Pregenerated sensors for TTK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038379Ensembl transcript IDs: ENSMUST00000070326.14, ENSMUST00000185913.7, ENSMUST00000191484.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | TTCCAACTGGTAGATTTCCTCAGAGATTCAAGAGTATaGCAGAGGAAACAATCTAGTGTTCTTGGTTTGTAC | + |
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Preference number: 3 (lower is better) Translates to: FQLVDFLRDSRV*QRKQSSVLGLY Trigger: GTACAAACCAAGAACACTAGATTGTTTCCTCTGCCATACTCTTGAATCTCTGAGGAAATCTACCAGTTGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR GCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCCCCTGCTGCTGTTGCTaGTGGAGGCGGGCAAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFPCCCC*WRRASW Trigger: CCAGCTTGCCCGCCTCCAGCAGCAACAGCAGCAGGG...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR GCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCAGTCCCTGCTGCTGTTaGTGCTGGAGGCGGGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFSPCCC*CWRRAS Trigger: GCTTGCCCGCCTCCAGCAGCAACAGCAGCAGGGACT...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR GCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCGGAGTGCTGAGTCCCTaGTGCTGTTGCTGCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFGVLSP*CCCCWR Trigger: CCTCCAGCAGCAACAGCAGCAGGGACTCAGCACTCC...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR CCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCCTCCATATAAAACCCTaGCTGCCCCAGCCTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFLHIKP*LPQPVL Trigger: GAGGACAGGCTGGGGCAGCCAGGGTTTTATATGGAG...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR TCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCTTTGAAGAGGAGTGCTaGGTCCCTGCTGCTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFFEEEC*VPAAVA Trigger: AGCAACAGCAGCAGGGACTCAGCACTCCTCTTCAAA...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR CCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCAAGGCAGCAGGGTTCTaGAACACACACTCGGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFKAAGF*NTHSGF Trigger: AAAGCCCGAGTGTGTGTTCCAGAACCCTGCTGCCTT...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR TCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCCTGTACATTTCCAAGTaGGCTGGAGAACGGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFLYISK*AGERLL Trigger: CAAGAGCCGTTCTCCAGCTCACTTGGAAATGTACAG...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR TCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCCTCTGGACTCACAGCTaGTGCTCCGATTCTGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFLWTHS*CSDSVH Trigger: ATGTACAGAATCGGAGCATCAGCTGTGAGTCCAGAG...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR TCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCGAAATCTGCAAGCTTTaGAGAGGAGTGCTGAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFEICKL*RGVLSP Trigger: GGGACTCAGCACTCCTCTTCAAAGCTTGCAGATTTC...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR CCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCAGCCATTTGGCTGCCTaGATGGGGCTGAATTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFSHLAA*MGLNLN Trigger: GTTCAAATTCAGCCCCATCCAGGCAGCCAAATGGCT...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR TCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCGGCTGTTTAGAAGATTaGCTGGGACTCTTCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFGCLED*LGLFQR Trigger: CCTTTGGAAGAGTCCCAGTCAATCTTCTAAACAGCC...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR TCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCAAGAAGACATGTCTCTaGTTGCTTCTGGGGCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFKKTCL*LLLGPY Trigger: ATATGGCCCCAGAAGCAATCAGAGACATGTCTTCTT...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070326.14 |
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| CDS-3UTR TCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCGGAAATTCAATCTCATaGGCAGGGTTGATTATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFGNSIS*AGLIMA Trigger: CGCCATAATCAACCCTGCTCATGAGATTGAATTTCC...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR GCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCCAATCGTCACACTGCTaGCAATTAACTCTTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFQSSHC*QLTLQP Trigger: AGGCTGAAGAGTTAATTGGCAGCAGTGTGACGATTG...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR GCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCCATGGGCCTTCTTTCTaGAATCTCTGGCTTAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFHGPSF*NLWLSF Trigger: GAAACTAAGCCAGAGATTGCAGAAAGAAGGCCCATG...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR GCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCCTTGTTGTGTCTGGCTaGATTTGGTTTGCAATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFLVVSG*IWFAIP Trigger: TGGGATTGCAAACCAAATGCAGCCAGACACAACAAG...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR CCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCCTGGCCGTATTTATCTaGAGGAAGTACTTCAATCGC | + |
|
Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFLAVFI*RKYFNR Trigger: GCGATTGAAGTACTTCCTCCAGATAAATACGGCCAG...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR CCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCGCAAAGCTCTCATTCTaGCCGTATTTATCTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFAKLSF*PYLSGG Trigger: TCCTCCAGATAAATACGGCCAGAATGAGAGCTTTGC...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR CCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCAGCAGCTGCTTTTTCTaGAGGTGTAAGTTACGCATG | + |
|
Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFSSCFF*RCKLRM Trigger: CATGCGTAACTTACACCTCCAGAAAAAGCAGCTGCT...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR TCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCCTCTCATTTTGCTCATaGTGGAATCAATCGTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFLSFCS*WNQSSH Trigger: GTGTGACGATTGATTCCATCATGAGCAAAATGAGAG...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR TCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCAATCATAGAGGCGGATaGTCTTATCACTGTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFNHRGG*SYHCVA Trigger: AGCAACACAGTGATAAGATCATCCGCCTCTATGATT...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR TCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCAGATGTACTGCTCGGTaGTTTCATAATCATAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFRCTAR*FHNHRG Trigger: GCCTCTATGATTATGAAATCACCGAGCAGTACATCT...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR GCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCCAAAAGCAAACTTCTTaGAGTTTTCCCTGGCCATCT | + |
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Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFQKQTS*SFPWPS Trigger: AGATGGCCAGGGAAAACTGCAAGAAGTTTGCTTTTG...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR GCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCTACTGGAACCTCCACTaGCTATCTGCTTTAATATGG | + |
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Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFYWNLH*LSALIW Trigger: CCATATTAAAGCAGATAGGCAGTGGAGGTTCCAGTA...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR GCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCTCATGTAGTACAAAATaGACCCCAAGGACCAGACAT | + |
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Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFSCSTK*TPRTRH Trigger: ATGTCTGGTCCTTGGGGTGCATTTTGTACTACATGA...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070326.14 |
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| CDS-3UTR CCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCCTCACAAGCAGACTTTaGATCAAGCCATTTAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFLTSRL*IKPFRN Trigger: GTTCCTAAATGGCTTGATCCAAAGTCTGCTTGTGAG...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR CCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCGTGTCTGGCTGCATTTaGTTTGCAATCCCAAAATCA | + |
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Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFVSGCI*FAIPKS Trigger: TGATTTTGGGATTGCAAACCAAATGCAGCCAGACAC...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR CCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCGTCTCTGATTGCTTCTaGGGCCATATAGTTAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFVSDCF*GHIVNC Trigger: ACAGTTAACTATATGGCCCCAGAAGCAATCAGAGAC...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070326.14 |
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| CDS-3UTR TCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCGTCTCTACAGCTTTATaGAGAAGCTGCTCACTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFVSTAL*RSCSLF Trigger: AAAAAGTGAGCAGCTTCTTCATAAAGCTGTAGAGAC...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR TCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCGACTTACCTTGGTCCTaGTTTTCGAATTTTCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFDLPWS*FSNFLL Trigger: CAAGAGAAAATTCGAAAATCAGGACCAAGGTAAGTC...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070326.14 |
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| CDS-3UTR CCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCAATGCTTGTTGTGTCTaGCTGCATTTGGTTTGCAAT | + |
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Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFNACCV*LHLVCN Trigger: ATTGCAAACCAAATGCAGCCAGACACAACAAGCATT...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR TCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCTTAACTGTGCCAACCTaGGAATCTTTAACAATGCTT | + |
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Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFLTVPT*ESLTML Trigger: AAGCATTGTTAAAGATTCTCAGGTTGGCACAGTTAA...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070326.14 |
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| CDS-3UTR TCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCTTCAGACCAACAAGTTaGCCCAACACATATTTCATT | + |
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Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFFRPTS*PNTYFI Trigger: AATGAAATATGTGTTGGGTCAACTTGTTGGTCTGAA...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR TCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCTGCAGTTTAGAGACCTaGGAATCTTTAACAATGCTT | + |
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Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFCSLET*ESLTML Trigger: AAGCATTGTTAAAGATTCTCAGGTCTCTAAACTGCA...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185913.7 |
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| CDS-3UTR CCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCCAGAACTCTTTTCATTaGACACCAAAGAGTCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFQNSFH*TPKSLS Trigger: TGAAAGACTCTTTGGTGTCCAATGAAAAGAGTTCTG...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR CCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCTCTTTCTGCAATCTCTaGCTTAGTTTCTTCCAATTT | + |
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Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFSFCNL*LSFFQF Trigger: AAATTGGAAGAAACTAAGCCAGAGATTGCAGAAAGA...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR CCA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCTTTTGTCAAAAGTCTTaGATGACGAAGAATCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFFCQKS*MTKNLD Trigger: GTCAAGATTCTTCGTCATCCAAGACTTTTGACAAAA...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS CCA 90 bp | CCTCCTCCGGAAGCAGCTGCTTTTTCTGGAGGTGTAAGTTACGCATaGCCGTCTCCAGCATCTGCAGCGGCACCGCCCCAGTCTCTACAG | + |
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Preference number: 5 (lower is better) Translates to: PPPEAAAFSGGVSYA*PSPASAAAPPQSLQ Trigger: CTGTAGAGACTGGGGCGGTGCCGCTGCAGATGCTGGAGACGGCCATGCGTAACTTACACCTCCAGAAAAAGCAGCTGCTTCCGGAGGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS CCA 90 bp | GCTGACACACTCTTCTTGTCCTCCTCCGGAAGCAGCTGCTTTTTCTaGAGGTGTAAGTTACGCATGGCCGTCTCCAGCATCTGCAGCGGC | + |
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Preference number: 5 (lower is better) Translates to: ADTLFLSSSGSSCFF*RCKLRMAVSSICSG Trigger: GCCGCTGCAGATGCTGGAGACGGCCATGCGTAACTTACACCTCCAGAAAAAGCAGCTGCTTCCGGAGGAGGACAAGAAGAGTGTGTCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS TCA 90 bp | CATATAAAACCCTGGCTGCCCCAGCCTGTCCTCTGGACTCACAGCTaGTGCTCCGATTCTGTACATTTCCAAGTGAGCTGGAGAACGGCT | + |
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Preference number: 5 (lower is better) Translates to: HIKPWLPQPVLWTHS*CSDSVHFQVSWRTA Trigger: AGCCGTTCTCCAGCTCACTTGGAAATGTACAGAATCGGAGCATCAGCTGTGAGTCCAGAGGACAGGCTGGGGCAGCCAGGGTTTTATATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS GCA 90 bp | GCAGGGTTCTGGAACACACACTCGGGCTTTCTGGTAGACTGCCACTaGATGGGCCTTCTTTCTGCAATCTCTGGCTTAGTTTCTTCCAAT | + |
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Preference number: 5 (lower is better) Translates to: AGFWNTHSGFLVDCH*MGLLSAISGLVSSN Trigger: ATTGGAAGAAACTAAGCCAGAGATTGCAGAAAGAAGGCCCATGCAGTGGCAGTCTACCAGAAAGCCCGAGTGTGTGTTCCAGAACCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR CAA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCGAGTCCCTGCTGCTGTaGCTGCTGGAGGCGGGCAAG | + |
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Preference number: 5 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFESLLL*LLEAGK Trigger: CTTGCCCGCCTCCAGCAGCAACAGCAGCAGGGACTC...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR CAA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCGGCTCCCCTAGCCATTaGGCTGCCTGGATGGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFGSPSH*AAWMGL Trigger: CAGCCCCATCCAGGCAGCCAAATGGCTAGGGGAGCC...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS TCA 90 bp | GAAATGCATTCATTTATTGATGAAGAACCTGAAATCTGCAAGCTTTaGAGAGGAGTGCTGAGTCCCTGCTGCTGTTGCTGCTGGAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: EMHSFIDEEPEICKL*RGVLSPCCCCCWRR Trigger: CCGCCTCCAGCAGCAACAGCAGCAGGGACTCAGCACTCCTCTTCAAAGCTTGCAGATTTCAGGTTCTTCATCAATAAATGAATGCATTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS CCA 90 bp | GATTATGGCGTGCAGTTTAGAGACCTGATTGATGATGTGCTGAAATaGCGTCCTCCCATAAGTCATGTAGTACAAAATGCACCCCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: DYGVQFRDLIDDVLK*RPPISHVVQNAPQG Trigger: TCCTTGGGGTGCATTTTGTACTACATGACTTATGGGAGGACGCCATTTCAGCACATCATCAATCAGGTCTCTAAACTGCACGCCATAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070326.14 |
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| CDS-3UTR CAA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCCTGCTTGAAGGGGTTTaGATGCCTCACTTCGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFLLEGV*MPHFGI Trigger: GATGCCGAAGTGAGGCATCAAAACCCCTTCAAGCAG...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS TCA 90 bp | TCTGGGGTGTTCCCAACCCTCATAATTTGGTTAACAGTTTCCGTGTaGTCGGCACAGATTTTAGACAAGCTTAGCTCATCAGTACAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGVFPTLIIWLTVSV*SAQILDKLSSSVQS Trigger: AGACTGTACTGATGAGCTAAGCTTGTCTAAAATCTGTGCCGATCACACGGAAACTGTTAACCAAATTATGAGGGTTGGGAACACCCCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 ENSMUST00000191484.2 |
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| CDS-3UTR CAA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCGGGCTGTTTAGAAGATaGACTGGGACTCTTCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFGLFRR*TGTLPK Trigger: CTTTGGAAGAGTCCCAGTCAATCTTCTAAACAGCCC...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS GCA 90 bp | CTTCAGATCACTATGAACAATACCATGCTGATGGATTATGTGTACTaGCTCCAACATGTTTTTCCAGTAGCTCTTGCGTTCCCATGGATT | + |
|
Preference number: 5 (lower is better) Translates to: LQITMNNTMLMDYVY*LQHVFPVALAFPWI Trigger: AATCCATGGGAACGCAAGAGCTACTGGAAAAACATGTTGGAGGCAGTACACATAATCCATCAGCATGGTATTGTTCATAGTGATCTGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR CAA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCCCCAACCCTCATAATTaGGTTAACAGTTTCCGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFPNPHN*VNSFRV Trigger: CACACGGAAACTGTTAACCAAATTATGAGGGTTGGG...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR CAA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCACAAAAGCAAACTTCTaGCAGTTTTCCCTGGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFTKANF*QFSLAI Trigger: GATGGCCAGGGAAAACTGCAAGAAGTTTGCTTTTGT...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS TCA 90 bp | TTTGCAGTTTTCAAGATGGAGTTAGGAGAATTCAGACCAACAAGTTaGCCCAACACATATTTCATTTCATCAGTGGCTCCCCTAGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: FAVFKMELGEFRPTS*PNTYFISSVAPLAI Trigger: AATGGCTAGGGGAGCCACTGATGAAATGAAATATGTGTTGGGTCAACTTGTTGGTCTGAATTCTCCTAACTCCATCTTGAAAACTGCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR CAA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCCTGTGTTGCTGTAGTTaGTTCAAAAACGCTATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFLCCCS*FKNAIS Trigger: CGAGATAGCGTTTTTGAACAAACTACAGCAACACAG...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS-3UTR CAA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCCTTCTGGGACTTACCTaGGTCCTGATTTTCGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFLLGLT*VLIFEF Trigger: AAATTCGAAAATCAGGACCAAGGTAAGTCCCAGAAG...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070326.14 |
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| CDS-3UTR CAA 90 bp | ACTGATAAAATCCAGGTGAGGTTGTTTCCAACTGGTAGATTTCCTCAGAGATTCCTGGCTGCATTTGGTTaGCAATCCCAAAATCAATTA | + |
|
Preference number: 5 (lower is better) Translates to: TDKIQVRLFPTGRFPQRFLAAFG*QSQNQL Trigger: TAATTGATTTTGGGATTGCAAACCAAATGCAGCCAG...GAATCTCTGAGGAAATCTACCAGTTGGAAACAACCTCACCTGGATTTTATCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS GCA 90 bp | AGAATCTTGACCTTCACCACAATTATAACGTTCATACAAAGTTTTTaGAGTTTTCAAGATGGAGTTAGGAGAATTCAGACCAACAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RILTFTTIITFIQSF*SFQDGVRRIQTNKL Trigger: CAACTTGTTGGTCTGAATTCTCCTAACTCCATCTTGAAAACTGCAAAAACTTTGTATGAACGTTATAATTGTGGTGAAGGTCAAGATTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS GCA 72 bp | AGCCTTCGGGGTGACATCTGGAACGTGCCGCAGGGGTaGAAAGGCAGCAGGGTTCTGGAACACACACTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: SLRGDIWNVPQG*KGSRVLEHTLG Trigger: CCCGAGTGTGTGTTCCAGAACCCTGCTGCCTTTGCACCCCTGCGGCACGTTCCAGATGTCACCCCGAAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS CCA 72 bp | GAAGCAGCTGCTTTTTCTGGAGGTGTAAGTTACGCATaGCCGTCTCCAGCATCTGCAGCGGCACCGCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: EAAAFSGGVSYA*PSPASAAAPPQ Trigger: CTGGGGCGGTGCCGCTGCAGATGCTGGAGACGGCCATGCGTAACTTACACCTCCAGAAAAAGCAGCTGCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS CCA 72 bp | AACCTCTCAGTTCATAGGAATCACTGCCACGTGGTCTaGAGCCGGGCAGAATCGCGTCTCGGTCTGGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: NLSVHRNHCHVV*SRAESRLGLVL Trigger: CAGGACCAGACCGAGACGCGATTCTGCCCGGCTCCAGACCACGTGGCAGTGATTCCTATGAACTGAGAGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS CAA 72 bp | CAAGCTTTGAAGAGGAGTGCTGAGTCCCTGCTGCTGTaGCTGCTGGAGGCGGGCAAGCTGGCTGTAAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: QALKRSAESLLL*LLEAGKLAVRC Trigger: ACACCTTACAGCCAGCTTGCCCGCCTCCAGCAGCAACAGCAGCAGGGACTCAGCACTCCTCTTCAAAGCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS TCA 72 bp | CTGATATTGGTGGTGACTCTTTGTCAGCCTTCGGGGTaGCATCTGGAACGTGCCGCAGGGGTGCAAAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LILVVTLCQPSG*HLERAAGVQRQ Trigger: CTGCCTTTGCACCCCTGCGGCACGTTCCAGATGTCACCCCGAAGGCTGACAAAGAGTCACCACCAATATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS CAA 90 bp | CCTGCTGCTGTTGCTGCTGGAGGCGGGCAAGCTGGCTGTAAGGTGTaGATGATGGACAGGCAGGTGGAAAGTCATTCTTTACAACTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PAAVAAGGGQAGCKV*MMDRQVESHSLQLE Trigger: CTCCAGTTGTAAAGAATGACTTTCCACCTGCCTGTCCATCATCAACACCTTACAGCCAGCTTGCCCGCCTCCAGCAGCAACAGCAGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS GCA 72 bp | GCTGACACACTCTTCTTGTCCTCCTCCGGAAGCAGCTaGTTTTTCTGGAGGTGTAAGTTACGCATGGCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: ADTLFLSSSGSS*FFWRCKLRMAV Trigger: GACGGCCATGCGTAACTTACACCTCCAGAAAAAGCAGCTGCTTCCGGAGGAGGACAAGAAGAGTGTGTCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS CCA 72 bp | CTCTTCTTGTCCTCCTCCGGAAGCAGCTGCTTTTTCTaGAGGTGTAAGTTACGCATGGCCGTCTCCAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: LFLSSSGSSCFF*RCKLRMAVSSI Trigger: GATGCTGGAGACGGCCATGCGTAACTTACACCTCCAGAAAAAGCAGCTGCTTCCGGAGGAGGACAAGAAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS CAA 72 bp | TGGGCACTTAGTACTGTCGATGCTGACACACTCTTCTaGTCCTCCTCCGGAAGCAGCTGCTTTTTCTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: WALSTVDADTLF*SSSGSSCFFWR Trigger: CCTCCAGAAAAAGCAGCTGCTTCCGGAGGAGGACAAGAAGAGTGTGTCAGCATCGACAGTACTAAGTGCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS CAA 72 bp | GTTGCTGCTGGAGGCGGGCAAGCTGGCTGTAAGGTGTaGATGATGGACAGGCAGGTGGAAAGTCATTCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: VAAGGGQAGCKV*MMDRQVESHSL Trigger: TAAAGAATGACTTTCCACCTGCCTGTCCATCATCAACACCTTACAGCCAGCTTGCCCGCCTCCAGCAGCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS GCA 72 bp | TGGAACACACACTCGGGCTTTCTGGTAGACTGCCACTaGATGGGCCTTCTTTCTGCAATCTCTGGCTTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: WNTHSGFLVDCH*MGLLSAISGLV Trigger: AACTAAGCCAGAGATTGCAGAAAGAAGGCCCATGCAGTGGCAGTCTACCAGAAAGCCCGAGTGTGTGTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS CCA 72 bp | CATTTCATCAGTGGCTCCCCTAGCCATTTGGCTGCCTaGATGGGGCTGAATTTGAACATACGGATGTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: HFISGSPSHLAA*MGLNLNIRMCE Trigger: CTCACACATCCGTATGTTCAAATTCAGCCCCATCCAGGCAGCCAAATGGCTAGGGGAGCCACTGATGAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS CAA 72 bp | TCAAGCCATTTAGGAACTGATATTGGTGGTGACTCTTaGTCAGCCTTCGGGGTGACATCTGGAACGTGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SSHLGTDIGGDS*SAFGVTSGTCR Trigger: GCGGCACGTTCCAGATGTCACCCCGAAGGCTGACAAAGAGTCACCACCAATATCAGTTCCTAAATGGCTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS CAA 90 bp | AACGGCTCTTGGGCACTTAGTACTGTCGATGCTGACACACTCTTCTaGTCCTCCTCCGGAAGCAGCTGCTTTTTCTGGAGGTGTAAGTTA | + |
|
Preference number: 6 (lower is better) Translates to: NGSWALSTVDADTLF*SSSGSSCFFWRCKL Trigger: TAACTTACACCTCCAGAAAAAGCAGCTGCTTCCGGAGGAGGACAAGAAGAGTGTGTCAGCATCGACAGTACTAAGTGCCCAAGAGCCGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS GCA 72 bp | GAAATGGCGTCCTCCCATAAGTCATGTAGTACAAAATaGACCCCAAGGACCAGACATCACTTCTGGGACTTA | + |
|
Preference number: 6 (lower is better) Translates to: EMASSHKSCSTK*TPRTRHHFWDL Trigger: TAAGTCCCAGAAGTGATGTCTGGTCCTTGGGGTGCATTTTGTACTACATGACTTATGGGAGGACGCCATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070326.14 |
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| CDS TCA 72 bp | TCATTTATTGATGAAGAACCTGAAATCTGCAAGCTTTaGAGAGGAGTGCTGAGTCCCTGCTGCTGTTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SFIDEEPEICKL*RGVLSPCCCCC Trigger: GCAGCAACAGCAGCAGGGACTCAGCACTCCTCTTCAAAGCTTGCAGATTTCAGGTTCTTCATCAATAAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS CAA 72 bp | CAACCAGTTCTCTGGGGTGTTCCCAACCCTCATAATTaGGTTAACAGTTTCCGTGTGATCGGCACAGATTTT | + |
|
Preference number: 6 (lower is better) Translates to: QPVLWGVPNPHN*VNSFRVIGTDF Trigger: AAAATCTGTGCCGATCACACGGAAACTGTTAACCAAATTATGAGGGTTGGGAACACCCCAGAGAACTGGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 ENSMUST00000191484.2 |
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| CDS CCA 72 bp | GCAAGTCTCACTTGTATTCGAGCAAAGCTCTCATTCTaGCCGTATTTATCTGGAGGAAGTACTTCAATCGCT | + |
|
Preference number: 6 (lower is better) Translates to: ASLTCIRAKLSF*PYLSGGSTSIA Trigger: AGCGATTGAAGTACTTCCTCCAGATAAATACGGCCAGAATGAGAGCTTTGCTCGAATACAAGTGAGACTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 ENSMUST00000191484.2 |
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| CDS CAA 90 bp | CAAGAAATTCAACCAGTTCTCTGGGGTGTTCCCAACCCTCATAATTaGGTTAACAGTTTCCGTGTGATCGGCACAGATTTTAGACAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: QEIQPVLWGVPNPHN*VNSFRVIGTDFRQA Trigger: AGCTTGTCTAAAATCTGTGCCGATCACACGGAAACTGTTAACCAAATTATGAGGGTTGGGAACACCCCAGAGAACTGGTTGAATTTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 ENSMUST00000191484.2 |
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| CDS TCA 72 bp | AGGACCAGACATCACTTCTGGGACTTACCTTGGTCCTaGTTTTCGAATTTTCTCTTGAAGAAGACATGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RTRHHFWDLPWS*FSNFLLKKTCL Trigger: GAGACATGTCTTCTTCAAGAGAAAATTCGAAAATCAGGACCAAGGTAAGTCCCAGAAGTGATGTCTGGTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070326.14 |
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| CDS TCA 72 bp | AGATCTTTTTCCGAAATCTCGGGAAATTCAATCTCATaGGCAGGGTTGATTATGGCGTGCAGTTTAGAGACC | + |
|
Preference number: 6 (lower is better) Translates to: RSFSEISGNSIS*AGLIMACSLET Trigger: GGTCTCTAAACTGCACGCCATAATCAACCCTGCTCATGAGATTGAATTTCCCGAGATTTCGGAAAAAGATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS CCA 72 bp | GTGCAGTTTAGAGACCTGATTGATGATGTGCTGAAATaGCGTCCTCCCATAAGTCATGTAGTACAAAATGCA | + |
|
Preference number: 6 (lower is better) Translates to: VQFRDLIDDVLK*RPPISHVVQNA Trigger: TGCATTTTGTACTACATGACTTATGGGAGGACGCCATTTCAGCACATCATCAATCAGGTCTCTAAACTGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070326.14 |
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| CDS TCA 72 bp | TTCAAGATGGAGTTAGGAGAATTCAGACCAACAAGTTaGCCCAACACATATTTCATTTCATCAGTGGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: FKMELGEFRPTS*PNTYFISSVAP Trigger: GGGAGCCACTGATGAAATGAAATATGTGTTGGGTCAACTTGTTGGTCTGAATTCTCCTAACTCCATCTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS GCA 72 bp | ACTATGAACAATACCATGCTGATGGATTATGTGTACTaGCTCCAACATGTTTTTCCAGTAGCTCTTGCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: TMNNTMLMDYVY*LQHVFPVALAF Trigger: GAACGCAAGAGCTACTGGAAAAACATGTTGGAGGCAGTACACATAATCCATCAGCATGGTATTGTTCATAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS TCA 72 bp | TGGCCGTATTTATCTGGAGGAAGTACTTCAATCGCTTaGCTATACCGACCAATCAGCTTATTTAAAAGATCG | + |
|
Preference number: 6 (lower is better) Translates to: WPYLSGGSTSIA*LYRPISLFKRS Trigger: CGATCTTTTAAATAAGCTGATTGGTCGGTATAGTCAAGCGATTGAAGTACTTCCTCCAGATAAATACGGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 ENSMUST00000191484.2 |
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| CDS CAA 72 bp | TTTCAAGATGGAGTTAGGAGAATTCAGACCAACAAGTaGACCCAACACATATTTCATTTCATCAGTGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FQDGVRRIQTNK*TQHIFHFISGS Trigger: GGAGCCACTGATGAAATGAAATATGTGTTGGGTCAACTTGTTGGTCTGAATTCTCCTAACTCCATCTTGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS GCA 72 bp | CATTCAATACCTGAAACACCTTACTGGAACCTCCACTaGCTATCTGCTTTAATATGGAATAAATTCTTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: HSIPETPYWNLH*LSALIWNKFFR Trigger: ACGGAAGAATTTATTCCATATTAAAGCAGATAGGCAGTGGAGGTTCCAGTAAGGTGTTTCAGGTATTGAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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| CDS TCA 72 bp | TCACTTTCTTTCTCTCTTTTTGTCAAAAGTCTTGGATaGCGAAGAATCTTGACCTTCACCACAATTATAACG | + |
|
Preference number: 6 (lower is better) Translates to: SLSFSLFVKSLG*RRILTFTTIIT Trigger: CGTTATAATTGTGGTGAAGGTCAAGATTCTTCGTCATCCAAGACTTTTGACAAAAAGAGAGAAAGAAAGTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070326.14 ENSMUST00000185913.7 |
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