Pregenerated sensors for TTLL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079722Ensembl transcript IDs: ENSMUST00000115747.3
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTTGTTGAACGGGAAGATGAGGACAAAGTTGCCGGCGTGGTCGTTTaGTGTGCTTCCAGCTTCCGGGAGGTCGCCCGCAGGCCCCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: LVEREDEDKVAGVVV*CASSFREVARRPLH Trigger: ATGAAGGGGCCTGCGGGCGACCTCCCGGAAGCTGGAAGCACACCAAACGACCACGCCGGCAACTTTGTCCTCATCTTCCCGTTCAACAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS CCA 90 bp | AAAGTAGCCTTGTTGAACGGGAAGATGAGGACAAAGTTGCCGGCGTaGTCGTTTGGTGTGCTTCCAGCTTCCGGGAGGTCGCCCGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: KVALLNGKMRTKLPA*SFGVLPASGRSPAG Trigger: GCCTGCGGGCGACCTCCCGGAAGCTGGAAGCACACCAAACGACCACGCCGGCAACTTTGTCCTCATCTTCCCGTTCAACAAGGCTACTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS TCA 90 bp | CGGAAGGAGGACGACCTCCAGTACAGATTCCAGTCCTCCACATCCTaGCGTTGCTCATCAAACTTGTCCCACCCACGCTCCAGGAGGACA | + |
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Preference number: 5 (lower is better) Translates to: RKEDDLQYRFQSSTS*RCSSNLSHPRSRRT Trigger: TGTCCTCCTGGAGCGTGGGTGGGACAAGTTTGATGAGCAACGTCAGGATGTGGAGGACTGGAATCTGTACTGGAGGTCGTCCTCCTTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS GCA 90 bp | GGAAGACCATCTTGCGAGGCAAGTGCCAAGCCTTGTGCCTTGGCTTaGTTTTGGCTGCCTCTTTTGTCAGAAGTCTGTCCCGCCTGCTCA | + |
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Preference number: 5 (lower is better) Translates to: GRPSCEASAKPCALA*FWLPLLSEVCPACS Trigger: TGAGCAGGCGGGACAGACTTCTGACAAAAGAGGCAGCCAAAAGCAAGCCAAGGCACAAGGCTTGGCACTTGCCTCGCAAGATGGTCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS GCA 90 bp | TCATCTTGTGAGGCTGTGACTGAGACGCATACGGGAAGACCATCTTaGGAGGCAAGTGCCAAGCCTTGTGCCTTGGCTTGCTTTTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: SSCEAVTETHTGRPS*EASAKPCALACFWL Trigger: CAGCCAAAAGCAAGCCAAGGCACAAGGCTTGGCACTTGCCTCGCAAGATGGTCTTCCCGTATGCGTCTCAGTCACAGCCTCACAAGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS GCA 90 bp | CTTGCGAGGCAAGTGCCAAGCCTTGTGCCTTGGCTTGCTTTTGGCTaGCTCTTTTGTCAGAAGTCTGTCCCGCCTGCTCATCATTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: LARQVPSLVPWLAFG*LFCQKSVPPAHHFS Trigger: AGAGAAATGATGAGCAGGCGGGACAGACTTCTGACAAAAGAGGCAGCCAAAAGCAAGCCAAGGCACAAGGCTTGGCACTTGCCTCGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS CCA 90 bp | GTGCTCTCATCCACTCGGAACACCAGTGGCTTCAAGGGGGCCCCTTaGGGTTCATCTTCTGTCTTCAAAGGCTTGCTTTCCTGTACAGAA | + |
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Preference number: 5 (lower is better) Translates to: VLSSTRNTSGFKGAP*GSSSVFKGLLSCTE Trigger: TTCTGTACAGGAAAGCAAGCCTTTGAAGACAGAAGATGAACCCCAAGGGGCCCCCTTGAAGCCACTGGTGTTCCGAGTGGATGAGAGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS CCA 90 bp | CAGGTGTTTGGCCAGGCAGTCCTTCCTGGTGAGATTGGTCATCCCTaGGTGATGGTTGAGCCTCTGCCAGGGTTTGACATTGACATATTC | + |
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Preference number: 5 (lower is better) Translates to: QVFGQAVLPGEIGHP*VMVEPLPGFDIDIF Trigger: GAATATGTCAATGTCAAACCCTGGCAGAGGCTCAACCATCACCCAGGGATGACCAATCTCACCAGGAAGGACTGCCTGGCCAAACACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS CCA 90 bp | CCATCTTGCGAGGCAAGTGCCAAGCCTTGTGCCTTGGCTTGCTTTTaGCTGCCTCTTTTGTCAGAAGTCTGTCCCGCCTGCTCATCATTT | + |
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Preference number: 5 (lower is better) Translates to: PSCEASAKPCALACF*LPLLSEVCPACSSF Trigger: AAATGATGAGCAGGCGGGACAGACTTCTGACAAAAGAGGCAGCCAAAAGCAAGCCAAGGCACAAGGCTTGGCACTTGCCTCGCAAGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS GCA 90 bp | TTGGCTTGCTTTTGGCTGCCTCTTTTGTCAGAAGTCTGTCCCGCCTaGTCATCATTTCTCTCAACTGGGAGGTTCGAGTGTGCTTGGGAC | + |
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Preference number: 5 (lower is better) Translates to: LACFWLPLLSEVCPA*SSFLSTGRFECAWD Trigger: GTCCCAAGCACACTCGAACCTCCCAGTTGAGAGAAATGATGAGCAGGCGGGACAGACTTCTGACAAAAGAGGCAGCCAAAAGCAAGCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS CCA 90 bp | AAACTCATGGTGATGGCTCCTGGCAAGGGAGACCACGGAGTTTCCTaGAGAAGTTCTCCCACACTTTTTCTCCTCACTTCTGAGGCCGTT | + |
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Preference number: 5 (lower is better) Translates to: KLMVMAPGKGDHGVS*RSSPTLFLLTSEAV Trigger: AACGGCCTCAGAAGTGAGGAGAAAAAGTGTGGGAGAACTTCTCCAGGAAACTCCGTGGTCTCCCTTGCCAGGAGCCATCACCATGAGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS CCA 90 bp | GATGTCACTGAAAATGATTATCCCCCTCCCTCGAGACAGCTCTGCTaGCTTGCAGATCCAGTAGCTTGGCTTGGTACCCAAATCCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: DVTENDYPPPSRQLC*LADPVAWLGTQILL Trigger: AAGCAGGATTTGGGTACCAAGCCAAGCTACTGGATCTGCAAGCCAGCAGAGCTGTCTCGAGGGAGGGGGATAATCATTTTCAGTGACATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS GCA 72 bp | GAGGCTGTGACTGAGACGCATACGGGAAGACCATCTTaGGAGGCAAGTGCCAAGCCTTGTGCCTTGGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: EAVTETHTGRPS*EASAKPCALAC Trigger: GCAAGCCAAGGCACAAGGCTTGGCACTTGCCTCGCAAGATGGTCTTCCCGTATGCGTCTCAGTCACAGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS CAA 90 bp | GGAGGACGACCTCCAGTACAGATTCCAGTCCTCCACATCCTGACGTaGCTCATCAAACTTGTCCCACCCACGCTCCAGGAGGACACTCTG | + |
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Preference number: 6 (lower is better) Translates to: GGRPPVQIPVLHILT*LIKLVPPTLQEDTL Trigger: CAGAGTGTCCTCCTGGAGCGTGGGTGGGACAAGTTTGATGAGCAACGTCAGGATGTGGAGGACTGGAATCTGTACTGGAGGTCGTCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS CAA 90 bp | GGGAAGACCATCTTGCGAGGCAAGTGCCAAGCCTTGTGCCTTGGCTaGCTTTTGGCTGCCTCTTTTGTCAGAAGTCTGTCCCGCCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: GKTILRGKCQALCLG*LLAASFVRSLSRLL Trigger: GAGCAGGCGGGACAGACTTCTGACAAAAGAGGCAGCCAAAAGCAAGCCAAGGCACAAGGCTTGGCACTTGCCTCGCAAGATGGTCTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS CAA 90 bp | GAGGCTCTGAAAGTAGCCTTGTTGAACGGGAAGATGAGGACAAAGTaGCCGGCGTGGTCGTTTGGTGTGCTTCCAGCTTCCGGGAGGTCG | + |
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Preference number: 6 (lower is better) Translates to: EALKVALLNGKMRTK*PAWSFGVLPASGRS Trigger: CGACCTCCCGGAAGCTGGAAGCACACCAAACGACCACGCCGGCAACTTTGTCCTCATCTTCCCGTTCAACAAGGCTACTTTCAGAGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS TCA 72 bp | CCACATCCCAGTTGCGGAGGTAAGAGAAGAACCTGCTaGGGGTCCACTTGCAGCCTTGACCCACCACCTCTT | + |
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Preference number: 6 (lower is better) Translates to: PHPSCGGKRRTC*GSTCSLDPPPL Trigger: AAGAGGTGGTGGGTCAAGGCTGCAAGTGGACCCTCAGCAGGTTCTTCTCTTACCTCCGCAACTGGGATGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS CCA 72 bp | GGCCAGGCAGTCCTTCCTGGTGAGATTGGTCATCCCTaGGTGATGGTTGAGCCTCTGCCAGGGTTTGACATT | + |
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Preference number: 6 (lower is better) Translates to: GQAVLPGEIGHP*VMVEPLPGFDI Trigger: AATGTCAAACCCTGGCAGAGGCTCAACCATCACCCAGGGATGACCAATCTCACCAGGAAGGACTGCCTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS CCA 72 bp | GAGGCAAGTGCCAAGCCTTGTGCCTTGGCTTGCTTTTaGCTGCCTCTTTTGTCAGAAGTCTGTCCCGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: EASAKPCALACF*LPLLSEVCPAC Trigger: GCAGGCGGGACAGACTTCTGACAAAAGAGGCAGCCAAAAGCAAGCCAAGGCACAAGGCTTGGCACTTGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS CCA 72 bp | TTGTTGAACGGGAAGATGAGGACAAAGTTGCCGGCGTaGTCGTTTGGTGTGCTTCCAGCTTCCGGGAGGTCG | + |
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Preference number: 6 (lower is better) Translates to: LLNGKMRTKLPA*SFGVLPASGRS Trigger: CGACCTCCCGGAAGCTGGAAGCACACCAAACGACCACGCCGGCAACTTTGTCCTCATCTTCCCGTTCAACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS CAA 72 bp | CGAGGCAAGTGCCAAGCCTTGTGCCTTGGCTTGCTTTaGGCTGCCTCTTTTGTCAGAAGTCTGTCCCGCCTG | + |
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Preference number: 6 (lower is better) Translates to: RGKCQALCLGLL*AASFVRSLSRL Trigger: CAGGCGGGACAGACTTCTGACAAAAGAGGCAGCCAAAAGCAAGCCAAGGCACAAGGCTTGGCACTTGCCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS TCA 72 bp | GACGACCTCCAGTACAGATTCCAGTCCTCCACATCCTaGCGTTGCTCATCAAACTTGTCCCACCCACGCTCC | + |
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Preference number: 6 (lower is better) Translates to: DDLQYRFQSSTS*RCSSNLSHPRS Trigger: GGAGCGTGGGTGGGACAAGTTTGATGAGCAACGTCAGGATGTGGAGGACTGGAATCTGTACTGGAGGTCGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS CCA 72 bp | TCCACTCGGAACACCAGTGGCTTCAAGGGGGCCCCTTaGGGTTCATCTTCTGTCTTCAAAGGCTTGCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: STRNTSGFKGAP*GSSSVFKGLLS Trigger: GGAAAGCAAGCCTTTGAAGACAGAAGATGAACCCCAAGGGGCCCCCTTGAAGCCACTGGTGTTCCGAGTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS CAA 72 bp | CCTCCAGTACAGATTCCAGTCCTCCACATCCTGACGTaGCTCATCAAACTTGTCCCACCCACGCTCCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: PPVQIPVLHILT*LIKLVPPTLQE Trigger: CTCCTGGAGCGTGGGTGGGACAAGTTTGATGAGCAACGTCAGGATGTGGAGGACTGGAATCTGTACTGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS GCA 72 bp | GCCAGGACTGTGAGAATCACCATGTGGCTGATCTTCTaGCTCAGTAACAGGTCATCCACATCCCAGTTGCGG | + |
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Preference number: 6 (lower is better) Translates to: ARTVRITMWLIF*LSNRSSTSQLR Trigger: CCGCAACTGGGATGTGGATGACCTGTTACTGAGGCAGAAGATCAGCCACATGGTGATTCTCACAGTCCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS GCA 72 bp | CAAGTGCCAAGCCTTGTGCCTTGGCTTGCTTTTGGCTaGCTCTTTTGTCAGAAGTCTGTCCCGCCTGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: QVPSLVPWLAFG*LFCQKSVPPAH Trigger: ATGAGCAGGCGGGACAGACTTCTGACAAAAGAGGCAGCCAAAAGCAAGCCAAGGCACAAGGCTTGGCACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS GCA 72 bp | TCTTGCGAGGCAAGTGCCAAGCCTTGTGCCTTGGCTTaGTTTTGGCTGCCTCTTTTGTCAGAAGTCTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: SCEASAKPCALA*FWLPLLSEVCP Trigger: GGGACAGACTTCTGACAAAAGAGGCAGCCAAAAGCAAGCCAAGGCACAAGGCTTGGCACTTGCCTCGCAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS CCA 72 bp | GAGGGAGCCATGGCCAGGACTGTGAGAATCACCATGTaGCTGATCTTCTGCCTCAGTAACAGGTCATCCACA | + |
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Preference number: 6 (lower is better) Translates to: EGAMARTVRITM*LIFCLSNRSST Trigger: TGTGGATGACCTGTTACTGAGGCAGAAGATCAGCCACATGGTGATTCTCACAGTCCTGGCCATGGCTCCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS CCA 72 bp | AACTGGGAGGTTCGAGTGTGCTTGGGACAGATGTTCTaGACAGCTGGGTCGCTTTTACTGCCCGTCGTAAAC | + |
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Preference number: 6 (lower is better) Translates to: NWEVRVCLGQMF*TAGSLLLPVVN Trigger: GTTTACGACGGGCAGTAAAAGCGACCCAGCTGTCCAGAACATCTGTCCCAAGCACACTCGAACCTCCCAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS CAA 90 bp | GTTGCGGAGGTAAGAGAAGAACCTGCTGAGGGTCCACTTGCAGCCTaGACCCACCACCTCTTTGATCTTCTGATACGAGGCCCCCAATTT | + |
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Preference number: 6 (lower is better) Translates to: VAEVREEPAEGPLAA*THHLFDLLIRGPQF Trigger: AAATTGGGGGCCTCGTATCAGAAGATCAAAGAGGTGGTGGGTCAAGGCTGCAAGTGGACCCTCAGCAGGTTCTTCTCTTACCTCCGCAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS CAA 90 bp | GCAAGTGCCAAGCCTTGTGCCTTGGCTTGCTTTTGGCTGCCTCTTTaGTCAGAAGTCTGTCCCGCCTGCTCATCATTTCTCTCAACTGGG | + |
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Preference number: 6 (lower is better) Translates to: ASAKPCALACFWLPL*SEVCPACSSFLSTG Trigger: CCCAGTTGAGAGAAATGATGAGCAGGCGGGACAGACTTCTGACAAAAGAGGCAGCCAAAAGCAAGCCAAGGCACAAGGCTTGGCACTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS CAA 90 bp | ACCATCTTGCGAGGCAAGTGCCAAGCCTTGTGCCTTGGCTTGCTTTaGGCTGCCTCTTTTGTCAGAAGTCTGTCCCGCCTGCTCATCATT | + |
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Preference number: 6 (lower is better) Translates to: TILRGKCQALCLGLL*AASFVRSLSRLLII Trigger: AATGATGAGCAGGCGGGACAGACTTCTGACAAAAGAGGCAGCCAAAAGCAAGCCAAGGCACAAGGCTTGGCACTTGCCTCGCAAGATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS CCA 72 bp | GTGATGGCTCCTGGCAAGGGAGACCACGGAGTTTCCTaGAGAAGTTCTCCCACACTTTTTCTCCTCACTTCT | + |
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Preference number: 6 (lower is better) Translates to: VMAPGKGDHGVS*RSSPTLFLLTS Trigger: AGAAGTGAGGAGAAAAAGTGTGGGAGAACTTCTCCAGGAAACTCCGTGGTCTCCCTTGCCAGGAGCCATCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS CCA 72 bp | GACCATCTTGCGAGGCAAGTGCCAAGCCTTGTGCCTTaGCTTGCTTTTGGCTGCCTCTTTTGTCAGAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: DHLARQVPSLVP*LAFGCLFCQKS Trigger: AGACTTCTGACAAAAGAGGCAGCCAAAAGCAAGCCAAGGCACAAGGCTTGGCACTTGCCTCGCAAGATGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS CAA 72 bp | ATCTTGCGAGGCAAGTGCCAAGCCTTGTGCCTTGGCTaGCTTTTGGCTGCCTCTTTTGTCAGAAGTCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: ILRGKCQALCLG*LLAASFVRSLS Trigger: GGACAGACTTCTGACAAAAGAGGCAGCCAAAAGCAAGCCAAGGCACAAGGCTTGGCACTTGCCTCGCAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS CAA 72 bp | AAAGTAGCCTTGTTGAACGGGAAGATGAGGACAAAGTaGCCGGCGTGGTCGTTTGGTGTGCTTCCAGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: KVALLNGKMRTK*PAWSFGVLPAS Trigger: GGAAGCTGGAAGCACACCAAACGACCACGCCGGCAACTTTGTCCTCATCTTCCCGTTCAACAAGGCTACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS CAA 72 bp | AAGCCTTGTGCCTTGGCTTGCTTTTGGCTGCCTCTTTaGTCAGAAGTCTGTCCCGCCTGCTCATCATTTCTC | + |
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Preference number: 6 (lower is better) Translates to: KPCALACFWLPL*SEVCPACSSFL Trigger: GAGAAATGATGAGCAGGCGGGACAGACTTCTGACAAAAGAGGCAGCCAAAAGCAAGCCAAGGCACAAGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS CCA 72 bp | TCGAGACAGCTCTGCTGGCTTGCAGATCCAGTAGCTTaGCTTGGTACCCAAATCCTGCTTTTCCTTGAAGTA | + |
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Preference number: 6 (lower is better) Translates to: SRQLCWLADPVA*LGTQILLFLEV Trigger: TACTTCAAGGAAAAGCAGGATTTGGGTACCAAGCCAAGCTACTGGATCTGCAAGCCAGCAGAGCTGTCTCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS CAA 90 bp | CTTTTGACATTTAACCCATTCCTGGAGGCTCTGAAAGTAGCCTTGTaGAACGGGAAGATGAGGACAAAGTTGCCGGCGTGGTCGTTTGGT | + |
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Preference number: 6 (lower is better) Translates to: LLTFNPFLEALKVAL*NGKMRTKLPAWSFG Trigger: ACCAAACGACCACGCCGGCAACTTTGTCCTCATCTTCCCGTTCAACAAGGCTACTTTCAGAGCCTCCAGGAATGGGTTAAATGTCAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS TCA 72 bp | AGTAGCTTGGCTTGGTACCCAAATCCTGCTTTTCCTTaGAGTACTTGGCCACAAACTTGGTGTAGTCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: SSLAWYPNPAFP*STWPQTWCSQW Trigger: CCACTGACTACACCAAGTTTGTGGCCAAGTACTTCAAGGAAAAGCAGGATTTGGGTACCAAGCCAAGCTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS CAA 90 bp | CCGTTTAAGTATAATAGCTCAATAACATCATGGACAAGGCTTCTCTaGACCGACTCATCCGTGGAACAGTCCAAGGTCAAAGCAGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: PFKYNSSITSWTRLL*TDSSVEQSKVKAGL Trigger: CAACCCTGCTTTGACCTTGGACTGTTCCACGGATGAGTCGGTCAAGAGAAGCCTTGTCCATGATGTTATTGAGCTATTATACTTAAACGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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| CDS CAA 72 bp | TATAATAGCTCAATAACATCATGGACAAGGCTTCTCTaGACCGACTCATCCGTGGAACAGTCCAAGGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: YNSSITSWTRLL*TDSSVEQSKVK Trigger: TTTGACCTTGGACTGTTCCACGGATGAGTCGGTCAAGAGAAGCCTTGTCCATGATGTTATTGAGCTATTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115747.3 |
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