Pregenerated sensors for TTLL10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029074Ensembl transcript IDs: ENSMUST00000051509.15, ENSMUST00000184348.8, ENSMUST00000184684.8
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGCTGCGGCTGCCCGGGCTGTGTCCCTaGTGCCTTCCAGGGACCCAG | + |
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Preference number: 4 (lower is better) Translates to: YRSRRGHSKVQGRWMLRLPGLCP*CLPGTQ Trigger: CTGGGTCCCTGGAAGGCAGCAGGGACACAGCCCGGG...CAGCCGCAGCATCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR CCA 90 bp | TTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGCTGCGGCCTCATGGGTCCAGCCTaGCACCTCAGTGTGGCACGG | + |
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Preference number: 4 (lower is better) Translates to: FIGPGEGTARCRAAGCCGLMGPA*HLSVAR Trigger: CCGTGCCACACTGAGGTGCCAGGCTGGACCCATGAG...GCCGCAGCATCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR GCA 90 bp | AGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGCTGCTCTGGGTCTTGGCCTaGAGGGCAGCAGCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: SFYRSRRGHSKVQGRWMLLWVLA*RAAASS Trigger: GGAGGAGGCTGCTGCCCTGCAGGCCAAGACCCAGAG...CAGCATCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR CCA 90 bp | GTAGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGCATGCGGCTTCACAGGTaGGCCGGGGAGGGTGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: VAFIGPGEGTARCRAAGCMRLHR*AGEGEG Trigger: ACCCTCACCCTCCCCGGCCCACCTGTGAAGCCGCAT...GCATCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR TCA 90 bp | TTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGCTGCGGGGAAGCAGTGGGACATaGTCTGCTGCATCCGCTTCG | + |
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Preference number: 4 (lower is better) Translates to: FYRSRRGHSKVQGRWMLRGSSGT*SAASAS Trigger: CGAAGCGGATGCAGCAGATCATGTCCCACTGCTTCC...CCGCAGCATCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR TCA 90 bp | GCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGCTGCACTCCAGCTTGGACTTaGCAGCCAGGAAGCAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: AFIGPGEGTARCRAAGCCTPAWT*QPGSSG Trigger: CCCACTGCTTCCTGGCTGTCAAGTCCAAGCTGGAGT...GCAGCATCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR GCA 90 bp | GCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGCTGCCCATGGTCCACACGGTaGTCTCCTTCAGCAGCGTGT | + |
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Preference number: 4 (lower is better) Translates to: AFIGPGEGTARCRAAGCCPWSTR*SPSAAC Trigger: ACACGCTGCTGAAGGAGAGCACCGTGTGGACCATGG...GCAGCATCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR GCA 90 bp | TCACAAAGTAGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCGCGATTTGCGGGGTGTaGACACGGGAGCTCCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: SQSSFYRSRRGHSKVQGRAICGV*TRELPW Trigger: CCAGGGGAGCTCCCGTGTGCACACCCCGCAAATCGC...GCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCTACTTTGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR CCA 90 bp | TATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGCTGCGGCTGAAGATGCCCTTTCCCTaGTTGGAGGCCGTAGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: YRSRRGHSKVQGRWMLRLKMPFP*LEAVGL Trigger: CAAACCTACGGCCTCCAACCAGGGAAAGGGCATCTT...CAGCCGCAGCATCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR CCA 90 bp | TATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGCTGCGGCTGACAGCCAGGAAGCAGTaGGACATGATCTGCTGCATC | + |
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Preference number: 4 (lower is better) Translates to: YRSRRGHSKVQGRWMLRLTARKQ*DMICCI Trigger: GATGCAGCAGATCATGTCCCACTGCTTCCTGGCTGT...CAGCCGCAGCATCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR CCA 90 bp | GCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGCTGCTATGCAGGGCAGGGTTaGCGTTCATCTCCAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AFIGPGEGTARCRAAGCCYAGQG*RSSPAA Trigger: GGCTGCTGGAGATGAACGCCAACCCTGCCCTGCATA...GCAGCATCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR TCA 90 bp | TGTCACAAAGTAGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCCGGGTTCGAGGGGGCTaGCCCCGGCAGTGGATGAAT | + |
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Preference number: 4 (lower is better) Translates to: CHKVAFIGPGEGTARCRARVRGG*PRQWMN Trigger: ATTCATCCACTGCCGGGGTCAGCCCCCTCGAACCCG...GGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCTACTTTGTGACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR GCA 90 bp | CACAAAGTAGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTCAGACAGCCGCGATTTaGGGGGTGTGCACACGGGAG | + |
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Preference number: 4 (lower is better) Translates to: HKVAFIGPGEGTARCRAAQTAAI*GVCTRE Trigger: CTCCCGTGTGCACACCCCGCAAATCGCGGCTGTCTG...AGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCTACTTTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR GCA 90 bp | TCACAAAGTAGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCGGGCTGTGTCCCTGCTaGCTTCCAGGGACCCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: SQSSFYRSRRGHSKVQGRGLCPC*LPGTQN Trigger: GTTCTGGGTCCCTGGAAGGCAGCAGGGACACAGCCC...GCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCTACTTTGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR CCA 90 bp | CACAAAGTAGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGCCCTGACCGGGACTaGGCTGCTTGTCTCCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: HKVAFIGPGEGTARCRAAGPDRD*AACLLP Trigger: TGGAAGGAGACAAGCAGCCCAGTCCCGGTCAGGGCC...AGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCTACTTTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR CCA 90 bp | TTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGCTGCGGTCATCCTCAATGCTCTaGGTCTTGGCCTGCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: FYRSRRGHSKVQGRWMLRSSSML*VLACRA Trigger: TGCCCTGCAGGCCAAGACCCAGAGCATTGAGGATGA...CCGCAGCATCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR CCA 90 bp | TTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGCTGCGGCTGTGCAAGCTCTTTTaGCAGGTCTCAAGCGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: FYRSRRGHSKVQGRWMLRLCKLF*QVSSAR Trigger: CCTGGCGCTTGAGACCTGCCAAAAGAGCTTGCACAG...CCGCAGCATCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR TCA 90 bp | AAAGTAGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGAGCATCTTGGTCCAGCTaGCTTAGCTCAGGCCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: KVAFIGPGEGTARCRAAGASWSS*LSSGRS Trigger: GCTCCGGCCTGAGCTAAGTCAGCTGGACCAAGATGC...TCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCTACTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR TCA 90 bp | CACAAAGTAGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTTCACAGTGGCTGTCCTaGGTGCGTTGCCAGCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: HKVAFIGPGEGTARCRAASQWLS*VRCQPL Trigger: CAAGGGCTGGCAACGCACTCAGGACAGCCACTGTGA...AGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCTACTTTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR TCA 90 bp | AGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGCTGCCTCCTCCTGGCTCCTaGTCAGAAAGATGCCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: SFYRSRRGHSKVQGRWMLPPPGS*SERCPF Trigger: GAAAGGGCATCTTTCTGATCAGGAGCCAGGAGGAGG...CAGCATCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR GCA 90 bp | GCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGCTGCTTCCTCCAGGTCGTCTaGATCTTGGTCCAGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: AFIGPGEGTARCRAAGCCFLQVV*ILVQLT Trigger: AGTCAGCTGGACCAAGATGCAGACGACCTGGAGGAA...GCAGCATCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR GCA 90 bp | TTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGCTGCGGCAGTGGGACATGATCTaGTGCATCCGCTTCGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: FYRSRRGHSKVQGRWMLRQWDMI*CIRFVK Trigger: CTTCACGAAGCGGATGCAGCAGATCATGTCCCACTG...CCGCAGCATCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR CCA 90 bp | TTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGCTGCGGAGGTCACTGGGAGTCTaGCAGCTTCTTCTTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: FYRSRRGHSKVQGRWMLRRSLGV*QLLLPP Trigger: TGGAGGAAGAAGAAGCTGCCAGACTCCCAGTGACCT...CCGCAGCATCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR CCA 90 bp | AAAGTAGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGAGTCCGGGGAGGTCACTaGGAGTCTGGCAGCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: KVAFIGPGEGTARCRAAGVRGGH*ESGSFF Trigger: GAAGAAGCTGCCAGACTCCCAGTGACCTCCCCGGAC...TCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCTACTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR CCA 90 bp | AAAGTAGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGACAATGCTCTGGGTCTTaGCCTGCAGGGCAGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: KVAFIGPGEGTARCRAAGQCSGS*PAGQQP Trigger: AGGCTGCTGCCCTGCAGGCCAAGACCCAGAGCATTG...TCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCTACTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR GCA 90 bp | AGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGCTGCACTCCGGGGATCACTaGCTTCAGGACTTCACAGTT | + |
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Preference number: 4 (lower is better) Translates to: SFYRSRRGHSKVQGRWMLHSGDH*LQDFTV Trigger: AACTGTGAAGTCCTGAAGGCAGTGATCCCCGGAGTG...CAGCATCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR CCA 90 bp | CAAAGTAGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGCCTTGGTTTGGGTACTaGGCAGCATCCTGGCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: QSSFYRSRRGHSKVQGRWPWFGY*AASWLC Trigger: GCAAAGCCAGGATGCTGCCCAGTACCCAAACCAAGG...CCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCTACTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR TCA 90 bp | CAAAGTAGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGGGAAGTCACAGCCAATaGGGTCAAAGTAGCCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: QSSFYRSRRGHSKVQGRWGSHSQ*GQSSPA Trigger: AGCTGGGCTACTTTGACCTCATTGGCTGTGACTTCC...CCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCTACTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR TCA 90 bp | AAAGTAGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGACACAAAGCGACGCTGTaGCAGCAGAGGCAGCATCTT | + |
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Preference number: 4 (lower is better) Translates to: KVAFIGPGEGTARCRAAGHKATL*QQRQHL Trigger: AAGATGCTGCCTCTGCTGTCACAGCGTCGCTTTGTG...TCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCTACTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR GCA 90 bp | CACAAAGTAGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTTGGGGTCATCCTCAATaGTCTGGGTCTTGGCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: HKVAFIGPGEGTARCRAAWGHPQ*SGSWPA Trigger: TGCAGGCCAAGACCCAGAGCATTGAGGATGACCCCA...AGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCTACTTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR CCA 90 bp | CACAAAGTAGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTCCCATCTGTTTCTCATaGGTCCAGCCTGGCACCTCA | + |
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Preference number: 4 (lower is better) Translates to: HKVAFIGPGEGTARCRAAPICFS*VQPGTS Trigger: TGAGGTGCCAGGCTGGACCCATGAGAAACAGATGGG...AGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCTACTTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR CCA 90 bp | AGTAGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGTTGTTGTTGGGGAGCTaGAACAGCAACTGCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: SSFYRSRRGHSKVQGRWMLLLGS*NSNCWP Trigger: AGGCCAGCAGTTGCTGTTCCAGCTCCCCAACAACAA...CATCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR CCA 90 bp | AAAGTAGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGAGCAGCAGCCTCCTCCTaGCTCCTGATCAGAAAGATG | + |
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Preference number: 4 (lower is better) Translates to: KVAFIGPGEGTARCRAAGAAASS*LLIRKM Trigger: CATCTTTCTGATCAGGAGCCAGGAGGAGGCTGCTGC...TCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCTACTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR GCA 90 bp | AAAGTAGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGGGACATGATCTGCTaGATCCGCTTCGTGAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: KVAFIGPGEGTARCRAAGWDMIC*IRFVKV Trigger: CACCTTCACGAAGCGGATGCAGCAGATCATGTCCCA...TCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCTACTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR CCA 90 bp | TTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGCTGCGGCTTATTGATGCTCCGTTaGTGCCTCCAATGTAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: FIGPGEGTARCRAAGCCGLLMLR*CLQCRR Trigger: TCTTCTACATTGGAGGCACCAACGGAGCATCAATAA...GCCGCAGCATCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR CCA 90 bp | AAAGTAGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATACTGGGCAGCATCCTaGCTTTGCTCAAAGTGCGTG | + |
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Preference number: 4 (lower is better) Translates to: KVAFIGPGEGTARCRAAGYWAAS*LCSKCV Trigger: CACGCACTTTGAGCAAAGCCAGGATGCTGCCCAGTA...TCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCTACTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR CCA 90 bp | CACAAAGTAGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTAGCAGCAGCGGGTTCTaGACATATCTCTGCACCACT | + |
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Preference number: 4 (lower is better) Translates to: HKVAFIGPGEGTARCRAASSSGF*TYLCTT Trigger: AGTGGTGCAGAGATATGTCCAGAACCCGCTGCTGCT...AGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCTACTTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR GCA 90 bp | GTAGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGCTTGATGCTCCGTTGGTaGCTCCAATGTAGAAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: VAFIGPGEGTARCRAAGCLMLRW*LQCRRK Trigger: CTTTCTTCTACATTGGAGGCACCAACGGAGCATCAA...GCATCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR CCA 90 bp | CAAAGTAGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGTTGCAGATCCACATCTaGGTTTCATCAAATAGAGCG | + |
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Preference number: 4 (lower is better) Translates to: QSSFYRSRRGHSKVQGRWLQIHI*VSSNRA Trigger: CGCTCTATTTGATGAAACCCAGATGTGGATCTGCAA...CCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCTACTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS GCA 90 bp | GCTCCTCCTCGGGCGGACCCAGGGAGGGTTCCCGGGCTGTGTCCCTaGTGCCTTCCAGGGACCCAGAACAGAGAGAGGGCTCAGACTCCG | + |
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Preference number: 5 (lower is better) Translates to: APPRADPGRVPGLCP*CLPGTQNRERAQTP Trigger: CGGAGTCTGAGCCCTCTCTCTGTTCTGGGTCCCTGGAAGGCAGCAGGGACACAGCCCGGGAACCCTCCCTGGGTCCGCCCGAGGAGGAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 |
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| CDS GCA 90 bp | CAGACTCCGCTATGGAGCTACCGCTCGAGTCAGACAGCCGCGATTTaGGGGGTGTGCACACGGGAGCTCCCCTGGAGGGCATCGACTTGC | + |
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Preference number: 5 (lower is better) Translates to: QTPLWSYRSSQTAAI*GVCTRELPWRASTC Trigger: GCAAGTCGATGCCCTCCAGGGGAGCTCCCGTGTGCACACCCCGCAAATCGCGGCTGTCTGACTCGAGCGGTAGCTCCATAGCGGAGTCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 |
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| CDS CCA 90 bp | GCACCACTCGCGCCTGTGGTGCACGGAAGGGCATCTTGCGGTAGATaGGGTCATCCTCAATGCTCTGGGTCTTGGCCTGCAGGGCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: APLAPVVHGRASCGR*GHPQCSGSWPAGQQ Trigger: CTGCTGCCCTGCAGGCCAAGACCCAGAGCATTGAGGATGACCCCATCTACCGCAAGATGCCCTTCCGTGCACCACAGGCGCGAGTGGTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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| CDS CCA 90 bp | TGCCTTCCAGGGACCCAGAACAGAGAGAGGGCTCAGACTCCGCTATaGAGCTACCGCTCGAGTCAGACAGCCGCGATTTGCGGGGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: CLPGTQNRERAQTPL*SYRSSQTAAICGVC Trigger: GCACACCCCGCAAATCGCGGCTGTCTGACTCGAGCGGTAGCTCCATAGCGGAGTCTGAGCCCTCTCTCTGTTCTGGGTCCCTGGAAGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 |
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| CDS-3UTR CAA 90 bp | TTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGCTGCGGGCTGTCCTGAGTGCGTaGCCAGCCCTTGCTCTCACA | + |
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Preference number: 5 (lower is better) Translates to: FYRSRRGHSKVQGRWMLRAVLSA*PALALT Trigger: TGTGAGAGCAAGGGCTGGCAACGCACTCAGGACAGC...CCGCAGCATCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS-3UTR CAA 90 bp | AGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGCTGTCAATGCTCTGGGTCTaGGCCTGCAGGGCAGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SFYRSRRGHSKVQGRWMLSMLWV*ACRAAA Trigger: GGCTGCTGCCCTGCAGGCCAAGACCCAGAGCATTGA...CAGCATCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
||
| CDS-3UTR CAA 90 bp | TTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGCTGCGGGTATGCAGGGCAGGGTaGGCGTTCATCTCCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FYRSRRGHSKVQGRWMLRVCRAG*AFISSS Trigger: GCTGCTGGAGATGAACGCCAACCCTGCCCTGCATAC...CCGCAGCATCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
||
| CDS CCA 90 bp | GGGCTGCTTGTCTCCTTCCATCAGGAGCCCGTCCGGGGAGGTCACTaGGAGTCTGGCAGCTTCTTCTTCCTCCAGGTCGTCTGCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GLLVSFHQEPVRGGH*ESGSFFFLQVVCIL Trigger: CAAGATGCAGACGACCTGGAGGAAGAAGAAGCTGCCAGACTCCCAGTGACCTCCCCGGACGGGCTCCTGATGGAAGGAGACAAGCAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
||
| CDS-3UTR CAA 90 bp | AGTAGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGCCGGGACTGGGCTGCTaGTCTCCTTCCATCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSFYRSRRGHSKVQGRWMPGLGC*SPSIRS Trigger: GCTCCTGATGGAAGGAGACAAGCAGCCCAGTCCCGG...CATCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCTACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
||
| CDS-3UTR CAA 90 bp | TATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGCTGCGGCTGTCTCTGGGGAGGCCCTaGGTCTTCCTAAATTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: YRSRRGHSKVQGRWMLRLSLGRP*VFLNLS Trigger: TGACAAATTTAGGAAGACCAAGGGCCTCCCCAGAGA...CAGCCGCAGCATCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
||
| CDS TCA 90 bp | CTGCATCTTGGTCCAGCTGACTTAGCTCAGGCCGGAGCCTTTCCTTaGCGCTGCTCCCCATCTGTTTCTCATGGGTCCAGCCTGGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: LHLGPADLAQAGAFP*RCSPSVSHGSSLAP Trigger: AGGTGCCAGGCTGGACCCATGAGAAACAGATGGGGAGCAGCGTCAAGGAAAGGCTCCGGCCTGAGCTAAGTCAGCTGGACCAAGATGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 |
||
| CDS GCA 90 bp | CATATCTCTGCACCACTCGCGCCTGTGGTGCACGGAAGGGCATCTTaGGGTAGATGGGGTCATCCTCAATGCTCTGGGTCTTGGCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: HISAPLAPVVHGRAS*GRWGHPQCSGSWPA Trigger: TGCAGGCCAAGACCCAGAGCATTGAGGATGACCCCATCTACCGCAAGATGCCCTTCCGTGCACCACAGGCGCGAGTGGTGCAGAGATATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
||
| CDS GCA 90 bp | CAGCAGCGGGTTCTGGACATATCTCTGCACCACTCGCGCCTGTGGTaGACGGAAGGGCATCTTGCGGTAGATGGGGTCATCCTCAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: QQRVLDISLHHSRLW*TEGHLAVDGVILNA Trigger: AGCATTGAGGATGACCCCATCTACCGCAAGATGCCCTTCCGTGCACCACAGGCGCGAGTGGTGCAGAGATATGTCCAGAACCCGCTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
||
| CDS-3UTR CAA 90 bp | TTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGCTGCGGTTTCAGGACCTTGGTTaGGGTACTGGGCAGCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: FYRSRRGHSKVQGRWMLRFQDLG*GTGQHP Trigger: AGGATGCTGCCCAGTACCCAAACCAAGGTCCTGAAA...CCGCAGCATCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
||
| CDS-3UTR CAA 90 bp | AGTAGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGCACTCCAGCTTGGACTaGACAGCCAGGAAGCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSFYRSRRGHSKVQGRWMHSSLD*TARKQW Trigger: CCACTGCTTCCTGGCTGTCAAGTCCAAGCTGGAGTG...CATCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCTACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
||
| CDS-3UTR CAA 90 bp | AGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGCTGAGCTTGCACTCCAGCTaGGACTTGACAGCCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SFYRSRRGHSKVQGRWMLSLHSS*DLTARK Trigger: CTTCCTGGCTGTCAAGTCCAAGCTGGAGTGCAAGCT...CAGCATCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
||
| CDS-3UTR CAA 90 bp | GCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGCTGCTTCAGGACTTCACAGTaGGTATGCAGGGCAGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: AFIGPGEGTARCRAAGCCFRTSQ*VCRAGL Trigger: CAACCCTGCCCTGCATACCAACTGTGAAGTCCTGAA...GCAGCATCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
||
| CDS GCA 90 bp | GTTTGGGTACTGGGCAGCATCCTGGCTTTGCTCAAAGTGCGTGCGTaGTCCCGCAGAGCACTGAGCAACCCGATCTTGGTCGTAAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: VWVLGSILALLKVRA*SRRALSNPILVVRS Trigger: GCTTCTTACGACCAAGATCGGGTTGCTCAGTGCTCTGCGGGAGCACGCACGCACTTTGAGCAAAGCCAGGATGCTGCCCAGTACCCAAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
||
| CDS GCA 90 bp | CTTGGTTTGGGTACTGGGCAGCATCCTGGCTTTGCTCAAAGTGCGTaGGTGCTCCCGCAGAGCACTGAGCAACCCGATCTTGGTCGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: LGLGTGQHPGFAQSA*VLPQSTEQPDLGRK Trigger: CTTACGACCAAGATCGGGTTGCTCAGTGCTCTGCGGGAGCACGCACGCACTTTGAGCAAAGCCAGGATGCTGCCCAGTACCCAAACCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
||
| CDS GCA 90 bp | TCCAGCTTGGACTTGACAGCCAGGAAGCAGTGGGACATGATCTGCTaGATCCGCTTCGTGAAGGTGGTGAAGACCCAATCTCTGGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSLDLTARKQWDMIC*IRFVKVVKTQSLGR Trigger: CCTCCCCAGAGATTGGGTCTTCACCACCTTCACGAAGCGGATGCAGCAGATCATGTCCCACTGCTTCCTGGCTGTCAAGTCCAAGCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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| CDS GCA 90 bp | CACTCCAGCTTGGACTTGACAGCCAGGAAGCAGTGGGACATGATCTaGTGCATCCGCTTCGTGAAGGTGGTGAAGACCCAATCTCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HSSLDLTARKQWDMI*CIRFVKVVKTQSLG Trigger: CCCCAGAGATTGGGTCTTCACCACCTTCACGAAGCGGATGCAGCAGATCATGTCCCACTGCTTCCTGGCTGTCAAGTCCAAGCTGGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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| CDS-3UTR CAA 90 bp | CAAAGTAGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGGTCGTAAGAAGCTTGTaGTTGGGGAGCTGGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: QSSFYRSRRGHSKVQGRWVVRSL*LGSWNS Trigger: GCTGTTCCAGCTCCCCAACAACAAGCTTCTTACGAC...CCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCTACTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS GCA 90 bp | ATAACCACTCCGGGGATCACTGCCTTCAGGACTTCACAGTTGGTATaGAGGGCAGGGTTGGCGTTCATCTCCAGCAGCCACACCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ITTPGITAFRTSQLV*RAGLAFISSSHTLK Trigger: CTTCAAGGTGTGGCTGCTGGAGATGAACGCCAACCCTGCCCTGCATACCAACTGTGAAGTCCTGAAGGCAGTGATCCCCGGAGTGGTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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| CDS TCA 90 bp | GCAACTGCTGGCCTTCCCGAAAGCTGCAGTAGTTGTCCCTGCACTTaGTCTCACACCACTTTAGCTTGTAGTCCTCACAGTGGCTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ATAGLPESCSSCPCT*SHTTLACSPHSGCP Trigger: AGGACAGCCACTGTGAGGACTACAAGCTAAAGTGGTGTGAGATCAAGTGCAGGGACAACTACTGCAGCTTTCGGGAAGGCCAGCAGTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
||
| CDS-3UTR CAA 90 bp | TTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTGGATGCTGCGGTTCCTAAATTTGTCATaGATGTATCGGTTGAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: FYRSRRGHSKVQGRWMLRFLNLS*MYRLRC Trigger: GCACCTCAACCGATACATCAATGACAAATTTAGGAA...CCGCAGCATCCAGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
||
| CDS CCA 90 bp | ATGCCCTTTCCCTGGTTGGAGGCCGTAGGTTTGCAGATCCACATCTaGGTTTCATCAAATAGAGCGAAGAAAGCCTGCCTCTCGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: MPFPWLEAVGLQIHI*VSSNRAKKACLSSL Trigger: CAGAGACGAGAGGCAGGCTTTCTTCGCTCTATTTGATGAAACCCAGATGTGGATCTGCAAACCTACGGCCTCCAACCAGGGAAAGGGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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| CDS-3UTR CAA 90 bp | CACAAAGTAGCTTTTATAGGTCCCGGAGAGGGCACAGCAAGGTGCAGGGCCGCTTTGGTCTTCCTAAATTaGTCATTGATGTATCGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: HKVAFIGPGEGTARCRAALVFLN*SLMYRL Trigger: CAACCGATACATCAATGACAAATTTAGGAAGACCAA...AGCGGCCCTGCACCTTGCTGTGCCCTCTCCGGGACCTATAAAAGCTACTTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051509.15 |
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| CDS GCA 72 bp | CGGGCGGACCCAGGGAGGGTTCCCGGGCTGTGTCCCTaGTGCCTTCCAGGGACCCAGAACAGAGAGAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RADPGRVPGLCP*CLPGTQNRERA Trigger: AGCCCTCTCTCTGTTCTGGGTCCCTGGAAGGCAGCAGGGACACAGCCCGGGAACCCTCCCTGGGTCCGCCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 |
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| CDS CCA 72 bp | GTCTCCTTCCATCAGGAGCCCGTCCGGGGAGGTCACTaGGAGTCTGGCAGCTTCTTCTTCCTCCAGGTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: VSFHQEPVRGGH*ESGSFFFLQVV Trigger: GACGACCTGGAGGAAGAAGAAGCTGCCAGACTCCCAGTGACCTCCCCGGACGGGCTCCTGATGGAAGGAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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| CDS TCA 72 bp | CTTCGGGGTCTTCGAGCAGCCCGATGTCCCAGCCCTTaGATGGGACAGACAGCTGCACCCACTTTGCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LRGLRAARCPSP*MGQTAAPTLLG Trigger: CCCAAGCAAAGTGGGTGCAGCTGTCTGTCCCATTCAAGGGCTGGGACATCGGGCTGCTCGAAGACCCCGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184348.8 |
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| CDS GCA 72 bp | CTGGGCAGCATCCTGGCTTTGCTCAAAGTGCGTGCGTaGTCCCGCAGAGCACTGAGCAACCCGATCTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LGSILALLKVRA*SRRALSNPILV Trigger: GACCAAGATCGGGTTGCTCAGTGCTCTGCGGGAGCACGCACGCACTTTGAGCAAAGCCAGGATGCTGCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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| CDS GCA 72 bp | GGAAGGGCATCTTGCGGTAGATGGGGTCATCCTCAATaGTCTGGGTCTTGGCCTGCAGGGCAGCAGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GRASCGRWGHPQ*SGSWPAGQQPP Trigger: AGGAGGCTGCTGCCCTGCAGGCCAAGACCCAGAGCATTGAGGATGACCCCATCTACCGCAAGATGCCCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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| CDS GCA 72 bp | GCACCACTCGCGCCTGTGGTGCACGGAAGGGCATCTTaGGGTAGATGGGGTCATCCTCAATGCTCTGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: APLAPVVHGRAS*GRWGHPQCSGS Trigger: AGACCCAGAGCATTGAGGATGACCCCATCTACCGCAAGATGCCCTTCCGTGCACCACAGGCGCGAGTGGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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| CDS CCA 72 bp | GACGCTGCTCCCCATCTGTTTCTCATGGGTCCAGCCTaGCACCTCAGTGTGGCACGGATGGATTCTGGACCG | + |
|
Preference number: 6 (lower is better) Translates to: DAAPHLFLMGPA*HLSVARMDSGP Trigger: CGGTCCAGAATCCATCCGTGCCACACTGAGGTGCCAGGCTGGACCCATGAGAAACAGATGGGGAGCAGCGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 |
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| CDS CCA 72 bp | GCGCCTGTGGTGCACGGAAGGGCATCTTGCGGTAGATaGGGTCATCCTCAATGCTCTGGGTCTTGGCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: APVVHGRASCGR*GHPQCSGSWPA Trigger: TGCAGGCCAAGACCCAGAGCATTGAGGATGACCCCATCTACCGCAAGATGCCCTTCCGTGCACCACAGGCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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| CDS CCA 72 bp | CGGGTTCTGGACATATCTCTGCACCACTCGCGCCTGTaGTGCACGGAAGGGCATCTTGCGGTAGATGGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: RVLDISLHHSRL*CTEGHLAVDGV Trigger: GACCCCATCTACCGCAAGATGCCCTTCCGTGCACCACAGGCGCGAGTGGTGCAGAGATATGTCCAGAACCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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| CDS CCA 72 bp | GGGACCCAGAACAGAGAGAGGGCTCAGACTCCGCTATaGAGCTACCGCTCGAGTCAGACAGCCGCGATTTGC | + |
|
Preference number: 6 (lower is better) Translates to: GTQNRERAQTPL*SYRSSQTAAIC Trigger: GCAAATCGCGGCTGTCTGACTCGAGCGGTAGCTCCATAGCGGAGTCTGAGCCCTCTCTCTGTTCTGGGTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 |
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| CDS CCA 72 bp | GGGGTCTTCGAGCAGCCCGATGTCCCAGCCCTTGAATaGGACAGACAGCTGCACCCACTTTGCTTGGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GVFEQPDVPALE*DRQLHPLCLGK Trigger: CTTCCCCAAGCAAAGTGGGTGCAGCTGTCTGTCCCATTCAAGGGCTGGGACATCGGGCTGCTCGAAGACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184348.8 |
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| CDS CAA 72 bp | GGCACCTCAGTGTGGCACGGATGGATTCTGGACCGTTaGGATCTCTTGGAGCTGACACGGGTTCGAGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GTSVWHGWILDR*DLLELTRVRGG Trigger: GCCCCCTCGAACCCGTGTCAGCTCCAAGAGATCCAAACGGTCCAGAATCCATCCGTGCCACACTGAGGTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 |
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| CDS CAA 72 bp | AGGAAGCCTCCCCAAGTCCTGGGCTGTGGCTTCAGCTaGTGCCTCACTTCCATCTCTGTGAGGCCTTCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: RKPPQVLGCGFS*CLTSISVRPSG Trigger: GCCGGAAGGCCTCACAGAGATGGAAGTGAGGCACAAGCTGAAGCCACAGCCCAGGACTTGGGGAGGCTTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184348.8 |
||
| CDS CAA 72 bp | CCTTCGGGGTCTTCGAGCAGCCCGATGTCCCAGCCCTaGAATGGGACAGACAGCTGCACCCACTTTGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: PSGSSSSPMSQP*NGTDSCTHFAW Trigger: CCAAGCAAAGTGGGTGCAGCTGTCTGTCCCATTCAAGGGCTGGGACATCGGGCTGCTCGAAGACCCCGAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184348.8 |
||
| CDS TCA 72 bp | GGTCCAGCTGACTTAGCTCAGGCCGGAGCCTTTCCTTaGCGCTGCTCCCCATCTGTTTCTCATGGGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GPADLAQAGAFP*RCSPSVSHGSS Trigger: GCTGGACCCATGAGAAACAGATGGGGAGCAGCGTCAAGGAAAGGCTCCGGCCTGAGCTAAGTCAGCTGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 |
||
| CDS GCA 72 bp | CCGGGGATCACTGCCTTCAGGACTTCACAGTTGGTATaGAGGGCAGGGTTGGCGTTCATCTCCAGCAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PGITAFRTSQLV*RAGLAFISSSH Trigger: GTGGCTGCTGGAGATGAACGCCAACCCTGCCCTGCATACCAACTGTGAAGTCCTGAAGGCAGTGATCCCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
||
| CDS CCA 72 bp | AGCCTTTCCTTGACGCTGCTCCCCATCTGTTTCTCATaGGTCCAGCCTGGCACCTCAGTGTGGCACGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: SLSLTLLPICFS*VQPGTSVWHGW Trigger: CCATCCGTGCCACACTGAGGTGCCAGGCTGGACCCATGAGAAACAGATGGGGAGCAGCGTCAAGGAAAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 |
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| CDS TCA 72 bp | TTGGATCTCTTGGAGCTGACACGGGTTCGAGGGGGCTaGCCCCGGCAGTGGATGAATCTTGGACGGTTTCGT | + |
|
Preference number: 6 (lower is better) Translates to: LDLLELTRVRGG*PRQWMNLGRFR Trigger: ACGAAACCGTCCAAGATTCATCCACTGCCGGGGTCAGCCCCCTCGAACCCGTGTCAGCTCCAAGAGATCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 |
||
| CDS GCA 72 bp | GTTCTGGACATATCTCTGCACCACTCGCGCCTGTGGTaGACGGAAGGGCATCTTGCGGTAGATGGGGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: VLDISLHHSRLW*TEGHLAVDGVI Trigger: GATGACCCCATCTACCGCAAGATGCCCTTCCGTGCACCACAGGCGCGAGTGGTGCAGAGATATGTCCAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
||
| CDS CCA 72 bp | CCACTCCGGGGATCACTGCCTTCAGGACTTCACAGTTaGTATGCAGGGCAGGGTTGGCGTTCATCTCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PLRGSLPSGLHS*YAGQGWRSSPA Trigger: TGCTGGAGATGAACGCCAACCCTGCCCTGCATACCAACTGTGAAGTCCTGAAGGCAGTGATCCCCGGAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
||
| CDS CAA 72 bp | CGTGCGTGCTCCCGCAGAGCACTGAGCAACCCGATCTaGGTCGTAAGAAGCTTGTTGTTGGGGAGCTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: RACSRRALSNPI*VVRSLLLGSWN Trigger: GTTCCAGCTCCCCAACAACAAGCTTCTTACGACCAAGATCGGGTTGCTCAGTGCTCTGCGGGAGCACGCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
||
| CDS CAA 90 bp | CGCAGAGCACTGAGCAACCCGATCTTGGTCGTAAGAAGCTTGTTGTaGGGGAGCTGGAACAGCAACTGCTGGCCTTCCCGAAAGCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RRALSNPILVVRSLL*GSWNSNCWPSRKLQ Trigger: CTGCAGCTTTCGGGAAGGCCAGCAGTTGCTGTTCCAGCTCCCCAACAACAAGCTTCTTACGACCAAGATCGGGTTGCTCAGTGCTCTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
||
| CDS CAA 90 bp | TCCCGCAGAGCACTGAGCAACCCGATCTTGGTCGTAAGAAGCTTGTaGTTGGGGAGCTGGAACAGCAACTGCTGGCCTTCCCGAAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SRRALSNPILVVRSL*LGSWNSNCWPSRKL Trigger: CAGCTTTCGGGAAGGCCAGCAGTTGCTGTTCCAGCTCCCCAACAACAAGCTTCTTACGACCAAGATCGGGTTGCTCAGTGCTCTGCGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
||
| CDS CAA 90 bp | TGCTCCCGCAGAGCACTGAGCAACCCGATCTTGGTCGTAAGAAGCTaGTTGTTGGGGAGCTGGAACAGCAACTGCTGGCCTTCCCGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: CSRRALSNPILVVRS*LLGSWNSNCWPSRK Trigger: CTTTCGGGAAGGCCAGCAGTTGCTGTTCCAGCTCCCCAACAACAAGCTTCTTACGACCAAGATCGGGTTGCTCAGTGCTCTGCGGGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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| CDS CAA 90 bp | CTCAAAGTGCGTGCGTGCTCCCGCAGAGCACTGAGCAACCCGATCTaGGTCGTAAGAAGCTTGTTGTTGGGGAGCTGGAACAGCAACTGC | + |
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Preference number: 6 (lower is better) Translates to: LKVRACSRRALSNPI*VVRSLLLGSWNSNC Trigger: GCAGTTGCTGTTCCAGCTCCCCAACAACAAGCTTCTTACGACCAAGATCGGGTTGCTCAGTGCTCTGCGGGAGCACGCACGCACTTTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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| CDS CAA 90 bp | GTCTCTATAACCACTCCGGGGATCACTGCCTTCAGGACTTCACAGTaGGTATGCAGGGCAGGGTTGGCGTTCATCTCCAGCAGCCACACC | + |
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Preference number: 6 (lower is better) Translates to: VSITTPGITAFRTSQ*VCRAGLAFISSSHT Trigger: GGTGTGGCTGCTGGAGATGAACGCCAACCCTGCCCTGCATACCAACTGTGAAGTCCTGAAGGCAGTGATCCCCGGAGTGGTTATAGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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| CDS CCA 72 bp | TCATGGGTCCAGCCTGGCACCTCAGTGTGGCACGGATaGATTCTGGACCGTTTGGATCTCTTGGAGCTGACA | + |
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Preference number: 6 (lower is better) Translates to: SWVQPGTSVWHG*ILDRLDLLELT Trigger: TGTCAGCTCCAAGAGATCCAAACGGTCCAGAATCCATCCGTGCCACACTGAGGTGCCAGGCTGGACCCATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 |
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| CDS CAA 72 bp | GCACTGAGCAACCCGATCTTGGTCGTAAGAAGCTTGTaGTTGGGGAGCTGGAACAGCAACTGCTGGCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: ALSNPILVVRSL*LGSWNSNCWPS Trigger: GGAAGGCCAGCAGTTGCTGTTCCAGCTCCCCAACAACAAGCTTCTTACGACCAAGATCGGGTTGCTCAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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| CDS CAA 90 bp | CTGGGGAGGCCCTTGGTCTTCCTAAATTTGTCATTGATGTATCGGTaGAGGTGCTCCATGGTCCACACGGTGCTCTCCTTCAGCAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: LGRPLVFLNLSLMYR*RCSMVHTVLSFSSV Trigger: CACGCTGCTGAAGGAGAGCACCGTGTGGACCATGGAGCACCTCAACCGATACATCAATGACAAATTTAGGAAGACCAAGGGCCTCCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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| CDS GCA 72 bp | GACTTGACAGCCAGGAAGCAGTGGGACATGATCTGCTaGATCCGCTTCGTGAAGGTGGTGAAGACCCAATCT | + |
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Preference number: 6 (lower is better) Translates to: DLTARKQWDMIC*IRFVKVVKTQS Trigger: AGATTGGGTCTTCACCACCTTCACGAAGCGGATGCAGCAGATCATGTCCCACTGCTTCCTGGCTGTCAAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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| CDS GCA 72 bp | TTGGACTTGACAGCCAGGAAGCAGTGGGACATGATCTaGTGCATCCGCTTCGTGAAGGTGGTGAAGACCCAA | + |
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Preference number: 6 (lower is better) Translates to: LDLTARKQWDMI*CIRFVKVVKTQ Trigger: TTGGGTCTTCACCACCTTCACGAAGCGGATGCAGCAGATCATGTCCCACTGCTTCCTGGCTGTCAAGTCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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| CDS CCA 72 bp | ATCTGTTTCTCATGGGTCCAGCCTGGCACCTCAGTGTaGCACGGATGGATTCTGGACCGTTTGGATCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: ICFSWVQPGTSV*HGWILDRLDLL Trigger: CAAGAGATCCAAACGGTCCAGAATCCATCCGTGCCACACTGAGGTGCCAGGCTGGACCCATGAGAAACAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 |
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| CDS CCA 72 bp | ACATCAAACTTCTTCCCATCTAGCAGCAGCGGGTTCTaGACATATCTCTGCACCACTCGCGCCTGTGGTGCA | + |
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Preference number: 6 (lower is better) Translates to: TSNFFPSSSSGF*TYLCTTRACGA Trigger: TGCACCACAGGCGCGAGTGGTGCAGAGATATGTCCAGAACCCGCTGCTGCTAGATGGGAAGAAGTTTGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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| CDS CAA 72 bp | AGAGCACTGAGCAACCCGATCTTGGTCGTAAGAAGCTaGTTGTTGGGGAGCTGGAACAGCAACTGCTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: RALSNPILVVRS*LLGSWNSNCWP Trigger: AGGCCAGCAGTTGCTGTTCCAGCTCCCCAACAACAAGCTTCTTACGACCAAGATCGGGTTGCTCAGTGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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| CDS CAA 72 bp | GCCTTCAGGACTTCACAGTTGGTATGCAGGGCAGGGTaGGCGTTCATCTCCAGCAGCCACACCTTGAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: AFRTSQLVCRAG*AFISSSHTLKF Trigger: AAACTTCAAGGTGTGGCTGCTGGAGATGAACGCCAACCCTGCCCTGCATACCAACTGTGAAGTCCTGAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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| CDS CCA 72 bp | CCCTGGTTGGAGGCCGTAGGTTTGCAGATCCACATCTaGGTTTCATCAAATAGAGCGAAGAAAGCCTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: PWLEAVGLQIHI*VSSNRAKKACL Trigger: GAGGCAGGCTTTCTTCGCTCTATTTGATGAAACCCAGATGTGGATCTGCAAACCTACGGCCTCCAACCAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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| CDS CAA 90 bp | GTGGTGAAGACCCAATCTCTGGGGAGGCCCTTGGTCTTCCTAAATTaGTCATTGATGTATCGGTTGAGGTGCTCCATGGTCCACACGGTG | + |
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Preference number: 6 (lower is better) Translates to: VVKTQSLGRPLVFLN*SLMYRLRCSMVHTV Trigger: CACCGTGTGGACCATGGAGCACCTCAACCGATACATCAATGACAAATTTAGGAAGACCAAGGGCCTCCCCAGAGATTGGGTCTTCACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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| CDS CAA 90 bp | GGGATCACTGCCTTCAGGACTTCACAGTTGGTATGCAGGGCAGGGTaGGCGTTCATCTCCAGCAGCCACACCTTGAAGTTTTCATCAATC | + |
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Preference number: 6 (lower is better) Translates to: GITAFRTSQLVCRAG*AFISSSHTLKFSSI Trigger: GATTGATGAAAACTTCAAGGTGTGGCTGCTGGAGATGAACGCCAACCCTGCCCTGCATACCAACTGTGAAGTCCTGAAGGCAGTGATCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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| CDS CAA 90 bp | ATCCGCTTCGTGAAGGTGGTGAAGACCCAATCTCTGGGGAGGCCCTaGGTCTTCCTAAATTTGTCATTGATGTATCGGTTGAGGTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: IRFVKVVKTQSLGRP*VFLNLSLMYRLRCS Trigger: GGAGCACCTCAACCGATACATCAATGACAAATTTAGGAAGACCAAGGGCCTCCCCAGAGATTGGGTCTTCACCACCTTCACGAAGCGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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| CDS TCA 72 bp | GAGTGCGTTGCCAGCCCTTGCTCTCACAGTAGTTGCTaGTTATTGATGCTCCGTTGGTGCCTCCAATGTAGA | + |
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Preference number: 6 (lower is better) Translates to: ECVASPCSHSSC*LLMLRWCLQCR Trigger: TCTACATTGGAGGCACCAACGGAGCATCAATAATCAGCAACTACTGTGAGAGCAAGGGCTGGCAACGCACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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| CDS TCA 72 bp | GGCCTTCCCGAAAGCTGCAGTAGTTGTCCCTGCACTTaGTCTCACACCACTTTAGCTTGTAGTCCTCACAGT | + |
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Preference number: 6 (lower is better) Translates to: GLPESCSSCPCT*SHTTLACSPHS Trigger: ACTGTGAGGACTACAAGCTAAAGTGGTGTGAGATCAAGTGCAGGGACAACTACTGCAGCTTTCGGGAAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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| CDS CAA 90 bp | CTCCTGATCAGAAAGATGCCCTTTCCCTGGTTGGAGGCCGTAGGTTaGCAGATCCACATCTGGGTTTCATCAAATAGAGCGAAGAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: LLIRKMPFPWLEAVG*QIHIWVSSNRAKKA Trigger: GGCTTTCTTCGCTCTATTTGATGAAACCCAGATGTGGATCTGCAAACCTACGGCCTCCAACCAGGGAAAGGGCATCTTTCTGATCAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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| CDS CCA 72 bp | AAAACTCTTCCATTTTCAGGACCTTGGTTTGGGTACTaGGCAGCATCCTGGCTTTGCTCAAAGTGCGTGCGT | + |
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Preference number: 6 (lower is better) Translates to: KTLPFSGPWFGY*AASWLCSKCVR Trigger: ACGCACGCACTTTGAGCAAAGCCAGGATGCTGCCCAGTACCCAAACCAAGGTCCTGAAAATGGAAGAGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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| CDS CAA 72 bp | AGAAAGATGCCCTTTCCCTGGTTGGAGGCCGTAGGTTaGCAGATCCACATCTGGGTTTCATCAAATAGAGCG | + |
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Preference number: 6 (lower is better) Translates to: RKMPFPWLEAVG*QIHIWVSSNRA Trigger: CGCTCTATTTGATGAAACCCAGATGTGGATCTGCAAACCTACGGCCTCCAACCAGGGAAAGGGCATCTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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| CDS TCA 72 bp | TTGCCAGCCCTTGCTCTCACAGTAGTTGCTGATTATTaGTGCTCCGTTGGTGCCTCCAATGTAGAAGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: LPALALTVVADY*CSVGASNVEER Trigger: CCTTTCTTCTACATTGGAGGCACCAACGGAGCATCAATAATCAGCAACTACTGTGAGAGCAAGGGCTGGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051509.15 ENSMUST00000184348.8 ENSMUST00000184684.8 |
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