TCA 72 bp | GGATCCCATCGATCTCTGTCTGAGGGTTCACAGAACTaGTCTTACTCAGCAGAGCTTGGCATTGCGCAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: GSHRSLSEGSQN*SYSAELGIAQS Trigger: ACTTTGCGCAATGCCAAGCTCTGCTGAGTAAGATCAGTTCTGTGAACCCTCAGACAGAGATCGATGGGATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR TCA 72 bp | GCCCTGCTTTGGAGAATACAGCTTGAAGGTCGTCTCTaGGAATTGGGGTGGAGCCAGAGTTCCTCAAATACA | + |
|
Preference number: 3 (lower is better) Translates to: ALLWRIQLEGRL*ELGWSQSSSNT Trigger: TGTATTTGAGGAACTCTGGCTCCACCCCAATTCTCAGAGACGACCTTCAAGCTGTATTCTCCAAAGCAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177254.8 |
||
| 3UTR CCA 72 bp | GCTGTGCACTTGTTAAGGTTACCCCTGGGACTTTACTaGATTGGACTCTGGTATAACCGCTCTTGTGGGACT | + |
|
Preference number: 3 (lower is better) Translates to: AVHLLRLPLGLY*IGLWYNRSCGT Trigger: AGTCCCACAAGAGCGGTTATACCAGAGTCCAATCCAGTAAAGTCCCAGGGGTAACCTTAACAAGTGCACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177254.8 |
||
| 3UTR TCA 72 bp | ATGATCCAGATGTTCCGGATCCCATCGATCTCTGTCTaGGGGTTCACAGAACTGATCTTACTCAGCAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: MIQMFRIPSISV*GFTELILLSRA Trigger: AGCTCTGCTGAGTAAGATCAGTTCTGTGAACCCTCAGACAGAGATCGATGGGATCCGGAACATCTGGATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR TCA 72 bp | AGGTACTCCTGGAAACGAGTGCTGGTCCACATGTTATaGCAAGGTAGCAGCGGACTGCGCTCTTTATCATTT | + |
|
Preference number: 3 (lower is better) Translates to: RYSWKRVLVHML*QGSSGLRSLSF Trigger: AAATGATAAAGAGCGCAGTCCGCTGCTACCTTGTCATAACATGTGGACCAGCACTCGTTTCCAGGAGTACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR CCA 72 bp | GAGAATTGGGGTGGAGCCAGAGTTCCTCAAATACAATaGGACAGAAAGGCGAAGAGTCTCTATGGTTACCTG | + |
|
Preference number: 3 (lower is better) Translates to: ENWGGARVPQIQ*DRKAKSLYGYL Trigger: CAGGTAACCATAGAGACTCTTCGCCTTTCTGTCCCATTGTATTTGAGGAACTCTGGCTCCACCCCAATTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177254.8 |
||
| 3UTR CCA 72 bp | TTTGGAGAATACAGCTTGAAGGTCGTCTCTGAGAATTaGGGTGGAGCCAGAGTTCCTCAAATACAATGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: FGEYSLKVVSEN*GGARVPQIQWD Trigger: GTCCCATTGTATTTGAGGAACTCTGGCTCCACCCCAATTCTCAGAGACGACCTTCAAGCTGTATTCTCCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177254.8 |
||
| 3UTR CCA 72 bp | TTAAGGTTACCCCTGGGACTTTACTGGATTGGACTCTaGTATAACCGCTCTTGTGGGACTTATTGTCTACAT | + |
|
Preference number: 3 (lower is better) Translates to: LRLPLGLYWIGL*YNRSCGTYCLH Trigger: ATGTAGACAATAAGTCCCACAAGAGCGGTTATACCAGAGTCCAATCCAGTAAAGTCCCAGGGGTAACCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177254.8 |
||
| CDS-3UTR TCA 90 bp | AGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCCTCACCTGGGCACAGAGCTaGGCTGTGACGGGAGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SAWLGQCQCCPRTPCEILTWAQS*AVTGVE Trigger: CTCCACTCCCGTCACAGCTCAGCTCTGTGCCCAGGT...GAGGATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR CCA 90 bp | CGTTCCTCCTCGGCCCCTCTTCTGCAGGTACTCCTGGAAACGAGTGCTGGTCCACGGAGGACCCGGGTGTaGGAGGGAGGCCTGAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RSSSAPLLQVLLETSAGPRRTRV*EGGLKG Trigger: TCCTTTCAGGCCTCCCTCCCACACCCGGGTCCTCCG...TGGACCAGCACTCGTTTCCAGGAGTACCTGCAGAAGAGGGGCCGAGGAGGAACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| CDS-3UTR TCA 90 bp | AGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCCTCGAAGGACTACCCACTTaGGGATGCTGGCAGCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: SAWLGQCQCCPRTPCEILEGLPT*GCWQPP Trigger: CGGTGGCTGCCAGCATCCTCAAGTGGGTAGTCCTTC...GAGGATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| 3UTR CAA 72 bp | TTCACGCTGATACCTTCCACACAGAGGTCAGACCCGTaGAACGGTGGCAGCTCCACGGCAGGCTGCCGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FTLIPSTQRSDP*NGGSSTAGCRH Trigger: GTGGCGGCAGCCTGCCGTGGAGCTGCCACCGTTCAACGGGTCTGACCTCTGTGTGGAAGGTATCAGCGTGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| CDS-3UTR TCA 90 bp | CCTAGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCGATCCACCACCACCTTaGTGGTGTCCTCCTGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: PSAWLGQCQCCPRTPCEIDPPPP*WCPPAP Trigger: AGGTGCAGGAGGACACCATCAAGGTGGTGGTGGATC...GATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACTAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR CCA 90 bp | CATGGTGGGGCTGGAGTTGATCTCGATAAGCCATGGCTTGAAGTCTCGCCCCAGCGGAGGACCCGGGTGTaGGAGGGAGGCCTGAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HGGAGVDLDKPWLEVSPQRRTRV*EGGLKG Trigger: TCCTTTCAGGCCTCCCTCCCACACCCGGGTCCTCCG...CTGGGGCGAGACTTCAAGCCATGGCTTATCGAGATCAACTCCAGCCCCACCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| CDS-3UTR TCA 90 bp | GTGCATGGTGGGGCTGGAGTTGATCTCGATAAGCCATGGCTTGAAGTCTCGCCCTGTGGGAGGGAGGCCTaGAAGGAGGGTTTGGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: VHGGAGVDLDKPWLEVSPCGREA*KEGLGS Trigger: CGACCCCAAACCCTCCTTTCAGGCCTCCCTCCCACA...GGGCGAGACTTCAAGCCATGGCTTATCGAGATCAACTCCAGCCCCACCATGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177180.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCCTCGGGAGAAGCGCTGTGTaGAGAAGCGGAGGTAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SAWLGQCQCCPRTPCEILGRSAV*RSGGSF Trigger: AAAGCTACCTCCGCTTCTCCACACAGCGCTTCTCCC...GAGGATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR TCA 90 bp | CCTAGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCTGGCTGCAGGCTTTATaGTCCAGATGTTCCGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: PSAWLGQCQCCPRTPCEIWLQAL*SRCSGS Trigger: GGATCCGGAACATCTGGATCATAAAGCCTGCAGCCA...GATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACTAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR GCA 90 bp | AGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCCTCTCCAGCCCTGTGCCCTaGTTTGGAGAATACAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SAWLGQCQCCPRTPCEILSSPVP*FGEYSL Trigger: CAAGCTGTATTCTCCAAAGCAGGGCACAGGGCTGGA...GAGGATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR GCA 90 bp | AGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCCTCCCTGATCCAGCCCTGTaGCCTGCTTTGGAGAATACA | + |
|
Preference number: 4 (lower is better) Translates to: SAWLGQCQCCPRTPCEILPDPAL*PALENT Trigger: TGTATTCTCCAAAGCAGGGCACAGGGCTGGATCAGG...GAGGATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR CCA 90 bp | CCTAGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCGATCTTTCTTGGGGCTaGGGTCACTGTTCTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSAWLGQCQCCPRTPCEIDLSWG*GHCSWP Trigger: AGGCCAAGAACAGTGACCCCAGCCCCAAGAAAGATC...GATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACTAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR CCA 90 bp | CCTAGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCTGTTACACAGGTGGATaGCGCTGTCCAGCTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSAWLGQCQCCPRTPCEICYTGG*RCPACP Trigger: TGGACAAGCTGGACAGCGCCATCCACCTGTGTAACA...GATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACTAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR CCA 90 bp | CCTAGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCTTCTGCAGGTACTCCTaGAAACGAGTGCTGGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSAWLGQCQCCPRTPCEIFCRYS*KRVLVH Trigger: GTGGACCAGCACTCGTTTCCAGGAGTACCTGCAGAA...GATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACTAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR CCA 90 bp | CCTAGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCGTCGTCTCTGAGAATTaGGGTGGAGCCAGAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSAWLGQCQCCPRTPCEIVVSEN*GGARVP Trigger: AGGAACTCTGGCTCCACCCCAATTCTCAGAGACGAC...GATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACTAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR CCA 90 bp | AACCCCACTGGGACTATTGCAATAGGACCCAAGTATGCTGCTCACCTTGGCCAACGGAGGACCCGGGTGTaGGAGGGAGGCCTGAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NPTGTIAIGPKYAAHLGQRRTRV*EGGLKG Trigger: TCCTTTCAGGCCTCCCTCCCACACCCGGGTCCTCCG...TTGGCCAAGGTGAGCAGCATACTTGGGTCCTATTGCAATAGTCCCAGTGGGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCCTCTGGGGTCACTGTTCTTaGCCTCCTCCTTCTTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SAWLGQCQCCPRTPCEILWGHCS*PPPSYS Trigger: AGAGTAAGAAGGAGGAGGCCAAGAACAGTGACCCCA...GAGGATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR CCA 90 bp | CCTAGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCCCCTGTGCCCTGCTTTaGAGAATACAGCTTGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSAWLGQCQCCPRTPCEIPCALL*RIQLEG Trigger: ACCTTCAAGCTGTATTCTCCAAAGCAGGGCACAGGG...GATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACTAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR TCA 90 bp | AACCCCACTGGGACTATTGCAATAGGACCCAAGTATGCTGCTCACCTTGGCCAATGTGGGAGGGAGGCCTaGAAGGAGGGTTTGGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: NPTGTIAIGPKYAAHLGQCGREA*KEGLGS Trigger: CGACCCCAAACCCTCCTTTCAGGCCTCCCTCCCACA...TTGGCCAAGGTGAGCAGCATACTTGGGTCCTATTGCAATAGTCCCAGTGGGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR TCA 90 bp | CACGTTCCTCCTCGGCCCCTCTTCTGCAGGTACTCCTGGAAACGAGTGCTGGTCGCCCCCAACCCCTGTTaGCAAAGATTTAGAGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HVPPRPLFCRYSWKRVLVAPNPC*QRFRVQ Trigger: CTGAACTCTAAATCTTTGTCAACAGGGGTTGGGGGC...GACCAGCACTCGTTTCCAGGAGTACCTGCAGAAGAGGGGCCGAGGAGGAACGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| CDS-3UTR TCA 90 bp | CGTTCCTCCTCGGCCCCTCTTCTGCAGGTACTCCTGGAAACGAGTGCTGGTCCAGCCCCCAACCCCTGTTaGCAAAGATTTAGAGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSSSAPLLQVLLETSAGPAPNPC*QRFRVQ Trigger: CTGAACTCTAAATCTTTGTCAACAGGGGTTGGGGGC...TGGACCAGCACTCGTTTCCAGGAGTACCTGCAGAAGAGGGGCCGAGGAGGAACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| CDS-3UTR TCA 90 bp | AGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCCTCGTCCAATCTTGGTTGTaGATGATGCTGTCTTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SAWLGQCQCCPRTPCEILVQSWL*MMLSSR Trigger: ACGGGAAGACAGCATCATTCACAACCAAGATTGGAC...GAGGATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR TCA 90 bp | CCTAGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCGCTCTTTATCATTTTTaGGGCGCCTCTGGATGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSAWLGQCQCCPRTPCEIALYHF*GASGWS Trigger: ACTCCATCCAGAGGCGCCTCAAAAATGATAAAGAGC...GATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCCTCTTTCAGGATCTTTCTTaGGGCTGGGGTCACTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SAWLGQCQCCPRTPCEILFQDLS*GWGHCS Trigger: AGAACAGTGACCCCAGCCCCAAGAAAGATCCTGAAA...GAGGATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR CCA 90 bp | CCTAGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCGTCTCGATGTACTTCTaGACCACCCATTTGTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSAWLGQCQCCPRTPCEIVSMYF*TTHLLS Trigger: GGACAACAAATGGGTGGTCCAGAAGTACATCGAGAC...GATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR CCA 90 bp | CCTAGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCGTCGTAGATGAGCATTaGGGTCTCGATGTACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSAWLGQCQCCPRTPCEIVVDEH*GLDVLL Trigger: CAGAAGTACATCGAGACCCCAATGCTCATCTACGAC...GATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR CCA 90 bp | CCTAGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCTTTTTGAGGCGCCTCTaGATGGAGTTGTTACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSAWLGQCQCCPRTPCEIFLRRL*MELLHR Trigger: CCTGTGTAACAACTCCATCCAGAGGCGCCTCAAAAA...GATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR TCA 90 bp | CCTAGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCAATCTTGGTTGTGAATaGTGCTGTCTTCCCGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSAWLGQCQCCPRTPCEINLGCE*CCLPVV Trigger: CACTACGGGAAGACAGCATCATTCACAACCAAGATT...GATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCCTCCTCCATCTGACAAAGTaGAAGACAGCTTCTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SAWLGQCQCCPRTPCEILLHLTK*KTASSS Trigger: AGAGGAAGAAGCTGTCTTCCACTTTGTCAGATGGAG...GAGGATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109371.8 ENSMUST00000177254.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCCTCAGTCCAGAGGAGGTATaGGATCTCGTTCTTTACCAA | + |
|
Preference number: 4 (lower is better) Translates to: SAWLGQCQCCPRTPCEILSPEEV*DLVLYQ Trigger: TTGGTAAAGAACGAGATCCCATACCTCCTCTGGACT...GAGGATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109371.8 ENSMUST00000177254.8 |
||
| CDS-3UTR CCA 90 bp | CCTAGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCCTTTGTAGAACCAGATaGTTAGGGGATTCCAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSAWLGQCQCCPRTPCEILCRTR*LGDSSL Trigger: CAGACTGGAATCCCCTAACCATCTGGTTCTACAAAG...GATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| 3UTR CAA 72 bp | GCCATAGCACCGTGGGAAGAAGGTGTTCGGGTTGGCTaGGACGTACCAAGGCAGACTTCTCATGTTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AIAPWEEGVRVG*DVPRQTSHVQA Trigger: TGCCTGAACATGAGAAGTCTGCCTTGGTACGTCCAAGCCAACCCGAACACCTTCTTCCCACGGTGCTATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| CDS-3UTR TCA 90 bp | CCTAGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCTTTGTGATCTCCATCTaGCAAAGTGGAAGACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSAWLGQCQCCPRTPCEIFVISI*QSGRQL Trigger: AAGCTGTCTTCCACTTTGTCAGATGGAGATCACAAA...GATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACTAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109371.8 ENSMUST00000177254.8 |
||
| CDS-3UTR TCA 90 bp | AGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCCTCTCTTACTCTTGCCCTTaGCTTTGCTGCAGTAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SAWLGQCQCCPRTPCEILSYSCP*LCCSNS Trigger: AGAATTACTGCAGCAAAGTCAAGGGCAAGAGTAAGA...GAGGATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR TCA 90 bp | AGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCCTCTTGGAGAATACAGCTTaGAGGTCGTCTCTGAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: SAWLGQCQCCPRTPCEILLENTA*RSSLRI Trigger: AATTCTCAGAGACGACCTTCAAGCTGTATTCTCCAA...GAGGATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR GCA 90 bp | AACCCCACTGGGACTATTGCAATAGGACCCAAGTATGCTGCTCACCTTGGCCAACCTCGGCCCCTCTTCTaGAGGTACTCCTGGAAACGA | + |
|
Preference number: 4 (lower is better) Translates to: NPTGTIAIGPKYAAHLGQPRPLF*RYSWKR Trigger: TCGTTTCCAGGAGTACCTGCAGAAGAGGGGCCGAGG...TTGGCCAAGGTGAGCAGCATACTTGGGTCCTATTGCAATAGTCCCAGTGGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| 3UTR CAA 72 bp | TCTCGATGTACTTCTGGACCACCCATTTGTTGTCCTTaGTGGTCTGGCTGTCTGCGGCCACCAGACTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRCTSGPPICCP*WSGCLRPPDSG Trigger: TCCTGAGTCTGGTGGCCGCAGACAGCCAGACCACAAAGGACAACAAATGGGTGGTCCAGAAGTACATCGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR CAA 72 bp | AGCTCAAAGTTGCCGATGTCACAGTTTCGGTCCAGTTaGCGATCCACCACCACCTTGATGGTGTCCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSKLPMSQFRSS*RSTTTLMVSSC Trigger: GCAGGAGGACACCATCAAGGTGGTGGTGGATCGCAAACTGGACCGAAACTGTGACATCGGCAACTTTGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| CDS-3UTR TCA 90 bp | CCTAGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCTCCAAGGCTATTTCTTaGTTTTCTTTGGTCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSAWLGQCQCCPRTPCEISKAIS*FSLVSA Trigger: TGCTGAGACCAAAGAAAATCAAGAAATAGCCTTGGA...GATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109371.8 ENSMUST00000177254.8 |
||
| CDS-3UTR CCA 90 bp | CGGAAGCCCTTTGCTTCTTCCCGTTTCCAGTCCTGCCGCACGGTCGTTCTTGGAAGTCCAGAGGAGGTATaGGATCTCGTTCTTTACCAA | + |
|
Preference number: 4 (lower is better) Translates to: RKPFASSRFQSCRTVVLGSPEEV*DLVLYQ Trigger: TTGGTAAAGAACGAGATCCCATACCTCCTCTGGACT...TCCAAGAACGACCGTGCGGCAGGACTGGAAACGGGAAGAAGCAAAGGGCTTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177180.8 |
||
| 3UTR CAA 72 bp | GCTGTGTCTACAACCTGTCCCGAGAGGCTTGGTAGCTaGAGGTCAGGATTTTCAGGATCTTTCTTGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AVSTTCPERLGS*RSGFSGSFLGL Trigger: CAGCCCCAAGAAAGATCCTGAAAATCCTGACCTCAAGCTACCAAGCCTCTCGGGACAGGTTGTAGACACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| CDS-3UTR TCA 90 bp | CCTAGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCAAATCTTCCTCTCCTTaGTGGCTTTTTCTGTTAACT | + |
|
Preference number: 4 (lower is better) Translates to: PSAWLGQCQCCPRTPCEIKSSSP*WLFLLT Trigger: AGTTAACAGAAAAAGCCATCAAGGAGAGGAAGATTT...GATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000109371.8 ENSMUST00000177254.8 |
||
| CDS-3UTR TCA 90 bp | AACCCCACTGGGACTATTGCAATAGGACCCAAGTATGCTGCTCACCTTGGCCAAGCTTTGCTCGACCTCTaGCCTCTGCATCCATTACTG | + |
|
Preference number: 4 (lower is better) Translates to: NPTGTIAIGPKYAAHLGQALLDL*PLHPLL Trigger: CAGTAATGGATGCAGAGGTCAGAGGTCGAGCAAAGC...TTGGCCAAGGTGAGCAGCATACTTGGGTCCTATTGCAATAGTCCCAGTGGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR GCA 90 bp | AACCCCACTGGGACTATTGCAATAGGACCCAAGTATGCTGCTCACCTTGGCCAAGGGTTTCATAGTCTGTaGAAACAGGGCAGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NPTGTIAIGPKYAAHLGQGFHSL*KQGRVL Trigger: CAGCACCCTGCCCTGTTTGCACAGACTATGAAACCC...TTGGCCAAGGTGAGCAGCATACTTGGGTCCTATTGCAATAGTCCCAGTGGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR CCA 90 bp | CATGGTGGGGCTGGAGTTGATCTCGATAAGCCATGGCTTGAAGTCTCGCCCCAGCTCCATCTGACAAAGTaGAAGACAGCTTCTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HGGAGVDLDKPWLEVSPQLHLTK*KTASSS Trigger: AGAGGAAGAAGCTGTCTTCCACTTTGTCAGATGGAG...CTGGGGCGAGACTTCAAGCCATGGCTTATCGAGATCAACTCCAGCCCCACCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| CDS-3UTR TCA 90 bp | AACCCCACTGGGACTATTGCAATAGGACCCAAGTATGCTGCTCACCTTGGCCAAGCCCCCAACCCCTGTTaGCAAAGATTTAGAGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NPTGTIAIGPKYAAHLGQAPNPC*QRFRVQ Trigger: CTGAACTCTAAATCTTTGTCAACAGGGGTTGGGGGC...TTGGCCAAGGTGAGCAGCATACTTGGGTCCTATTGCAATAGTCCCAGTGGGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR TCA 90 bp | CATGGTGGGGCTGGAGTTGATCTCGATAAGCCATGGCTTGAAGTCTCGCCCCAGTTTGTGATCTCCATCTaGCAAAGTGGAAGACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HGGAGVDLDKPWLEVSPQFVISI*QSGRQL Trigger: AAGCTGTCTTCCACTTTGTCAGATGGAGATCACAAA...CTGGGGCGAGACTTCAAGCCATGGCTTATCGAGATCAACTCCAGCCCCACCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| CDS-3UTR GCA 90 bp | AACCCCACTGGGACTATTGCAATAGGACCCAAGTATGCTGCTCACCTTGGCCAAGCAATGGGCGGCATTTaGTTCTTGGCTTTCTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: NPTGTIAIGPKYAAHLGQAMGGI*FLAFFT Trigger: CGTGAAGAAAGCCAAGAAGCAAATGCCGCCCATTGC...TTGGCCAAGGTGAGCAGCATACTTGGGTCCTATTGCAATAGTCCCAGTGGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTCCTCAGACAAGGCCTCGGTGCTGGCCTCCGATACGTCTATGTCTTCATGTTTGTGATCTCCATCTaGCAAAGTGGAAGACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FLLRQGLGAGLRYVYVFMFVISI*QSGRQL Trigger: AAGCTGTCTTCCACTTTGTCAGATGGAGATCACAAA...CATGAAGACATAGACGTATCGGAGGCCAGCACCGAGGCCTTGTCTGAGGAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| CDS-3UTR TCA 90 bp | TTTCGGTCCAGTTTGCGATCCACCACCACCTTGATGGTGTCCTCCTGCACCTGGTCCAAGGCTATTTCTTaGTTTTCTTTGGTCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FRSSLRSTTTLMVSSCTWSKAIS*FSLVSA Trigger: TGCTGAGACCAAAGAAAATCAAGAAATAGCCTTGGA...CCAGGTGCAGGAGGACACCATCAAGGTGGTGGTGGATCGCAAACTGGACCGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| CDS-3UTR GCA 90 bp | AACCCCACTGGGACTATTGCAATAGGACCCAAGTATGCTGCTCACCTTGGCCAAACTCCTGGAAACGAGTaGTGGTCCACATGTTATGAC | + |
|
Preference number: 4 (lower is better) Translates to: NPTGTIAIGPKYAAHLGQTPGNE*WSTCYD Trigger: GTCATAACATGTGGACCAGCACTCGTTTCCAGGAGT...TTGGCCAAGGTGAGCAGCATACTTGGGTCCTATTGCAATAGTCCCAGTGGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR CCA 90 bp | GCTCAAAGTTGCCGATGTCACAGTTTCGGTCCAGTTTGCGATCCACCACCACCTAGTCCAGAGGAGGTATaGGATCTCGTTCTTTACCAA | + |
|
Preference number: 4 (lower is better) Translates to: AQSCRCHSFGPVCDPPPPSPEEV*DLVLYQ Trigger: TTGGTAAAGAACGAGATCCCATACCTCCTCTGGACT...AGGTGGTGGTGGATCGCAAACTGGACCGAAACTGTGACATCGGCAACTTTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| CDS-3UTR GCA 90 bp | AACCCCACTGGGACTATTGCAATAGGACCCAAGTATGCTGCTCACCTTGGCCAAACAGAAGCTCAAAGTTaGCGATGTCACAGTTTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: NPTGTIAIGPKYAAHLGQTEAQS*RCHSFG Trigger: ACCGAAACTGTGACATCGGCAACTTTGAGCTTCTGT...TTGGCCAAGGTGAGCAGCATACTTGGGTCCTATTGCAATAGTCCCAGTGGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR CCA 90 bp | AACCCCACTGGGACTATTGCAATAGGACCCAAGTATGCTGCTCACCTTGGCCAACATCCATTACTGGCATaGACCAAGTGGTTGAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: NPTGTIAIGPKYAAHLGQHPLLA*TKWLKV Trigger: TACTTTCAACCACTTGGTCCATGCCAGTAATGGATG...TTGGCCAAGGTGAGCAGCATACTTGGGTCCTATTGCAATAGTCCCAGTGGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR CCA 90 bp | AACCCCACTGGGACTATTGCAATAGGACCCAAGTATGCTGCTCACCTTGGCCAAGTTCCTCAAATACAATaGGACAGAAAGGCGAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NPTGTIAIGPKYAAHLGQVPQIQ*DRKAKS Trigger: ACTCTTCGCCTTTCTGTCCCATTGTATTTGAGGAAC...TTGGCCAAGGTGAGCAGCATACTTGGGTCCTATTGCAATAGTCCCAGTGGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR TCA 90 bp | GCTCAAAGTTGCCGATGTCACAGTTTCGGTCCAGTTTGCGATCCACCACCACCTAAATCTTCCTCTCCTTaGTGGCTTTTTCTGTTAACT | + |
|
Preference number: 4 (lower is better) Translates to: AQSCRCHSFGPVCDPPPPKSSSP*WLFLLT Trigger: AGTTAACAGAAAAAGCCATCAAGGAGAGGAAGATTT...AGGTGGTGGTGGATCGCAAACTGGACCGAAACTGTGACATCGGCAACTTTGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| CDS-3UTR TCA 90 bp | AGGATCTTTCTTGGGGCTGGGGTCACTGTTCTTGGCCTCCTCCTTCTTACTCTTAAATCTTCCTCTCCTTaGTGGCTTTTTCTGTTAACT | + |
|
Preference number: 4 (lower is better) Translates to: RIFLGAGVTVLGLLLLTLKSSSP*WLFLLT Trigger: AGTTAACAGAAAAAGCCATCAAGGAGAGGAAGATTT...AAGAGTAAGAAGGAGGAGGCCAAGAACAGTGACCCCAGCCCCAAGAAAGATCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGGGTTCACAGAACTGATCTTACTCAGCAGAGCTTGGCATTGCGCAAAGTATCCAAGGCTATTTCTTaGTTTTCTTTGGTCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRVHRTDLTQQSLALRKVSKAIS*FSLVSA Trigger: TGCTGAGACCAAAGAAAATCAAGAAATAGCCTTGGA...TACTTTGCGCAATGCCAAGCTCTGCTGAGTAAGATCAGTTCTGTGAACCCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR CAA 72 bp | GTTCACAGAACTGATCTTACTCAGCAGAGCTTGGCATaGCGCAAAGTAACTTTTCGAATCAGTGATGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VHRTDLTQQSLA*RKVTFRISDGS Trigger: GCTTCCATCACTGATTCGAAAAGTTACTTTGCGCAATGCCAAGCTCTGCTGAGTAAGATCAGTTCTGTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| 3UTR CAA 72 bp | CTGAGGGTTCACAGAACTGATCTTACTCAGCAGAGCTaGGCATTGCGCAAAGTAACTTTTCGAATCAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LRVHRTDLTQQS*ALRKVTFRISD Trigger: ATCACTGATTCGAAAAGTTACTTTGCGCAATGCCAAGCTCTGCTGAGTAAGATCAGTTCTGTGAACCCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| CDS-3UTR CAA 90 bp | CCTAGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCATGGCGCTGTCCAGCTaGTCCAGGGAGAAGCGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PSAWLGQCQCCPRTPCEIMALSS*SREKRC Trigger: ACAGCGCTTCTCCCTGGACAAGCTGGACAGCGCCAT...GATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACTAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR CAA 90 bp | AGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCCTCCGATCCACCACCACCTaGATGGTGTCCTCCTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: SAWLGQCQCCPRTPCEILRSTTT*MVSSCT Trigger: GGTGCAGGAGGACACCATCAAGGTGGTGGTGGATCG...GAGGATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR CAA 90 bp | CAGCAGCAGAAGGCGCCCTGCGGCATCAAGGCGCAGGGAGAGGCTTGCAGGGCCTCCACAACATCCCTCTaGATAGTCCAGAGGAGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: QQQKAPCGIKAQGEACRASTTSL*IVQRRY Trigger: ATACCTCCTCTGGACTATCAAGAGGGATGTTGTGGA...GGCCCTGCAAGCCTCTCCCTGCGCCTTGATGCCGCAGGGCGCCTTCTGCTGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177180.8 |
||
| CDS-3UTR CAA 90 bp | AGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCCTCCTGGGGTCACTGTTCTaGGCCTCCTCCTTCTTACTC | + |
|
Preference number: 5 (lower is better) Translates to: SAWLGQCQCCPRTPCEILLGSLF*ASSFLL Trigger: GAGTAAGAAGGAGGAGGCCAAGAACAGTGACCCCAG...GAGGATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR CAA 90 bp | CCTAGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCCCCATTTGTTGTCCTTaGTGGTCTGGCTGTCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PSAWLGQCQCCPRTPCEIPICCP*WSGCLR Trigger: CCGCAGACAGCCAGACCACAAAGGACAACAAATGGG...GATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACTAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
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| CDS-3UTR CAA 90 bp | AGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCCTCTCCTCCTTCTTACTCTaGCCCTTGACTTTGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SAWLGQCQCCPRTPCEILSSFLL*PLTLLQ Trigger: CTGCAGCAAAGTCAAGGGCAAGAGTAAGAAGGAGGA...GAGGATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
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| CDS-3UTR CAA 90 bp | AGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCCTCGAGAGGCTTGGTAGCTaGAGGTCAGGATTTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SAWLGQCQCCPRTPCEILERLGS*RSGFSG Trigger: TCCTGAAAATCCTGACCTCAAGCTACCAAGCCTCTC...GAGGATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
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| CDS-3UTR CAA 90 bp | AGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCCTCTTCTGGACCACCCATTaGTTGTCCTTTGTGGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SAWLGQCQCCPRTPCEILFWTTH*LSFVVW Trigger: CCAGACCACAAAGGACAACAAATGGGTGGTCCAGAA...GAGGATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
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| CDS-3UTR CAA 90 bp | CCTAGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCCACAGAAGCTCAAAGTaGCCGATGTCACAGTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PSAWLGQCQCCPRTPCEIHRSSK*PMSQFR Trigger: CCGAAACTGTGACATCGGCAACTTTGAGCTTCTGTG...GATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACTAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
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| CDS-3UTR CAA 90 bp | AGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCCTCTCCACAACATCCCTCTaGATAGTCCAGAGGAGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: SAWLGQCQCCPRTPCEILSTTSL*IVQRRY Trigger: ATACCTCCTCTGGACTATCAAGAGGGATGTTGTGGA...GAGGATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109371.8 ENSMUST00000177254.8 |
||
| CDS-3UTR CAA 90 bp | CCTAGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCCTTACTCAGCAGAGCTaGGCATTGCGCAAAGTAACT | + |
|
Preference number: 5 (lower is better) Translates to: PSAWLGQCQCCPRTPCEILTQQS*ALRKVT Trigger: AGTTACTTTGCGCAATGCCAAGCTCTGCTGAGTAAG...GATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
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| CDS-3UTR CAA 90 bp | CACGTTCCTCCTCGGCCCCTCTTCTGCAGGTACTCCTGGAAACGAGTGCTGGTCTCCACAACATCCCTCTaGATAGTCCAGAGGAGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: HVPPRPLFCRYSWKRVLVSTTSL*IVQRRY Trigger: ATACCTCCTCTGGACTATCAAGAGGGATGTTGTGGA...GACCAGCACTCGTTTCCAGGAGTACCTGCAGAAGAGGGGCCGAGGAGGAACGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| CDS-3UTR CAA 90 bp | GTTCTTGGAGGCCTGATCACTGTTTCCATCAGGGCCCGGGCACTCCGCACTTTGAGGTTCTGGAGAGCTTaGGGGAAGAAATTGAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: VLGGLITVSIRARALRTLRFWRA*GKKLNF Trigger: GAAGTTCAATTTCTTCCCCAAAGCTCTCCAGAACCT...CAAAGTGCGGAGTGCCCGGGCCCTGATGGAAACAGTGATCAGGCCTCCAAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| CDS-3UTR CAA 90 bp | CCTAGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCCTTATTGTCTACATGTaGGTAGTCATTGACCTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: PSAWLGQCQCCPRTPCEILIVYM*VVIDLE Trigger: TTCGAGGTCAATGACTACCAACATGTAGACAATAAG...GATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR CAA 90 bp | CCTAGTGCCTGGCTAGGTCAGTGCCAGTGTTGCCCCCGCACCCCTTGTGAGATCTTGTATCTGTCTAATTaGGGGGAAGAAGACAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: PSAWLGQCQCCPRTPCEILYLSN*GEEDKS Trigger: AGATTTGTCTTCTTCCCCCAAATTAGACAGATACAA...GATCTCACAAGGGGTGCGGGGGCAACACTGGCACTGACCTAGCCAGGCACTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000109371.8 ENSMUST00000177254.8 |
||
| CDS-3UTR CAA 90 bp | AACCCCACTGGGACTATTGCAATAGGACCCAAGTATGCTGCTCACCTTGGCCAAGGCAATGGGCGGCATTaGCTTCTTGGCTTTCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: NPTGTIAIGPKYAAHLGQGNGRH*LLGFLH Trigger: GTGAAGAAAGCCAAGAAGCAAATGCCGCCCATTGCC...TTGGCCAAGGTGAGCAGCATACTTGGGTCCTATTGCAATAGTCCCAGTGGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR CAA 90 bp | AACCCCACTGGGACTATTGCAATAGGACCCAAGTATGCTGCTCACCTTGGCCAAGGCGGCATTTGCTTCTaGGCTTTCTTCACGCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: NPTGTIAIGPKYAAHLGQGGICF*AFFTLI Trigger: TATCAGCGTGAAGAAAGCCAAGAAGCAAATGCCGCC...TTGGCCAAGGTGAGCAGCATACTTGGGTCCTATTGCAATAGTCCCAGTGGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR CAA 90 bp | CGGAAGCCCTTTGCTTCTTCCCGTTTCCAGTCCTGCCGCACGGTCGTTCTTGGATTGTATCTGTCTAATTaGGGGGAAGAAGACAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: RKPFASSRFQSCRTVVLGLYLSN*GEEDKS Trigger: AGATTTGTCTTCTTCCCCCAAATTAGACAGATACAA...TCCAAGAACGACCGTGCGGCAGGACTGGAAACGGGAAGAAGCAAAGGGCTTCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177180.8 |
||
| CDS CCA 90 bp | GCTGTGGTAGTCCACAACATCCCTCTTGATAGTCCAGAGGAGGTATaGGATCTCGTTCTTTACCAACCTGGACATCACATCGTGGATATC | + |
|
Preference number: 5 (lower is better) Translates to: AVVVHNIPLDSPEEV*DLVLYQPGHHIVDI Trigger: GATATCCACGATGTGATGTCCAGGTTGGTAAAGAACGAGATCCCATACCTCCTCTGGACTATCAAGAGGGATGTTGTGGACTACCACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR CAA 90 bp | GTGCATGGTGGGGCTGGAGTTGATCTCGATAAGCCATGGCTTGAAGTCTCGCCCAACTGTCTTGCTATTTaGTATCTGTCTAATTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VHGGAGVDLDKPWLEVSPNCLAI*YLSNLG Trigger: CCCCAAATTAGACAGATACAAAATAGCAAGACAGTT...GGGCGAGACTTCAAGCCATGGCTTATCGAGATCAACTCCAGCCCCACCATGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| CDS-3UTR CAA 90 bp | AACCCCACTGGGACTATTGCAATAGGACCCAAGTATGCTGCTCACCTTGGCCAAAGGTTCTGGAGAGCTTaGGGGAAGAAATTGAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: NPTGTIAIGPKYAAHLGQRFWRA*GKKLNF Trigger: GAAGTTCAATTTCTTCCCCAAAGCTCTCCAGAACCT...TTGGCCAAGGTGAGCAGCATACTTGGGTCCTATTGCAATAGTCCCAGTGGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR CAA 90 bp | AACCCCACTGGGACTATTGCAATAGGACCCAAGTATGCTGCTCACCTTGGCCAAGCATGGACCAAGTGGTaGAAAGTACCTTTGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: NPTGTIAIGPKYAAHLGQAWTKW*KVPLLL Trigger: AAGAAGCAAAGGTACTTTCAACCACTTGGTCCATGC...TTGGCCAAGGTGAGCAGCATACTTGGGTCCTATTGCAATAGTCCCAGTGGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS TCA 90 bp | ACCAAGGCAGACTTCTCATGTTCAGGCAGAGTCCAATCTTGGTTGTaGATGATGCTGTCTTCCCGTAGTGATTTAGCATCTGGTCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: TKADFSCSGRVQSWL*MMLSSRSDLASGHR Trigger: CCTGTGACCAGATGCTAAATCACTACGGGAAGACAGCATCATTCACAACCAAGATTGGACTCTGCCTGAACATGAGAAGTCTGCCTTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS CCA 90 bp | GCTGTGGTAGTCCACAACATCCCTCTTGATAGTCCAGAGGAGGTATaGGATCTCGTTCTTTACCAACCATCACATCGTGGATATCATCGA | + |
|
Preference number: 5 (lower is better) Translates to: AVVVHNIPLDSPEEV*DLVLYQPSHRGYHR Trigger: TCGATGATATCCACGATGTGATGGTTGGTAAAGAACGAGATCCCATACCTCCTCTGGACTATCAAGAGGGATGTTGTGGACTACCACAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
||
| CDS-3UTR CAA 90 bp | TCTCTGAGAATTGGGGTGGAGCCAGAGTTCCTCAAATACAATGGGACAGAAAGGAGGTTCTGGAGAGCTTaGGGGAAGAAATTGAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLRIGVEPEFLKYNGTERRFWRA*GKKLNF Trigger: GAAGTTCAATTTCTTCCCCAAAGCTCTCCAGAACCT...CCTTTCTGTCCCATTGTATTTGAGGAACTCTGGCTCCACCCCAATTCTCAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177254.8 |
||
| CDS-3UTR CAA 90 bp | AACCCCACTGGGACTATTGCAATAGGACCCAAGTATGCTGCTCACCTTGGCCAAAACTGTCTTGCTATTTaGTATCTGTCTAATTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: NPTGTIAIGPKYAAHLGQNCLAI*YLSNLG Trigger: CCCCAAATTAGACAGATACAAAATAGCAAGACAGTT...TTGGCCAAGGTGAGCAGCATACTTGGGTCCTATTGCAATAGTCCCAGTGGGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
||
| CDS-3UTR CAA 90 bp | ATTTGCTTCTTGGCTTTCTTCACGCTGATACCTTCCACACAGAGGTCAGACCCGTTGTATCTGTCTAATTaGGGGGAAGAAGACAAATCT | + |
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Preference number: 5 (lower is better) Translates to: ICFLAFFTLIPSTQRSDPLYLSN*GEEDKS Trigger: AGATTTGTCTTCTTCCCCCAAATTAGACAGATACAA...CGGGTCTGACCTCTGTGTGGAAGGTATCAGCGTGAAGAAAGCCAAGAAGCAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| CDS GCA 72 bp | AAGTGGAAGACAGCTTCTTCCTCTCGCCGTTCTCCATaGTCGCCTCTCGTAGCTGGTTCTTTTGGCCCCCAA | + |
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Preference number: 6 (lower is better) Translates to: KWKTASSSRRSP*SPLVAGSFGPQ Trigger: TTGGGGGCCAAAAGAACCAGCTACGAGAGGCGAGCATGGAGAACGGCGAGAGGAAGAAGCTGTCTTCCACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109371.8 ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| CDS CCA 72 bp | GTCCACAACATCCCTCTTGATAGTCCAGAGGAGGTATaGGATCTCGTTCTTTACCAACCTGGACATCACATC | + |
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Preference number: 6 (lower is better) Translates to: VHNIPLDSPEEV*DLVLYQPGHHI Trigger: GATGTGATGTCCAGGTTGGTAAAGAACGAGATCCCATACCTCCTCTGGACTATCAAGAGGGATGTTGTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
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| CDS CCA 72 bp | GTCCACAACATCCCTCTTGATAGTCCAGAGGAGGTATaGGATCTCGTTCTTTACCAACCATCACATCGTGGA | + |
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Preference number: 6 (lower is better) Translates to: VHNIPLDSPEEV*DLVLYQPSHRG Trigger: TCCACGATGTGATGGTTGGTAAAGAACGAGATCCCATACCTCCTCTGGACTATCAAGAGGGATGTTGTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177180.8 ENSMUST00000177254.8 |
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| CDS CCA 72 bp | TCCAGAGGAGGTATGGGATCTCGTTCTTTACCAACCTaGACATCACATCGTGGATATCATCGAATCTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: SRGGMGSRSLPT*TSHRGYHRISP Trigger: TGGAGAGATTCGATGATATCCACGATGTGATGTCCAGGTTGGTAAAGAACGAGATCCCATACCTCCTCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109371.8 |
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| CDS CCA 72 bp | ACTTATTTTCTTCTTTGTGATCTCCATCTGACAAAGTaGAAGACAGCTTCTTCCTCTCGCCGTTCTCCATGC | + |
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Preference number: 6 (lower is better) Translates to: TYFLLCDLHLTK*KTASSSRRSPC Trigger: GCATGGAGAACGGCGAGAGGAAGAAGCTGTCTTCCACTTTGTCAGATGGAGATCACAAAGAAGAAAATAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109371.8 ENSMUST00000177180.8 ENSMUST00000177254.8 |
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