Pregenerated sensors for TTL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027394Ensembl transcript IDs: ENSMUST00000035812.14, ENSMUST00000144120.2
Found 193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCAGACTGGGCCCTTTCTGGAATGGAACCTGGCCCTCCAGCTCCTaGAGAGGCCCTTGGAGCCAAGGAGGCCCCGCATGGGGAGAGCTA | + |
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Preference number: 1 (lower is better) Translates to: CRLGPFWNGTWPSSS*RGPWSQGGPAWGEL Trigger: TAGCTCTCCCCATGCGGGGCCTCCTTGGCTCCAAGGGCCTCTGCAGGAGCTGGAGGGCCAGGTTCCATTCCAGAAAGGGCCCAGTCTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR GCA 90 bp | GTCCCAGCCCTTCAGAGAAGTGCTGGGCTCTCCCTCTCAGTCGCTTaGGCCAGCTTCCCAAGGTCTCCACAGCACTGTGGGCAGCTCAGC | + |
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Preference number: 1 (lower is better) Translates to: VPALQRSAGLSLSVA*ASFPRSPQHCGQLS Trigger: GCTGAGCTGCCCACAGTGCTGTGGAGACCTTGGGAAGCTGGCGCAAGCGACTGAGAGGGAGAGCCCAGCACTTCTCTGAAGGGCTGGGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR GCA 90 bp | GGCCCTGTGGGTCACAGACCATTCCCAGCGCTCCCCGATGTCCTGTaGATGTGTCATCCCACAGAGCTACTGACACACACTGTCAGCTGC | + |
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Preference number: 1 (lower is better) Translates to: GPVGHRPFPALPDVL*MCHPTELLTHTVSC Trigger: GCAGCTGACAGTGTGTGTCAGTAGCTCTGTGGGATGACACATGCACAGGACATCGGGGAGCGCTGGGAATGGTCTGTGACCCACAGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR GCA 90 bp | TGCGCCAGCTTCCCAAGGTCTCCACAGCACTGTGGGCAGCTCAGCTaGTCTTCCACAGCCGCCATCTCTTCACACTCTTCCTGCACATCT | + |
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Preference number: 1 (lower is better) Translates to: CASFPRSPQHCGQLS*SSTAAISSHSSCTS Trigger: AGATGTGCAGGAAGAGTGTGAAGAGATGGCGGCTGTGGAAGAGCAGCTGAGCTGCCCACAGTGCTGTGGAGACCTTGGGAAGCTGGCGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR CCA 90 bp | GCGTCTCTCCTGTCACTTACATGCATATGCAGACTGGGCCCTTTCTaGAATGGAACCTGGCCCTCCAGCTCCTGCAGAGGCCCTTGGAGC | + |
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Preference number: 1 (lower is better) Translates to: ASLLSLTCICRLGPF*NGTWPSSSCRGPWS Trigger: GCTCCAAGGGCCTCTGCAGGAGCTGGAGGGCCAGGTTCCATTCCAGAAAGGGCCCAGTCTGCATATGCATGTAAGTGACAGGAGAGACGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR TCA 90 bp | CAGCGCTCCCCGATGTCCTGTGCATGTGTCATCCCACAGAGCTACTaGCACACACTGTCAGCTGCTGTGCAGGCCAGCTCCATGCTGTTT | + |
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Preference number: 1 (lower is better) Translates to: QRSPMSCACVIPQSY*HTLSAAVQASSMLF Trigger: AAACAGCATGGAGCTGGCCTGCACAGCAGCTGACAGTGTGTGTCAGTAGCTCTGTGGGATGACACATGCACAGGACATCGGGGAGCGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR GCA 90 bp | CACACCCTCACTGAGAGGGCGTCTCTCCTGTCACTTACATGCATATaGAGACTGGGCCCTTTCTGGAATGGAACCTGGCCCTCCAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: HTLTERASLLSLTCI*RLGPFWNGTWPSSS Trigger: GGAGCTGGAGGGCCAGGTTCCATTCCAGAAAGGGCCCAGTCTGCATATGCATGTAAGTGACAGGAGAGACGCCCTCTCAGTGAGGGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR CCA 90 bp | TCTCCTGTCACTTACATGCATATGCAGACTGGGCCCTTTCTGGAATaGAACCTGGCCCTCCAGCTCCTGCAGAGGCCCTTGGAGCCAAGG | + |
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Preference number: 1 (lower is better) Translates to: SPVTYMHMQTGPFLE*NLALQLLQRPLEPR Trigger: CCTTGGCTCCAAGGGCCTCTGCAGGAGCTGGAGGGCCAGGTTCCATTCCAGAAAGGGCCCAGTCTGCATATGCATGTAAGTGACAGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR CCA 90 bp | GGCCAGAAACCGCTCAAAGGATCAGATCACGCCATAACAAATCCCTaGTCCCAGCCCTTCAGAGAAGTGCTGGGCTCTCCCTCTCAGTCG | + |
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Preference number: 1 (lower is better) Translates to: GQKPLKGSDHAITNP*SQPFREVLGSPSQS Trigger: CGACTGAGAGGGAGAGCCCAGCACTTCTCTGAAGGGCTGGGACCAGGGATTTGTTATGGCGTGATCTGATCCTTTGAGCGGTTTCTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR TCA 90 bp | GGTGCAGGCTCTGTGTCCAGGATTGGAGGCACATACATCGGCTACTaGATCCTCAGGACAGCACCCACAACCCACATGCAACCCACTTTG | + |
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Preference number: 1 (lower is better) Translates to: GAGSVSRIGGTYIGY*ILRTAPTTHMQPTL Trigger: CAAAGTGGGTTGCATGTGGGTTGTGGGTGCTGTCCTGAGGATTCAGTAGCCGATGTATGTGCCTCCAATCCTGGACACAGAGCCTGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR TCA 90 bp | GTTGCCTTACACCCTAGCTCAGACTCTACTGTGTGGCCACCTGCCTaGGAAGCCCTTGAACGTCACAGTCTCTCTTACTCACAGGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: VALHPSSDSTVWPPA*EALERHSLSYSQAS Trigger: GCTGGCCTGTGAGTAAGAGAGACTGTGACGTTCAAGGGCTTCTCAGGCAGGTGGCCACACAGTAGAGTCTGAGCTAGGGTGTAAGGCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144120.2 |
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| 3UTR GCA 90 bp | CTGTGCATGTGTCATCCCACAGAGCTACTGACACACACTGTCAGCTaGTGTGCAGGCCAGCTCCATGCTGTTTCACAACACAGAGGCACT | + |
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Preference number: 1 (lower is better) Translates to: LCMCHPTELLTHTVS*CAGQLHAVSQHRGT Trigger: AGTGCCTCTGTGTTGTGAAACAGCATGGAGCTGGCCTGCACAGCAGCTGACAGTGTGTGTCAGTAGCTCTGTGGGATGACACATGCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR GCA 90 bp | CAACCCACTTTGGCACCTTGTCATTTTGTTCATGGGTCCCCTCCCTaGCACACTGGTACTAGGACTGAGTTCACCCAAGAACACAACCAC | + |
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Preference number: 1 (lower is better) Translates to: QPTLAPCHFVHGSPP*HTGTRTEFTQEHNH Trigger: GTGGTTGTGTTCTTGGGTGAACTCAGTCCTAGTACCAGTGTGGCAGGGAGGGGACCCATGAACAAAATGACAAGGTGCCAAAGTGGGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR GCA 90 bp | CATACATCGGCTACTGAATCCTCAGGACAGCACCCACAACCCACATaGAACCCACTTTGGCACCTTGTCATTTTGTTCATGGGTCCCCTC | + |
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Preference number: 1 (lower is better) Translates to: HTSATESSGQHPQPT*NPLWHLVILFMGPL Trigger: GAGGGGACCCATGAACAAAATGACAAGGTGCCAAAGTGGGTTGCATGTGGGTTGTGGGTGCTGTCCTGAGGATTCAGTAGCCGATGTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR CCA 90 bp | TTATTTCAGAAATGCCCTCTTCGGTGCAGGCTCTGTGTCCAGGATTaGAGGCACATACATCGGCTACTGAATCCTCAGGACAGCACCCAC | + |
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Preference number: 1 (lower is better) Translates to: LFQKCPLRCRLCVQD*RHIHRLLNPQDSTH Trigger: GTGGGTGCTGTCCTGAGGATTCAGTAGCCGATGTATGTGCCTCCAATCCTGGACACAGAGCCTGCACCGAAGAGGGCATTTCTGAAATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR GCA 90 bp | CATGTGTCATCCCACAGAGCTACTGACACACACTGTCAGCTGCTGTaGAGGCCAGCTCCATGCTGTTTCACAACACAGAGGCACTTATAT | + |
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Preference number: 1 (lower is better) Translates to: HVSSHRATDTHCQLL*RPAPCCFTTQRHLY Trigger: ATATAAGTGCCTCTGTGTTGTGAAACAGCATGGAGCTGGCCTGCACAGCAGCTGACAGTGTGTGTCAGTAGCTCTGTGGGATGACACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR GCA 90 bp | TCCCCTCACTGTGACAACGTTTTCCTGACAGCAACCAAAGGTCCATaGTTGAACCTGTCAGATTACCCAAGGTGTACACCCAACTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: SPHCDNVFLTATKGP*LNLSDYPRCTPNFW Trigger: CCAGAAGTTGGGTGTACACCTTGGGTAATCTGACAGGTTCAAGCATGGACCTTTGGTTGCTGTCAGGAAAACGTTGTCACAGTGAGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144120.2 |
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| 3UTR GCA 90 bp | AGAGCTACTGACACACACTGTCAGCTGCTGTGCAGGCCAGCTCCATaGTGTTTCACAACACAGAGGCACTTATATATTCTTGGCAAAATG | + |
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Preference number: 1 (lower is better) Translates to: RATDTHCQLLCRPAP*CFTTQRHLYILGKM Trigger: CATTTTGCCAAGAATATATAAGTGCCTCTGTGTTGTGAAACAGCATGGAGCTGGCCTGCACAGCAGCTGACAGTGTGTGTCAGTAGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR TCA 90 bp | TCAAACATCTTGGGCACAGGCTTACTGTATAATCCAGTATGGCCTTaGACCCACAGTGATCCTCCTGTCTCAGCCTCTCTAGTACTAAGA | + |
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Preference number: 1 (lower is better) Translates to: SNILGTGLLYNPVWP*THSDPPVSASLVLR Trigger: TCTTAGTACTAGAGAGGCTGAGACAGGAGGATCACTGTGGGTTCAAGGCCATACTGGATTATACAGTAAGCCTGTGCCCAAGATGTTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144120.2 |
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| 3UTR GCA 90 bp | AAAACATTCAATATAGTTGCCTTATTTCAGAAATGCCCTCTTCGGTaGAGGCTCTGTGTCCAGGATTGGAGGCACATACATCGGCTACTG | + |
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Preference number: 1 (lower is better) Translates to: KTFNIVALFQKCPLR*RLCVQDWRHIHRLL Trigger: CAGTAGCCGATGTATGTGCCTCCAATCCTGGACACAGAGCCTGCACCGAAGAGGGCATTTCTGAAATAAGGCAACTATATTGAATGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR TCA 90 bp | ACTAAGATTACAGGTCTAACCTACTATACCCAGCTTAGTTTTAATTaGAACCCTGGTAGCACAGAACCACAGGGAAATGGCTCAGCTAAG | + |
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Preference number: 1 (lower is better) Translates to: TKITGLTYYTQLSFN*NPGSTEPQGNGSAK Trigger: CTTAGCTGAGCCATTTCCCTGTGGTTCTGTGCTACCAGGGTTTCAATTAAAACTAAGCTGGGTATAGTAGGTTAGACCTGTAATCTTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144120.2 |
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| 3UTR CAA 90 bp | GGTCCCAGCCCTTCAGAGAAGTGCTGGGCTCTCCCTCTCAGTCGCTaGCGCCAGCTTCCCAAGGTCTCCACAGCACTGTGGGCAGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: GPSPSEKCWALPLSR*RQLPKVSTALWAAQ Trigger: CTGAGCTGCCCACAGTGCTGTGGAGACCTTGGGAAGCTGGCGCAAGCGACTGAGAGGGAGAGCCCAGCACTTCTCTGAAGGGCTGGGACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR-3UTR TCA 90 bp | GCGCTCCCCGATGTCCTGTGCATGTGTCATCCCACAGAGCTACTGACACACACTGCAAGAGGCCTTCACTaGCAGGCCAGGGCACAGCCC | + |
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Preference number: 2 (lower is better) Translates to: ALPDVLCMCHPTELLTHTARGLH*QARAQP Trigger: GGGCTGTGCCCTGGCCTGTCAGTGAAGGCCTCTTGC...AGTGTGTGTCAGTAGCTCTGTGGGATGACACATGCACAGGACATCGGGGAGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR-3UTR TCA 90 bp | ACTCAGGCAGGCACACCCTCACTGAGAGGGCGTCTCTCCTGTCACTTACATGCAAGCCCACCGGGATGGTaGCAAGCAAGAGGCCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: TQAGTPSLRGRLSCHLHASPPGW*QARGLH Trigger: GTGAAGGCCTCTTGCTTGTCACCATCCCGGTGGGCT...TGCATGTAAGTGACAGGAGAGACGCCCTCTCAGTGAGGGTGTGCCTGCCTGAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR-3UTR CCA 90 bp | ACTCAGGCAGGCACACCCTCACTGAGAGGGCGTCTCTCCTGTCACTTACATGCACCTTCAGAGAAGTGCTaGGCTCTCCCTCTCAGTCGC | + |
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Preference number: 2 (lower is better) Translates to: TQAGTPSLRGRLSCHLHAPSEKC*ALPLSR Trigger: GCGACTGAGAGGGAGAGCCCAGCACTTCTCTGAAGG...TGCATGTAAGTGACAGGAGAGACGCCCTCTCAGTGAGGGTGTGCCTGCCTGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR-3UTR TCA 90 bp | GCGCTCCCCGATGTCCTGTGCATGTGTCATCCCACAGAGCTACTGACACACACTGCATGGGGAGAGCTATaGGGTGAGGAGTGTGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: ALPDVLCMCHPTELLTHTAWGEL*GEECEE Trigger: TTCCTCACACTCCTCACCTCATAGCTCTCCCCATGC...AGTGTGTGTCAGTAGCTCTGTGGGATGACACATGCACAGGACATCGGGGAGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR-3UTR TCA 90 bp | TCGGTGCAGGCTCTGTGTCCAGGATTGGAGGCACATACATCGGCTACTGAATCCACTGACCATGAAGAGTaGCTGGGAGGCCAGGCATGG | + |
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Preference number: 2 (lower is better) Translates to: SVQALCPGLEAHTSATESTDHEE*LGGQAW Trigger: CCATGCCTGGCCTCCCAGTCACTCTTCATGGTCAGT...GGATTCAGTAGCCGATGTATGTGCCTCCAATCCTGGACACAGAGCCTGCACCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR-3UTR TCA 90 bp | TTGGCACCTTGTCATTTTGTTCATGGGTCCCCTCCCTGCCACACTGGTACTAGGCCAGTCTGTGTCCAGTaGGGCTGCACCATGCACAGA | + |
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Preference number: 2 (lower is better) Translates to: LAPCHFVHGSPPCHTGTRPVCVQ*GCTMHR Trigger: TCTGTGCATGGTGCAGCCTCACTGGACACAGACTGG...CCTAGTACCAGTGTGGCAGGGAGGGGACCCATGAACAAAATGACAAGGTGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR-3UTR GCA 90 bp | ACTGGGCCCTTTCTGGAATGGAACCTGGCCCTCCAGCTCCTGCAGAGGCCCTTGTGGCAACCTCTAAAATaGTCTAAGGTCCAGTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: TGPFLEWNLALQLLQRPLWQPLK*SKVQSV Trigger: CACAGACTGGACCTTAGAGCATTTTAGAGGTTGCCA...CAAGGGCCTCTGCAGGAGCTGGAGGGCCAGGTTCCATTCCAGAAAGGGCCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR-3UTR GCA 90 bp | TCCCACAGAGCTACTGACACACACTGTCAGCTGCTGTGCAGGCCAGCTCCATGCGTAAATACTGTCACATaGTGCCACCCACTGGTGCAC | + |
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Preference number: 2 (lower is better) Translates to: SHRATDTHCQLLCRPAPCVNTVT*CHPLVH Trigger: GTGCACCAGTGGGTGGCAGCATGTGACAGTATTTAC...GCATGGAGCTGGCCTGCACAGCAGCTGACAGTGTGTGTCAGTAGCTCTGTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR-3UTR CCA 90 bp | TTACACCAACTGACCATGAAGAGTGACTGGGAGGCCAGGCATGGCCATCTGTGCGAACACACTGTGCTCTaGGGAGAAGGGCAGATTCGC | + |
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Preference number: 2 (lower is better) Translates to: LHQLTMKSDWEARHGHLCEHTVL*GEGQIR Trigger: GCGAATCTGCCCTTCTCCCCAGAGCACAGTGTGTTC...GCACAGATGGCCATGCCTGGCCTCCCAGTCACTCTTCATGGTCAGTTGGTGTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR CAA 90 bp | CAGCACCCACAACCCACATGCAACCCACTTTGGCACCTTGTCATTTaGTTCATGGGTCCCCTCCCTGCCACACTGGTACTAGGACTGAGT | + |
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Preference number: 2 (lower is better) Translates to: QHPQPTCNPLWHLVI*FMGPLPATLVLGLS Trigger: ACTCAGTCCTAGTACCAGTGTGGCAGGGAGGGGACCCATGAACAAAATGACAAGGTGCCAAAGTGGGTTGCATGTGGGTTGTGGGTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR-3UTR GCA 90 bp | ACTGGGCCCTTTCTGGAATGGAACCTGGCCCTCCAGCTCCTGCAGAGGCCCTTGACTCCCAGAAAGGATTaGTACAAAGGTTCAAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: TGPFLEWNLALQLLQRPLTPRKD*YKGSKV Trigger: CACCTTTGAACCTTTGTAGCAATCCTTTCTGGGAGT...CAAGGGCCTCTGCAGGAGCTGGAGGGCCAGGTTCCATTCCAGAAAGGGCCCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR-3UTR CCA 90 bp | CTTTGGCACCTTGTCATTTTGTTCATGGGTCCCCTCCCTGCCACACTGGTACTAACAAAGGTTCAAAGGTaGGGGGAGGGGGTTGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: LWHLVILFMGPLPATLVLTKVQR*GEGVVG Trigger: CCCCACAACCCCCTCCCCCCACCTTTGAACCTTTGT...TAGTACCAGTGTGGCAGGGAGGGGACCCATGAACAAAATGACAAGGTGCCAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR-3UTR TCA 90 bp | TCCCACAGAGCTACTGACACACACTGTCAGCTGCTGTGCAGGCCAGCTCCATGCGGACGAGAAGCAAACTaGGACACTGCTTGGATAATA | + |
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Preference number: 2 (lower is better) Translates to: SHRATDTHCQLLCRPAPCGREAN*DTAWII Trigger: TATTATCCAAGCAGTGTCTCAGTTTGCTTCTCGTCC...GCATGGAGCTGGCCTGCACAGCAGCTGACAGTGTGTGTCAGTAGCTCTGTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR-3UTR CCA 90 bp | CTTTGGCACCTTGTCATTTTGTTCATGGGTCCCCTCCCTGCCACACTGGTACTAGTACATTTCCCAAGGTaGCTCTGTGCCTTCCGGTGC | + |
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Preference number: 2 (lower is better) Translates to: LWHLVILFMGPLPATLVLVHFPR*LCAFRC Trigger: GCACCGGAAGGCACAGAGCCACCTTGGGAAATGTAC...TAGTACCAGTGTGGCAGGGAGGGGACCCATGAACAAAATGACAAGGTGCCAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR-3UTR CCA 90 bp | TTACACCAACTGACCATGAAGAGTGACTGGGAGGCCAGGCATGGCCATCTGTGCGCCATAACAAATCCCTaGTCCCAGCCCTTCAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: LHQLTMKSDWEARHGHLCAITNP*SQPFRE Trigger: TTCTCTGAAGGGCTGGGACCAGGGATTTGTTATGGC...GCACAGATGGCCATGCCTGGCCTCCCAGTCACTCTTCATGGTCAGTTGGTGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR-3UTR CCA 90 bp | CTTTGGCACCTTGTCATTTTGTTCATGGGTCCCCTCCCTGCCACACTGGTACTATTCTGGAATGGAACCTaGCCCTCCAGCTCCTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: LWHLVILFMGPLPATLVLFWNGT*PSSSCR Trigger: TCTGCAGGAGCTGGAGGGCCAGGTTCCATTCCAGAA...TAGTACCAGTGTGGCAGGGAGGGGACCCATGAACAAAATGACAAGGTGCCAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR-3UTR CCA 90 bp | GCGCTCCCCGATGTCCTGTGCATGTGTCATCCCACAGAGCTACTGACACACACTCTAATGACAGTGCCATaGGTGGAATTGGCATCTCCA | + |
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Preference number: 2 (lower is better) Translates to: ALPDVLCMCHPTELLTHTLMTVP*VELASP Trigger: TGGAGATGCCAATTCCACCCATGGCACTGTCATTAG...AGTGTGTGTCAGTAGCTCTGTGGGATGACACATGCACAGGACATCGGGGAGCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR CAA 90 bp | CTTATTTCAGAAATGCCCTCTTCGGTGCAGGCTCTGTGTCCAGGATaGGAGGCACATACATCGGCTACTGAATCCTCAGGACAGCACCCA | + |
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Preference number: 2 (lower is better) Translates to: LISEMPSSVQALCPG*EAHTSATESSGQHP Trigger: TGGGTGCTGTCCTGAGGATTCAGTAGCCGATGTATGTGCCTCCAATCCTGGACACAGAGCCTGCACCGAAGAGGGCATTTCTGAAATAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR-3UTR TCA 90 bp | CTTTGGCACCTTGTCATTTTGTTCATGGGTCCCCTCCCTGCCACACTGGTACTACCCTCCCTTTCTAAGTaGGTGTGCACACTGCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: LWHLVILFMGPLPATLVLPSLSK*VCTLPS Trigger: AGAAGGCAGTGTGCACACTCACTTAGAAAGGGAGGG...TAGTACCAGTGTGGCAGGGAGGGGACCCATGAACAAAATGACAAGGTGCCAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR-3UTR GCA 90 bp | TTGGCACCTTGTCATTTTGTTCATGGGTCCCCTCCCTGCCACACTGGTACTAGGTCTTCACACTCTTCCTaGACATCTGTCCCCCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: LAPCHFVHGSPPCHTGTRSSHSS*TSVPQH Trigger: ATGCTGGGGGACAGATGTGCAGGAAGAGTGTGAAGA...CCTAGTACCAGTGTGGCAGGGAGGGGACCCATGAACAAAATGACAAGGTGCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR-3UTR GCA 90 bp | TCGGTGCAGGCTCTGTGTCCAGGATTGGAGGCACATACATCGGCTACTGAATCCAATACTGTCACATGCTaGCACCCACTGGTGCACATT | + |
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Preference number: 2 (lower is better) Translates to: SVQALCPGLEAHTSATESNTVTC*HPLVHI Trigger: AATGTGCACCAGTGGGTGGCAGCATGTGACAGTATT...GGATTCAGTAGCCGATGTATGTGCCTCCAATCCTGGACACAGAGCCTGCACCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR-3UTR CCA 90 bp | TCACTTACATGCATATGCAGACTGGGCCCTTTCTGGAATGGAACCTGGCCCTCCTCTCTCTCTTTCCTCTaGAGCAGGACCCCGTACATT | + |
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Preference number: 2 (lower is better) Translates to: SLTCICRLGPFWNGTWPSSLSFL*SRTPYI Trigger: AATGTACGGGGTCCTGCTCCAGAGGAAAGAGAGAGA...GGAGGGCCAGGTTCCATTCCAGAAAGGGCCCAGTCTGCATATGCATGTAAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR CAA 90 bp | GTAAATACTGTCACATGCTGCCACCCACTGGTGCACATTCTAAAATaGTCTCATCTTTCCTTTCCTCGCCGCAAGCGCCCACACCTCACC | + |
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Preference number: 2 (lower is better) Translates to: VNTVTCCHPLVHILK*SHLSFPRRKRPHLT Trigger: GGTGAGGTGTGGGCGCTTGCGGCGAGGAAAGGAAAGATGAGACAATTTTAGAATGTGCACCAGTGGGTGGCAGCATGTGACAGTATTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR-3UTR GCA 90 bp | CTTTGGCACCTTGTCATTTTGTTCATGGGTCCCCTCCCTGCCACACTGGTACTATGCTTATTTGATGCTTaGAGATTCGTCAGGCCTGCG | + |
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Preference number: 2 (lower is better) Translates to: LWHLVILFMGPLPATLVLCLFDA*RFVRPA Trigger: CGCAGGCCTGACGAATCTGCAAGCATCAAATAAGCA...TAGTACCAGTGTGGCAGGGAGGGGACCCATGAACAAAATGACAAGGTGCCAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
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| 3UTR-3UTR GCA 90 bp | TCTCATGGTACACTTTTGTGGACACTTAAAAGAAGCAGTGCAGAGCTCCAAAAATGGCCCTCCAGCTCCTaGAGAGGCCCTTGGAGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: SHGTLLWTLKRSSAELQKWPSSS*RGPWSQ Trigger: TTGGCTCCAAGGGCCTCTGCAGGAGCTGGAGGGCCA...TTTTTGGAGCTCTGCACTGCTTCTTTTAAGTGTCCACAAAAGTGTACCATGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR-3UTR CCA 90 bp | AGCCGATCTTCCTACTTGGTGGGAAGGAAATGCATAAAAATGGTTGAAGCTATGGGGCCCTTTCTGGAATaGAACCTGGCCCTCCAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: SRSSYLVGRKCIKMVEAMGPFLE*NLALQL Trigger: GAGCTGGAGGGCCAGGTTCCATTCCAGAAAGGGCCC...CATAGCTTCAACCATTTTTATGCATTTCCTTCCCACCAAGTAGGAAGATCGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR-3UTR CCA 90 bp | CTTTGGCACCTTGTCATTTTGTTCATGGGTCCCCTCCCTGCCACACTGGTACTATCTTTCCCAAAGCAATaGTTCAAGGCACCTCAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: LWHLVILFMGPLPATLVLSFPKQ*FKAPQG Trigger: GCCTTGAGGTGCCTTGAACCATTGCTTTGGGAAAGA...TAGTACCAGTGTGGCAGGGAGGGGACCCATGAACAAAATGACAAGGTGCCAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR-3UTR CCA 90 bp | AGCCGATCTTCCTACTTGGTGGGAAGGAAATGCATAAAAATGGTTGAAGCTATGGTCTCCACAGCACTGTaGGCAGCTCAGCTGCTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: SRSSYLVGRKCIKMVEAMVSTAL*AAQLLF Trigger: GAAGAGCAGCTGAGCTGCCCACAGTGCTGTGGAGAC...CATAGCTTCAACCATTTTTATGCATTTCCTTCCCACCAAGTAGGAAGATCGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR-3UTR CCA 90 bp | TTAAGTGATTCTTCCAAGATAATAATGTGTTGCCCTCTTTCCCAAAGCAATGGTTCCTGCAGAGGCCCTTaGAGCCAAGGAGGCCCCGCA | + |
|
Preference number: 2 (lower is better) Translates to: LSDSSKIIMCCPLSQSNGSCRGP*SQGGPA Trigger: TGCGGGGCCTCCTTGGCTCCAAGGGCCTCTGCAGGA...ACCATTGCTTTGGGAAAGAGGGCAACACATTATTATCTTGGAAGAATCACTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR CAA 90 bp | TCTCATGCTTATTTGATGCTTGCAGATTCGTCAGGCCTGCGGCTTTaGTTTCTAAAACATGCAGTGAGCAGCATACACTGGCGTCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: SHAYLMLADSSGLRL*FLKHAVSSIHWRPQ Trigger: CTGTGGACGCCAGTGTATGCTGCTCACTGCATGTTTTAGAAACAAAAGCCGCAGGCCTGACGAATCTGCAAGCATCAAATAAGCATGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR-3UTR GCA 90 bp | AGCCGATCTTCCTACTTGGTGGGAAGGAAATGCATAAAAATGGTTGAAGCTATGAGCCCTTCAGAGAAGTaGTGGGCTCTCCCTCTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: SRSSYLVGRKCIKMVEAMSPSEK*WALPLS Trigger: ACTGAGAGGGAGAGCCCAGCACTTCTCTGAAGGGCT...CATAGCTTCAACCATTTTTATGCATTTCCTTCCCACCAAGTAGGAAGATCGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR-3UTR GCA 90 bp | CAGGATTGGAGGCACATACATCGGCTACTGAATCCTCAGGACAGCACCCACAACAAGATAATAATGTGTTaGCCTCTTTCCCAAAGCAAT | + |
|
Preference number: 2 (lower is better) Translates to: QDWRHIHRLLNPQDSTHNKIIMC*PLSQSN Trigger: ATTGCTTTGGGAAAGAGGGCAACACATTATTATCTT...GTTGTGGGTGCTGTCCTGAGGATTCAGTAGCCGATGTATGTGCCTCCAATCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR-3UTR TCA 90 bp | AGCCGATCTTCCTACTTGGTGGGAAGGAAATGCATAAAAATGGTTGAAGCTATGGGATTCTACCTTCTCTaGCTCCCAGAAAGGATTGCT | + |
|
Preference number: 2 (lower is better) Translates to: SRSSYLVGRKCIKMVEAMGFYLL*LPERIA Trigger: AGCAATCCTTTCTGGGAGTCAGAGAAGGTAGAATCC...CATAGCTTCAACCATTTTTATGCATTTCCTTCCCACCAAGTAGGAAGATCGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR-3UTR CCA 90 bp | TTAAGTGATTCTTCCAAGATAATAATGTGTTGCCCTCTTTCCCAAAGCAATGGTTCGCTTCGTCTGCCGTaGTTCCAGGACACTCTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: LSDSSKIIMCCPLSQSNGSLRLP*FQDTLQ Trigger: CTGAAGAGTGTCCTGGAACCACGGCAGACGAAGCGA...ACCATTGCTTTGGGAAAGAGGGCAACACATTATTATCTTGGAAGAATCACTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR-3UTR TCA 90 bp | TTAAGTGATTCTTCCAAGATAATAATGTGTTGCCCTCTTTCCCAAAGCAATGGTGGTACCAAAGGCCCCTaGGTCTTCCACTTACTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: LSDSSKIIMCCPLSQSNGGTKGP*VFHLLS Trigger: AGAGAGTAAGTGGAAGACTCAGGGGCCTTTGGTACC...ACCATTGCTTTGGGAAAGAGGGCAACACATTATTATCTTGGAAGAATCACTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR-3UTR CCA 90 bp | TTAAGTGATTCTTCCAAGATAATAATGTGTTGCCCTCTTTCCCAAAGCAATGGTTCAATTAGCCACAGGTaGGAAGGGTTAGCCACTTAC | + |
|
Preference number: 2 (lower is better) Translates to: LSDSSKIIMCCPLSQSNGSISHR*EGLATY Trigger: GTAAGTGGCTAACCCTTCCCACCTGTGGCTAATTGA...ACCATTGCTTTGGGAAAGAGGGCAACACATTATTATCTTGGAAGAATCACTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR-3UTR GCA 90 bp | AGCCGATCTTCCTACTTGGTGGGAAGGAAATGCATAAAAATGGTTGAAGCTATGAGATTTACTGACATCTaGTTTTCCAGCTCCATAACA | + |
|
Preference number: 2 (lower is better) Translates to: SRSSYLVGRKCIKMVEAMRFTDI*FSSSIT Trigger: TGTTATGGAGCTGGAAAAGCAGATGTCAGTAAATCT...CATAGCTTCAACCATTTTTATGCATTTCCTTCCCACCAAGTAGGAAGATCGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR-3UTR CCA 90 bp | TTAAGTGATTCTTCCAAGATAATAATGTGTTGCCCTCTTTCCCAAAGCAATGGTTCAGCAGGTCTTCTGTaGACATTTCACTCGACTGTA | + |
|
Preference number: 2 (lower is better) Translates to: LSDSSKIIMCCPLSQSNGSAGLL*TFHSTV Trigger: TACAGTCGAGTGAAATGTCCACAGAAGACCTGCTGA...ACCATTGCTTTGGGAAAGAGGGCAACACATTATTATCTTGGAAGAATCACTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR-3UTR TCA 90 bp | TTCACAACACAGAGGCACTTATATATTCTTGGCAAAATGGACTTTATAATTGCCAGGCATACTGTTACCTaGGGTTCTGATTCAATTAGC | + |
|
Preference number: 2 (lower is better) Translates to: FTTQRHLYILGKMDFIIARHTVT*GSDSIS Trigger: GCTAATTGAATCAGAACCTCAGGTAACAGTATGCCT...GGCAATTATAAAGTCCATTTTGCCAAGAATATATAAGTGCCTCTGTGTTGTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR-3UTR GCA 90 bp | TTAAGTGATTCTTCCAAGATAATAATGTGTTGCCCTCTTTCCCAAAGCAATGGTTTGGTGGGAAGGAAATaGATAAAAATGGTTGAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: LSDSSKIIMCCPLSQSNGLVGRK*IKMVEA Trigger: AGCTTCAACCATTTTTATGCATTTCCTTCCCACCAA...ACCATTGCTTTGGGAAAGAGGGCAACACATTATTATCTTGGAAGAATCACTTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR-3UTR CCA 90 bp | TTAAGTGATTCTTCCAAGATAATAATGTGTTGCCCTCTTTCCCAAAGCAATGGTCATGGTACACTTTTGTaGACACTTAAAAGAAGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: LSDSSKIIMCCPLSQSNGHGTLL*TLKRSS Trigger: ACTGCTTCTTTTAAGTGTCCACAAAAGTGTACCATG...ACCATTGCTTTGGGAAAGAGGGCAACACATTATTATCTTGGAAGAATCACTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR-3UTR CCA 90 bp | TTAAGTGATTCTTCCAAGATAATAATGTGTTGCCCTCTTTCCCAAAGCAATGGTTCTATAAAATATGAATaGACCCATGACCCAGAAACA | + |
|
Preference number: 2 (lower is better) Translates to: LSDSSKIIMCCPLSQSNGSIKYE*THDPET Trigger: TGTTTCTGGGTCATGGGTCCATTCATATTTTATAGA...ACCATTGCTTTGGGAAAGAGGGCAACACATTATTATCTTGGAAGAATCACTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR GCA 72 bp | GGCCCTTTCTGGAATGGAACCTGGCCCTCCAGCTCCTaGAGAGGCCCTTGGAGCCAAGGAGGCCCCGCATGG | + |
|
Preference number: 3 (lower is better) Translates to: GPFWNGTWPSSS*RGPWSQGGPAW Trigger: CCATGCGGGGCCTCCTTGGCTCCAAGGGCCTCTGCAGGAGCTGGAGGGCCAGGTTCCATTCCAGAAAGGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR CCA 72 bp | GACAGGCCAGGGCACAGCCCGGACTGTGATGCATGCTaGTCCAGAGTTCAGCGGGACATAGTGTCGCAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: DRPGHSPDCDAC*SRVQRDIVSQG Trigger: TCCCTGCGACACTATGTCCCGCTGAACTCTGGACCAGCATGCATCACAGTCCGGGCTGTGCCCTGGCCTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR GCA 72 bp | CTTCAGAGAAGTGCTGGGCTCTCCCTCTCAGTCGCTTaGGCCAGCTTCCCAAGGTCTCCACAGCACTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LQRSAGLSLSVA*ASFPRSPQHCG Trigger: CCCACAGTGCTGTGGAGACCTTGGGAAGCTGGCGCAAGCGACTGAGAGGGAGAGCCCAGCACTTCTCTGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR GCA 72 bp | ACTGACAGGCCAGGGCACAGCCCGGACTGTGATGCATaGTGGTCCAGAGTTCAGCGGGACATAGTGTCGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TDRPGHSPDCDA*WSRVQRDIVSQ Trigger: CTGCGACACTATGTCCCGCTGAACTCTGGACCAGCATGCATCACAGTCCGGGCTGTGCCCTGGCCTGTCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR-3UTR CAA 90 bp | GCGCTCCCCGATGTCCTGTGCATGTGTCATCCCACAGAGCTACTGACACACACTGTAACCCTGGCACCTTaGCCCTCTAACTCCAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: ALPDVLCMCHPTELLTHTVTLAP*PSNSRL Trigger: GAGCCTGGAGTTAGAGGGCAAAGGTGCCAGGGTTAC...AGTGTGTGTCAGTAGCTCTGTGGGATGACACATGCACAGGACATCGGGGAGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR TCA 72 bp | CCGATGTCCTGTGCATGTGTCATCCCACAGAGCTACTaGCACACACTGTCAGCTGCTGTGCAGGCCAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: PMSCACVIPQSY*HTLSAAVQASS Trigger: GGAGCTGGCCTGCACAGCAGCTGACAGTGTGTGTCAGTAGCTCTGTGGGATGACACATGCACAGGACATCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR GCA 72 bp | TTCCCAAGGTCTCCACAGCACTGTGGGCAGCTCAGCTaGTCTTCCACAGCCGCCATCTCTTCACACTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: FPRSPQHCGQLS*SSTAAISSHSS Trigger: GGAAGAGTGTGAAGAGATGGCGGCTGTGGAAGAGCAGCTGAGCTGCCCACAGTGCTGTGGAGACCTTGGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR TCA 72 bp | CAGCTAAGCCCCTCCCACCAGGCAGGGCTGCCATGTTaGTCATGTCTACTAAAGGACTCCCCTCACTGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: QLSPSHQAGLPC*SCLLKDSPHCD Trigger: GTCACAGTGAGGGGAGTCCTTTAGTAGACATGATCAACATGGCAGCCCTGCCTGGTGGGAGGGGCTTAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144120.2 |
||
| 3UTR GCA 72 bp | GGTCACAGACCATTCCCAGCGCTCCCCGATGTCCTGTaGATGTGTCATCCCACAGAGCTACTGACACACACT | + |
|
Preference number: 3 (lower is better) Translates to: GHRPFPALPDVL*MCHPTELLTHT Trigger: AGTGTGTGTCAGTAGCTCTGTGGGATGACACATGCACAGGACATCGGGGAGCGCTGGGAATGGTCTGTGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR CCA 72 bp | CCGCTCAAAGGATCAGATCACGCCATAACAAATCCCTaGTCCCAGCCCTTCAGAGAAGTGCTGGGCTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: PLKGSDHAITNP*SQPFREVLGSP Trigger: GGGAGAGCCCAGCACTTCTCTGAAGGGCTGGGACCAGGGATTTGTTATGGCGTGATCTGATCCTTTGAGCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR CCA 72 bp | ACTTACATGCATATGCAGACTGGGCCCTTTCTGGAATaGAACCTGGCCCTCCAGCTCCTGCAGAGGCCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: TYMHMQTGPFLE*NLALQLLQRPL Trigger: CAAGGGCCTCTGCAGGAGCTGGAGGGCCAGGTTCCATTCCAGAAAGGGCCCAGTCTGCATATGCATGTAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR GCA 72 bp | ACTGAGAGGGCGTCTCTCCTGTCACTTACATGCATATaGAGACTGGGCCCTTTCTGGAATGGAACCTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: TERASLLSLTCI*RLGPFWNGTWP Trigger: GGGCCAGGTTCCATTCCAGAAAGGGCCCAGTCTGCATATGCATGTAAGTGACAGGAGAGACGCCCTCTCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR TCA 72 bp | CACACTCTTCCTGCACATCTGTCCCCCAGCATGCCTTaGCAAGGAGCAGTCCAGTTCTCTCTCTTTCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: HTLPAHLSPSMP*QGAVQFSLFPL Trigger: CAGAGGAAAGAGAGAGAACTGGACTGCTCCTTGTCAAGGCATGCTGGGGGACAGATGTGCAGGAAGAGTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR TCA 72 bp | CACCCTAGCTCAGACTCTACTGTGTGGCCACCTGCCTaGGAAGCCCTTGAACGTCACAGTCTCTCTTACTCA | + |
|
Preference number: 3 (lower is better) Translates to: HPSSDSTVWPPA*EALERHSLSYS Trigger: TGAGTAAGAGAGACTGTGACGTTCAAGGGCTTCTCAGGCAGGTGGCCACACAGTAGAGTCTGAGCTAGGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144120.2 |
||
| 3UTR GCA 72 bp | ACCCTCACTGAGAGGGCGTCTCTCCTGTCACTTACATaGATATGCAGACTGGGCCCTTTCTGGAATGGAACC | + |
|
Preference number: 3 (lower is better) Translates to: TLTERASLLSLT*ICRLGPFWNGT Trigger: GGTTCCATTCCAGAAAGGGCCCAGTCTGCATATGCATGTAAGTGACAGGAGAGACGCCCTCTCAGTGAGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR CCA 72 bp | AAATGCCCTCTTCGGTGCAGGCTCTGTGTCCAGGATTaGAGGCACATACATCGGCTACTGAATCCTCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: KCPLRCRLCVQD*RHIHRLLNPQD Trigger: GTCCTGAGGATTCAGTAGCCGATGTATGTGCCTCCAATCCTGGACACAGAGCCTGCACCGAAGAGGGCATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR-3UTR CAA 90 bp | GCGCTCCCCGATGTCCTGTGCATGTGTCATCCCACAGAGCTACTGACACACACTTCAGGCCTGCGGCTTTaGTTTCTAAAACATGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: ALPDVLCMCHPTELLTHTSGLRL*FLKHAV Trigger: CACTGCATGTTTTAGAAACAAAAGCCGCAGGCCTGA...AGTGTGTGTCAGTAGCTCTGTGGGATGACACATGCACAGGACATCGGGGAGCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR-3UTR CAA 90 bp | TCGGTGCAGGCTCTGTGTCCAGGATTGGAGGCACATACATCGGCTACTGAATCCTGTTTAACTTTGCTCTaGGTGCCGCCTCTGTTACCC | + |
|
Preference number: 3 (lower is better) Translates to: SVQALCPGLEAHTSATESCLTLL*VPPLLP Trigger: GGGTAACAGAGGCGGCACCAAGAGCAAAGTTAAACA...GGATTCAGTAGCCGATGTATGTGCCTCCAATCCTGGACACAGAGCCTGCACCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR GCA 72 bp | CTCTTCACACTCTTCCTGCACATCTGTCCCCCAGCATaGCTTGACAAGGAGCAGTCCAGTTCTCTCTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LFTLFLHICPPA*LDKEQSSSLSF Trigger: GAAAGAGAGAGAACTGGACTGCTCCTTGTCAAGGCATGCTGGGGGACAGATGTGCAGGAAGAGTGTGAAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR GCA 72 bp | TGCACACTGCCTTCTCAGACCACTCCCCGTCAGCTGTaGTGGGCCTCTAGAACTGATTTCATACTGAGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: CTLPSQTTPRQL*WASRTDFILSV Trigger: AACACTCAGTATGAAATCAGTTCTAGAGGCCCAGCACAGCTGACGGGGAGTGGTCTGAGAAGGCAGTGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR-3UTR CAA 90 bp | TCCATGCTGTTTCACAACACAGAGGCACTTATATATTCTTGGCAAAATGGACTTCTCCTGCAGAGGCCCTaGGAGCCAAGGAGGCCCCGC | + |
|
Preference number: 3 (lower is better) Translates to: SMLFHNTEALIYSWQNGLLLQRP*EPRRPR Trigger: GCGGGGCCTCCTTGGCTCCAAGGGCCTCTGCAGGAG...AAGTCCATTTTGCCAAGAATATATAAGTGCCTCTGTGTTGTGAAACAGCATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR-3UTR CAA 90 bp | TTACACCAACTGACCATGAAGAGTGACTGGGAGGCCAGGCATGGCCATCTGTGCGACTCCCAGAAAGGATaGCTACAAAGGTTCAAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LHQLTMKSDWEARHGHLCDSQKG*LQRFKG Trigger: ACCTTTGAACCTTTGTAGCAATCCTTTCTGGGAGTC...GCACAGATGGCCATGCCTGGCCTCCCAGTCACTCTTCATGGTCAGTTGGTGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR-3UTR CAA 90 bp | CTTTGGCACCTTGTCATTTTGTTCATGGGTCCCCTCCCTGCCACACTGGTACTAGGCACAGTGGGTTATTaGGCTTGTGTGACATTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LWHLVILFMGPLPATLVLGTVGY*ACVTLC Trigger: GCACAATGTCACACAAGCCAAATAACCCACTGTGCC...TAGTACCAGTGTGGCAGGGAGGGGACCCATGAACAAAATGACAAGGTGCCAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR GCA 72 bp | CATAGTGTCGCAGGGAACATGTGGCAACCTCTAAAATaGTCTAAGGTCCAGTCTGTGTCCAGTGAGGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: HSVAGNMWQPLK*SKVQSVSSEAA Trigger: TGCAGCCTCACTGGACACAGACTGGACCTTAGAGCATTTTAGAGGTTGCCACATGTTCCCTGCGACACTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR GCA 72 bp | TTGGCACCTTGTCATTTTGTTCATGGGTCCCCTCCCTaGCACACTGGTACTAGGACTGAGTTCACCCAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LAPCHFVHGSPP*HTGTRTEFTQE Trigger: TTCTTGGGTGAACTCAGTCCTAGTACCAGTGTGGCAGGGAGGGGACCCATGAACAAAATGACAAGGTGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR CCA 72 bp | CAGAGTTCAGCGGGACATAGTGTCGCAGGGAACATGTaGCAACCTCTAAAATGCTCTAAGGTCCAGTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: QSSAGHSVAGNM*QPLKCSKVQSV Trigger: CACAGACTGGACCTTAGAGCATTTTAGAGGTTGCCACATGTTCCCTGCGACACTATGTCCCGCTGAACTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR-3UTR CAA 90 bp | TTACACCAACTGACCATGAAGAGTGACTGGGAGGCCAGGCATGGCCATCTGTGCCTCTCTCATGCTTATTaGATGCTTGCAGATTCGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LHQLTMKSDWEARHGHLCLSHAY*MLADSS Trigger: TGACGAATCTGCAAGCATCAAATAAGCATGAGAGAG...GCACAGATGGCCATGCCTGGCCTCCCAGTCACTCTTCATGGTCAGTTGGTGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR-3UTR CAA 90 bp | CAGGATTGGAGGCACATACATCGGCTACTGAATCCTCAGGACAGCACCCACAACCACATGCAACCCACTTaGGCACCTTGTCATTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: QDWRHIHRLLNPQDSTHNHMQPT*APCHFV Trigger: AACAAAATGACAAGGTGCCAAAGTGGGTTGCATGTG...GTTGTGGGTGCTGTCCTGAGGATTCAGTAGCCGATGTATGTGCCTCCAATCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR TCA 72 bp | TTGGGCACAGGCTTACTGTATAATCCAGTATGGCCTTaGACCCACAGTGATCCTCCTGTCTCAGCCTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: LGTGLLYNPVWP*THSDPPVSASL Trigger: TAGAGAGGCTGAGACAGGAGGATCACTGTGGGTTCAAGGCCATACTGGATTATACAGTAAGCCTGTGCCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144120.2 |
||
| 3UTR GCA 72 bp | GCTACTGAATCCTCAGGACAGCACCCACAACCCACATaGAACCCACTTTGGCACCTTGTCATTTTGTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: ATESSGQHPQPT*NPLWHLVILFM Trigger: CATGAACAAAATGACAAGGTGCCAAAGTGGGTTGCATGTGGGTTGTGGGTGCTGTCCTGAGGATTCAGTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR TCA 72 bp | ACCCTGGCACCTTTGCCCTCTAACTCCAGGCTCCCATaGGTTAGAACTTTCCTTGCTTCAGTAAATACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: TLAPLPSNSRLP*VRTFLASVNTV Trigger: GACAGTATTTACTGAAGCAAGGAAAGTTCTAACTCATGGGAGCCTGGAGTTAGAGGGCAAAGGTGCCAGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR TCA 72 bp | GTCAGCTGTGCTGGGCCTCTAGAACTGATTTCATACTaGGTGTTTAACTTTGCTCTTGGTGCCGCCTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: VSCAGPLELISY*VFNFALGAASV Trigger: AACAGAGGCGGCACCAAGAGCAAAGTTAAACACTCAGTATGAAATCAGTTCTAGAGGCCCAGCACAGCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR GCA 72 bp | GACACACACTGTCAGCTGCTGTGCAGGCCAGCTCCATaGTGTTTCACAACACAGAGGCACTTATATATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: DTHCQLLCRPAP*CFTTQRHLYIL Trigger: AAGAATATATAAGTGCCTCTGTGTTGTGAAACAGCATGGAGCTGGCCTGCACAGCAGCTGACAGTGTGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR GCA 72 bp | TGTGACAACGTTTTCCTGACAGCAACCAAAGGTCCATaGTTGAACCTGTCAGATTACCCAAGGTGTACACCC | + |
|
Preference number: 3 (lower is better) Translates to: CDNVFLTATKGP*LNLSDYPRCTP Trigger: GGGTGTACACCTTGGGTAATCTGACAGGTTCAAGCATGGACCTTTGGTTGCTGTCAGGAAAACGTTGTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144120.2 |
||
| 3UTR GCA 72 bp | AATATAGTTGCCTTATTTCAGAAATGCCCTCTTCGGTaGAGGCTCTGTGTCCAGGATTGGAGGCACATACAT | + |
|
Preference number: 3 (lower is better) Translates to: NIVALFQKCPLR*RLCVQDWRHIH Trigger: ATGTATGTGCCTCCAATCCTGGACACAGAGCCTGCACCGAAGAGGGCATTTCTGAAATAAGGCAACTATATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR GCA 72 bp | GTTAGAACTTTCCTTGCTTCAGTAAATACTGTCACATaGTGCCACCCACTGGTGCACATTCTAAAATTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: VRTFLASVNTVT*CHPLVHILKLS Trigger: AGACAATTTTAGAATGTGCACCAGTGGGTGGCAGCATGTGACAGTATTTACTGAAGCAAGGAAAGTTCTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR-3UTR CAA 90 bp | TTCACAACACAGAGGCACTTATATATTCTTGGCAAAATGGACTTTATAATTGCCGAATGTCCCTGTGATTaGGCTCCAAGAACCCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: FTTQRHLYILGKMDFIIAECPCD*APRTHR Trigger: TCTGTGGGTTCTTGGAGCCAAATCACAGGGACATTC...GGCAATTATAAAGTCCATTTTGCCAAGAATATATAAGTGCCTCTGTGTTGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR CCA 90 bp | ACTGGGCCCTTTCTGGAATGGAACCTGGCCCTCCAGCTCCTGCAGAGGCCCTTGTCTTCCAGTAGCCGGTaGCCAGCAGCAGCCGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TGPFLEWNLALQLLQRPLSSSSR*PAAAGR Trigger: TCTCCCGGCTGCTGCTGGCCACCGGCTACTGGAAGA...CAAGGGCCTCTGCAGGAGCTGGAGGGCCAGGTTCCATTCCAGAAAGGGCCCAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR GCA 90 bp | ACTGGGCCCTTTCTGGAATGGAACCTGGCCCTCCAGCTCCTGCAGAGGCCCTTGTTCGAATGTCAAACTTaGGGTGGCCGGGCTCGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TGPFLEWNLALQLLQRPLFECQT*GGRARG Trigger: TCCTCGAGCCCGGCCACCGCAAGTTTGACATTCGAA...CAAGGGCCTCTGCAGGAGCTGGAGGGCCAGGTTCCATTCCAGAAAGGGCCCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR GCA 90 bp | CAGGATTGGAGGCACATACATCGGCTACTGAATCCTCAGGACAGCACCCACAACAACGCAGCCGGCTGCTaGGGCACCTGCTCCGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QDWRHIHRLLNPQDSTHNNAAGC*GTCSVS Trigger: GGACACGGAGCAGGTGCCGCAGCAGCCGGCTGCGTT...GTTGTGGGTGCTGTCCTGAGGATTCAGTAGCCGATGTATGTGCCTCCAATCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR TCA 90 bp | GGAAATGGCTCAGCTAAGCCCCTCCCACCAGGCAGGGCTGCCATGTTGATCATGGCTCCTCGTCCACCATaGAGTCAAAGCCGAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GNGSAKPLPPGRAAMLIMAPRPP*SQSRGA Trigger: AGCTCCTCGGCTTTGACTTCATGGTGGACGAGGAGC...CATGATCAACATGGCAGCCCTGCCTGGTGGGAGGGGCTTAGCTGAGCCATTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144120.2 |
||
| CDS-3UTR GCA 90 bp | ACTGGGCCCTTTCTGGAATGGAACCTGGCCCTCCAGCTCCTGCAGAGGCCCTTGGCCCTGGCACAGTTCTaGATAGAGTTTCTGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: TGPFLEWNLALQLLQRPLALAQF*IEFLGT Trigger: TGTGCCCAGAAACTCTATGCAGAACTGTGCCAGGGC...CAAGGGCCTCTGCAGGAGCTGGAGGGCCAGGTTCCATTCCAGAAAGGGCCCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR CCA 90 bp | GCCTTCACTGACAGGCCAGGGCACAGCCCGGACTGTGATGCATGCTGGTCCAGAGGATGCCCTCACCTTTaGCACCAGCTGATGACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AFTDRPGHSPDCDACWSRGCPHL*HQLMTL Trigger: CAAAGTCATCAGCTGGTGCCAAAGGTGAGGGCATCC...TCTGGACCAGCATGCATCACAGTCCGGGCTGTGCCCTGGCCTGTCAGTGAAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR TCA 90 bp | ACTCAGGCAGGCACACCCTCACTGAGAGGGCGTCTCTCCTGTCACTTACATGCAGCTCCTCGTCCACCATaGAGTCAAAGCCGAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TQAGTPSLRGRLSCHLHAAPRPP*SQSRGA Trigger: AGCTCCTCGGCTTTGACTTCATGGTGGACGAGGAGC...TGCATGTAAGTGACAGGAGAGACGCCCTCTCAGTGAGGGTGTGCCTGCCTGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR TCA 90 bp | TTACACCAACTGACCATGAAGAGTGACTGGGAGGCCAGGCATGGCCATCTGTGCAAGCTCCGATGCCTCTaGGGAGATGAGGATGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHQLTMKSDWEARHGHLCKLRCL*GDEDAL Trigger: GAGGGCATCCTCATCTCCTCAGAGGCATCGGAGCTT...GCACAGATGGCCATGCCTGGCCTCCCAGTCACTCTTCATGGTCAGTTGGTGTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR TCA 90 bp | TTGGCACCTTGTCATTTTGTTCATGGGTCCCCTCCCTGCCACACTGGTACTAGGGGAGGTGTTTGGTGCTaGTGGCGGGCTCCACACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LAPCHFVHGSPPCHTGTRGGVWC*WRAPHS Trigger: TGAGTGTGGAGCCCGCCATCAGCACCAAACACCTCC...CCTAGTACCAGTGTGGCAGGGAGGGGACCCATGAACAAAATGACAAGGTGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR TCA 90 bp | TCAGCTAAGCCCCTCCCACCAGGCAGGGCTGCCATGTTGATCATGTCTACTAAAGGAGGTGTTTGGTGCTaGTGGCGGGCTCCACACTCA | + |
|
Preference number: 4 (lower is better) Translates to: SAKPLPPGRAAMLIMSTKGGVWC*WRAPHS Trigger: TGAGTGTGGAGCCCGCCATCAGCACCAAACACCTCC...TTTAGTAGACATGATCAACATGGCAGCCCTGCCTGGTGGGAGGGGCTTAGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144120.2 |
||
| CDS-3UTR CCA 90 bp | GGAAATGGCTCAGCTAAGCCCCTCCCACCAGGCAGGGCTGCCATGTTGATCATGGGATGCCCTCACCTTTaGCACCAGCTGATGACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GNGSAKPLPPGRAAMLIMGCPHL*HQLMTL Trigger: CAAAGTCATCAGCTGGTGCCAAAGGTGAGGGCATCC...CATGATCAACATGGCAGCCCTGCCTGGTGGGAGGGGCTTAGCTGAGCCATTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144120.2 |
||
| CDS-3UTR CCA 90 bp | CAGGATTGGAGGCACATACATCGGCTACTGAATCCTCAGGACAGCACCCACAACCTCCGTGTCCGGGGGTaGGAAGACACTGGATATGGC | + |
|
Preference number: 4 (lower is better) Translates to: QDWRHIHRLLNPQDSTHNLRVRG*EDTGYG Trigger: GCCATATCCAGTGTCTTCCCACCCCCGGACACGGAG...GTTGTGGGTGCTGTCCTGAGGATTCAGTAGCCGATGTATGTGCCTCCAATCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR CCA 90 bp | CACGCTCACCCTGAATACACGAGACTCTTCCTGACACCACCATGGAAGCGGGCTGGGGTGGGAAGACACTaGATATGGCTATGTCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: HAHPEYTRLFLTPPWKRAGVGRH*IWLCPR Trigger: TCGTGGACATAGCCATATCCAGTGTCTTCCCACCCC...AGCCCGCTTCCATGGTGGTGTCAGGAAGAGTCTCGTGTATTCAGGGTGAGCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR CAA 72 bp | AGCACCCACAACCCACATGCAACCCACTTTGGCACCTaGTCATTTTGTTCATGGGTCCCCTCCCTGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: STHNPHATHFGT*SFCSWVPSLPH Trigger: GTGTGGCAGGGAGGGGACCCATGAACAAAATGACAAGGTGCCAAAGTGGGTTGCATGTGGGTTGTGGGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR CAA 72 bp | CTCAGGACAGCACCCACAACCCACATGCAACCCACTTaGGCACCTTGTCATTTTGTTCATGGGTCCCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LRTAPTTHMQPT*APCHFVHGSPP Trigger: GGGAGGGGACCCATGAACAAAATGACAAGGTGCCAAAGTGGGTTGCATGTGGGTTGTGGGTGCTGTCCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR CAA 72 bp | CAGACTCTACTGTGTGGCCACCTGCCTGAGAAGCCCTaGAACGTCACAGTCTCTCTTACTCACAGGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QTLLCGHLPEKP*NVTVSLTHRPA Trigger: AGCTGGCCTGTGAGTAAGAGAGACTGTGACGTTCAAGGGCTTCTCAGGCAGGTGGCCACACAGTAGAGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144120.2 |
||
| CDS-3UTR TCA 90 bp | CTTTGGCACCTTGTCATTTTGTTCATGGGTCCCCTCCCTGCCACACTGGTACTACGACTCGGGGAACCATaGGCAGGACTCAGACAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LWHLVILFMGPLPATLVLRLGEP*AGLRQF Trigger: GAACTGTCTGAGTCCTGCTCATGGTTCCCCGAGTCG...TAGTACCAGTGTGGCAGGGAGGGGACCCATGAACAAAATGACAAGGTGCCAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR TCA 90 bp | AACCACAGGGAAATGGCTCAGCTAAGCCCCTCCCACCAGGCAGGGCTGCCATGTTGCTACTTTCTAAGGTaGTGTTCAGAGCGCTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: NHREMAQLSPSHQAGLPCCYFLR*CSERWL Trigger: TAACCAGCGCTCTGAACATCACCTTAGAAAGTAGCA...ACATGGCAGCCCTGCCTGGTGGGAGGGGCTTAGCTGAGCCATTTCCCTGTGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144120.2 |
||
| CDS-3UTR CCA 90 bp | GCGCTCCCCGATGTCCTGTGCATGTGTCATCCCACAGAGCTACTGACACACACTGGAAGACACTGGATATaGCTATGTCCACGATGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALPDVLCMCHPTELLTHTGRHWI*LCPRCP Trigger: AGGGCATCGTGGACATAGCCATATCCAGTGTCTTCC...AGTGTGTGTCAGTAGCTCTGTGGGATGACACATGCACAGGACATCGGGGAGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR CAA 72 bp | GAAATGCCCTCTTCGGTGCAGGCTCTGTGTCCAGGATaGGAGGCACATACATCGGCTACTGAATCCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EMPSSVQALCPG*EAHTSATESSG Trigger: TCCTGAGGATTCAGTAGCCGATGTATGTGCCTCCAATCCTGGACACAGAGCCTGCACCGAAGAGGGCATTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR GCA 90 bp | TCGGTGCAGGCTCTGTGTCCAGGATTGGAGGCACATACATCGGCTACTGAATCCTTACTAAGGAAGCTTTaGGGCACAGTTTGTCCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SVQALCPGLEAHTSATESLLRKL*GTVCPP Trigger: GGGCGGACAAACTGTGCCGCAAAGCTTCCTTAGTAA...GGATTCAGTAGCCGATGTATGTGCCTCCAATCCTGGACACAGAGCCTGCACCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR GCA 90 bp | AACCACAGGGAAATGGCTCAGCTAAGCCCCTCCCACCAGGCAGGGCTGCCATGTAGTACTCTTTCTGAATaGAGTGATTGGTCAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: NHREMAQLSPSHQAGLPCSTLSE*SDWSDG Trigger: GCCATCTGACCAATCACTGCATTCAGAAAGAGTACT...ACATGGCAGCCCTGCCTGGTGGGAGGGGCTTAGCTGAGCCATTTCCCTGTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144120.2 |
||
| CDS-3UTR CCA 90 bp | AAACATGCAGTGAGCAGCATACACTGGCGTCCACAGGACCCCTGGCAGGCGCTCTCTGAATGCAGTGATTaGTCAGATGGCAGGTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: KHAVSSIHWRPQDPWQALSECSD*SDGRSY Trigger: ATAAGACCTGCCATCTGACCAATCACTGCATTCAGA...GAGCGCCTGCCAGGGGTCCTGTGGACGCCAGTGTATGCTGCTCACTGCATGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR CCA 90 bp | AACCACAGGGAAATGGCTCAGCTAAGCCCCTCCCACCAGGCAGGGCTGCCATGTTCTGAATGCAGTGATTaGTCAGATGGCAGGTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: NHREMAQLSPSHQAGLPCSECSD*SDGRSY Trigger: ATAAGACCTGCCATCTGACCAATCACTGCATTCAGA...ACATGGCAGCCCTGCCTGGTGGGAGGGGCTTAGCTGAGCCATTTCCCTGTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144120.2 |
||
| 3UTR CAA 72 bp | TCACACTCTTCCTGCACATCTGTCCCCCAGCATGCCTaGACAAGGAGCAGTCCAGTTCTCTCTCTTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SHSSCTSVPQHA*TRSSPVLSLSS Trigger: AGAGGAAAGAGAGAGAACTGGACTGCTCCTTGTCAAGGCATGCTGGGGGACAGATGTGCAGGAAGAGTGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR CAA 72 bp | CATGGAGAGTGTAGCATGCGGTCGGCATTGAGAACCTaGGTACCAAAGGCCCCTGAGTCTTCCACTTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: HGECSMRSALRT*VPKAPESSTYS Trigger: AGAGTAAGTGGAAGACTCAGGGGCCTTTGGTACCAAGGTTCTCAATGCCGACCGCATGCTACACTCTCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR CAA 72 bp | CAACCCACATGCAACCCACTTTGGCACCTTGTCATTTaGTTCATGGGTCCCCTCCCTGCCACACTGGTACTA | + |
|
Preference number: 4 (lower is better) Translates to: QPTCNPLWHLVI*FMGPLPATLVL Trigger: TAGTACCAGTGTGGCAGGGAGGGGACCCATGAACAAAATGACAAGGTGCCAAAGTGGGTTGCATGTGGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR TCA 90 bp | ACTCAGGCAGGCACACCCTCACTGAGAGGGCGTCTCTCCTGTCACTTACATGCATGCTACTTTCTAAGGTaGTGTTCAGAGCGCTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: TQAGTPSLRGRLSCHLHACYFLR*CSERWL Trigger: TAACCAGCGCTCTGAACATCACCTTAGAAAGTAGCA...TGCATGTAAGTGACAGGAGAGACGCCCTCTCAGTGAGGGTGTGCCTGCCTGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR GCA 90 bp | TCACTTACATGCATATGCAGACTGGGCCCTTTCTGGAATGGAACCTGGCCCTCCTTGCAATCCAAACGTTaGCCTCCCCGTCCTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLTCICRLGPFWNGTWPSLQSKR*PPRPLS Trigger: AGAAAGAGGACGGGGAGGGCAACGTTTGGATTGCAA...GGAGGGCCAGGTTCCATTCCAGAAAGGGCCCAGTCTGCATATGCATGTAAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR TCA 90 bp | TCACTTACATGCATATGCAGACTGGGCCCTTTCTGGAATGGAACCTGGCCCTCCAACATGATATGGTTCTaGAGCAGTTCGAAGCACACC | + |
|
Preference number: 4 (lower is better) Translates to: SLTCICRLGPFWNGTWPSNMIWF*SSSKHT Trigger: GGTGTGCTTCGAACTGCTTCAGAACCATATCATGTT...GGAGGGCCAGGTTCCATTCCAGAAAGGGCCCAGTCTGCATATGCATGTAAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR TCA 90 bp | TCCATGCTGTTTCACAACACAGAGGCACTTATATATTCTTGGCAAAATGGACTTCCCCCAGCATCAGGTTaGACCTGGGGTTGTCTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SMLFHNTEALIYSWQNGLPPASG*TWGCLA Trigger: GGCGAGACAACCCCAGGTTCAACCTGATGCTGGGGG...AAGTCCATTTTGCCAAGAATATATAAGTGCCTCTGTGTTGTGAAACAGCATGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR TCA 90 bp | TTATTGTTATTTGCGGGCAGGATCTCATTCAAACATCTTGGGCACAGGCTTACTAAGCTCCGATGCCTCTaGGGAGATGAGGATGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLFAGRISFKHLGHRLTKLRCL*GDEDAL Trigger: GAGGGCATCCTCATCTCCTCAGAGGCATCGGAGCTT...AGTAAGCCTGTGCCCAAGATGTTTGAATGAGATCCTGCCCGCAAATAACAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144120.2 |
||
| CDS-3UTR TCA 90 bp | TTACACCAACTGACCATGAAGAGTGACTGGGAGGCCAGGCATGGCCATCTGTGCTTTCCCATAGTTCTTTaGGTACTCTTTCTGAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: LHQLTMKSDWEARHGHLCFPIVL*VLFLNA Trigger: TGCATTCAGAAAGAGTACTCAAAGAACTATGGGAAA...GCACAGATGGCCATGCCTGGCCTCCCAGTCACTCTTCATGGTCAGTTGGTGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR GCA 90 bp | TCCATGCTGTTTCACAACACAGAGGCACTTATATATTCTTGGCAAAATGGACTTGTAATTCACCAGCTGTaGCAGCCCAGGCTCGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: SMLFHNTEALIYSWQNGLVIHQL*QPRLVT Trigger: GGTCACGAGCCTGGGCTGGCACAGCTGGTGAATTAC...AAGTCCATTTTGCCAAGAATATATAAGTGCCTCTGTGTTGTGAAACAGCATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR GCA 90 bp | GAGAGCTATGAGGTGAGGAGTGTGAGGAAAAGGATTCTACCTTCTCTGACTCCCAGTACTCTTTCTGAATaGAGTGATTGGTCAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: ESYEVRSVRKRILPSLTPSTLSE*SDWSDG Trigger: GCCATCTGACCAATCACTGCATTCAGAAAGAGTACT...GGGAGTCAGAGAAGGTAGAATCCTTTTCCTCACACTCCTCACCTCATAGCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR GCA 90 bp | TTCACAACACAGAGGCACTTATATATTCTTGGCAAAATGGACTTTATAATTGCCCCTCGGCGTAGACGCTaGTATTCTCGTCGCGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: FTTQRHLYILGKMDFIIAPRRRR*YSRRAP Trigger: TGGTGCGCGACGAGAATAGCAGCGTCTACGCCGAGG...GGCAATTATAAAGTCCATTTTGCCAAGAATATATAAGTGCCTCTGTGTTGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR CAA 72 bp | ACCCATGACCCAGAAACAACATCTCATGGTACACTTTaGTGGACACTTAAAAGAAGCAGTGCAGAGCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: THDPETTSHGTL*WTLKRSSAELQ Trigger: TTGGAGCTCTGCACTGCTTCTTTTAAGTGTCCACAAAAGTGTACCATGAGATGTTGTTTCTGGGTCATGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR CAA 72 bp | TATTGTTATTTGCGGGCAGGATCTCATTCAAACATCTaGGGCACAGGCTTACTGTATAATCCAGTATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YCYLRAGSHSNI*GTGLLYNPVWP Trigger: AGGCCATACTGGATTATACAGTAAGCCTGTGCCCAAGATGTTTGAATGAGATCCTGCCCGCAAATAACAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144120.2 |
||
| CDS-3UTR GCA 90 bp | TTCACAACACAGAGGCACTTATATATTCTTGGCAAAATGGACTTTATAATTGCCTGGCTATGTCCACGATaGCCTGGCACAGTTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FTTQRHLYILGKMDFIIAWLCPR*PGTVLH Trigger: ATGCAGAACTGTGCCAGGGCATCGTGGACATAGCCA...GGCAATTATAAAGTCCATTTTGCCAAGAATATATAAGTGCCTCTGTGTTGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR CCA 90 bp | TTCACAACACAGAGGCACTTATATATTCTTGGCAAAATGGACTTTATAATTGCCACGTGCACTTGGCCCTaGCTGTCGATGAAATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FTTQRHLYILGKMDFIIATCTWP*LSMKSR Trigger: TCTGGATTTCATCGACAGCCAGGGCCAAGTGCACGT...GGCAATTATAAAGTCCATTTTGCCAAGAATATATAAGTGCCTCTGTGTTGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR TCA 90 bp | TTATTGTTATTTGCGGGCAGGATCTCATTCAAACATCTTGGGCACAGGCTTACTTTTCCCATAGTTCTTTaGGTACTCTTTCTGAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLFAGRISFKHLGHRLTFPIVL*VLFLNA Trigger: TGCATTCAGAAAGAGTACTCAAAGAACTATGGGAAA...AGTAAGCCTGTGCCCAAGATGTTTGAATGAGATCCTGCCCGCAAATAACAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144120.2 |
||
| CDS-3UTR CCA 90 bp | TCTCATGGTACACTTTTGTGGACACTTAAAAGAAGCAGTGCAGAGCTCCAAAAACGTCTTGAGGTTAGTTaGATAAATCACATACGACTC | + |
|
Preference number: 4 (lower is better) Translates to: SHGTLLWTLKRSSAELQKRLEVS*INHIRL Trigger: GAGTCGTATGTGATTTATCCAACTAACCTCAAGACG...TTTTTGGAGCTCTGCACTGCTTCTTTTAAGTGTCCACAAAAGTGTACCATGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| 3UTR CAA 72 bp | GTAACACCTCACTTCCTTTATACAGAGGGTATGGATTaGTTTAGGCTTATTACAAAACCTGTCAGAATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VTPHFLYTEGMD*FRLITKPVRIH Trigger: ATGAATTCTGACAGGTTTTGTAATAAGCCTAAACAAATCCATACCCTCTGTATAAAGGAAGTGAGGTGTTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS CCA 90 bp | GACGAACGCAGCCGGCTGCTGCGGCACCTGCTCCGTGTCCGGGGGTaGGAAGACACTGGATATGGCTATGTCCACGATGCCCTGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: DERSRLLRHLLRVRG*EDTGYGYVHDALAQ Trigger: CTGTGCCAGGGCATCGTGGACATAGCCATATCCAGTGTCTTCCCACCCCCGGACACGGAGCAGGTGCCGCAGCAGCCGGCTGCGTTCGTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS TCA 90 bp | CTAGTCTCCCGAAGGGCAGTCGGTTCCTCTCCCCCAGCATCAGGTTaGACCTGGGGTTGTCTCGCCGTAGCCTCTTCCAGTAGCCGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LVSRRAVGSSPPASG*TWGCLAVASSSSRW Trigger: CCACCGGCTACTGGAAGAGGCTACGGCGAGACAACCCCAGGTTCAACCTGATGCTGGGGGAGAGGAACCGACTGCCCTTCGGGAGACTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS CCA 90 bp | CCGGCTGCTGCGGCACCTGCTCCGTGTCCGGGGGTGGGAAGACACTaGATATGGCTATGTCCACGATGCCCTGGCACAGTTCTGCATAGA | + |
|
Preference number: 5 (lower is better) Translates to: PAAAAPAPCPGVGRH*IWLCPRCPGTVLHR Trigger: TCTATGCAGAACTGTGCCAGGGCATCGTGGACATAGCCATATCCAGTGTCTTCCCACCCCCGGACACGGAGCAGGTGCCGCAGCAGCCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS GCA 90 bp | CCGTGTCCGGGGGTGGGAAGACACTGGATATGGCTATGTCCACGATaGCCTGGCACAGTTCTGCATAGAGTTTCTGGGCACACGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PCPGVGRHWIWLCPR*PGTVLHRVSGHTLG Trigger: CCCCAGCGTGTGCCCAGAAACTCTATGCAGAACTGTGCCAGGGCATCGTGGACATAGCCATATCCAGTGTCTTCCCACCCCCGGACACGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR CAA 90 bp | GAAACCCTGGTAGCACAGAACCACAGGGAAATGGCTCAGCTAAGCCCCTCCCACCACGCTGGGGCGCCGTaGACTTCAATGAGCCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: ETLVAQNHREMAQLSPSHHAGAP*TSMSQT Trigger: GGTCTGGCTCATTGAAGTCAACGGCGCCCCAGCGTG...GTGGGAGGGGCTTAGCTGAGCCATTTCCCTGTGGTTCTGTGCTACCAGGGTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144120.2 |
||
| CDS CCA 90 bp | GCTGCGGCACCTGCTCCGTGTCCGGGGGTGGGAAGACACTGGATATaGCTATGTCCACGATGCCCTGGCACAGTTCTGCATAGAGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AAAPAPCPGVGRHWI*LCPRCPGTVLHRVS Trigger: AGAAACTCTATGCAGAACTGTGCCAGGGCATCGTGGACATAGCCATATCCAGTGTCTTCCCACCCCCGGACACGGAGCAGGTGCCGCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR CAA 90 bp | CACGCTCACCCTGAATACACGAGACTCTTCCTGACACCACCATGGAAGCGGGCTTTTGCAATCCAAACGTaGCCCTCCCCGTCCTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HAHPEYTRLFLTPPWKRAFAIQT*PSPSSF Trigger: GAAAGAGGACGGGGAGGGCAACGTTTGGATTGCAAA...AGCCCGCTTCCATGGTGGTGTCAGGAAGAGTCTCGTGTATTCAGGGTGAGCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS GCA 90 bp | GAAGACACTGGATATGGCTATGTCCACGATGCCCTGGCACAGTTCTaGATAGAGTTTCTGGGCACACGCTGGGGCGCCGTTGACTTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: EDTGYGYVHDALAQF*IEFLGTRWGAVDFN Trigger: ATTGAAGTCAACGGCGCCCCAGCGTGTGCCCAGAAACTCTATGCAGAACTGTGCCAGGGCATCGTGGACATAGCCATATCCAGTGTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR CAA 90 bp | ACTCAGGCAGGCACACCCTCACTGAGAGGGCGTCTCTCCTGTCACTTACATGCATTTACTAAGGAAGCTTaGCGGCACAGTTTGTCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: TQAGTPSLRGRLSCHLHAFTKEA*RHSLSA Trigger: GGCGGACAAACTGTGCCGCAAAGCTTCCTTAGTAAA...TGCATGTAAGTGACAGGAGAGACGCCCTCTCAGTGAGGGTGTGCCTGCCTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS CCA 90 bp | GGAGTTACTGACCGGAAGTTGGATGCCATTCTGCGCCGGAGCGACTaGCGTCTTGAGGTTAGTTGGATAAATCACATACGACTCGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GVTDRKLDAILRRSD*RLEVSWINHIRLGE Trigger: TTCCCCGAGTCGTATGTGATTTATCCAACTAACCTCAAGACGCCAGTCGCTCCGGCGCAGAATGGCATCCAACTTCCGGTCAGTAACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR CAA 90 bp | GAGAGCTATGAGGTGAGGAGTGTGAGGAAAAGGATTCTACCTTCTCTGACTCCCAGGTTGAACCTGGGGTaGTCTCGCCGTAGCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ESYEVRSVRKRILPSLTPRLNLG*SRRSLF Trigger: GAAGAGGCTACGGCGAGACAACCCCAGGTTCAACCT...GGGAGTCAGAGAAGGTAGAATCCTTTTCCTCACACTCCTCACCTCATAGCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR CAA 90 bp | CAGGATTGGAGGCACATACATCGGCTACTGAATCCTCAGGACAGCACCCACAACAGGATGCCCTCACCTTaGGCACCAGCTGATGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: QDWRHIHRLLNPQDSTHNRMPSP*APADDF Trigger: AAAGTCATCAGCTGGTGCCAAAGGTGAGGGCATCCT...GTTGTGGGTGCTGTCCTGAGGATTCAGTAGCCGATGTATGTGCCTCCAATCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR CAA 90 bp | TTGGCACCTTGTCATTTTGTTCATGGGTCCCCTCCCTGCCACACTGGTACTAGGCACCAGCTGATGACTTaGCAATCCAAACGTTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LAPCHFVHGSPPCHTGTRHQLMT*QSKRCP Trigger: AGGGCAACGTTTGGATTGCAAAGTCATCAGCTGGTG...CCTAGTACCAGTGTGGCAGGGAGGGGACCCATGAACAAAATGACAAGGTGCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS CCA 90 bp | AAGAAGAATTCTCTCTCATCTGTCCTGGAGTTACTGACCGGAAGTTaGATGCCATTCTGCGCCGGAGCGACTGGCGTCTTGAGGTTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: KKNSLSSVLELLTGS*MPFCAGATGVLRLV Trigger: AACTAACCTCAAGACGCCAGTCGCTCCGGCGCAGAATGGCATCCAACTTCCGGTCAGTAACTCCAGGACAGATGAGAGAGAATTCTTCTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS GCA 90 bp | TGCCCTCACCTTTGGCACCAGCTGATGACTTTGCAATCCAAACGTTaGCCTCCCCGTCCTCTTTCTTTCTGTTATAAGAAGCCAAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: CPHLWHQLMTLQSKR*PPRPLSFCYKKPRR Trigger: TCTTCTTGGCTTCTTATAACAGAAAGAAAGAGGACGGGGAGGGCAACGTTTGGATTGCAAAGTCATCAGCTGGTGCCAAAGGTGAGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR CAA 90 bp | TCTCATGGTACACTTTTGTGGACACTTAAAAGAAGCAGTGCAGAGCTCCAAAAATCCCCCAGCATCAGGTaGAACCTGGGGTTGTCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SHGTLLWTLKRSSAELQKSPSIR*NLGLSR Trigger: GCGAGACAACCCCAGGTTCAACCTGATGCTGGGGGA...TTTTTGGAGCTCTGCACTGCTTCTTTTAAGTGTCCACAAAAGTGTACCATGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS-3UTR CAA 90 bp | AGCCGATCTTCCTACTTGGTGGGAAGGAAATGCATAAAAATGGTTGAAGCTATGGTTACTGACCGGAAGTaGGATGCCATTCTGCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SRSSYLVGRKCIKMVEAMVTDRK*DAILRR Trigger: CCGGCGCAGAATGGCATCCAACTTCCGGTCAGTAAC...CATAGCTTCAACCATTTTTATGCATTTCCTTCCCACCAAGTAGGAAGATCGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS GCA 90 bp | GCGGGCTCCACACTCATGAGGCAGCTCCTTATTATGTGTTTGATTTaGAGCAAAATGCTACTTTCTAAGGTGATGTTCAGAGCGCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: AGSTLMRQLLIMCLI*SKMLLSKVMFRALV Trigger: AACCAGCGCTCTGAACATCACCTTAGAAAGTAGCATTTTGCTGCAAATCAAACACATAATAAGGAGCTGCCTCATGAGTGTGGAGCCCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035812.14 ENSMUST00000144120.2 |
||
| CDS-3UTR CAA 90 bp | GTTATTTGCGGGCAGGATCTCATTCAAACATCTTGGGCACAGGCTTACTGTATACACCAGCTGATGACTTaGCAATCCAAACGTTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VICGQDLIQTSWAQAYCIHQLMT*QSKRCP Trigger: AGGGCAACGTTTGGATTGCAAAGTCATCAGCTGGTG...TATACAGTAAGCCTGTGCCCAAGATGTTTGAATGAGATCCTGCCCGCAAATAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144120.2 |
||
| CDS-3UTR CAA 90 bp | TTATTGTTATTTGCGGGCAGGATCTCATTCAAACATCTTGGGCACAGGCTTACTAGGATGCCCTCACCTTaGGCACCAGCTGATGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLLFAGRISFKHLGHRLTRMPSP*APADDF Trigger: AAAGTCATCAGCTGGTGCCAAAGGTGAGGGCATCCT...AGTAAGCCTGTGCCCAAGATGTTTGAATGAGATCCTGCCCGCAAATAACAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144120.2 |
||
| CDS-3UTR CAA 90 bp | TTCACAACACAGAGGCACTTATATATTCTTGGCAAAATGGACTTTATAATTGCCCACGCTGGGGCGCCGTaGACTTCAATGAGCCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: FTTQRHLYILGKMDFIIAHAGAP*TSMSQT Trigger: GGTCTGGCTCATTGAAGTCAACGGCGCCCCAGCGTG...GGCAATTATAAAGTCCATTTTGCCAAGAATATATAAGTGCCTCTGTGTTGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS TCA 90 bp | CAGATGGCAGGTCTTATCTTGGAAATTATCAACATGATATGGTTCTaGAGCAGTTCGAAGCACACCCTCTCTATAGAGGTAGATGTTATA | + |
|
Preference number: 5 (lower is better) Translates to: QMAGLILEIINMIWF*SSSKHTLSIEVDVI Trigger: TATAACATCTACCTCTATAGAGAGGGTGTGCTTCGAACTGCTTCAGAACCATATCATGTTGATAATTTCCAAGATAAGACCTGCCATCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035812.14 ENSMUST00000144120.2 |
||
| CDS TCA 90 bp | TTCGAAGAACATTTCATTCCCTTCTTCGTATTTCCCATAGTTCTTTaGGTACTCTTTCTGAATGCAGTGATTGGTCAGATGGCAGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FEEHFIPFFVFPIVL*VLFLNAVIGQMAGL Trigger: AAGACCTGCCATCTGACCAATCACTGCATTCAGAAAGAGTACTCAAAGAACTATGGGAAATACGAAGAAGGGAATGAAATGTTCTTCGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035812.14 ENSMUST00000144120.2 |
||
| CDS TCA 90 bp | AAAATGCTACTTTCTAAGGTGATGTTCAGAGCGCTGGTTAGGTACTaGTTGAACTCTTCGAAGAACATTTCATTCCCTTCTTCGTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: KMLLSKVMFRALVRY*LNSSKNISFPSSYF Trigger: GAAATACGAAGAAGGGAATGAAATGTTCTTCGAAGAGTTCAATCAGTACCTAACCAGCGCTCTGAACATCACCTTAGAAAGTAGCATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035812.14 ENSMUST00000144120.2 |
||
| CDS GCA 90 bp | TCCCTTCTTCGTATTTCCCATAGTTCTTTGAGTACTCTTTCTGAATaGAGTGATTGGTCAGATGGCAGGTCTTATCTTGGAAATTATCAA | + |
|
Preference number: 5 (lower is better) Translates to: SLLRISHSSLSTLSE*SDWSDGRSYLGNYQ Trigger: TTGATAATTTCCAAGATAAGACCTGCCATCTGACCAATCACTGCATTCAGAAAGAGTACTCAAAGAACTATGGGAAATACGAAGAAGGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035812.14 ENSMUST00000144120.2 |
||
| CDS CCA 90 bp | CGTATTTCCCATAGTTCTTTGAGTACTCTTTCTGAATGCAGTGATTaGTCAGATGGCAGGTCTTATCTTGGAAATTATCAACATGATATG | + |
|
Preference number: 5 (lower is better) Translates to: RISHSSLSTLSECSD*SDGRSYLGNYQHDM Trigger: CATATCATGTTGATAATTTCCAAGATAAGACCTGCCATCTGACCAATCACTGCATTCAGAAAGAGTACTCAAAGAACTATGGGAAATACG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035812.14 ENSMUST00000144120.2 |
||
| CDS GCA 72 bp | CACAGCTTGACGAACGCAGCCGGCTGCTGCGGCACCTaGTCCGTGTCCGGGGGTGGGAAGACACTGGATATG | + |
|
Preference number: 6 (lower is better) Translates to: HSLTNAAGCCGT*SVSGGGKTLDM Trigger: CATATCCAGTGTCTTCCCACCCCCGGACACGGAGCAGGTGCCGCAGCAGCCGGCTGCGTTCGTCAAGCTGTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS CCA 72 bp | AGCCGGCTGCTGCGGCACCTGCTCCGTGTCCGGGGGTaGGAAGACACTGGATATGGCTATGTCCACGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: SRLLRHLLRVRG*EDTGYGYVHDA Trigger: GGCATCGTGGACATAGCCATATCCAGTGTCTTCCCACCCCCGGACACGGAGCAGGTGCCGCAGCAGCCGGCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS CCA 72 bp | GCGGCACCTGCTCCGTGTCCGGGGGTGGGAAGACACTaGATATGGCTATGTCCACGATGCCCTGGCACAGTT | + |
|
Preference number: 6 (lower is better) Translates to: AAPAPCPGVGRH*IWLCPRCPGTV Trigger: AACTGTGCCAGGGCATCGTGGACATAGCCATATCCAGTGTCTTCCCACCCCCGGACACGGAGCAGGTGCCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS CAA 72 bp | CCGAAGGGCAGTCGGTTCCTCTCCCCCAGCATCAGGTaGAACCTGGGGTTGTCTCGCCGTAGCCTCTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PKGSRFLSPSIR*NLGLSRRSLFQ Trigger: CTGGAAGAGGCTACGGCGAGACAACCCCAGGTTCAACCTGATGCTGGGGGAGAGGAACCGACTGCCCTTCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS TCA 72 bp | CGAAGGGCAGTCGGTTCCTCTCCCCCAGCATCAGGTTaGACCTGGGGTTGTCTCGCCGTAGCCTCTTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: RRAVGSSPPASG*TWGCLAVASSS Trigger: ACTGGAAGAGGCTACGGCGAGACAACCCCAGGTTCAACCTGATGCTGGGGGAGAGGAACCGACTGCCCTTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS CCA 72 bp | CCTGCTCCGTGTCCGGGGGTGGGAAGACACTGGATATaGCTATGTCCACGATGCCCTGGCACAGTTCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: PAPCPGVGRHWI*LCPRCPGTVLH Trigger: ATGCAGAACTGTGCCAGGGCATCGTGGACATAGCCATATCCAGTGTCTTCCCACCCCCGGACACGGAGCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS GCA 72 bp | GGATATGGCTATGTCCACGATGCCCTGGCACAGTTCTaGATAGAGTTTCTGGGCACACGCTGGGGCGCCGTT | + |
|
Preference number: 6 (lower is better) Translates to: GYGYVHDALAQF*IEFLGTRWGAV Trigger: AACGGCGCCCCAGCGTGTGCCCAGAAACTCTATGCAGAACTGTGCCAGGGCATCGTGGACATAGCCATATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS TCA 72 bp | CTGGCTGTCGATGAAATCCAGAAGCTCCGATGCCTCTaGGGAGATGAGGATGCCCTCACCTTTGGCACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LAVDEIQKLRCL*GDEDALTFGTS Trigger: GCTGGTGCCAAAGGTGAGGGCATCCTCATCTCCTCAGAGGCATCGGAGCTTCTGGATTTCATCGACAGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035812.14 ENSMUST00000144120.2 |
||
| CDS CCA 72 bp | TCTCTCTCATCTGTCCTGGAGTTACTGACCGGAAGTTaGATGCCATTCTGCGCCGGAGCGACTGGCGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SLSSVLELLTGS*MPFCAGATGVL Trigger: CAAGACGCCAGTCGCTCCGGCGCAGAATGGCATCCAACTTCCGGTCAGTAACTCCAGGACAGATGAGAGAGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS CCA 72 bp | CTGGCACAGTTCTGCATAGAGTTTCTGGGCACACGCTaGGGCGCCGTTGACTTCAATGAGCCAGACCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LAQFCIEFLGTR*GAVDFNEPDLQ Trigger: CTGAAGGTCTGGCTCATTGAAGTCAACGGCGCCCCAGCGTGTGCCCAGAAACTCTATGCAGAACTGTGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS CAA 72 bp | TTCTCTCTCATCTGTCCTGGAGTTACTGACCGGAAGTaGGATGCCATTCTGCGCCGGAGCGACTGGCGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: FSLICPGVTDRK*DAILRRSDWRL Trigger: AAGACGCCAGTCGCTCCGGCGCAGAATGGCATCCAACTTCCGGTCAGTAACTCCAGGACAGATGAGAGAGAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS TCA 72 bp | CCAAGAAGAATTCTCTCTCATCTGTCCTGGAGTTACTaGCCGGAAGTTGGATGCCATTCTGCGCCGGAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: PRRILSHLSWSY*PEVGCHSAPER Trigger: TCGCTCCGGCGCAGAATGGCATCCAACTTCCGGTCAGTAACTCCAGGACAGATGAGAGAGAATTCTTCTTGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS CCA 72 bp | GACCGGAAGTTGGATGCCATTCTGCGCCGGAGCGACTaGCGTCTTGAGGTTAGTTGGATAAATCACATACGA | + |
|
Preference number: 6 (lower is better) Translates to: DRKLDAILRRSD*RLEVSWINHIR Trigger: TCGTATGTGATTTATCCAACTAACCTCAAGACGCCAGTCGCTCCGGCGCAGAATGGCATCCAACTTCCGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS CAA 90 bp | CAAGAAGAATTCTCTCTCATCTGTCCTGGAGTTACTGACCGGAAGTaGGATGCCATTCTGCGCCGGAGCGACTGGCGTCTTGAGGTTAGT | + |
|
Preference number: 6 (lower is better) Translates to: QEEFSLICPGVTDRK*DAILRRSDWRLEVS Trigger: ACTAACCTCAAGACGCCAGTCGCTCCGGCGCAGAATGGCATCCAACTTCCGGTCAGTAACTCCAGGACAGATGAGAGAGAATTCTTCTTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS CAA 90 bp | CTGATGGCGGGCTCCACACTCATGAGGCAGCTCCTTATTATGTGTTaGATTTGCAGCAAAATGCTACTTTCTAAGGTGATGTTCAGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: LMAGSTLMRQLLIMC*ICSKMLLSKVMFRA Trigger: CGCTCTGAACATCACCTTAGAAAGTAGCATTTTGCTGCAAATCAAACACATAATAAGGAGCTGCCTCATGAGTGTGGAGCCCGCCATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035812.14 ENSMUST00000144120.2 |
||
| CDS GCA 72 bp | CTTTGGCACCAGCTGATGACTTTGCAATCCAAACGTTaGCCTCCCCGTCCTCTTTCTTTCTGTTATAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LWHQLMTLQSKR*PPRPLSFCYKK Trigger: CTTCTTATAACAGAAAGAAAGAGGACGGGGAGGGCAACGTTTGGATTGCAAAGTCATCAGCTGGTGCCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035812.14 |
||
| CDS CAA 72 bp | GGCTCCACACTCATGAGGCAGCTCCTTATTATGTGTTaGATTTGCAGCAAAATGCTACTTTCTAAGGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: GSTLMRQLLIMC*ICSKMLLSKVM Trigger: CATCACCTTAGAAAGTAGCATTTTGCTGCAAATCAAACACATAATAAGGAGCTGCCTCATGAGTGTGGAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035812.14 ENSMUST00000144120.2 |
||
| CDS TCA 72 bp | CTTTCTAAGGTGATGTTCAGAGCGCTGGTTAGGTACTaGTTGAACTCTTCGAAGAACATTTCATTCCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LSKVMFRALVRY*LNSSKNISFPS Trigger: AGAAGGGAATGAAATGTTCTTCGAAGAGTTCAATCAGTACCTAACCAGCGCTCTGAACATCACCTTAGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035812.14 ENSMUST00000144120.2 |
||
| CDS GCA 72 bp | CGTATTTCCCATAGTTCTTTGAGTACTCTTTCTGAATaGAGTGATTGGTCAGATGGCAGGTCTTATCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RISHSSLSTLSE*SDWSDGRSYLG Trigger: TCCAAGATAAGACCTGCCATCTGACCAATCACTGCATTCAGAAAGAGTACTCAAAGAACTATGGGAAATACG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035812.14 ENSMUST00000144120.2 |
||
| CDS CAA 90 bp | CTTCGAAGAACATTTCATTCCCTTCTTCGTATTTCCCATAGTTCTTaGAGTACTCTTTCTGAATGCAGTGATTGGTCAGATGGCAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: LRRTFHSLLRISHSS*STLSECSDWSDGRS Trigger: AGACCTGCCATCTGACCAATCACTGCATTCAGAAAGAGTACTCAAAGAACTATGGGAAATACGAAGAAGGGAATGAAATGTTCTTCGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035812.14 ENSMUST00000144120.2 |
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| CDS TCA 72 bp | GGTCTTATCTTGGAAATTATCAACATGATATGGTTCTaGAGCAGTTCGAAGCACACCCTCTCTATAGAGGTA | + |
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Preference number: 6 (lower is better) Translates to: GLILEIINMIWF*SSSKHTLSIEV Trigger: TACCTCTATAGAGAGGGTGTGCTTCGAACTGCTTCAGAACCATATCATGTTGATAATTTCCAAGATAAGACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035812.14 ENSMUST00000144120.2 |
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| CDS TCA 72 bp | CATTTCATTCCCTTCTTCGTATTTCCCATAGTTCTTTaGGTACTCTTTCTGAATGCAGTGATTGGTCAGATG | + |
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Preference number: 6 (lower is better) Translates to: HFIPFFVFPIVL*VLFLNAVIGQM Trigger: CATCTGACCAATCACTGCATTCAGAAAGAGTACTCAAAGAACTATGGGAAATACGAAGAAGGGAATGAAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035812.14 ENSMUST00000144120.2 |
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| CDS CAA 72 bp | ACATTTCATTCCCTTCTTCGTATTTCCCATAGTTCTTaGAGTACTCTTTCTGAATGCAGTGATTGGTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: TFHSLLRISHSS*STLSECSDWSD Trigger: ATCTGACCAATCACTGCATTCAGAAAGAGTACTCAAAGAACTATGGGAAATACGAAGAAGGGAATGAAATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035812.14 ENSMUST00000144120.2 |
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