Pregenerated sensors for TTLL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022442Ensembl transcript IDs: ENSMUST00000016897.12, ENSMUST00000109479.8, ENSMUST00000109480.8, ENSMUST00000154401.8
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGCGTGCGTGCGTGCGTGCGTGTGTGTGTGTGTGTGTGCATGTGTaGACTTGCAAGTGCTTGAGCCCCAGTGATGTGGACTCCTCCACC | + |
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Preference number: 1 (lower is better) Translates to: VRACVRACVCVCVHV*TCKCLSPSDVDSST Trigger: GGTGGAGGAGTCCACATCACTGGGGCTCAAGCACTTGCAAGTGCACACATGCACACACACACACACACACGCACGCACGCACGCACGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
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| 3UTR GCA 90 bp | GCGTGCGTGCGTGCGTGTGTGTGTGTGTGTGTGCATGTGTGCACTTaGAAGTGCTTGAGCCCCAGTGATGTGGACTCCTCCACCTTGCAT | + |
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Preference number: 1 (lower is better) Translates to: ACVRACVCVCVHVCT*KCLSPSDVDSSTLH Trigger: ATGCAAGGTGGAGGAGTCCACATCACTGGGGCTCAAGCACTTGCAAGTGCACACATGCACACACACACACACACACGCACGCACGCACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
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| 3UTR TCA 90 bp | AGAAGCCTGTTGAGGATCAGTATCCGCCTTGCTCGGCTTCAGCTCTaGCAGATGTGCTCAGCTGCCTCACCCATACCCAAGGCTTTCCCC | + |
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Preference number: 1 (lower is better) Translates to: RSLLRISIRLARLQL*QMCSAASPIPKAFP Trigger: GGGGAAAGCCTTGGGTATGGGTGAGGCAGCTGAGCACATCTGTCAGAGCTGAAGCCGAGCAAGGCGGATACTGATCCTCAACAGGCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
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| 3UTR TCA 90 bp | CCAGAGAAGTCTAACTTAGGAGGGAAGACACACCCTGATCGTGAGTaGCATCATCCCACAGGCTGGGGCACTGAGCTGAAGGAAGAAAGA | + |
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Preference number: 1 (lower is better) Translates to: PEKSNLGGKTHPDRE*HHPTGWGTELKEER Trigger: TCTTTCTTCCTTCAGCTCAGTGCCCCAGCCTGTGGGATGATGTCACTCACGATCAGGGTGTGTCTTCCCTCCTAAGTTAGACTTCTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
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| 3UTR TCA 90 bp | ACGGACTCACTTCCAAATCATGCCTTAACACATGCGGGAGAGCAATaGGAATGTCCTCTTTTCCTGTGGCACTGCTGGCCAAGGTGTCAG | + |
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Preference number: 1 (lower is better) Translates to: TDSLPNHALTHAGEQ*ECPLFLWHCWPRCQ Trigger: CTGACACCTTGGCCAGCAGTGCCACAGGAAAAGAGGACATTCTCATTGCTCTCCCGCATGTGTTAAGGCATGATTTGGAAGTGAGTCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
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| 3UTR GCA 90 bp | AAGTTCCATCACATACCGAAGCTGTTGTTTTTGTGTGTGCATGTGTaGGTGCGTGCGTGCGTGCGTGTGTGTGTGTGTGTGTGCATGTGT | + |
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Preference number: 1 (lower is better) Translates to: KFHHIPKLLFLCVHV*VRACVRVCVCVCMC Trigger: ACACATGCACACACACACACACACACGCACGCACGCACGCACGCACACATGCACACACAAAAACAACAGCTTCGGTATGTGATGGAACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
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| 3UTR TCA 90 bp | GTGTGTGTGTGTGCATGTGTGCACTTGCAAGTGCTTGAGCCCCAGTaGTGTGGACTCCTCCACCTTGCATTGAGTCTTTATTTACAAGGC | + |
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Preference number: 1 (lower is better) Translates to: VCVCACVHLQVLEPQ*CGLLHLALSLYLQG Trigger: GCCTTGTAAATAAAGACTCAATGCAAGGTGGAGGAGTCCACATCACTGGGGCTCAAGCACTTGCAAGTGCACACATGCACACACACACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
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| 3UTR GCA 90 bp | TCAGTTCTGAGAAATGACGCTGTGGCTGCGGCCAGGGAAAAGCCCTaGTGTATGGTGTATATCTTCTCATTTCTAGGTCAGCCACCACTA | + |
|
Preference number: 1 (lower is better) Translates to: SVLRNDAVAAAREKP*CMVYIFSFLGQPPL Trigger: TAGTGGTGGCTGACCTAGAAATGAGAAGATATACACCATACAGCAGGGCTTTTCCCTGGCCGCAGCCACAGCGTCATTTCTCAGAACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
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| 3UTR TCA 90 bp | TGCAAGTGCTTGAGCCCCAGTGATGTGGACTCCTCCACCTTGCATTaGGTCTTTATTTACAAGGCCTGCTCAGGAAAGCACTCTGGAAAA | + |
|
Preference number: 1 (lower is better) Translates to: CKCLSPSDVDSSTLH*VFIYKACSGKHSGK Trigger: TTTTCCAGAGTGCTTTCCTGAGCAGGCCTTGTAAATAAAGACTCAATGCAAGGTGGAGGAGTCCACATCACTGGGGCTCAAGCACTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
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| 3UTR-3UTR TCA 90 bp | GTTCTAGGCCAGCCTGGTCTACATGGCAAGTTCCAGGCCATCCAGAGGTACCTAGTGCTTGAGCCCCAGTaGTGTGGACTCCTCCACCTT | + |
|
Preference number: 2 (lower is better) Translates to: VLGQPGLHGKFQAIQRYLVLEPQ*CGLLHL Trigger: AAGGTGGAGGAGTCCACATCACTGGGGCTCAAGCAC...TAGGTACCTCTGGATGGCCTGGAACTTGCCATGTAGACCAGGCTGGCCTAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCAGGGAAAAGCCCTGCTGTATGGTGTATATCTTCTCATTTCTAGGTCAGCCTTCCTGTGGCACTGCTaGCCAAGGTGTCAGGGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: GQGKALLYGVYLLISRSAFLWHC*PRCQGC Trigger: ACAGCCCTGACACCTTGGCCAGCAGTGCCACAGGAA...GGCTGACCTAGAAATGAGAAGATATACACCATACAGCAGGGCTTTTCCCTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
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| 3UTR-3UTR TCA 90 bp | CTCAATTACATTTCCAATGCTATCCCAAAAGTCTCCCACACCCTCCCCCACAAAGCTCGGCTTCAGCTCTaGCAGATGTGCTCAGCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: LNYISNAIPKVSHTLPHKARLQL*QMCSAA Trigger: GGCAGCTGAGCACATCTGTCAGAGCTGAAGCCGAGC...TTTGTGGGGGAGGGTGTGGGAGACTTTTGGGATAGCATTGGAAATGTAATTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
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| 3UTR-3UTR TCA 90 bp | CCCTGCTGTATGGTGTATATCTTCTCATTTCTAGGTCAGCCACCACTACACCCTCATGCGGGAGAGCAATaGGAATGTCCTCTTTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: PCCMVYIFSFLGQPPLHPHAGEQ*ECPLFL Trigger: CAGGAAAAGAGGACATTCTCATTGCTCTCCCGCATG...AGGGTGTAGTGGTGGCTGACCTAGAAATGAGAAGATATACACCATACAGCAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
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| 3UTR-3UTR CCA 90 bp | TGCGTGTGTGTGTGTGTGTGTGCATGTGTGCACTTGCAAGTGCTTGAGCCCCAGCTCAGGAAAGCACTCTaGAAAACTGAAATTCCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: CVCVCVCACVHLQVLEPQLRKAL*KTEIPK Trigger: TTTTGGAATTTCAGTTTTCCAGAGTGCTTTCCTGAG...CTGGGGCTCAAGCACTTGCAAGTGCACACATGCACACACACACACACACACGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGTCCAGCGGTATCTCAGGGTAACTCTGGGAGTGTTTCCAGAGAAGTCTAACAAAAGCCCTGCTGTATaGTGTATATCTTCTCATTTC | + |
|
Preference number: 2 (lower is better) Translates to: TVQRYLRVTLGVFPEKSNKSPAV*CISSHF Trigger: GAAATGAGAAGATATACACCATACAGCAGGGCTTTT...GTTAGACTTCTCTGGAAACACTCCCAGAGTTACCCTGAGATACCGCTGGACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
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| 3UTR GCA 72 bp | CGTGCGTGTGTGTGTGTGTGTGTGCATGTGTGCACTTaGAAGTGCTTGAGCCCCAGTGATGTGGACTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: RACVCVCVHVCT*KCLSPSDVDSS Trigger: GGAGGAGTCCACATCACTGGGGCTCAAGCACTTGCAAGTGCACACATGCACACACACACACACACACGCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
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| 3UTR GCA 72 bp | CCTTGCTCGGCTTCAGCTCTGACAGATGTGCTCAGCTaGCTCACCCATACCCAAGGCTTTCCCCACCATGAA | + |
|
Preference number: 3 (lower is better) Translates to: PCSASALTDVLS*LTHTQGFPHHE Trigger: TTCATGGTGGGGAAAGCCTTGGGTATGGGTGAGGCAGCTGAGCACATCTGTCAGAGCTGAAGCCGAGCAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
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| 3UTR-3UTR CAA 90 bp | GTTCTAGGCCAGCCTGGTCTACATGGCAAGTTCCAGGCCATCCAGAGGTACCTATGCACTTGCAAGTGCTaGAGCCCCAGTGATGTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: VLGQPGLHGKFQAIQRYLCTCKC*SPSDVD Trigger: GTCCACATCACTGGGGCTCAAGCACTTGCAAGTGCA...TAGGTACCTCTGGATGGCCTGGAACTTGCCATGTAGACCAGGCTGGCCTAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
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| 3UTR TCA 72 bp | TTGAGGATCAGTATCCGCCTTGCTCGGCTTCAGCTCTaGCAGATGTGCTCAGCTGCCTCACCCATACCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LRISIRLARLQL*QMCSAASPIPK Trigger: CTTGGGTATGGGTGAGGCAGCTGAGCACATCTGTCAGAGCTGAAGCCGAGCAAGGCGGATACTGATCCTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
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| 3UTR TCA 72 bp | TTGGGGAAGGTCAGGTATTTGATCAGTTCTGAGAAATaGCGCTGTGGCTGCGGCCAGGGAAAAGCCCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LGKVRYLISSEK*RCGCGQGKALL Trigger: CAGCAGGGCTTTTCCCTGGCCGCAGCCACAGCGTCATTTCTCAGAACTGATCAAATACCTGACCTTCCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
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| 3UTR TCA 72 bp | TCTAACTTAGGAGGGAAGACACACCCTGATCGTGAGTaGCATCATCCCACAGGCTGGGGCACTGAGCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SNLGGKTHPDRE*HHPTGWGTELK Trigger: CTTCAGCTCAGTGCCCCAGCCTGTGGGATGATGTCACTCACGATCAGGGTGTGTCTTCCCTCCTAAGTTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
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| 3UTR GCA 72 bp | TGTGTGTGTGTGTGTGTGCATGTGTGCACTTGCAAGTaGTTGAGCCCCAGTGATGTGGACTCCTCCACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: CVCVCVHVCTCK*LSPSDVDSSTL Trigger: CAAGGTGGAGGAGTCCACATCACTGGGGCTCAAGCACTTGCAAGTGCACACATGCACACACACACACACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
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| 3UTR GCA 72 bp | CACATACCGAAGCTGTTGTTTTTGTGTGTGCATGTGTaGGTGCGTGCGTGCGTGCGTGTGTGTGTGTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: HIPKLLFLCVHV*VRACVRVCVCV Trigger: CACACACACACACACACGCACGCACGCACGCACGCACACATGCACACACAAAAACAACAGCTTCGGTATGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
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| 3UTR GCA 72 bp | GGAAGAAAGAAGCCTGTTGAGGATCAGTATCCGCCTTaGTCGGCTTCAGCTCTGACAGATGTGCTCAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GRKKPVEDQYPP*SASALTDVLSC Trigger: GCAGCTGAGCACATCTGTCAGAGCTGAAGCCGAGCAAGGCGGATACTGATCCTCAACAGGCTTCTTTCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
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| 3UTR-3UTR CAA 90 bp | AGAGCAATGAGAATGTCCTCTTTTCCTGTGGCACTGCTGGCCAAGGTGTCAGGGAGCCAGGGCTTCAGCTaGTCATCGATGATGATGTCG | + |
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Preference number: 3 (lower is better) Translates to: RAMRMSSFPVALLAKVSGSQGFS*SSMMMS Trigger: CGACATCATCATCGATGACAAGCTGAAGCCCTGGCT...CCCTGACACCTTGGCCAGCAGTGCCACAGGAAAAGAGGACATTCTCATTGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
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| 3UTR TCA 72 bp | TGTGTGTGTGTGTGCATGTGTGCACTTGCAAGTGCTTaGGCCCCAGTGATGTGGACTCCTCCACCTTGCATT | + |
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Preference number: 3 (lower is better) Translates to: CVCVCMCALASA*APVMWTPPPCI Trigger: AATGCAAGGTGGAGGAGTCCACATCACTGGGGCTCAAGCACTTGCAAGTGCACACATGCACACACACACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
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| 3UTR TCA 72 bp | TGTGCATGTGTGCACTTGCAAGTGCTTGAGCCCCAGTaGTGTGGACTCCTCCACCTTGCATTGAGTCTTTAT | + |
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Preference number: 3 (lower is better) Translates to: CACVHLQVLEPQ*CGLLHLALSLY Trigger: ATAAAGACTCAATGCAAGGTGGAGGAGTCCACATCACTGGGGCTCAAGCACTTGCAAGTGCACACATGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
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| 3UTR TCA 72 bp | CTTCCAAATCATGCCTTAACACATGCGGGAGAGCAATaGGAATGTCCTCTTTTCCTGTGGCACTGCTGGCCA | + |
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Preference number: 3 (lower is better) Translates to: LPNHALTHAGEQ*ECPLFLWHCWP Trigger: TGGCCAGCAGTGCCACAGGAAAAGAGGACATTCTCATTGCTCTCCCGCATGTGTTAAGGCATGATTTGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
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| 3UTR TCA 72 bp | CAGCTGCCTCACCCATACCCAAGGCTTTCCCCACCATaGAGAATTGTAGCCTCAAACCAAATAAAGCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: QLPHPYPRLSPP*RIVASNQIKPS Trigger: GGAAGGCTTTATTTGGTTTGAGGCTACAATTCTTCATGGTGGGGAAAGCCTTGGGTATGGGTGAGGCAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
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| 3UTR GCA 72 bp | GCAGACGGACTCACTTCCAAATCATGCCTTAACACATaGGGGAGAGCAATGAGAATGTCCTCTTTTCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: ADGLTSKSCLNT*GRAMRMSSFPV Trigger: CACAGGAAAAGAGGACATTCTCATTGCTCTCCCGCATGTGTTAAGGCATGATTTGGAAGTGAGTCCGTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
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| 3UTR CCA 72 bp | AGTCTTTATTTACAAGGCCTGCTCAGGAAAGCACTCTaGAAAACTGAAATTCCAAAACGGGTGTTTAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: SLYLQGLLRKAL*KTEIPKRVFSR Trigger: CCTGCTAAACACCCGTTTTGGAATTTCAGTTTTCCAGAGTGCTTTCCTGAGCAGGCCTTGTAAATAAAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGCATGTGTGCACTTGCAAGTGCTTGAGCCCCAGTGATGTGTCGAGCGGCCTGCTCTaGGCCCCACTGGCTGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: VCVCVHVCTCKCLSPSDVSSGLL*APLAGL Trigger: CAGGCCAGCCAGTGGGGCCCAGAGCAGGCCGCTCGA...CACATCACTGGGGCTCAAGCACTTGCAAGTGCACACATGCACACACACACACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGCATGTGTGCACTTGCAAGTGCTTGAGCCCCAGTGATGTGGTCTCTCGAGCGGCCTaGTCTGGGCCCCACTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: VCVCVHVCTCKCLSPSDVVSRAA*SGPHWL Trigger: CAGCCAGTGGGGCCCAGAGCAGGCCGCTCGAGAGAC...CACATCACTGGGGCTCAAGCACTTGCAAGTGCACACATGCACACACACACACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
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| CDS-3UTR GCA 90 bp | GAGGGAAGACACACCCTGATCGTGAGTGACATCATCCCACAGGCTGGGGCACTGTCACCATCAGGTCCTTaGGGGTCAGCTCGTAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: EGRHTLIVSDIIPQAGALSPSGP*GSARSG Trigger: ACCACTACGAGCTGACCCGCAAGGACCTGATGGTGA...CAGTGCCCCAGCCTGTGGGATGATGTCACTCACGATCAGGGTGTGTCTTCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGCATGTGTGCACTTGCAAGTGCTTGAGCCCCAGTGATGTGCCTCTCGGCCTCGGGTaGTCTCCAGGTAGAGACGCA | + |
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Preference number: 4 (lower is better) Translates to: VCVCVHVCTCKCLSPSDVPLGLG*SPGRDA Trigger: TGCGTCTCTACCTGGAGAGCACCCGAGGCCGAGAGG...CACATCACTGGGGCTCAAGCACTTGCAAGTGCACACATGCACACACACACACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
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| CDS-3UTR CCA 90 bp | GGAAAGCACTCTGGAAAACTGAAATTCCAAAACGGGTGTTTAGCAGGGACTGGGTCGAGCGGCCTGCTCTaGGCCCCACTGGCTGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: GKHSGKLKFQNGCLAGTGSSGLL*APLAGL Trigger: CAGGCCAGCCAGTGGGGCCCAGAGCAGGCCGCTCGA...CCCAGTCCCTGCTAAACACCCGTTTTGGAATTTCAGTTTTCCAGAGTGCTTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
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| CDS-3UTR GCA 90 bp | CGTGCGTGCGTGCGTGTGTGTGTGTGTGTGTGCATGTGTGCACTTGCAAGTGCTTCACCATCAGGTCCTTaGGGGTCAGCTCGTAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: RACVRVCVCVCMCALASASPSGP*GSARSG Trigger: ACCACTACGAGCTGACCCGCAAGGACCTGATGGTGA...AGCACTTGCAAGTGCACACATGCACACACACACACACACACGCACGCACGCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
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| CDS-3UTR CCA 90 bp | CCTGTTGAGGATCAGTATCCGCCTTGCTCGGCTTCAGCTCTGACAGATGTGCTCCATCAAACAGCTTGCTaGTCACCTCTCGGCCTCGGG | + |
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Preference number: 4 (lower is better) Translates to: PVEDQYPPCSASALTDVLHQTAC*SPLGLG Trigger: CCCGAGGCCGAGAGGTGACCAGCAAGCTGTTTGATG...GAGCACATCTGTCAGAGCTGAAGCCGAGCAAGGCGGATACTGATCCTCAACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
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| CDS-3UTR CCA 90 bp | AGGCCAGCCTGGTCTACATGGCAAGTTCCAGGCCATCCAGAGGTACCTATCTCACATCAAACAGCTTGCTaGTCACCTCTCGGCCTCGGG | + |
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Preference number: 4 (lower is better) Translates to: RPAWSTWQVPGHPEVPISHQTAC*SPLGLG Trigger: CCCGAGGCCGAGAGGTGACCAGCAAGCTGTTTGATG...TGAGATAGGTACCTCTGGATGGCCTGGAACTTGCCATGTAGACCAGGCTGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
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| 3UTR CAA 72 bp | GGCTGGGGCACTGAGCTGAAGGAAGAAAGAAGCCTGTaGAGGATCAGTATCCGCCTTGCTCGGCTTCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: GWGTELKEERSL*RISIRLARLQL Trigger: GAGCTGAAGCCGAGCAAGGCGGATACTGATCCTCAACAGGCTTCTTTCTTCCTTCAGCTCAGTGCCCCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
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| CDS-3UTR TCA 90 bp | TTTTCCTGTGGCACTGCTGGCCAAGGTGTCAGGGCTGTGCGTTACCTCGATCAGACTTCTCAATGTCAGTaGCCCACTTCACCCTTCCCG | + |
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Preference number: 4 (lower is better) Translates to: FSCGTAGQGVRAVRYLDQTSQCQ*PTSPFP Trigger: CGGGAAGGGTGAAGTGGGTCACTGACATTGAGAAGT...CTGATCGAGGTAACGCACAGCCCTGACACCTTGGCCAGCAGTGCCACAGGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
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| CDS-3UTR GCA 90 bp | ACAGTCCAGCGGTATCTCAGGGTAACTCTGGGAGTGTTTCCAGAGAAGTCTAACCCTCTCGGCCTCGGGTaGTCTCCAGGTAGAGACGCA | + |
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Preference number: 4 (lower is better) Translates to: TVQRYLRVTLGVFPEKSNPLGLG*SPGRDA Trigger: TGCGTCTCTACCTGGAGAGCACCCGAGGCCGAGAGG...GTTAGACTTCTCTGGAAACACTCCCAGAGTTACCCTGAGATACCGCTGGACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
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| CDS-3UTR GCA 90 bp | CCACCTTGCATTGAGTCTTTATTTACAAGGCCTGCTCAGGAAAGCACTCTGGAAGTCTCTCGAGCGGCCTaGTCTGGGCCCCACTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: PPCIESLFTRPAQESTLEVSRAA*SGPHWL Trigger: CAGCCAGTGGGGCCCAGAGCAGGCCGCTCGAGAGAC...TTCCAGAGTGCTTTCCTGAGCAGGCCTTGTAAATAAAGACTCAATGCAAGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
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| CDS-3UTR CCA 90 bp | GTGCGTGCGTGTGTGTGTGTGTGTGTGCATGTGTGCACTTGCAAGTGCTTGAGCTCCTCCCCATGCTTCTaGATGGCCACGTTGGTAAGG | + |
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Preference number: 4 (lower is better) Translates to: VRACVCVCVHVCTCKCLSSSPCF*MATLVR Trigger: CCTTACCAACGTGGCCATCCAGAAGCATGGGGAGGA...GCTCAAGCACTTGCAAGTGCACACATGCACACACACACACACACACGCACGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
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| CDS-3UTR CCA 90 bp | CATGTGTGCACTTGCAAGTGCTTGAGCCCCAGTGATGTGGACTCCTCCACCTTGGTCGTTGTTCATCACTaGCGCCACGGCCTTGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: HVCTCKCLSPSDVDSSTLVVVHH*RHGLER Trigger: TCTCTCAAGGCCGTGGCGCCAGTGATGAACAACGAC...CAAGGTGGAGGAGTCCACATCACTGGGGCTCAAGCACTTGCAAGTGCACACATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
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| CDS-3UTR CCA 90 bp | CCTCCACCTTGCATTGAGTCTTTATTTACAAGGCCTGCTCAGGAAAGCACTCTGTGCTCTGGGCCCCACTaGCTGGCCTGGGCGGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: PPPCIESLFTRPAQESTLCSGPH*LAWAVS Trigger: AGAAACCGCCCAGGCCAGCCAGTGGGGCCCAGAGCA...CAGAGTGCTTTCCTGAGCAGGCCTTGTAAATAAAGACTCAATGCAAGGTGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
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| CDS-3UTR TCA 90 bp | CATGTGTGCACTTGCAAGTGCTTGAGCCCCAGTGATGTGGACTCCTCCACCTTGACTTCTCAATGTCAGTaGCCCACTTCACCCTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: HVCTCKCLSPSDVDSSTLTSQCQ*PTSPFP Trigger: CGGGAAGGGTGAAGTGGGTCACTGACATTGAGAAGT...CAAGGTGGAGGAGTCCACATCACTGGGGCTCAAGCACTTGCAAGTGCACACATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR GCA 90 bp | GAGGGAAGACACACCCTGATCGTGAGTGACATCATCCCACAGGCTGGGGCACTGGATGCCTTTTCCCTGTaGTTTGCCACATGGCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: EGRHTLIVSDIIPQAGALDAFSL*FATWLH Trigger: ATGAAGCCATGTGGCAAAGCACAGGGAAAAGGCATC...CAGTGCCCCAGCCTGTGGGATGATGTCACTCACGATCAGGGTGTGTCTTCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
||
| CDS-3UTR GCA 90 bp | TGCGTGTGTGTGTGTGTGTGTGCATGTGTGCACTTGCAAGTGCTTGAGCCCCAGCAAACGAGGACGTCTTaGTGTCCCGGGACCACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCACVHLQVLEPQQTRTS*CPGTTF Trigger: AAAAGTGGTCCCGGGACAGCAAGACGTCCTCGTTTG...CTGGGGCTCAAGCACTTGCAAGTGCACACATGCACACACACACACACACACGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGACTCCTCCACCTTGCATTGAGTCTTTATTTACAAGGCCTGCTCAGGAAATGCTCTGGGCCCCACTaGCTGGCCTGGGCGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CGLLHLALSLYLQGLLRKCSGPH*LAWAVS Trigger: AGAAACCGCCCAGGCCAGCCAGTGGGGCCCAGAGCA...TTTCCTGAGCAGGCCTTGTAAATAAAGACTCAATGCAAGGTGGAGGAGTCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR TCA 90 bp | GGAAAGCACTCTGGAAAACTGAAATTCCAAAACGGGTGTTTAGCAGGGACTGGGGAGGACACTTCTTCCTaGGTCTCTCGAGCGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GKHSGKLKFQNGCLAGTGEDTSS*VSRAAC Trigger: GCAGGCCGCTCGAGAGACTCAGGAAGAAGTGTCCTC...CCCAGTCCCTGCTAAACACCCGTTTTGGAATTTCAGTTTTCCAGAGTGCTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR TCA 90 bp | TGTGGACTCCTCCACCTTGCATTGAGTCTTTATTTACAAGGCCTGCTCAGGAAAGAGGACACTTCTTCCTaGGTCTCTCGAGCGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CGLLHLALSLYLQGLLRKEDTSS*VSRAAC Trigger: GCAGGCCGCTCGAGAGACTCAGGAAGAAGTGTCCTC...TTTCCTGAGCAGGCCTTGTAAATAAAGACTCAATGCAAGGTGGAGGAGTCCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR GCA 90 bp | AAGGCCTGCTCAGGAAAGCACTCTGGAAAACTGAAATTCCAAAACGGGTGTTTACCTCTCGGCCTCGGGTaGTCTCCAGGTAGAGACGCA | + |
|
Preference number: 4 (lower is better) Translates to: KACSGKHSGKLKFQNGCLPLGLG*SPGRDA Trigger: TGCGTCTCTACCTGGAGAGCACCCGAGGCCGAGAGG...TAAACACCCGTTTTGGAATTTCAGTTTTCCAGAGTGCTTTCCTGAGCAGGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCCCTGCTGTATGGTGTATATCTTCTCATTTCTAGGTCAGCCACCACTACATGCCACATGGCTTCATaGTCCAGGTGCTGGACGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KALLYGVYLLISRSATTTCHMAS*SRCWTG Trigger: GCCCGTCCAGCACCTGGATCATGAAGCCATGTGGCA...TGTAGTGGTGGCTGACCTAGAAATGAGAAGATATACACCATACAGCAGGGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
||
| CDS-3UTR TCA 90 bp | GGAAAGCACTCTGGAAAACTGAAATTCCAAAACGGGTGTTTAGCAGGGACTGGGAGAGACGCAGGTTGTTaGCAGTCCACTTGCCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: GKHSGKLKFQNGCLAGTGRDAGC*QSTCHR Trigger: ACGGTGGCAAGTGGACTGTCAACAACCTGCGTCTCT...CCCAGTCCCTGCTAAACACCCGTTTTGGAATTTCAGTTTTCCAGAGTGCTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTTCAGCTTGTCATCGATGATGATGTCGTAGCCGTAGCATTCAAAGCAGTGCAAACGAGGACGTCTTaGTGTCCCGGGACCACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GLQLVIDDDVVAVAFKAVQTRTS*CPGTTF Trigger: AAAAGTGGTCCCGGGACAGCAAGACGTCCTCGTTTG...CACTGCTTTGAATGCTACGGCTACGACATCATCATCGATGACAAGCTGAAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
||
| CDS-3UTR CCA 90 bp | ATGTGCTCAGCTGCCTCACCCATACCCAAGGCTTTCCCCACCATGAAGAATTGTCTGTGCTTTGCCACATaGCTTCATGATCCAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MCSAASPIPKAFPTMKNCLCFAT*LHDPGA Trigger: AGCACCTGGATCATGAAGCCATGTGGCAAAGCACAG...ACAATTCTTCATGGTGGGGAAAGCCTTGGGTATGGGTGAGGCAGCTGAGCACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCACTCTGGAAAACTGAAATTCCAAAACGGGTGTTTAGCAGGGACTGGGTGTCACCATCAGGTCCTTaGGGGTCAGCTCGTAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KALWKTEIPKRVFSRDWVSPSGP*GSARSG Trigger: ACCACTACGAGCTGACCCGCAAGGACCTGATGGTGA...CACCCAGTCCCTGCTAAACACCCGTTTTGGAATTTCAGTTTTCCAGAGTGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR GCA 90 bp | GGAAAGCACTCTGGAAAACTGAAATTCCAAAACGGGTGTTTAGCAGGGACTGGGCAAACGAGGACGTCTTaGTGTCCCGGGACCACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GKHSGKLKFQNGCLAGTGQTRTS*CPGTTF Trigger: AAAAGTGGTCCCGGGACAGCAAGACGTCCTCGTTTG...CCCAGTCCCTGCTAAACACCCGTTTTGGAATTTCAGTTTTCCAGAGTGCTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCAGGGCTTCAGCTTGTCATCGATGATGATGTCGTAGCCGTAGCATTCAAAACGGCCTTGAGAGACTaGACGATGATCCAGTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: QPGLQLVIDDDVVAVAFKTALRD*TMIQWI Trigger: AATCCACTGGATCATCGTGCAGTCTCTCAAGGCCGT...TTTGAATGCTACGGCTACGACATCATCATCGATGACAAGCTGAAGCCCTGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
||
| CDS-3UTR CCA 90 bp | CACCTTGCATTGAGTCTTTATTTACAAGGCCTGCTCAGGAAAGCACTCTGGAAACATCAAACAGCTTGCTaGTCACCTCTCGGCCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: HLALSLYLQGLLRKALWKHQTAC*SPLGLG Trigger: CCCGAGGCCGAGAGGTGACCAGCAAGCTGTTTGATG...TTTCCAGAGTGCTTTCCTGAGCAGGCCTTGTAAATAAAGACTCAATGCAAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR TCA 90 bp | TGTGGACTCCTCCACCTTGCATTGAGTCTTTATTTACAAGGCCTGCTCAGGAAAACTTCTCAATGTCAGTaGCCCACTTCACCCTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: CGLLHLALSLYLQGLLRKTSQCQ*PTSPFP Trigger: CGGGAAGGGTGAAGTGGGTCACTGACATTGAGAAGT...TTTCCTGAGCAGGCCTTGTAAATAAAGACTCAATGCAAGGTGGAGGAGTCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR TCA 90 bp | AAGGCCTGCTCAGGAAAGCACTCTGGAAAACTGAAATTCCAAAACGGGTGTTTAAGAGACGCAGGTTGTTaGCAGTCCACTTGCCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: KACSGKHSGKLKFQNGCLRDAGC*QSTCHR Trigger: ACGGTGGCAAGTGGACTGTCAACAACCTGCGTCTCT...TAAACACCCGTTTTGGAATTTCAGTTTTCCAGAGTGCTTTCCTGAGCAGGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR TCA 90 bp | GTGTATATCTTCTCATTTCTAGGTCAGCCACCACTACACCCTCTCTGCTTCAAAAGAGACGCAGGTTGTTaGCAGTCCACTTGCCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: VYIFSFLGQPPLHPLCFKRDAGC*QSTCHR Trigger: ACGGTGGCAAGTGGACTGTCAACAACCTGCGTCTCT...TTTGAAGCAGAGAGGGTGTAGTGGTGGCTGACCTAGAAATGAGAAGATATACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCCTGCTCAGGAAAGCACTCTGGAAAACTGAAATTCCAAAACGGGTGTTTATCCTCCCCATGCTTCTaGATGGCCACGTTGGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KACSGKHSGKLKFQNGCLSSPCF*MATLVR Trigger: CCTTACCAACGTGGCCATCCAGAAGCATGGGGAGGA...TAAACACCCGTTTTGGAATTTCAGTTTTCCAGAGTGCTTTCCTGAGCAGGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CCA 90 bp | GTGTATATCTTCTCATTTCTAGGTCAGCCACCACTACACCCTCTCTGCTTCAAATCCTCCCCATGCTTCTaGATGGCCACGTTGGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VYIFSFLGQPPLHPLCFKSSPCF*MATLVR Trigger: CCTTACCAACGTGGCCATCCAGAAGCATGGGGAGGA...TTTGAAGCAGAGAGGGTGTAGTGGTGGCTGACCTAGAAATGAGAAGATATACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
||
| CDS-3UTR TCA 90 bp | TTTATTTACAAGGCCTGCTCAGGAAAGCACTCTGGAAAACTGAAATTCCAAAACTGCCACATGGCTTCATaGTCCAGGTGCTGGACGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FIYKACSGKHSGKLKFQNCHMAS*SRCWTG Trigger: GCCCGTCCAGCACCTGGATCATGAAGCCATGTGGCA...GTTTTGGAATTTCAGTTTTCCAGAGTGCTTTCCTGAGCAGGCCTTGTAAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR GCA 90 bp | CTCAGGAAAGCACTCTGGAAAACTGAAATTCCAAAACGGGTGTTTAGCAGGGACACGGCCTTGAGAGACTaGACGATGATCCAGTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: LRKALWKTEIPKRVFSRDTALRD*TMIQWI Trigger: AATCCACTGGATCATCGTGCAGTCTCTCAAGGCCGT...GTCCCTGCTAAACACCCGTTTTGGAATTTCAGTTTTCCAGAGTGCTTTCCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGACTCCTCCACCTTGCATTGAGTCTTTATTTACAAGGCCTGCTCAGGAAATGCCAAGTACTTCCTTaGGGGGAGACTTGTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: CGLLHLALSLYLQGLLRKCQVLP*GETCST Trigger: AGTGGAACAAGTCTCCCCCCAAGGAAGTACTTGGCA...TTTCCTGAGCAGGCCTTGTAAATAAAGACTCAATGCAAGGTGGAGGAGTCCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR GCA 90 bp | CCACCTTGCATTGAGTCTTTATTTACAAGGCCTGCTCAGGAAAGCACTCTGGAAGATGCCTTTTCCCTGTaGTTTGCCACATGGCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PPCIESLFTRPAQESTLEDAFSL*FATWLH Trigger: ATGAAGCCATGTGGCAAAGCACAGGGAAAAGGCATC...TTCCAGAGTGCTTTCCTGAGCAGGCCTTGTAAATAAAGACTCAATGCAAGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR GCA 90 bp | AAGGCCTGCTCAGGAAAGCACTCTGGAAAACTGAAATTCCAAAACGGGTGTTTAACGGCCTTGAGAGACTaGACGATGATCCAGTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: KACSGKHSGKLKFQNGCLTALRD*TMIQWI Trigger: AATCCACTGGATCATCGTGCAGTCTCTCAAGGCCGT...TAAACACCCGTTTTGGAATTTCAGTTTTCCAGAGTGCTTTCCTGAGCAGGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCCTGCTCAGGAAAGCACTCTGGAAAACTGAAATTCCAAAACGGGTGTTTAAAATGGTTGACGATCTaGTCGTCTGACAGCCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KACSGKHSGKLKFQNGCLKWLTI*SSDSRY Trigger: GTACCGGCTGTCAGACGACCAGATCGTCAACCATTT...TAAACACCCGTTTTGGAATTTCAGTTTTCCAGAGTGCTTTCCTGAGCAGGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCCCTGCTGTATGGTGTATATCTTCTCATTTCTAGGTCAGCCACCACTACAAAATGGTTGACGATCTaGTCGTCTGACAGCCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KALLYGVYLLISRSATTTKWLTI*SSDSRY Trigger: GTACCGGCTGTCAGACGACCAGATCGTCAACCATTT...TGTAGTGGTGGCTGACCTAGAAATGAGAAGATATACACCATACAGCAGGGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
||
| CDS-3UTR CCA 90 bp | CACCTTGCATTGAGTCTTTATTTACAAGGCCTGCTCAGGAAAGCACTCTGGAAAAAATGGTTGACGATCTaGTCGTCTGACAGCCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HLALSLYLQGLLRKALWKKWLTI*SSDSRY Trigger: GTACCGGCTGTCAGACGACCAGATCGTCAACCATTT...TTTCCAGAGTGCTTTCCTGAGCAGGCCTTGTAAATAAAGACTCAATGCAAGGTG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CCA 90 bp | CACCTTGCATTGAGTCTTTATTTACAAGGCCTGCTCAGGAAAGCACTCTGGAAACTGTGCTTTGCCACATaGCTTCATGATCCAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLALSLYLQGLLRKALWKLCFAT*LHDPGA Trigger: AGCACCTGGATCATGAAGCCATGTGGCAAAGCACAG...TTTCCAGAGTGCTTTCCTGAGCAGGCCTTGTAAATAAAGACTCAATGCAAGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTTACAAGGCCTGCTCAGGAAAGCACTCTGGAAAACTGAAATTCCAAAACGTCGTTGTTCATCACTaGCGCCACGGCCTTGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FIYKACSGKHSGKLKFQNVVVHH*RHGLER Trigger: TCTCTCAAGGCCGTGGCGCCAGTGATGAACAACGAC...GTTTTGGAATTTCAGTTTTCCAGAGTGCTTTCCTGAGCAGGCCTTGTAAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTTACAAGGCCTGCTCAGGAAAGCACTCTGGAAAACTGAAATTCCAAAACTGCCAAGTACTTCCTTaGGGGGAGACTTGTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: FIYKACSGKHSGKLKFQNCQVLP*GETCST Trigger: AGTGGAACAAGTCTCCCCCCAAGGAAGTACTTGGCA...GTTTTGGAATTTCAGTTTTCCAGAGTGCTTTCCTGAGCAGGCCTTGTAAATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS TCA 90 bp | TCACCTCTCGGCCTCGGGTGCTCTCCAGGTAGAGACGCAGGTTGTTaGCAGTCCACTTGCCACCGTGGATGTGGTTGTAGTCCTCCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SPLGLGCSPGRDAGC*QSTCHRGCGCSPPH Trigger: ATGGGGAGGACTACAACCACATCCACGGTGGCAAGTGGACTGTCAACAACCTGCGTCTCTACCTGGAGAGCACCCGAGGCCGAGAGGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016897.12 ENSMUST00000109479.8 ENSMUST00000109480.8 |
||
| CDS CCA 90 bp | TTCATCACTGGCGCCACGGCCTTGAGAGACTGCACGATGATCCAGTaGATTTCATCAAACAGCTTGCTGGTCACCTCTCGGCCTCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FITGATALRDCTMIQ*ISSNSLLVTSRPRV Trigger: CACCCGAGGCCGAGAGGTGACCAGCAAGCTGTTTGATGAAATCCACTGGATCATCGTGCAGTCTCTCAAGGCCGTGGCGCCAGTGATGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CAA 90 bp | GAGGGAAGACACACCCTGATCGTGAGTGACATCATCCCACAGGCTGGGGCACTGTTCTGGATGGCCACGTaGGTAAGGTGGACAAACATG | + |
|
Preference number: 5 (lower is better) Translates to: EGRHTLIVSDIIPQAGALFWMAT*VRWTNM Trigger: CATGTTTGTCCACCTTACCAACGTGGCCATCCAGAA...CAGTGCCCCAGCCTGTGGGATGATGTCACTCACGATCAGGGTGTGTCTTCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
||
| CDS-3UTR CAA 90 bp | CGTGCGTGCGTGCGTGTGTGTGTGTGTGTGTGCATGTGTGCACTTGCAAGTGCTTTGTTGACAGTCCACTaGCCACCGTGGATGTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RACVRVCVCVCMCALASALLTVH*PPWMWL Trigger: CAACCACATCCACGGTGGCAAGTGGACTGTCAACAA...AGCACTTGCAAGTGCACACATGCACACACACACACACACACGCACGCACGCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCCTGTGGCACTGCTGGCCAAGGTGTCAGGGCTGTGCGTTACCTCGATCAGTTGTTGACAGTCCACTaGCCACCGTGGATGTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FSCGTAGQGVRAVRYLDQLLTVH*PPWMWL Trigger: CAACCACATCCACGGTGGCAAGTGGACTGTCAACAA...CTGATCGAGGTAACGCACAGCCCTGACACCTTGGCCAGCAGTGCCACAGGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
||
| CDS TCA 90 bp | GGTCAGCTCGTAGTGGTTGGGGAAATGGTTGACGATCTGGTCGTCTaGCAGCCGGTACCCAGTTTCTACGCTGAACACGTTGCGAATGGT | + |
|
Preference number: 5 (lower is better) Translates to: GQLVVVGEMVDDLVV*QPVPSFYAEHVANG Trigger: ACCATTCGCAACGTGTTCAGCGTAGAAACTGGGTACCGGCTGTCAGACGACCAGATCGTCAACCATTTCCCCAACCACTACGAGCTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016897.12 ENSMUST00000109479.8 ENSMUST00000109480.8 ENSMUST00000154401.8 |
||
| CDS CCA 90 bp | CCAGCTCCTCGTCATACAGGATCTCATAGTTGCCAAGTACTTCCTTaGGGGGAGACTTGTTCCACTTGCAGTCGGGAATCTCGCCGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PAPRHTGSHSCQVLP*GETCSTCSRESRRW Trigger: CCAACGGCGAGATTCCCGACTGCAAGTGGAACAAGTCTCCCCCCAAGGAAGTACTTGGCAACTATGAGATCCTGTATGACGAGGAGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CAA 90 bp | GTGCGTGCGTGTGTGTGTGTGTGTGTGCATGTGTGCACTTGCAAGTGCTTGAGCTCTACGCTGAACACGTaGCGAATGGTTTGCACGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VRACVCVCVHVCTCKCLSSTLNT*RMVCTL Trigger: GAGCGTGCAAACCATTCGCAACGTGTTCAGCGTAGA...GCTCAAGCACTTGCAAGTGCACACATGCACACACACACACACACACGCACGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CAA 90 bp | GGATCAGTATCCGCCTTGCTCGGCTTCAGCTCTGACAGATGTGCTCAGCTGCCTCCTTTTCCCTGTGCTTaGCCACATGGCTTCATGATC | + |
|
Preference number: 5 (lower is better) Translates to: GSVSALLGFSSDRCAQLPPFPCA*PHGFMI Trigger: GATCATGAAGCCATGTGGCAAAGCACAGGGAAAAGG...AGGCAGCTGAGCACATCTGTCAGAGCTGAAGCCGAGCAAGGCGGATACTGATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTAGGCCAGCCTGGTCTACATGGCAAGTTCCAGGCCATCCAGAGGTACCTAAGCCAGGGCTTCAGCTaGTCATCGATGATGATGTCG | + |
|
Preference number: 5 (lower is better) Translates to: VLGQPGLHGKFQAIQRYLSQGFS*SSMMMS Trigger: CGACATCATCATCGATGACAAGCTGAAGCCCTGGCT...TAGGTACCTCTGGATGGCCTGGAACTTGCCATGTAGACCAGGCTGGCCTAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CAA 90 bp | CCACCTTGCATTGAGTCTTTATTTACAAGGCCTGCTCAGGAAAGCACTCTGGAAAGAGACGGGGACGCGTaGACCTCGATCAGCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PPCIESLFTRPAQESTLERDGDA*TSISQG Trigger: GCCCTGGCTGATCGAGGTCAACGCGTCCCCGTCTCT...TTCCAGAGTGCTTTCCTGAGCAGGCCTTGTAAATAAAGACTCAATGCAAGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGACTCCTCCACCTTGCATTGAGTCTTTATTTACAAGGCCTGCTCAGGAAAAGAGACGGGGACGCGTaGACCTCGATCAGCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CGLLHLALSLYLQGLLRKRDGDA*TSISQG Trigger: GCCCTGGCTGATCGAGGTCAACGCGTCCCCGTCTCT...TTTCCTGAGCAGGCCTTGTAAATAAAGACTCAATGCAAGGTGGAGGAGTCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTAGGCCAGCCTGGTCTACATGGCAAGTTCCAGGCCATCCAGAGGTACCTACCTTTTCCCTGTGCTTaGCCACATGGCTTCATGATC | + |
|
Preference number: 5 (lower is better) Translates to: VLGQPGLHGKFQAIQRYLPFPCA*PHGFMI Trigger: GATCATGAAGCCATGTGGCAAAGCACAGGGAAAAGG...TAGGTACCTCTGGATGGCCTGGAACTTGCCATGTAGACCAGGCTGGCCTAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CAA 90 bp | CATGTGTGCACTTGCAAGTGCTTGAGCCCCAGTGATGTGGACTCCTCCACCTTGCCTTTTCCCTGTGCTTaGCCACATGGCTTCATGATC | + |
|
Preference number: 5 (lower is better) Translates to: HVCTCKCLSPSDVDSSTLPFPCA*PHGFMI Trigger: GATCATGAAGCCATGTGGCAAAGCACAGGGAAAAGG...CAAGGTGGAGGAGTCCACATCACTGGGGCTCAAGCACTTGCAAGTGCACACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CAA 90 bp | ATGTGCTCAGCTGCCTCACCCATACCCAAGGCTTTCCCCACCATGAAGAATTGTACAAACGAGGACGTCTaGCTGTCCCGGGACCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: MCSAASPIPKAFPTMKNCTNEDV*LSRDHF Trigger: AAAGTGGTCCCGGGACAGCAAGACGTCCTCGTTTGT...ACAATTCTTCATGGTGGGGAAAGCCTTGGGTATGGGTGAGGCAGCTGAGCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
||
| CDS-3UTR CAA 90 bp | GTGCGTGCGTGTGTGTGTGTGTGTGTGCATGTGTGCACTTGCAAGTGCTTGAGCATTTCATCAAACAGCTaGCTGGTCACCTCTCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VRACVCVCVHVCTCKCLSISSNS*LVTSRP Trigger: AGGCCGAGAGGTGACCAGCAAGCTGTTTGATGAAAT...GCTCAAGCACTTGCAAGTGCACACATGCACACACACACACACACACGCACGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CAA 90 bp | GGAAAGCACTCTGGAAAACTGAAATTCCAAAACGGGTGTTTAGCAGGGACTGGGACTGGCGCCACGGCCTaGAGAGACTGCACGATGATC | + |
|
Preference number: 5 (lower is better) Translates to: GKHSGKLKFQNGCLAGTGTGATA*RDCTMI Trigger: GATCATCGTGCAGTCTCTCAAGGCCGTGGCGCCAGT...CCCAGTCCCTGCTAAACACCCGTTTTGGAATTTCAGTTTTCCAGAGTGCTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS GCA 90 bp | CAGTGTTTGTCGTTGTTCATCACTGGCGCCACGGCCTTGAGAGACTaGACGATGATCCAGTGGATTTCATCAAACAGCTTGCTGGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: QCLSLFITGATALRD*TMIQWISSNSLLVT Trigger: GGTGACCAGCAAGCTGTTTGATGAAATCCACTGGATCATCGTGCAGTCTCTCAAGGCCGTGGCGCCAGTGATGAACAACGACAAACACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCCTGTGGCACTGCTGGCCAAGGTGTCAGGGCTGTGCGTTACCTCGATCAGTTCATTTTCTGTCACTaGGATCCACCCTCTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FSCGTAGQGVRAVRYLDQFIFCH*DPPSLL Trigger: GAGAAGAGAGGGTGGATCCAAGTGACAGAAAATGAA...CTGATCGAGGTAACGCACAGCCCTGACACCTTGGCCAGCAGTGCCACAGGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
||
| CDS CCA 90 bp | AAGCTTATTGATGAGGAAGATGCCTTTTCCCTGTGCTTTGCCACATaGCTTCATGATCCAGGTGCTGGACGGGCTCTTCCGGAACTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KLIDEEDAFSLCFAT*LHDPGAGRALPELF Trigger: GAAGAGTTCCGGAAGAGCCCGTCCAGCACCTGGATCATGAAGCCATGTGGCAAAGCACAGGGAAAAGGCATCTTCCTCATCAATAAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016897.12 ENSMUST00000109479.8 ENSMUST00000109480.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCAGCCTGGTCTACATGGCAAGTTCCAGGCCATCCAGAGGTACCTATCTCATTCATTTTCTGTCACTaGGATCCACCCTCTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RPAWSTWQVPGHPEVPISFIFCH*DPPSLL Trigger: GAGAAGAGAGGGTGGATCCAAGTGACAGAAAATGAA...TGAGATAGGTACCTCTGGATGGCCTGGAACTTGCCATGTAGACCAGGCTGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CAA 90 bp | ACAGTCCAGCGGTATCTCAGGGTAACTCTGGGAGTGTTTCCAGAGAAGTCTAACTCTACGCTGAACACGTaGCGAATGGTTTGCACGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TVQRYLRVTLGVFPEKSNSTLNT*RMVCTL Trigger: GAGCGTGCAAACCATTCGCAACGTGTTCAGCGTAGA...GTTAGACTTCTCTGGAAACACTCCCAGAGTTACCCTGAGATACCGCTGGACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
||
| CDS-3UTR CAA 90 bp | CTCAGGAAAGCACTCTGGAAAACTGAAATTCCAAAACGGGTGTTTAGCAGGGACACAAACGAGGACGTCTaGCTGTCCCGGGACCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: LRKALWKTEIPKRVFSRDTNEDV*LSRDHF Trigger: AAAGTGGTCCCGGGACAGCAAGACGTCCTCGTTTGT...GTCCCTGCTAAACACCCGTTTTGGAATTTCAGTTTTCCAGAGTGCTTTCCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CAA 90 bp | CCTCCACCTTGCATTGAGTCTTTATTTACAAGGCCTGCTCAGGAAAGCACTCTGTTGTTGACAGTCCACTaGCCACCGTGGATGTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PPPCIESLFTRPAQESTLLLTVH*PPWMWL Trigger: CAACCACATCCACGGTGGCAAGTGGACTGTCAACAA...CAGAGTGCTTTCCTGAGCAGGCCTTGTAAATAAAGACTCAATGCAAGGTGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CAA 90 bp | CCTCCACCTTGCATTGAGTCTTTATTTACAAGGCCTGCTCAGGAAAGCACTCTGAGCCAGGGCTTCAGCTaGTCATCGATGATGATGTCG | + |
|
Preference number: 5 (lower is better) Translates to: PPPCIESLFTRPAQESTLSQGFS*SSMMMS Trigger: CGACATCATCATCGATGACAAGCTGAAGCCCTGGCT...CAGAGTGCTTTCCTGAGCAGGCCTTGTAAATAAAGACTCAATGCAAGGTGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS GCA 90 bp | TTTGATCTGCGAAAGCTTATTGATGAGGAAGATGCCTTTTCCCTGTaGTTTGCCACATGGCTTCATGATCCAGGTGCTGGACGGGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FDLRKLIDEEDAFSL*FATWLHDPGAGRAL Trigger: AAGAGCCCGTCCAGCACCTGGATCATGAAGCCATGTGGCAAAGCACAGGGAAAAGGCATCTTCCTCATCAATAAGCTTTCGCAGATCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016897.12 ENSMUST00000109479.8 ENSMUST00000109480.8 |
||
| CDS-3UTR CAA 90 bp | GGCCAGGGAAAAGCCCTGCTGTATGGTGTATATCTTCTCATTTCTAGGTCAGCCAGGTGGACAAACATGTaGTCGAGCTCACTGGTACTA | + |
|
Preference number: 5 (lower is better) Translates to: GQGKALLYGVYLLISRSARWTNM*SSSLVL Trigger: TAGTACCAGTGAGCTCGACAACATGTTTGTCCACCT...GGCTGACCTAGAAATGAGAAGATATACACCATACAGCAGGGCTTTTCCCTGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGCATGTGTGCACTTGCAAGTGCTTGAGCCCCAGTGATGTGATCTGCGAAAGCTTATaGATGAGGAAGATGCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVHVCTCKCLSPSDVICESL*MRKMPF Trigger: AAAAGGCATCTTCCTCATCAATAAGCTTTCGCAGAT...CACATCACTGGGGCTCAAGCACTTGCAAGTGCACACATGCACACACACACACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGACTCCTCCACCTTGCATTGAGTCTTTATTTACAAGGCCTGCTCAGGAAATTCTGGATGGCCACGTaGGTAAGGTGGACAAACATG | + |
|
Preference number: 5 (lower is better) Translates to: CGLLHLALSLYLQGLLRKFWMAT*VRWTNM Trigger: CATGTTTGTCCACCTTACCAACGTGGCCATCCAGAA...TTTCCTGAGCAGGCCTTGTAAATAAAGACTCAATGCAAGGTGGAGGAGTCCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CAA 90 bp | CTCAGGAAAGCACTCTGGAAAACTGAAATTCCAAAACGGGTGTTTAGCAGGGACTTCTGGATGGCCACGTaGGTAAGGTGGACAAACATG | + |
|
Preference number: 5 (lower is better) Translates to: LRKALWKTEIPKRVFSRDFWMAT*VRWTNM Trigger: CATGTTTGTCCACCTTACCAACGTGGCCATCCAGAA...GTCCCTGCTAAACACCCGTTTTGGAATTTCAGTTTTCCAGAGTGCTTTCCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCACTCTGGAAAACTGAAATTCCAAAACGGGTGTTTAGCAGGGACTGGGTGATTTCATCAAACAGCTaGCTGGTCACCTCTCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KALWKTEIPKRVFSRDWVISSNS*LVTSRP Trigger: AGGCCGAGAGGTGACCAGCAAGCTGTTTGATGAAAT...CACCCAGTCCCTGCTAAACACCCGTTTTGGAATTTCAGTTTTCCAGAGTGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CAA 90 bp | TTTATTTACAAGGCCTGCTCAGGAAAGCACTCTGGAAAACTGAAATTCCAAAACACTGGCGCCACGGCCTaGAGAGACTGCACGATGATC | + |
|
Preference number: 5 (lower is better) Translates to: FIYKACSGKHSGKLKFQNTGATA*RDCTMI Trigger: GATCATCGTGCAGTCTCTCAAGGCCGTGGCGCCAGT...GTTTTGGAATTTCAGTTTTCCAGAGTGCTTTCCTGAGCAGGCCTTGTAAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCCCTGCTGTATGGTGTATATCTTCTCATTTCTAGGTCAGCCACCACTACAATTTCATCAAACAGCTaGCTGGTCACCTCTCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KALLYGVYLLISRSATTTISSNS*LVTSRP Trigger: AGGCCGAGAGGTGACCAGCAAGCTGTTTGATGAAAT...TGTAGTGGTGGCTGACCTAGAAATGAGAAGATATACACCATACAGCAGGGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
||
| CDS-3UTR CAA 90 bp | TTTATTTACAAGGCCTGCTCAGGAAAGCACTCTGGAAAACTGAAATTCCAAAACACAAACGAGGACGTCTaGCTGTCCCGGGACCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: FIYKACSGKHSGKLKFQNTNEDV*LSRDHF Trigger: AAAGTGGTCCCGGGACAGCAAGACGTCCTCGTTTGT...GTTTTGGAATTTCAGTTTTCCAGAGTGCTTTCCTGAGCAGGCCTTGTAAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CAA 90 bp | AAGGCCTGCTCAGGAAAGCACTCTGGAAAACTGAAATTCCAAAACGGGTGTTTAAGGTGGACAAACATGTaGTCGAGCTCACTGGTACTA | + |
|
Preference number: 5 (lower is better) Translates to: KACSGKHSGKLKFQNGCLRWTNM*SSSLVL Trigger: TAGTACCAGTGAGCTCGACAACATGTTTGTCCACCT...TAAACACCCGTTTTGGAATTTCAGTTTTCCAGAGTGCTTTCCTGAGCAGGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCACTCTGGAAAACTGAAATTCCAAAACGGGTGTTTAGCAGGGACTGGGTGCATTCAAAGCAGTGTTaGTCGTTGTTCATCACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: KALWKTEIPKRVFSRDWVHSKQC*SLFITG Trigger: GCCAGTGATGAACAACGACAAACACTGCTTTGAATG...CACCCAGTCCCTGCTAAACACCCGTTTTGGAATTTCAGTTTTCCAGAGTGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CAA 90 bp | CACCTTGCATTGAGTCTTTATTTACAAGGCCTGCTCAGGAAAGCACTCTGGAAATTCATTTTCTGTCACTaGGATCCACCCTCTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HLALSLYLQGLLRKALWKFIFCH*DPPSLL Trigger: GAGAAGAGAGGGTGGATCCAAGTGACAGAAAATGAA...TTTCCAGAGTGCTTTCCTGAGCAGGCCTTGTAAATAAAGACTCAATGCAAGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CAA 90 bp | GTGTATATCTTCTCATTTCTAGGTCAGCCACCACTACACCCTCTCTGCTTCAAAATCTGCGAAAGCTTATaGATGAGGAAGATGCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VYIFSFLGQPPLHPLCFKICESL*MRKMPF Trigger: AAAAGGCATCTTCCTCATCAATAAGCTTTCGCAGAT...TTTGAAGCAGAGAGGGTGTAGTGGTGGCTGACCTAGAAATGAGAAGATATACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
||
| CDS-3UTR CAA 90 bp | TTTATTTACAAGGCCTGCTCAGGAAAGCACTCTGGAAAACTGAAATTCCAAAACAGGTGGACAAACATGTaGTCGAGCTCACTGGTACTA | + |
|
Preference number: 5 (lower is better) Translates to: FIYKACSGKHSGKLKFQNRWTNM*SSSLVL Trigger: TAGTACCAGTGAGCTCGACAACATGTTTGTCCACCT...GTTTTGGAATTTCAGTTTTCCAGAGTGCTTTCCTGAGCAGGCCTTGTAAATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CAA 90 bp | TTTATTTACAAGGCCTGCTCAGGAAAGCACTCTGGAAAACTGAAATTCCAAAACCATTCAAAGCAGTGTTaGTCGTTGTTCATCACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FIYKACSGKHSGKLKFQNHSKQC*SLFITG Trigger: GCCAGTGATGAACAACGACAAACACTGCTTTGAATG...GTTTTGGAATTTCAGTTTTCCAGAGTGCTTTCCTGAGCAGGCCTTGTAAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS-3UTR CAA 90 bp | TTTATTTACAAGGCCTGCTCAGGAAAGCACTCTGGAAAACTGAAATTCCAAAACATCTGCGAAAGCTTATaGATGAGGAAGATGCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: FIYKACSGKHSGKLKFQNICESL*MRKMPF Trigger: AAAAGGCATCTTCCTCATCAATAAGCTTTCGCAGAT...GTTTTGGAATTTCAGTTTTCCAGAGTGCTTTCCTGAGCAGGCCTTGTAAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS TCA 72 bp | GGCCTCGGGTGCTCTCCAGGTAGAGACGCAGGTTGTTaGCAGTCCACTTGCCACCGTGGATGTGGTTGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: GLGCSPGRDAGC*QSTCHRGCGCS Trigger: ACTACAACCACATCCACGGTGGCAAGTGGACTGTCAACAACCTGCGTCTCTACCTGGAGAGCACCCGAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016897.12 ENSMUST00000109479.8 ENSMUST00000109480.8 |
||
| CDS CCA 72 bp | GGCGCCACGGCCTTGAGAGACTGCACGATGATCCAGTaGATTTCATCAAACAGCTTGCTGGTCACCTCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: GATALRDCTMIQ*ISSNSLLVTSR Trigger: CCGAGAGGTGACCAGCAAGCTGTTTGATGAAATCCACTGGATCATCGTGCAGTCTCTCAAGGCCGTGGCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS CAA 72 bp | GACTGCACGATGATCCAGTGGATTTCATCAAACAGCTaGCTGGTCACCTCTCGGCCTCGGGTGCTCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: DCTMIQWISSNS*LVTSRPRVLSR Trigger: CCTGGAGAGCACCCGAGGCCGAGAGGTGACCAGCAAGCTGTTTGATGAAATCCACTGGATCATCGTGCAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016897.12 ENSMUST00000109479.8 ENSMUST00000109480.8 |
||
| CDS CCA 72 bp | CAAGCTTGTACATGTAGCAGCGCAGCGGGCGGTACGTaGACACCAGGACATACAGACGAAGGTCAAACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: QACTCSSAAGGT*TPGHTDEGQTS Trigger: GGAAGTTTGACCTTCGTCTGTATGTCCTGGTGTCCACGTACCGCCCGCTGCGCTGCTACATGTACAAGCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016897.12 ENSMUST00000109479.8 ENSMUST00000109480.8 |
||
| CDS CCA 72 bp | CACGCCACGGCCTTGAGAGACTGCACGATGATCCAGTaGATTTCATCAAACAGCTTGCTGGTCACCTCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: HATALRDCTMIQ*ISSNSLLVTSR Trigger: CCGAGAGGTGACCAGCAAGCTGTTTGATGAAATCCACTGGATCATCGTGCAGTCTCTCAAGGCCGTGGCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109479.8 |
||
| CDS CAA 72 bp | GGAGACTTGTTCCACTTGCAGTCGGGAATCTCGCCGTaGGGGACCGCAATGTTGAGGGTGTCGTTAATCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GDLFHLQSGISP*GTAMLRVSLIR Trigger: CCTGATTAACGACACCCTCAACATTGCGGTCCCCAACGGCGAGATTCCCGACTGCAAGTGGAACAAGTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS TCA 72 bp | TCTGGTCGTCTGACAGCCGGTACCCAGTTTCTACGCTaGACACGTTGCGAATGGTTTGCACGCTCATCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SGRLTAGTQFLR*TRCEWFARSSS Trigger: ACTGGATGAGCGTGCAAACCATTCGCAACGTGTTCAGCGTAGAAACTGGGTACCGGCTGTCAGACGACCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016897.12 ENSMUST00000109479.8 ENSMUST00000109480.8 ENSMUST00000154401.8 |
||
| CDS TCA 72 bp | AGATGCCTTTTCCCTGTGCTTTGCCACATGGCTTCATaGTCCAGGTGCTGGACGGGCTCTTCCGGAACTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RCLFPVLCHMAS*SRCWTGSSGTL Trigger: AAGAGTTCCGGAAGAGCCCGTCCAGCACCTGGATCATGAAGCCATGTGGCAAAGCACAGGGAAAAGGCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016897.12 ENSMUST00000109479.8 ENSMUST00000109480.8 |
||
| CDS CCA 72 bp | TCCTCCCCATGCTTCTGGATGGCCACGTTGGTAAGGTaGACAAACATGTTGTCGAGCTCACTGGTACTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSPCFWMATLVR*TNMLSSSLVLG Trigger: CCCTAGTACCAGTGAGCTCGACAACATGTTTGTCCACCTTACCAACGTGGCCATCCAGAAGCATGGGGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016897.12 ENSMUST00000109479.8 ENSMUST00000109480.8 |
||
| CDS TCA 72 bp | GTAGTGGTTGGGGAAATGGTTGACGATCTGGTCGTCTaGCAGCCGGTACCCAGTTTCTACGCTGAACACGTT | + |
|
Preference number: 6 (lower is better) Translates to: VVVGEMVDDLVV*QPVPSFYAEHV Trigger: AACGTGTTCAGCGTAGAAACTGGGTACCGGCTGTCAGACGACCAGATCGTCAACCATTTCCCCAACCACTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016897.12 ENSMUST00000109479.8 ENSMUST00000109480.8 ENSMUST00000154401.8 |
||
| CDS CAA 72 bp | GCTTCTTTTGTGGACTGCGACACAAACGAGGACGTCTaGCTGTCCCGGGACCACTTTTTGATCTGCGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: ASFVDCDTNEDV*LSRDHFLICES Trigger: GCTTTCGCAGATCAAAAAGTGGTCCCGGGACAGCAAGACGTCCTCGTTTGTGTCGCAGTCCACAAAAGAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000016897.12 ENSMUST00000109479.8 ENSMUST00000109480.8 |
||
| CDS CAA 72 bp | GTGTCGTTAATCAGGTTGTACTTAAGGATTCGATCGTaGGCGGTGCTGGATGTGAGAGACGGGGACGCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VSLIRLYLRIRS*AVLDVRDGDAL Trigger: CAACGCGTCCCCGTCTCTCACATCCAGCACCGCCAACGATCGAATCCTTAAGTACAACCTGATTAACGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS CAA 90 bp | ATCTGCGAAAGCTTATTGATGAGGAAGATGCCTTTTCCCTGTGCTTaGCCACATGGCTTCATGATCCAGGTGCTGGACGGGCTCTTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: ICESLLMRKMPFPCA*PHGFMIQVLDGLFR Trigger: CCGGAAGAGCCCGTCCAGCACCTGGATCATGAAGCCATGTGGCAAAGCACAGGGAAAAGGCATCTTCCTCATCAATAAGCTTTCGCAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016897.12 ENSMUST00000109479.8 ENSMUST00000109480.8 |
||
| CDS CAA 90 bp | TCCCCATGCTTCTGGATGGCCACGTTGGTAAGGTGGACAAACATGTaGTCGAGCTCACTGGTACTAGGGGTGTACTTCACTGTGCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SPCFWMATLVRWTNM*SSSLVLGVYFTVQK Trigger: CTTCTGCACAGTGAAGTACACCCCTAGTACCAGTGAGCTCGACAACATGTTTGTCCACCTTACCAACGTGGCCATCCAGAAGCATGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016897.12 ENSMUST00000109479.8 ENSMUST00000109480.8 |
||
| CDS CAA 90 bp | ATGTTGAGGGTGTCGTTAATCAGGTTGTACTTAAGGATTCGATCGTaGGCGGTGCTGGATGTGAGAGACGGGGACGCGTTGACCTCGATC | + |
|
Preference number: 6 (lower is better) Translates to: MLRVSLIRLYLRIRS*AVLDVRDGDALTSI Trigger: GATCGAGGTCAACGCGTCCCCGTCTCTCACATCCAGCACCGCCAACGATCGAATCCTTAAGTACAACCTGATTAACGACACCCTCAACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS CAA 90 bp | ATCTCGCCGTTGGGGACCGCAATGTTGAGGGTGTCGTTAATCAGGTaGTACTTAAGGATTCGATCGTTGGCGGTGCTGGATGTGAGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: ISPLGTAMLRVSLIR*YLRIRSLAVLDVRD Trigger: GTCTCTCACATCCAGCACCGCCAACGATCGAATCCTTAAGTACAACCTGATTAACGACACCCTCAACATTGCGGTCCCCAACGGCGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS GCA 72 bp | TCGTTGTTCATCACTGGCGCCACGGCCTTGAGAGACTaGACGATGATCCAGTGGATTTCATCAAACAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SLFITGATALRD*TMIQWISSNSL Trigger: CAAGCTGTTTGATGAAATCCACTGGATCATCGTGCAGTCTCTCAAGGCCGTGGCGCCAGTGATGAACAACGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
||
| CDS CAA 72 bp | CAGTGTTTGTCGTTGTTCATCACTGGCGCCACGGCCTaGAGAGACTGCACGATGATCCAGTGGATTTCATCA | + |
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Preference number: 6 (lower is better) Translates to: QCLSLFITGATA*RDCTMIQWISS Trigger: TGATGAAATCCACTGGATCATCGTGCAGTCTCTCAAGGCCGTGGCGCCAGTGATGAACAACGACAAACACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
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| CDS CAA 90 bp | GACGTCTTGCTGTCCCGGGACCACTTTTTGATCTGCGAAAGCTTATaGATGAGGAAGATGCCTTTTCCCTGTGCTTTGCCACATGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: DVLLSRDHFLICESL*MRKMPFPCALPHGF Trigger: GAAGCCATGTGGCAAAGCACAGGGAAAAGGCATCTTCCTCATCAATAAGCTTTCGCAGATCAAAAAGTGGTCCCGGGACAGCAAGACGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000016897.12 ENSMUST00000109479.8 ENSMUST00000109480.8 |
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| CDS CAA 90 bp | GACTGCGACACAAACGAGGACGTCTTGCTGTCCCGGGACCACTTTTaGATCTGCGAAAGCTTATTGATGAGGAAGATGCCTTTTCCCTGT | + |
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Preference number: 6 (lower is better) Translates to: DCDTNEDVLLSRDHF*ICESLLMRKMPFPC Trigger: ACAGGGAAAAGGCATCTTCCTCATCAATAAGCTTTCGCAGATCAAAAAGTGGTCCCGGGACAGCAAGACGTCCTCGTTTGTGTCGCAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016897.12 ENSMUST00000109479.8 ENSMUST00000109480.8 |
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| CDS CAA 90 bp | TTGTTCCACTTGCAGTCGGGAATCTCGCCGTTGGGGACCGCAATGTaGAGGGTGTCGTTAATCAGGTTGTACTTAAGGATTCGATCGTTG | + |
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Preference number: 6 (lower is better) Translates to: LFHLQSGISPLGTAM*RVSLIRLYLRIRSL Trigger: CAACGATCGAATCCTTAAGTACAACCTGATTAACGACACCCTCAACATTGCGGTCCCCAACGGCGAGATTCCCGACTGCAAGTGGAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
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| CDS CCA 72 bp | CGTCATACAGGATCTCATAGTTGCCAAGTACTTCCTTaGGGGGAGACTTGTTCCACTTGCAGTCGGGAATCT | + |
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Preference number: 6 (lower is better) Translates to: RHTGSHSCQVLP*GETCSTCSRES Trigger: AGATTCCCGACTGCAAGTGGAACAAGTCTCCCCCCAAGGAAGTACTTGGCAACTATGAGATCCTGTATGACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
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| CDS CAA 72 bp | TTCTGGATGGCCACGTTGGTAAGGTGGACAAACATGTaGTCGAGCTCACTGGTACTAGGGGTGTACTTCACT | + |
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Preference number: 6 (lower is better) Translates to: FWMATLVRWTNM*SSSLVLGVYFT Trigger: AGTGAAGTACACCCCTAGTACCAGTGAGCTCGACAACATGTTTGTCCACCTTACCAACGTGGCCATCCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016897.12 ENSMUST00000109479.8 ENSMUST00000109480.8 |
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| CDS CAA 72 bp | TTGGGGACCGCAATGTTGAGGGTGTCGTTAATCAGGTaGTACTTAAGGATTCGATCGTTGGCGGTGCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: LGTAMLRVSLIR*YLRIRSLAVLD Trigger: ATCCAGCACCGCCAACGATCGAATCCTTAAGTACAACCTGATTAACGACACCCTCAACATTGCGGTCCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
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| CDS CAA 72 bp | TTGCAGTCGGGAATCTCGCCGTTGGGGACCGCAATGTaGAGGGTGTCGTTAATCAGGTTGTACTTAAGGATT | + |
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Preference number: 6 (lower is better) Translates to: LQSGISPLGTAM*RVSLIRLYLRI Trigger: AATCCTTAAGTACAACCTGATTAACGACACCCTCAACATTGCGGTCCCCAACGGCGAGATTCCCGACTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016897.12 ENSMUST00000109480.8 |
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| CDS CAA 90 bp | ATCACGTACGCTTCTTTTGTGGACTGCGACACAAACGAGGACGTCTaGCTGTCCCGGGACCACTTTTTGATCTGCGAAAGCTTATTGATG | + |
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Preference number: 6 (lower is better) Translates to: ITYASFVDCDTNEDV*LSRDHFLICESLLM Trigger: CATCAATAAGCTTTCGCAGATCAAAAAGTGGTCCCGGGACAGCAAGACGTCCTCGTTTGTGTCGCAGTCCACAAAAGAAGCGTACGTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000016897.12 ENSMUST00000109479.8 ENSMUST00000109480.8 |
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| CDS CAA 90 bp | CAGTCTTCATTTTCTGTCACTTGGATCCACCCTCTCTTCTCGAAGTaGTTGATTAGTACCGACTTCTCAATGTCAGTGACCCACTTCACC | + |
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Preference number: 6 (lower is better) Translates to: QSSFSVTWIHPLFSK*LISTDFSMSVTHFT Trigger: GGTGAAGTGGGTCACTGACATTGAGAAGTCGGTACTAATCAACAACTTCGAGAAGAGAGGGTGGATCCAAGTGACAGAAAATGAAGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016897.12 ENSMUST00000109479.8 ENSMUST00000109480.8 ENSMUST00000154401.8 |
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| CDS CAA 90 bp | TCTTCATTTTCTGTCACTTGGATCCACCCTCTCTTCTCGAAGTTGTaGATTAGTACCGACTTCTCAATGTCAGTGACCCACTTCACCCTT | + |
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Preference number: 6 (lower is better) Translates to: SSFSVTWIHPLFSKL*ISTDFSMSVTHFTL Trigger: AAGGGTGAAGTGGGTCACTGACATTGAGAAGTCGGTACTAATCAACAACTTCGAGAAGAGAGGGTGGATCCAAGTGACAGAAAATGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016897.12 ENSMUST00000109479.8 ENSMUST00000109480.8 ENSMUST00000154401.8 |
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| CDS CAA 72 bp | GTACCCAGTTTCTACGCTGAACACGTTGCGAATGGTTaGCACGCTCATCCAGTAAAAATTCCAGTCTTCATT | + |
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Preference number: 6 (lower is better) Translates to: VPSFYAEHVANG*HAHPVKIPVFI Trigger: AATGAAGACTGGAATTTTTACTGGATGAGCGTGCAAACCATTCGCAACGTGTTCAGCGTAGAAACTGGGTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000016897.12 ENSMUST00000109479.8 ENSMUST00000109480.8 ENSMUST00000154401.8 |
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