Pregenerated sensors for TTI2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031577Ensembl transcript IDs: ENSMUST00000098842.3, ENSMUST00000209851.2, ENSMUST00000209986.2, ENSMUST00000210129.2
Found 266 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTTGTCAACGTTTGCACTCAGACCAAGGGTGGCTTTGCCATCCCTaGGGAGGCGGCTTTGCTGTTGGAGTCTGGGGCCTGGGGTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: SCQRLHSDQGWLCHP*GGGFAVGVWGLGSL Trigger: CAGGGACCCCAGGCCCCAGACTCCAACAGCAAAGCCGCCTCCTCAGGGATGGCAAAGCCACCCTTGGTCTGAGTGCAAACGTTGACAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| 3UTR GCA 90 bp | GCACTCAGACCAAGGGTGGCTTTGCCATCCCTGAGGAGGCGGCTTTaGTGTTGGAGTCTGGGGCCTGGGGTCCCTGGTATATATAGTCAT | + |
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Preference number: 1 (lower is better) Translates to: ALRPRVALPSLRRRL*CWSLGPGVPGIYSH Trigger: ATGACTATATATACCAGGGACCCCAGGCCCCAGACTCCAACAGCAAAGCCGCCTCCTCAGGGATGGCAAAGCCACCCTTGGTCTGAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| 3UTR GCA 90 bp | CTCAGGACCTACACTTGGGAGTCAGCTCTTCCCAACAGGTCCATCTaGAGTCCTCAGCGTTTGCCGCTCTGTTCTGTCCTTCTAAGGAAC | + |
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Preference number: 1 (lower is better) Translates to: LRTYTWESALPNRSI*SPQRLPLCSVLLRN Trigger: GTTCCTTAGAAGGACAGAACAGAGCGGCAAACGCTGAGGACTGCAGATGGACCTGTTGGGAAGAGCTGACTCCCAAGTGTAGGTCCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
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| 3UTR TCA 90 bp | GTGGGTCTGAACACAGGAGCAAAGGAACAAACGCATGGTTTGTTTTaGACCAGCTGCGCAATGAGGGGCGTAGGAGAAGGCTTGCACTTT | + |
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Preference number: 1 (lower is better) Translates to: VGLNTGAKEQTHGLF*TSCAMRGVGEGLHF Trigger: AAAGTGCAAGCCTTCTCCTACGCCCCTCATTGCGCAGCTGGTTCAAAACAAACCATGCGTTTGTTCCTTTGCTCCTGTGTTCAGACCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
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| 3UTR TCA 90 bp | TGCCCAGAGCATAATCTATCAGGCCATCTCACAGATAGTGACAGTTaGGTTGAGCCGAGCTTCAATGGTCCTCAGGACCTACACTTGGGA | + |
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Preference number: 1 (lower is better) Translates to: CPEHNLSGHLTDSDS*VEPSFNGPQDLHLG Trigger: TCCCAAGTGTAGGTCCTGAGGACCATTGAAGCTCGGCTCAACTCAACTGTCACTATCTGTGAGATGGCCTGATAGATTATGCTCTGGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
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| 3UTR TCA 90 bp | GAGTATGAACAGGAGACAGAGCCCATGGCCAAAGTCAAAGCCACATaGGTTCCCTTCACACTGGCAGCTGTGCTCTTGTGTGTTCTGTTT | + |
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Preference number: 1 (lower is better) Translates to: EYEQETEPMAKVKAT*VPFTLAAVLLCVLF Trigger: AAACAGAACACACAAGAGCACAGCTGCCAGTGTGAAGGGAACTCATGTGGCTTTGACTTTGGCCATGGGCTCTGTCTCCTGTTCATACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
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| 3UTR GCA 90 bp | CAAGTAACCTGGGTGGCTTGGTTCCTAAGGATGGTGATGGTAATATaGATGGAGAAGGCCTGCTCTTCCAGCTTTGCCCAGAGCATAATC | + |
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Preference number: 1 (lower is better) Translates to: QVTWVAWFLRMVMVI*MEKACSSSFAQSII Trigger: GATTATGCTCTGGGCAAAGCTGGAAGAGCAGGCCTTCTCCATGCATATTACCATCACCATCCTTAGGAACCAAGCCACCCAGGTTACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
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| 3UTR CCA 90 bp | CAGAGCCCATGGCCAAAGTCAAAGCCACATGAGTTCCCTTCACACTaGCAGCTGTGCTCTTGTGTGTTCTGTTTCCTAAAGTATTTATAT | + |
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Preference number: 1 (lower is better) Translates to: QSPWPKSKPHEFPSH*QLCSCVFCFLKYLY Trigger: ATATAAATACTTTAGGAAACAGAACACACAAGAGCACAGCTGCCAGTGTGAAGGGAACTCATGTGGCTTTGACTTTGGCCATGGGCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
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| 3UTR TCA 90 bp | TCTTACTTGGCCCCTGATTGTAGAGCAGAGGAACTTGGAAAGGTGTaGTACTCAGGCATAGTTAAAGGTGGTCTGTGTTTCTTCTTCAGT | + |
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Preference number: 1 (lower is better) Translates to: SYLAPDCRAEELGKV*YSGIVKGGLCFFFS Trigger: ACTGAAGAAGAAACACAGACCACCTTTAACTATGCCTGAGTATCACACCTTTCCAAGTTCCTCTGCTCTACAATCAGGGGCCAAGTAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 |
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| 3UTR TCA 90 bp | TCAAATGTACTATTTCATCGGTGTCTAAGACAGCTTCTTGCTCTGTaGCCTAAACTGGCCTGGGATTACAGGTGTGTATCACCACACACT | + |
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Preference number: 1 (lower is better) Translates to: SNVLFHRCLRQLLAL*PKLAWDYRCVSPHT Trigger: AGTGTGTGGTGATACACACCTGTAATCCCAGGCCAGTTTAGGTCACAGAGCAAGAAGCTGTCTTAGACACCGATGAAATAGTACATTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
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| 3UTR CCA 90 bp | TGTATGTGTACAGGCTGGAAAGTGAGTCCTGATGGAGTAATGGTTTaGTCTTTTCTTACAGGAAAAAGCATTAATAGCTGCCCAGCTGGA | + |
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Preference number: 1 (lower is better) Translates to: CMCTGWKVSPDGVMV*SFLTGKSINSCPAG Trigger: TCCAGCTGGGCAGCTATTAATGCTTTTTCCTGTAAGAAAAGACCAAACCATTACTCCATCAGGACTCACTTTCCAGCCTGTACACATACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| 3UTR TCA 90 bp | CTTACAGGAAAAAGCATTAATAGCTGCCCAGCTGGACAATGCTATTaGGAAGGAATTGCTGGAGAGACTGAAACAAGATACGGTGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: LTGKSINSCPAGQCY*EGIAGETETRYGEK Trigger: TTTCTCACCGTATCTTGTTTCAGTCTCTCCAGCAATTCCTTCTCAATAGCATTGTCCAGCTGGGCAGCTATTAATGCTTTTTCCTGTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| 3UTR GCA 90 bp | TGTAACAAAACAGAAAACTGGATACATGTTGATCTCAGATTAAGCTaGTCTCAAGTAACCTGGGTGGCTTGGTTCCTAAGGATGGTGATG | + |
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Preference number: 1 (lower is better) Translates to: CNKTENWIHVDLRLS*SQVTWVAWFLRMVM Trigger: CATCACCATCCTTAGGAACCAAGCCACCCAGGTTACTTGAGAGCAGCTTAATCTGAGATCAACATGTATCCAGTTTTCTGTTTTGTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
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| 3UTR CCA 90 bp | CACGTCATACCCTTATTAAACATAGGGGACTGTATGTGTACAGGCTaGAAAGTGAGTCCTGATGGAGTAATGGTTTGGTCTTTTCTTACA | + |
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Preference number: 1 (lower is better) Translates to: HVIPLLNIGDCMCTG*KVSPDGVMVWSFLT Trigger: TGTAAGAAAAGACCAAACCATTACTCCATCAGGACTCACTTTCCAGCCTGTACACATACAGTCCCCTATGTTTAATAAGGGTATGACGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| 3UTR TCA 90 bp | GCCTGTCTTCCTGATGAGACTTTCCTCTTGGCTGTTATCTCTAGTTaGTCTTTCCAAGTTGTGTATAAAAGCATCCTAACAGTCATAGGT | + |
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Preference number: 1 (lower is better) Translates to: ACLPDETFLLAVISS*SFQVVYKSILTVIG Trigger: ACCTATGACTGTTAGGATGCTTTTATACACAACTTGGAAAGATCAACTAGAGATAACAGCCAAGAGGAAAGTCTCATCAGGAAGACAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| 3UTR TCA 90 bp | CTGGAGAGACTGAAACAAGATACGGTGAGAAACCTAGTAGTGTTGTaGCAAGTGTTTTCTTACCTGCTAGGAAATACGAAAAGTGCAGTA | + |
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Preference number: 1 (lower is better) Translates to: LERLKQDTVRNLVVL*QVFSYLLGNTKSAV Trigger: TACTGCACTTTTCGTATTTCCTAGCAGGTAAGAAAACACTTGTCACAACACTACTAGGTTTCTCACCGTATCTTGTTTCAGTCTCTCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| 3UTR CCA 90 bp | GGGTTCGATTGTGAGATTGCATTTGTTTGTAACAAAACAGAAAACTaGATACATGTTGATCTCAGATTAAGCTGCTCTCAAGTAACCTGG | + |
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Preference number: 1 (lower is better) Translates to: GFDCEIAFVCNKTEN*IHVDLRLSCSQVTW Trigger: CCAGGTTACTTGAGAGCAGCTTAATCTGAGATCAACATGTATCCAGTTTTCTGTTTTGTTACAAACAAATGCAATCTCACAATCGAACCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
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| 3UTR-3UTR CCA 90 bp | AGCCTTTGCACCCCAGTTTGTCCACAGAGTAAAGCAAGTCTGTGTGTAGGCCTGAGGCGGCTTTGCTGTTaGAGTCTGGGGCCTGGGGTC | + |
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Preference number: 2 (lower is better) Translates to: SLCTPVCPQSKASLCVGLRRLCC*SLGPGV Trigger: GACCCCAGGCCCCAGACTCCAACAGCAAAGCCGCCT...CAGGCCTACACACAGACTTGCTTTACTCTGTGGACAAACTGGGGTGCAAAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| 3UTR-3UTR TCA 90 bp | GTCAACGTTTGCACTCAGACCAAGGGTGGCTTTGCCATCCCTGAGGAGGCGGCTAGAATTCATATGTGGTaGGCTCTGCCCCAGCCTCAA | + |
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Preference number: 2 (lower is better) Translates to: VNVCTQTKGGFAIPEEAARIHMW*ALPQPQ Trigger: TTGAGGCTGGGGCAGAGCTCACCACATATGAATTCT...AGCCGCCTCCTCAGGGATGGCAAAGCCACCCTTGGTCTGAGTGCAAACGTTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTTTCCTGGCTTGAACTCTGTGGGCCAGGATCTTTTCCACAAGCTTCTAGGGAGGCGGCTTTGCTGTTaGAGTCTGGGGCCTGGGGTC | + |
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Preference number: 2 (lower is better) Translates to: IFPGLNSVGQDLFHKLLGRRLCC*SLGPGV Trigger: GACCCCAGGCCCCAGACTCCAACAGCAAAGCCGCCT...CCCTAGAAGCTTGTGGAAAAGATCCTGGCCCACAGAGTTCAAGCCAGGAAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000210129.2 |
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| 3UTR CAA 90 bp | TGGGAGTCAGCTCTTCCCAACAGGTCCATCTGCAGTCCTCAGCGTTaGCCGCTCTGTTCTGTCCTTCTAAGGAACACCTTCCTCCGGAAT | + |
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Preference number: 2 (lower is better) Translates to: WESALPNRSICSPQR*PLCSVLLRNTFLRN Trigger: ATTCCGGAGGAAGGTGTTCCTTAGAAGGACAGAACAGAGCGGCAAACGCTGAGGACTGCAGATGGACCTGTTGGGAAGAGCTGACTCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
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| 3UTR CAA 90 bp | CTTTTCCACAAGCTTCTAGGGCTCCACCTCCCTATGCCTCCTCTCTaGCTATTGGCCCCCTTACAGGTGTATGCCATCACGCCTGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: LFHKLLGLHLPMPPL*LLAPLQVYAITPGF Trigger: AAAACCAGGCGTGATGGCATACACCTGTAAGGGGGCCAATAGCAAGAGAGGAGGCATAGGGAGGTGGAGCCCTAGAAGCTTGTGGAAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000210129.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAACAGGTCCATCTGCAGTCCTCAGCGTTTGCCGCTCTGTTCTGTCCTTCTAAGAATTCATATGTGGTaGGCTCTGCCCCAGCCTCAA | + |
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Preference number: 2 (lower is better) Translates to: PNRSICSPQRLPLCSVLLRIHMW*ALPQPQ Trigger: TTGAGGCTGGGGCAGAGCTCACCACATATGAATTCT...TAGAAGGACAGAACAGAGCGGCAAACGCTGAGGACTGCAGATGGACCTGTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
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| 3UTR-3UTR TCA 90 bp | TTCCACAAGCTTCTAGGGCTCCACCTCCCTATGCCTCCTCTCTTGCTATTGGCCAGAATTCATATGTGGTaGGCTCTGCCCCAGCCTCAA | + |
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Preference number: 2 (lower is better) Translates to: FHKLLGLHLPMPPLLLLARIHMW*ALPQPQ Trigger: TTGAGGCTGGGGCAGAGCTCACCACATATGAATTCT...GGCCAATAGCAAGAGAGGAGGCATAGGGAGGTGGAGCCCTAGAAGCTTGTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000210129.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCTCCTCTCTTGCTATTGGCCCCCTTACAGGTGTATGCCATCACGCCTGGTTCTGCCCCAGCCTCAATaGCTAGAGCTTTTGTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: CLLSCYWPPYRCMPSRLVLPQPQ*LELLFL Trigger: CAGAAACAAAAGCTCTAGGCATTGAGGCTGGGGCAG...AACCAGGCGTGATGGCATACACCTGTAAGGGGGCCAATAGCAAGAGAGGAGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000210129.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCTTTGCACCCCAGTTTGTCCACAGAGTAAAGCAAGTCTGTGTGTAGGCCTGGGCAGAAAGCTGTGCTaGGATGGACTGGGAAGACAA | + |
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Preference number: 2 (lower is better) Translates to: SLCTPVCPQSKASLCVGLGRKLC*DGLGRQ Trigger: TTGTCTTCCCAGTCCATCTCAGCACAGCTTTCTGCC...CAGGCCTACACACAGACTTGCTTTACTCTGTGGACAAACTGGGGTGCAAAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCACAAGCTTCTAGGGCTCCACCTCCCTATGCCTCCTCTCTTGCTATTGGCCCTGGAAAGTGAGTCCTaGTGGAGTAATGGTTTGGTC | + |
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Preference number: 2 (lower is better) Translates to: FHKLLGLHLPMPPLLLLALESES*WSNGLV Trigger: GACCAAACCATTACTCCATCAGGACTCACTTTCCAG...GGCCAATAGCAAGAGAGGAGGCATAGGGAGGTGGAGCCCTAGAAGCTTGTGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000210129.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAACAGGTCCATCTGCAGTCCTCAGCGTTTGCCGCTCTGTTCTGTCCTTCTAGCTCCCAAGAGGCTTTaGGAGAGAAAGAAGTGTATC | + |
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Preference number: 2 (lower is better) Translates to: PNRSICSPQRLPLCSVLLAPKRL*ERKKCI Trigger: GATACACTTCTTTCTCTCTCAAAGCCTCTTGGGAGC...TAGAAGGACAGAACAGAGCGGCAAACGCTGAGGACTGCAGATGGACCTGTTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
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| 3UTR-3UTR GCA 90 bp | GTCAACGTTTGCACTCAGACCAAGGGTGGCTTTGCCATCCCTGAGGAGGCGGCTTCTTGCCTCCAACTGTaGTGTATTACAAGTGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: VNVCTQTKGGFAIPEEAASCLQL*CITSVC Trigger: ACAGACACTTGTAATACAGCACAGTTGGAGGCAAGA...AGCCGCCTCCTCAGGGATGGCAAAGCCACCCTTGGTCTGAGTGCAAACGTTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| 3UTR-3UTR GCA 90 bp | CCCAACAGGTCCATCTGCAGTCCTCAGCGTTTGCCGCTCTGTTCTGTCCTTCTAGAAAAGCAAAAGCCTTaGTGGTATACAACCACGTCA | + |
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Preference number: 2 (lower is better) Translates to: PNRSICSPQRLPLCSVLLEKQKP*WYTTTS Trigger: TGACGTGGTTGTATACCAGCAAGGCTTTTGCTTTTC...TAGAAGGACAGAACAGAGCGGCAAACGCTGAGGACTGCAGATGGACCTGTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
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| 3UTR-3UTR CCA 90 bp | ACTGACAGTGAGGAAGACCAGGATGATGAATCCTCCAATGATGAAGAGGCTCATGAGTTCCCTTCACACTaGCAGCTGTGCTCTTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: TDSEEDQDDESSNDEEAHEFPSH*QLCSCV Trigger: CACACAAGAGCACAGCTGCCAGTGTGAAGGGAACTC...ATGAGCCTCTTCATCATTGGAGGATTCATCATCCTGGTCTTCCTCACTGTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
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| 3UTR CAA 90 bp | TGTGTTTGCACTGCATACATGCATGGCATAGCATGCATGTGGAAGTaGGGTGACAGTCCTCAGGTTCCTTGCATTCTGTTTGAGAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: CVCTAYMHGIACMWK*GDSPQVPCILFERR Trigger: TCTCCTCTCAAACAGAATGCAAGGAACCTGAGGACTGTCACCCAACTTCCACATGCATGCTATGCCATGCATGTATGCAGTGCAAACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000210129.2 |
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| 3UTR-3UTR TCA 90 bp | ATAATCTATCAGGCCATCTCACAGATAGTGACAGTTGAGTTGAGCCGAGCTTCAGGCAGAAAGCTGTGCTaGGATGGACTGGGAAGACAA | + |
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Preference number: 2 (lower is better) Translates to: IIYQAISQIVTVELSRASGRKLC*DGLGRQ Trigger: TTGTCTTCCCAGTCCATCTCAGCACAGCTTTCTGCC...TGAAGCTCGGCTCAACTCAACTGTCACTATCTGTGAGATGGCCTGATAGATTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
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| 3UTR-3UTR TCA 90 bp | TGCCTCCTCTCTTGCTATTGGCCCCCTTACAGGTGTATGCCATCACGCCTGGTTGCTGTTATCTCTAGTTaGTCTTTCCAAGTTGTGTAT | + |
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Preference number: 2 (lower is better) Translates to: CLLSCYWPPYRCMPSRLVAVISS*SFQVVY Trigger: ATACACAACTTGGAAAGATCAACTAGAGATAACAGC...AACCAGGCGTGATGGCATACACCTGTAAGGGGGCCAATAGCAAGAGAGGAGGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000210129.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCTTTGCACCCCAGTTTGTCCACAGAGTAAAGCAAGTCTGTGTGTAGGCCTGGTTTCTTCTTCAGTATaGCGACATCTACAACTTCCC | + |
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Preference number: 2 (lower is better) Translates to: SLCTPVCPQSKASLCVGLVSSSV*RHLQLP Trigger: GGGAAGTTGTAGATGTCGCCATACTGAAGAAGAAAC...CAGGCCTACACACAGACTTGCTTTACTCTGTGGACAAACTGGGGTGCAAAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 |
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| 3UTR-3UTR CCA 90 bp | ATAATCTATCAGGCCATCTCACAGATAGTGACAGTTGAGTTGAGCCGAGCTTCAGCACCTCACTCATTTTaGCACCTTCCCCACTCCCTA | + |
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Preference number: 2 (lower is better) Translates to: IIYQAISQIVTVELSRASAPHSF*HLPHSL Trigger: TAGGGAGTGGGGAAGGTGCCAAAATGAGTGAGGTGC...TGAAGCTCGGCTCAACTCAACTGTCACTATCTGTGAGATGGCCTGATAGATTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
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| 3UTR-3UTR CCA 90 bp | ACAGGCTGGAAAGTGAGTCCTGATGGAGTAATGGTTTGGTCTTTTCTTACAGGAGCACCTCACTCATTTTaGCACCTTCCCCACTCCCTA | + |
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Preference number: 2 (lower is better) Translates to: TGWKVSPDGVMVWSFLTGAPHSF*HLPHSL Trigger: TAGGGAGTGGGGAAGGTGCCAAAATGAGTGAGGTGC...TCCTGTAAGAAAAGACCAAACCATTACTCCATCAGGACTCACTTTCCAGCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| 3UTR-3UTR CCA 90 bp | TGTTTGGCAGCATTTTATTATACAGAGCTGACTCTCAGGGAGACAGGTTATTTCTTTGCTGTTGGAGTCTaGGGCCTGGGGTCCCTGGTA | + |
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Preference number: 2 (lower is better) Translates to: CLAAFYYTELTLRETGYFFAVGV*GLGSLV Trigger: TACCAGGGACCCCAGGCCCCAGACTCCAACAGCAAA...GAAATAACCTGTCTCCCTGAGAGTCAGCTCTGTATAATAAAATGCTGCCAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTCCCAAGAGGCTTTGAGAGAGAAAGAAGTGTATCTGGCTAGAAAAGCAAAAGCACCTCACTCATTTTaGCACCTTCCCCACTCCCTA | + |
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Preference number: 2 (lower is better) Translates to: SSQEALREKEVYLARKAKAPHSF*HLPHSL Trigger: TAGGGAGTGGGGAAGGTGCCAAAATGAGTGAGGTGC...TTTTGCTTTTCTAGCCAGATACACTTCTTTCTCTCTCAAAGCCTCTTGGGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| 3UTR-3UTR CCA 90 bp | TCACAGATAGCCTTTGCACCCCAGTTTGTCCACAGAGTAAAGCAAGTCTGTGTGTCAGACCCTAAATACTaGGAGAGGCTGAACTATGAC | + |
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Preference number: 2 (lower is better) Translates to: SQIAFAPQFVHRVKQVCVSDPKY*ERLNYD Trigger: GTCATAGTTCAGCCTCTCCCAGTATTTAGGGTCTGA...CACACAGACTTGCTTTACTCTGTGGACAAACTGGGGTGCAAAGGCTATCTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| 3UTR-3UTR TCA 90 bp | ATAATCTATCAGGCCATCTCACAGATAGTGACAGTTGAGTTGAGCCGAGCTTCATCCTTGCATTCTGTTTaGGAGGAGATCTTTCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: IIYQAISQIVTVELSRASSLHSV*EEIFPG Trigger: GCCAGGAAAGATCTCCTCTCAAACAGAATGCAAGGA...TGAAGCTCGGCTCAACTCAACTGTCACTATCTGTGAGATGGCCTGATAGATTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
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| 3UTR-3UTR TCA 90 bp | AATGATGAAGAGGCTCATAAGGCTAAGCACAAAGGCAAAGCACCCTTGAAAGGAAAAGTCAAAGCCACATaGGTTCCCTTCACACTGGCA | + |
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Preference number: 2 (lower is better) Translates to: NDEEAHKAKHKGKAPLKGKVKAT*VPFTLA Trigger: TGCCAGTGTGAAGGGAACTCATGTGGCTTTGACTTT...TCCTTTCAAGGGTGCTTTGCCTTTGTGCTTAGCCTTATGAGCCTCTTCATCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
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| 3UTR-3UTR GCA 90 bp | CTCACTCATCACGTGAAACTTTCTGTCTCAAATGTACTATTTCATCGGTGTCTAGGCTCCACCTCCCTATaGCTCCTCTCTTGCTATTGG | + |
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Preference number: 2 (lower is better) Translates to: LTHHVKLSVSNVLFHRCLGSTSL*LLSCYW Trigger: CCAATAGCAAGAGAGGAGGCATAGGGAGGTGGAGCC...TAGACACCGATGAAATAGTACATTTGAGACAGAAAGTTTCACGTGATGAGTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
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| 3UTR-3UTR CCA 90 bp | CCTGGTATATATAGTCATTCAGCACCTCACTCATTTTGGCACCTTCCCCACTCCGTTTCTTCTTCAGTATaGCGACATCTACAACTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: PGIYSHSAPHSFWHLPHSVSSSV*RHLQLP Trigger: GGGAAGTTGTAGATGTCGCCATACTGAAGAAGAAAC...GGAGTGGGGAAGGTGCCAAAATGAGTGAGGTGCTGAATGACTATATATACCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTTGGATGTTTGGCAGCATTTTATTATACAGAGCTGACTCTCAGGGAGACAGGCACTGTTCTCTTACTTaGCCCCTGATTGTAGAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: SWMFGSILLYRADSQGDRHCSLT*PLIVEQ Trigger: CTGCTCTACAATCAGGGGCCAAGTAAGAGAACAGTG...CCTGTCTCCCTGAGAGTCAGCTCTGTATAATAAAATGCTGCCAAACATCCAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTTGGATGTTTGGCAGCATTTTATTATACAGAGCTGACTCTCAGGGAGACAGGTGTTGGTGTTGGACCTaGGAATTCATATGTGGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: SWMFGSILLYRADSQGDRCWCWT*EFICGE Trigger: CTCACCACATATGAATTCTCAGGTCCAACACCAACA...CCTGTCTCCCTGAGAGTCAGCTCTGTATAATAAAATGCTGCCAAACATCCAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTTTGGCAGCATTTTATTATACAGAGCTGACTCTCAGGGAGACAGGTTATTTCCTGCCCCAGCCTCAATaGCTAGAGCTTTTGTTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: CLAAFYYTELTLRETGYFLPQPQ*LELLFL Trigger: CAGAAACAAAAGCTCTAGGCATTGAGGCTGGGGCAG...GAAATAACCTGTCTCCCTGAGAGTCAGCTCTGTATAATAAAATGCTGCCAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGGTTTGGTCTTTTCTTACAGGAAAAAGCATTAATAGCTGCCCAGCTGGACAACATCTTGTCAACGTTTaGACTCAGACCAAGGGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: MVWSFLTGKSINSCPAGQHLVNV*TQTKGG Trigger: GCCACCCTTGGTCTGAGTGCAAACGTTGACAAGATG...TTGTCCAGCTGGGCAGCTATTAATGCTTTTTCCTGTAAGAAAAGACCAAACCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAGTGTATCTGGCTAGAAAAGCAAAAGCCTTGCTGGTATACAACCACGTCATACACTGTTCTCTTACTTaGCCCCTGATTGTAGAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: EVYLARKAKALLVYNHVIHCSLT*PLIVEQ Trigger: CTGCTCTACAATCAGGGGCCAAGTAAGAGAACAGTG...TATGACGTGGTTGTATACCAGCAAGGCTTTTGCTTTTCTAGCCAGATACACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR-3UTR CCA 90 bp | ACATCTATCAAGGGTTTGTTAGAAATTCAGAGTGCTGTTGCTGAAGTCATAAGAGGCACAGACCTGACTTaGGGCAGCAAGGGGATGAAA | + |
|
Preference number: 2 (lower is better) Translates to: TSIKGLLEIQSAVAEVIRGTDLT*GSKGMK Trigger: TTTCATCCCCTTGCTGCCCCAAGTCAGGTCTGTGCC...TCTTATGACTTCAGCAACAGCACTCTGAATTTCTAACAAACCCTTGATAGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000210129.2 |
||
| 3UTR CAA 90 bp | AAAGCATTAATAGCTGCCCAGCTGGACAATGCTATTGAGAAGGAATaGCTGGAGAGACTGAAACAAGATACGGTGAGAAACCTAGTAGTG | + |
|
Preference number: 2 (lower is better) Translates to: KALIAAQLDNAIEKE*LERLKQDTVRNLVV Trigger: CACTACTAGGTTTCTCACCGTATCTTGTTTCAGTCTCTCCAGCAATTCCTTCTCAATAGCATTGTCCAGCTGGGCAGCTATTAATGCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCTCCCAAGAGGCTTTGAGAGAGAAAGAAGTGTATCTGGCTAGAAAAGCAAAATGTTGGTGTTGGACCTaGGAATTCATATGTGGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: SSQEALREKEVYLARKAKCWCWT*EFICGE Trigger: CTCACCACATATGAATTCTCAGGTCCAACACCAACA...TTTTGCTTTTCTAGCCAGATACACTTCTTTCTCTCTCAAAGCCTCTTGGGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAGGCTGGAAAGTGAGTCCTGATGGAGTAATGGTTTGGTCTTTTCTTACAGGAAATACTGGGAGAGGCTaGACTATGACACATTTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: TGWKVSPDGVMVWSFLTGNTGRG*TMTHFL Trigger: GAGAAAATGTGTCATAGTTCAGCCTCTCCCAGTATT...TCCTGTAAGAAAAGACCAAACCATTACTCCATCAGGACTCACTTTCCAGCCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR-3UTR CCA 90 bp | ATAATCTATCAGGCCATCTCACAGATAGTGACAGTTGAGTTGAGCCGAGCTTCAATGAGTATGAATTCTTaGTCCTCTTGCCTCCAACTG | + |
|
Preference number: 2 (lower is better) Translates to: IIYQAISQIVTVELSRASMSMNS*SSCLQL Trigger: CAGTTGGAGGCAAGAGGACCAAGAATTCATACTCAT...TGAAGCTCGGCTCAACTCAACTGTCACTATCTGTGAGATGGCCTGATAGATTAT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
||
| 3UTR-3UTR CCA 90 bp | TTACAGGAAAAAGCATTAATAGCTGCCCAGCTGGACAATGCTATTGAGAAGGAAAAAGCTGTGCTGAGATaGACTGGGAAGACAAAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LQEKALIAAQLDNAIEKEKAVLR*TGKTKL Trigger: CAGCTTTGTCTTCCCAGTCCATCTCAGCACAGCTTT...TTCCTTCTCAATAGCATTGTCCAGCTGGGCAGCTATTAATGCTTTTTCCTGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGGTTTGGTCTTTTCTTACAGGAAAAAGCATTAATAGCTGCCCAGCTGGACAAAAAGCTGTGCTGAGATaGACTGGGAAGACAAAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: MVWSFLTGKSINSCPAGQKAVLR*TGKTKL Trigger: CAGCTTTGTCTTCCCAGTCCATCTCAGCACAGCTTT...TTGTCCAGCTGGGCAGCTATTAATGCTTTTTCCTGTAAGAAAAGACCAAACCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR-3UTR TCA 90 bp | CATGCACCCATTTTTATTCAAGACCAGCTAGTTAGTTTCCACATTTCCTTACTCGCTGGACAATGCTATTaGGAAGGAATTGCTGGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: HAPIFIQDQLVSFHISLLAGQCY*EGIAGE Trigger: CTCTCCAGCAATTCCTTCTCAATAGCATTGTCCAGC...GAGTAAGGAAATGTGGAAACTAACTAGCTGGTCTTGAATAAAAATGGGTGCATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000210129.2 |
||
| 3UTR CAA 90 bp | CTGGCCTTAGATTCAAAAGATGTAGCAAAAGATGAGTATGAATTCTaGGTCCTCTTGCCTCCAACTGTGCTGTATTACAAGTGTCTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: LALDSKDVAKDEYEF*VLLPPTVLYYKCLS Trigger: TGACAGACACTTGTAATACAGCACAGTTGGAGGCAAGAGGACCAAGAATTCATACTCATCTTTTGCTACATCTTTTGAATCTAAGGCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTTTGGCAGCATTTTATTATACAGAGCTGACTCTCAGGGAGACAGGTTATTTCAATACTGGGAGAGGCTaGACTATGACACATTTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: CLAAFYYTELTLRETGYFNTGRG*TMTHFL Trigger: GAGAAAATGTGTCATAGTTCAGCCTCTCCCAGTATT...GAAATAACCTGTCTCCCTGAGAGTCAGCTCTGTATAATAAAATGCTGCCAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTGAGAAACCTAGTAGTGTTGTGACAAGTGTTTTCTTACCTGCTAGGAAATACTCTTGCCTCCAACTGTaGTGTATTACAAGTGTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: GEKPSSVVTSVFLPARKYSCLQL*CITSVC Trigger: ACAGACACTTGTAATACAGCACAGTTGGAGGCAAGA...GTATTTCCTAGCAGGTAAGAAAACACTTGTCACAACACTACTAGGTTTCTCACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAGTGTATCTGGCTAGAAAAGCAAAAGCCTTGCTGGTATACAACCACGTCATAAACAGTCATAGGTTTTaGTCTTCTGGGTTTCGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: EVYLARKAKALLVYNHVINSHRF*SSGFRF Trigger: AAAACGAAACCCAGAAGACCAAAACCTATGACTGTT...TATGACGTGGTTGTATACCAGCAAGGCTTTTGCTTTTCTAGCCAGATACACTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR-3UTR TCA 90 bp | TTACAGGAAAAAGCATTAATAGCTGCCCAGCTGGACAATGCTATTGAGAAGGAAGTTATTTCATACAGCTaGACAAGGGAATGGCTTATA | + |
|
Preference number: 2 (lower is better) Translates to: LQEKALIAAQLDNAIEKEVISYS*TREWLI Trigger: TATAAGCCATTCCCTTGTTCAGCTGTATGAAATAAC...TTCCTTCTCAATAGCATTGTCCAGCTGGGCAGCTATTAATGCTTTTTCCTGTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTAACAAAACAGAAAACTGGATACATGTTGATCTCAGATTAAGCTGCTCTCAATTTATTATACAGAGCTaGCTCTCAGGGAGACAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: CNKTENWIHVDLRLSCSQFIIQS*LSGRQV Trigger: AACCTGTCTCCCTGAGAGTCAGCTCTGTATAATAAA...TTGAGAGCAGCTTAATCTGAGATCAACATGTATCCAGTTTTCTGTTTTGTTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
||
| 3UTR-3UTR CCA 90 bp | GGTGAGAAACCTAGTAGTGTTGTGACAAGTGTTTTCTTACCTGCTAGGAAATACAGTCTCTTGGATGTTTaGCAGCATTTTATTATACAG | + |
|
Preference number: 2 (lower is better) Translates to: GEKPSSVVTSVFLPARKYSLLDV*QHFIIQ Trigger: CTGTATAATAAAATGCTGCCAAACATCCAAGAGACT...GTATTTCCTAGCAGGTAAGAAAACACTTGTCACAACACTACTAGGTTTCTCACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTAACAAAACAGAAAACTGGATACATGTTGATCTCAGATTAAGCTGCTCTCAAGATGGAGTAATGGTTTaGTCTTTTCTTACAGGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: CNKTENWIHVDLRLSCSQDGVMV*SFLTGK Trigger: TTTTCCTGTAAGAAAAGACCAAACCATTACTCCATC...TTGAGAGCAGCTTAATCTGAGATCAACATGTATCCAGTTTTCTGTTTTGTTACA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
||
| 3UTR GCA 72 bp | CCAAGGGTGGCTTTGCCATCCCTGAGGAGGCGGCTTTaGTGTTGGAGTCTGGGGCCTGGGGTCCCTGGTATA | + |
|
Preference number: 3 (lower is better) Translates to: PRVALPSLRRRL*CWSLGPGVPGI Trigger: TATACCAGGGACCCCAGGCCCCAGACTCCAACAGCAAAGCCGCCTCCTCAGGGATGGCAAAGCCACCCTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR CCA 72 bp | GTGGCTTTGCCATCCCTGAGGAGGCGGCTTTGCTGTTaGAGTCTGGGGCCTGGGGTCCCTGGTATATATAGT | + |
|
Preference number: 3 (lower is better) Translates to: VALPSLRRRLCC*SLGPGVPGIYS Trigger: ACTATATATACCAGGGACCCCAGGCCCCAGACTCCAACAGCAAAGCCGCCTCCTCAGGGATGGCAAAGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCCTTTGCACCCCAGTTTGTCCACAGAGTAAAGCAAGTCTGTGTGTAGGCCTGAGGCACAGACCTGACTaGGGGCAGCAAGGGGATGAA | + |
|
Preference number: 3 (lower is better) Translates to: SLCTPVCPQSKASLCVGLRHRPD*GQQGDE Trigger: TTCATCCCCTTGCTGCCCCAAGTCAGGTCTGTGCCT...CAGGCCTACACACAGACTTGCTTTACTCTGTGGACAAACTGGGGTGCAAAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR GCA 72 bp | TACACTTGGGAGTCAGCTCTTCCCAACAGGTCCATCTaGAGTCCTCAGCGTTTGCCGCTCTGTTCTGTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: YTWESALPNRSI*SPQRLPLCSVL Trigger: AAGGACAGAACAGAGCGGCAAACGCTGAGGACTGCAGATGGACCTGTTGGGAAGAGCTGACTCCCAAGTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
||
| 3UTR CCA 72 bp | TTGAGCCGAGCTTCAATGGTCCTCAGGACCTACACTTaGGAGTCAGCTCTTCCCAACAGGTCCATCTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LSRASMVLRTYT*ESALPNRSICS Trigger: ACTGCAGATGGACCTGTTGGGAAGAGCTGACTCCCAAGTGTAGGTCCTGAGGACCATTGAAGCTCGGCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
||
| 3UTR-3UTR CAA 90 bp | CGTCATACCCTTATTAAACATAGGGGACTGTATGTGTACAGGCTGGAAAGTGAGGAGGCGGCTTTGCTGTaGGAGTCTGGGGCCTGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: RHTLIKHRGLYVYRLESEEAALL*ESGAWG Trigger: ACCCCAGGCCCCAGACTCCAACAGCAAAGCCGCCTC...CTCACTTTCCAGCCTGTACACATACAGTCCCCTATGTTTAATAAGGGTATGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR GCA 72 bp | TGGGTGGCTTGGTTCCTAAGGATGGTGATGGTAATATaGATGGAGAAGGCCTGCTCTTCCAGCTTTGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: WVAWFLRMVMVI*MEKACSSSFAQ Trigger: CTGGGCAAAGCTGGAAGAGCAGGCCTTCTCCATGCATATTACCATCACCATCCTTAGGAACCAAGCCACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTTTGGCAGCATTTTATTATACAGAGCTGACTCTCAGGGAGACAGGTTATTTCGAGGCGGCTTTGCTGTaGGAGTCTGGGGCCTGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: CLAAFYYTELTLRETGYFEAALL*ESGAWG Trigger: ACCCCAGGCCCCAGACTCCAACAGCAAAGCCGCCTC...GAAATAACCTGTCTCCCTGAGAGTCAGCTCTGTATAATAAAATGCTGCCAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR TCA 72 bp | AACACAGGAGCAAAGGAACAAACGCATGGTTTGTTTTaGACCAGCTGCGCAATGAGGGGCGTAGGAGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: NTGAKEQTHGLF*TSCAMRGVGEG Trigger: GCCTTCTCCTACGCCCCTCATTGCGCAGCTGGTTCAAAACAAACCATGCGTTTGTTCCTTTGCTCCTGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| 3UTR GCA 72 bp | GCCTCCTCTCTTGCTATTGGCCCCCTTACAGGTGTATaGCATCACGCCTGGTTTTCTACATGTGTTCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: ASSLAIGPLTGV*HHAWFSTCVLR Trigger: TCTCAGAACACATGTAGAAAACCAGGCGTGATGGCATACACCTGTAAGGGGGCCAATAGCAAGAGAGGAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000210129.2 |
||
| 3UTR CCA 72 bp | AGTGGGTCTGAACACAGGAGCAAAGGAACAAACGCATaGTTTGTTTTGAACCAGCTGCGCAATGAGGGGCGT | + |
|
Preference number: 3 (lower is better) Translates to: SGSEHRSKGTNA*FVLNQLRNEGR Trigger: ACGCCCCTCATTGCGCAGCTGGTTCAAAACAAACCATGCGTTTGTTCCTTTGCTCCTGTGTTCAGACCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCCTTTGCACCCCAGTTTGTCCACAGAGTAAAGCAAGTCTGTGTGTAGGCCTGGATGAGTATGAATTCTaGGTCCTCTTGCCTCCAACT | + |
|
Preference number: 3 (lower is better) Translates to: SLCTPVCPQSKASLCVGLDEYEF*VLLPPT Trigger: AGTTGGAGGCAAGAGGACCAAGAATTCATACTCATC...CAGGCCTACACACAGACTTGCTTTACTCTGTGGACAAACTGGGGTGCAAAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR TCA 72 bp | ATGATGTTGGTGTTGGACCTGAGAATTCATATGTGGTaGGCTCTGCCCCAGCCTCAATGCCTAGAGCTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: MMLVLDLRIHMW*ALPQPQCLELL Trigger: CAAAAGCTCTAGGCATTGAGGCTGGGGCAGAGCTCACCACATATGAATTCTCAGGTCCAACACCAACATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR CCA 72 bp | GTTTGCACTGCATACATGCATGGCATAGCATGCATGTaGAAGTTGGGTGACAGTCCTCAGGTTCCTTGCATT | + |
|
Preference number: 3 (lower is better) Translates to: VCTAYMHGIACM*KLGDSPQVPCI Trigger: AATGCAAGGAACCTGAGGACTGTCACCCAACTTCCACATGCATGCTATGCCATGCATGTATGCAGTGCAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000210129.2 |
||
| 3UTR CCA 72 bp | TGGCCAAAGTCAAAGCCACATGAGTTCCCTTCACACTaGCAGCTGTGCTCTTGTGTGTTCTGTTTCCTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: WPKSKPHEFPSH*QLCSCVFCFLK Trigger: CTTTAGGAAACAGAACACACAAGAGCACAGCTGCCAGTGTGAAGGGAACTCATGTGGCTTTGACTTTGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGAATTCATATGTGGTGAGCTCTGCCCCAGCCTCAATGCCTAGAGCTTTTGTTGTAGAGCAGAGGAACTaGGAAAGGTGTGATACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: ENSYVVSSAPASMPRAFVVEQRN*ERCDTQ Trigger: CTGAGTATCACACCTTTCCAAGTTCCTCTGCTCTAC...AACAAAAGCTCTAGGCATTGAGGCTGGGGCAGAGCTCACCACATATGAATTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAGTGTCTGTCACCATGTCCGGTGTGAATGATGTTGGTGTTGGACCTGAGAATTCACTGTTCTCTTACTaGGCCCCTGATTGTAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: QVSVTMSGVNDVGVGPENSLFSY*APDCRA Trigger: TGCTCTACAATCAGGGGCCAAGTAAGAGAACAGTGA...ATTCTCAGGTCCAACACCAACATCATTCACACCGGACATGGTGACAGACACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTGACAGTGAGGAAGACCAGGATGATGAATCCTCCAATGATGAAGAGGCTCATCTGGCAGCTGTGCTCTaGTGTGTTCTGTTTCCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: TDSEEDQDDESSNDEEAHLAAVL*CVLFPK Trigger: TTTAGGAAACAGAACACACAAGAGCACAGCTGCCAG...ATGAGCCTCTTCATCATTGGAGGATTCATCATCCTGGTCTTCCTCACTGTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| 3UTR TCA 72 bp | GCCCCTGATTGTAGAGCAGAGGAACTTGGAAAGGTGTaGTACTCAGGCATAGTTAAAGGTGGTCTGTGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: APDCRAEELGKV*YSGIVKGGLCF Trigger: GAAACACAGACCACCTTTAACTATGCCTGAGTATCACACCTTTCCAAGTTCCTCTGCTCTACAATCAGGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 |
||
| 3UTR TCA 72 bp | CATAATCTATCAGGCCATCTCACAGATAGTGACAGTTaGGTTGAGCCGAGCTTCAATGGTCCTCAGGACCTA | + |
|
Preference number: 3 (lower is better) Translates to: HNLSGHLTDSDS*VEPSFNGPQDL Trigger: TAGGTCCTGAGGACCATTGAAGCTCGGCTCAACTCAACTGTCACTATCTGTGAGATGGCCTGATAGATTATG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
||
| 3UTR GCA 72 bp | CTAAGGATGGTGATGGTAATATGCATGGAGAAGGCCTaGTCTTCCAGCTTTGCCCAGAGCATAATCTATCAG | + |
|
Preference number: 3 (lower is better) Translates to: LRMVMVICMEKA*SSSFAQSIIYQ Trigger: CTGATAGATTATGCTCTGGGCAAAGCTGGAAGAGCAGGCCTTCTCCATGCATATTACCATCACCATCCTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
||
| 3UTR CCA 72 bp | AGGTTCCTTGCATTCTGTTTGAGAGGAGATCTTTCCTaGCTTGAACTCTGTGGGCCAGGATCTTTTCCACAA | + |
|
Preference number: 3 (lower is better) Translates to: RFLAFCLRGDLS*LELCGPGSFPQ Trigger: TTGTGGAAAAGATCCTGGCCCACAGAGTTCAAGCCAGGAAAGATCTCCTCTCAAACAGAATGCAAGGAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000210129.2 |
||
| 3UTR CCA 72 bp | CTCAGATTAAGCTGCTCTCAAGTAACCTGGGTGGCTTaGTTCCTAAGGATGGTGATGGTAATATGCATGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LRLSCSQVTWVA*FLRMVMVICME Trigger: CTCCATGCATATTACCATCACCATCCTTAGGAACCAAGCCACCCAGGTTACTTGAGAGCAGCTTAATCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
||
| 3UTR-3UTR CAA 90 bp | ATAATCTATCAGGCCATCTCACAGATAGTGACAGTTGAGTTGAGCCGAGCTTCACTTCTGGGTTTCGTTTaGTTTTCCCCTGTCCATGCA | + |
|
Preference number: 3 (lower is better) Translates to: IIYQAISQIVTVELSRASLLGFV*FSPVHA Trigger: TGCATGGACAGGGGAAAACAAAACGAAACCCAGAAG...TGAAGCTCGGCTCAACTCAACTGTCACTATCTGTGAGATGGCCTGATAGATTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTGACAGTGAGGAAGACCAGGATGATGAATCCTCCAATGATGAAGAGGCTCATAAAGGCAAAGCACCCTaGAAAGGACCTTTACGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: TDSEEDQDDESSNDEEAHKGKAP*KGPLRK Trigger: TTTCCGTAAAGGTCCTTTCAAGGGTGCTTTGCCTTT...ATGAGCCTCTTCATCATTGGAGGATTCATCATCCTGGTCTTCCTCACTGTCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| 3UTR TCA 72 bp | CTATTTCATCGGTGTCTAAGACAGCTTCTTGCTCTGTaGCCTAAACTGGCCTGGGATTACAGGTGTGTATCA | + |
|
Preference number: 3 (lower is better) Translates to: LFHRCLRQLLAL*PKLAWDYRCVS Trigger: TGATACACACCTGTAATCCCAGGCCAGTTTAGGTCACAGAGCAAGAAGCTGTCTTAGACACCGATGAAATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
||
| 3UTR GCA 72 bp | ATGAGTATGAATTCTTGGTCCTCTTGCCTCCAACTGTaGTGTATTACAAGTGTCTGTCACCATGTCCGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: MSMNSWSSCLQL*CITSVCHHVRC Trigger: ACACCGGACATGGTGACAGACACTTGTAATACAGCACAGTTGGAGGCAAGAGGACCAAGAATTCATACTCAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR-3UTR CAA 90 bp | TCACAGATAGCCTTTGCACCCCAGTTTGTCCACAGAGTAAAGCAAGTCTGTGTGCAATGCCTAGAGCTTTaGTTTCTGTGTAGTTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: SQIAFAPQFVHRVKQVCVQCLEL*FLCSSL Trigger: TAGAGAACTACACAGAAACAAAAGCTCTAGGCATTG...CACACAGACTTGCTTTACTCTGTGGACAAACTGGGGTGCAAAGGCTATCTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGTGTATCTGGCTAGAAAAGCAAAAGCCTTGCTGGTATACAACCACGTCATACTTCTGGGTTTCGTTTaGTTTTCCCCTGTCCATGCA | + |
|
Preference number: 3 (lower is better) Translates to: EVYLARKAKALLVYNHVILLGFV*FSPVHA Trigger: TGCATGGACAGGGGAAAACAAAACGAAACCCAGAAG...TATGACGTGGTTGTATACCAGCAAGGCTTTTGCTTTTCTAGCCAGATACACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAATCTATCAGGCCATCTCACAGATAGTGACAGTTGAGTTGAGCCGAGCTTCAAGCTCCCAAGAGGCTTaGAGAGAGAAAGAAGTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: IIYQAISQIVTVELSRASSSQEA*REKEVY Trigger: ATACACTTCTTTCTCTCTCAAAGCCTCTTGGGAGCT...TGAAGCTCGGCTCAACTCAACTGTCACTATCTGTGAGATGGCCTGATAGATTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
||
| 3UTR TCA 72 bp | GTGGGAATACTTCAGACCCTAAATACTGGGAGAGGCTaGACTATGACACATTTTCTCCACATCTTGTCAACG | + |
|
Preference number: 3 (lower is better) Translates to: VGILQTLNTGRG*TMTHFLHILST Trigger: CGTTGACAAGATGTGGAGAAAATGTGTCATAGTTCAGCCTCTCCCAGTATTTAGGGTCTGAAGTATTCCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR CCA 72 bp | GTGTGTAGGCCTGTCTTCCTGATGAGACTTTCCTCTTaGCTGTTATCTCTAGTTGATCTTTCCAAGTTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: VCRPVFLMRLSS*LLSLVDLSKLC Trigger: ACACAACTTGGAAAGATCAACTAGAGATAACAGCCAAGAGGAAAGTCTCATCAGGAAGACAGGCCTACACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR CCA 72 bp | CCCTTATTAAACATAGGGGACTGTATGTGTACAGGCTaGAAAGTGAGTCCTGATGGAGTAATGGTTTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: PLLNIGDCMCTG*KVSPDGVMVWS Trigger: AGACCAAACCATTACTCCATCAGGACTCACTTTCCAGCCTGTACACATACAGTCCCCTATGTTTAATAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR-3UTR CAA 90 bp | TTACAGGAAAAAGCATTAATAGCTGCCCAGCTGGACAATGCTATTGAGAAGGAAGTAGAGCAGAGGAACTaGGAAAGGTGTGATACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LQEKALIAAQLDNAIEKEVEQRN*ERCDTQ Trigger: CTGAGTATCACACCTTTCCAAGTTCCTCTGCTCTAC...TTCCTTCTCAATAGCATTGTCCAGCTGGGCAGCTATTAATGCTTTTTCCTGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 |
||
| 3UTR CCA 72 bp | TTTGTATGTGTGAACCTTGAGAGTAATAGGTTTTGGTaGCTGTGTGTGCAGACTGACTCACTTTATGGAACG | + |
|
Preference number: 3 (lower is better) Translates to: FVCVNLESNRFW*LCVQTDSLYGT Trigger: CGTTCCATAAAGTGAGTCAGTCTGCACACACAGCCACCAAAACCTATTACTCTCAAGGTTCACACATACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAAGCAAAAGCCTTGCTGGTATACAACCACGTCATACCCTTATTAAACATAGGCTTCTGGGTTTCGTTTaGTTTTCCCCTGTCCATGCA | + |
|
Preference number: 3 (lower is better) Translates to: KSKSLAGIQPRHTLIKHRLLGFV*FSPVHA Trigger: TGCATGGACAGGGGAAAACAAAACGAAACCCAGAAG...CCTATGTTTAATAAGGGTATGACGTGGTTGTATACCAGCAAGGCTTTTGCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCTCCCAAGAGGCTTTGAGAGAGAAAGAAGTGTATCTGGCTAGAAAAGCAAAAGCTATTGAGAAGGAATaGCTGGAGAGACTGAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: SSQEALREKEVYLARKAKAIEKE*LERLKQ Trigger: TTGTTTCAGTCTCTCCAGCAATTCCTTCTCAATAGC...TTTTGCTTTTCTAGCCAGATACACTTCTTTCTCTCTCAAAGCCTCTTGGGAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR TCA 72 bp | AAGACTCAATCTTCAGTACCATTATTCCTAACCCAGTaGCTGTTTCCTTCTAGGATGTGGGGAAAAGAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: KTQSSVPLFLTQ*LFPSRMWGKES Trigger: ACTCTCTTTTCCCCACATCCTAGAAGGAAACAGTCACTGGGTTAGGAATAATGGTACTGAAGATTGAGTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| 3UTR CCA 72 bp | AGTATCTCTAGTGGGAATACTTCAGACCCTAAATACTaGGAGAGGCTGAACTATGACACATTTTCTCCACAT | + |
|
Preference number: 3 (lower is better) Translates to: SISSGNTSDPKY*ERLNYDTFSPH Trigger: ATGTGGAGAAAATGTGTCATAGTTCAGCCTCTCCCAGTATTTAGGGTCTGAAGTATTCCCACTAGAGATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR CCA 72 bp | ACAGGCTGGAAAGTGAGTCCTGATGGAGTAATGGTTTaGTCTTTTCTTACAGGAAAAAGCATTAATAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TGWKVSPDGVMV*SFLTGKSINSC Trigger: GCAGCTATTAATGCTTTTTCCTGTAAGAAAAGACCAAACCATTACTCCATCAGGACTCACTTTCCAGCCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCTTAGATTCAAAAGATGTAGCAAAAGATGAGTATGAATTCTTGGTCCTCTTGTCACTGTTCTCTTACTaGGCCCCTGATTGTAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: ALDSKDVAKDEYEFLVLLSLFSY*APDCRA Trigger: TGCTCTACAATCAGGGGCCAAGTAAGAGAACAGTGA...CAAGAGGACCAAGAATTCATACTCATCTTTTGCTACATCTTTTGAATCTAAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR-3UTR CAA 90 bp | CGTCATACCCTTATTAAACATAGGGGACTGTATGTGTACAGGCTGGAAAGTGAGGAGTCTCTTGGATGTTaGGCAGCATTTTATTATACA | + |
|
Preference number: 3 (lower is better) Translates to: RHTLIKHRGLYVYRLESEESLGC*AAFYYT Trigger: TGTATAATAAAATGCTGCCAAACATCCAAGAGACTC...CTCACTTTCCAGCCTGTACACATACAGTCCCCTATGTTTAATAAGGGTATGACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGCACCCATTTTTATTCAAGACCAGCTAGTTAGTTTCCACATTTCCTTACTCGCTATTGAGAAGGAATaGCTGGAGAGACTGAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: HAPIFIQDQLVSFHISLLAIEKE*LERLKQ Trigger: TTGTTTCAGTCTCTCCAGCAATTCCTTCTCAATAGC...GAGTAAGGAAATGTGGAAACTAACTAGCTGGTCTTGAATAAAAATGGGTGCATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000210129.2 |
||
| 3UTR CCA 72 bp | AACTATAGAAATATAGTTCATCACTGTTCTCTTACTTaGCCCCTGATTGTAGAGCAGAGGAACTTGGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: NYRNIVHHCSLT*PLIVEQRNLER Trigger: CCTTTCCAAGTTCCTCTGCTCTACAATCAGGGGCCAAGTAAGAGAACAGTGATGAACTATATTTCTATAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR TCA 72 bp | CCTGATGAGACTTTCCTCTTGGCTGTTATCTCTAGTTaGTCTTTCCAAGTTGTGTATAAAAGCATCCTAACA | + |
|
Preference number: 3 (lower is better) Translates to: PDETFLLAVISS*SFQVVYKSILT Trigger: TGTTAGGATGCTTTTATACACAACTTGGAAAGATCAACTAGAGATAACAGCCAAGAGGAAAGTCTCATCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR CCA 72 bp | GGTACTCTAAGGTGTTCGAGTATAATAAAAAGAGTATaGACAGCTCTATCTAAAGGTCTTCAGGTCAAAACG | + |
|
Preference number: 3 (lower is better) Translates to: GTLRCSSIIKRV*TALSKGLQVKT Trigger: CGTTTTGACCTGAAGACCTTTAGATAGAGCTGTCCATACTCTTTTTATTATACTCGAACACCTTAGAGTACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
||
| CDS-3UTR GCA 90 bp | AGGAGGCGGCTTTGCTGTTGGAGTCTGGGGCCTGGGGTCCCTGGTATATATAGTCGGGGGAGAGCCCTCTaGAGGCAGGGAGCAGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: RRRLCCWSLGPGVPGIYSRGRAL*RQGAAD Trigger: GTCGGCTGCTCCCTGCCTGCAGAGGGCTCTCCCCCG...ACTATATATACCAGGGACCCCAGGCCCCAGACTCCAACAGCAAAGCCGCCTCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR CAA 72 bp | ACCAAGGGTGGCTTTGCCATCCCTGAGGAGGCGGCTTaGCTGTTGGAGTCTGGGGCCTGGGGTCCCTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TKGGFAIPEEAA*LLESGAWGPWY Trigger: ATACCAGGGACCCCAGGCCCCAGACTCCAACAGCAAAGCCGCCTCCTCAGGGATGGCAAAGCCACCCTTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR TCA 90 bp | AGGAGGCGGCTTTGCTGTTGGAGTCTGGGGCCTGGGGTCCCTGGTATATATAGTTCAGCCAGGGCTGAGTaGCTTGTTGGAGAGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: RRRLCCWSLGPGVPGIYSSARAE*LVGEST Trigger: CGTGGACTCTCCAACAAGTCACTCAGCCCTGGCTGA...ACTATATATACCAGGGACCCCAGGCCCCAGACTCCAACAGCAAAGCCGCCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR CAA 72 bp | CTAGGGCTCCACCTCCCTATGCCTCCTCTCTTGCTATaGGCCCCCTTACAGGTGTATGCCATCACGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LGLHLPMPPLLL*APLQVYAITPG Trigger: ACCAGGCGTGATGGCATACACCTGTAAGGGGGCCAATAGCAAGAGAGGAGGCATAGGGAGGTGGAGCCCTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000210129.2 |
||
| CDS-3UTR TCA 90 bp | TTCCACAAGCTTCTAGGGCTCCACCTCCCTATGCCTCCTCTCTTGCTATTGGCCTCAGCCAGGGCTGAGTaGCTTGTTGGAGAGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: FHKLLGLHLPMPPLLLLASARAE*LVGEST Trigger: CGTGGACTCTCCAACAAGTCACTCAGCCCTGGCTGA...GGCCAATAGCAAGAGAGGAGGCATAGGGAGGTGGAGCCCTAGAAGCTTGTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000210129.2 |
||
| CDS-3UTR TCA 90 bp | TGCCTCCTCTCTTGCTATTGGCCCCCTTACAGGTGTATGCCATCACGCCTGGTTTCAGCCAGGGCTGAGTaGCTTGTTGGAGAGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: CLLSCYWPPYRCMPSRLVSARAE*LVGEST Trigger: CGTGGACTCTCCAACAAGTCACTCAGCCCTGGCTGA...AACCAGGCGTGATGGCATACACCTGTAAGGGGGCCAATAGCAAGAGAGGAGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000210129.2 |
||
| CDS-3UTR GCA 90 bp | GTCAACGTTTGCACTCAGACCAAGGGTGGCTTTGCCATCCCTGAGGAGGCGGCTGTGTCTCCCTTCCAGTaGAGAGCCTTCTCTAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: VNVCTQTKGGFAIPEEAAVSPFQ*RAFSRT Trigger: TGTCCTAGAGAAGGCTCTGCACTGGAAGGGAGACAC...AGCCGCCTCCTCAGGGATGGCAAAGCCACCCTTGGTCTGAGTGCAAACGTTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR CCA 90 bp | GTCAACGTTTGCACTCAGACCAAGGGTGGCTTTGCCATCCCTGAGGAGGCGGCTAGTCGGGAGAACTCTTaGCAGCTTCAACCTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VNVCTQTKGGFAIPEEAASRENS*QLQPSP Trigger: TGGGGAAGGTTGAAGCTGCCAAGAGTTCTCCCGACT...AGCCGCCTCCTCAGGGATGGCAAAGCCACCCTTGGTCTGAGTGCAAACGTTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR GCA 90 bp | AACACATGCTGTAACAGCTTGAGCCCAAGGAATCTAACAGATGAATTCCTGGAGCGGGGGAGAGCCCTCTaGAGGCAGGGAGCAGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: NTCCNSLSPRNLTDEFLERGRAL*RQGAAD Trigger: GTCGGCTGCTCCCTGCCTGCAGAGGGCTCTCCCCCG...CTCCAGGAATTCATCTGTTAGATTCCTTGGGCTCAAGCTGTTACAGCATGTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| CDS-3UTR GCA 90 bp | AGGCGGCTTTGCTGTTGGAGTCTGGGGCCTGGGGTCCCTGGTATATATAGTCATTCCAGCCTCTTCAAGTaGCGGACAGTTAGGATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RRLCCWSLGPGVPGIYSHSSLFK*RTVRIP Trigger: GGGGATCCTAACTGTCCGGCACTTGAAGAGGCTGGA...ATGACTATATATACCAGGGACCCCAGGCCCCAGACTCCAACAGCAAAGCCGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR CCA 90 bp | AGGAGGCGGCTTTGCTGTTGGAGTCTGGGGCCTGGGGTCCCTGGTATATATAGTAGTCGGGAGAACTCTTaGCAGCTTCAACCTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RRRLCCWSLGPGVPGIYSSRENS*QLQPSP Trigger: TGGGGAAGGTTGAAGCTGCCAAGAGTTCTCCCGACT...ACTATATATACCAGGGACCCCAGGCCCCAGACTCCAACAGCAAAGCCGCCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR CCA 90 bp | GGCTTTGCTGTTGGAGTCTGGGGCCTGGGGTCCCTGGTATATATAGTCATTCAGGAGGAGGCGGTGCTCTaGTTCCATGTGCGTGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GFAVGVWGLGSLVYIVIQEEAVL*FHVRED Trigger: ATCCTCACGCACATGGAACCAGAGCACCGCCTCCTC...CTGAATGACTATATATACCAGGGACCCCAGGCCCCAGACTCCAACAGCAAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR CAA 72 bp | AAGCTTCTAGGGCTCCACCTCCCTATGCCTCCTCTCTaGCTATTGGCCCCCTTACAGGTGTATGCCATCACG | + |
|
Preference number: 4 (lower is better) Translates to: KLLGLHLPMPPL*LLAPLQVYAIT Trigger: CGTGATGGCATACACCTGTAAGGGGGCCAATAGCAAGAGAGGAGGCATAGGGAGGTGGAGCCCTAGAAGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000210129.2 |
||
| 3UTR CAA 72 bp | GTTGAGCCGAGCTTCAATGGTCCTCAGGACCTACACTaGGGAGTCAGCTCTTCCCAACAGGTCCATCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VEPSFNGPQDLH*GVSSSQQVHLQ Trigger: CTGCAGATGGACCTGTTGGGAAGAGCTGACTCCCAAGTGTAGGTCCTGAGGACCATTGAAGCTCGGCTCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
||
| CDS-3UTR GCA 90 bp | AGCTCCCAAGAGGCTTTGAGAGAGAAAGAAGTGTATCTGGCTAGAAAAGCAAAACGGGGGAGAGCCCTCTaGAGGCAGGGAGCAGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSQEALREKEVYLARKAKRGRAL*RQGAAD Trigger: GTCGGCTGCTCCCTGCCTGCAGAGGGCTCTCCCCCG...TTTTGCTTTTCTAGCCAGATACACTTCTTTCTCTCTCAAAGCCTCTTGGGAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR CCA 90 bp | GGACCTGAGAATTCATATGTGGTGAGCTCTGCCCCAGCCTCAATGCCTAGAGCTGCGTGGTACAGGACCTaGGCTCTGTTATACTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GPENSYVVSSAPASMPRAAWYRT*ALLYCS Trigger: GCTGCAGTATAACAGAGCCCAGGTCCTGTACCACGC...AGCTCTAGGCATTGAGGCTGGGGCAGAGCTCACCACATATGAATTCTCAGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR TCA 90 bp | GTCAACGTTTGCACTCAGACCAAGGGTGGCTTTGCCATCCCTGAGGAGGCGGCTACGAGAAAACATGTTTaGCAGCAGGATTCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VNVCTQTKGGFAIPEEAATRKHV*QQDSSS Trigger: GGAAGAAGAATCCTGCTGTCAAACATGTTTTCTCGT...AGCCGCCTCCTCAGGGATGGCAAAGCCACCCTTGGTCTGAGTGCAAACGTTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR GCA 90 bp | GGACCTGAGAATTCATATGTGGTGAGCTCTGCCCCAGCCTCAATGCCTAGAGCTTGCAGCTCACCACTGTaGTGTCTTCACAGGATACTG | + |
|
Preference number: 4 (lower is better) Translates to: GPENSYVVSSAPASMPRACSSPL*CLHRIL Trigger: CAGTATCCTGTGAAGACAGCACAGTGGTGAGCTGCA...AGCTCTAGGCATTGAGGCTGGGGCAGAGCTCACCACATATGAATTCTCAGGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR GCA 90 bp | AGCCTTTGCACCCCAGTTTGTCCACAGAGTAAAGCAAGTCTGTGTGTAGGCCTGCAACTTCCCCATCCATaGCTTCGACAAGGCCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLCTPVCPQSKASLCVGLQLPHP*LRQGPS Trigger: TGAAGGGCCTTGTCGAAGGCATGGATGGGGAAGTTG...CAGGCCTACACACAGACTTGCTTTACTCTGTGGACAAACTGGGGTGCAAAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210129.2 |
||
| CDS-3UTR CCA 90 bp | GAGAATTCATATGTGGTGAGCTCTGCCCCAGCCTCAATGCCTAGAGCTTTTGTTGAGGAGGCGGTGCTCTaGTTCCATGTGCGTGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ENSYVVSSAPASMPRAFVEEAVL*FHVRED Trigger: ATCCTCACGCACATGGAACCAGAGCACCGCCTCCTC...AACAAAAGCTCTAGGCATTGAGGCTGGGGCAGAGCTCACCACATATGAATTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR CCA 90 bp | GAGAATTCATATGTGGTGAGCTCTGCCCCAGCCTCAATGCCTAGAGCTTTTGTTTGCCCCTGGGAACAGTaGTCCAGGAGAATCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ENSYVVSSAPASMPRAFVCPWEQ*SRRIRQ Trigger: CTGCCTGATTCTCCTGGACCACTGTTCCCAGGGGCA...AACAAAAGCTCTAGGCATTGAGGCTGGGGCAGAGCTCACCACATATGAATTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR CCA 90 bp | ACTGACAGTGAGGAAGACCAGGATGATGAATCCTCCAATGATGAAGAGGCTCATCCCTTCACCTGCCCCTaGGAACAGTGGTCCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TDSEEDQDDESSNDEEAHPFTCP*EQWSRR Trigger: TCTCCTGGACCACTGTTCCCAGGGGCAGGTGAAGGG...ATGAGCCTCTTCATCATTGGAGGATTCATCATCCTGGTCTTCCTCACTGTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| CDS-3UTR TCA 90 bp | ACTGACAGTGAGGAAGACCAGGATGATGAATCCTCCAATGATGAAGAGGCTCATTCAGCCAGGGCTGAGTaGCTTGTTGGAGAGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: TDSEEDQDDESSNDEEAHSARAE*LVGEST Trigger: CGTGGACTCTCCAACAAGTCACTCAGCCCTGGCTGA...ATGAGCCTCTTCATCATTGGAGGATTCATCATCCTGGTCTTCCTCACTGTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| CDS-3UTR TCA 90 bp | GGCTTTGCTGTTGGAGTCTGGGGCCTGGGGTCCCTGGTATATATAGTCATTCAGAGCTGTAACACTTCATaGCAGTGTGTGGTGACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GFAVGVWGLGSLVYIVIQSCNTS*QCVVTR Trigger: TCGAGTCACCACACACTGTCATGAAGTGTTACAGCT...CTGAATGACTATATATACCAGGGACCCCAGGCCCCAGACTCCAACAGCAAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGTATATATAGTCATTCAGCACCTCACTCATTTTGGCACCTTCCCCACTCCTCCAGCCTCTTCAAGTaGCGGACAGTTAGGATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PGIYSHSAPHSFWHLPHSSSLFK*RTVRIP Trigger: GGGGATCCTAACTGTCCGGCACTTGAAGAGGCTGGA...GGAGTGGGGAAGGTGCCAAAATGAGTGAGGTGCTGAATGACTATATATACCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR GCA 90 bp | TGCCTCCTCTCTTGCTATTGGCCCCCTTACAGGTGTATGCCATCACGCCTGGTTCTGGGCCAAGTATACTaGATGACAAGTTTCAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CLLSCYWPPYRCMPSRLVLGQVY*MTSFRV Trigger: AACCCTGAAACTTGTCATGCAGTATACTTGGCCCAG...AACCAGGCGTGATGGCATACACCTGTAAGGGGGCCAATAGCAAGAGAGGAGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000210129.2 |
||
| CDS-3UTR CCA 90 bp | AGCCTTTGCACCCCAGTTTGTCCACAGAGTAAAGCAAGTCTGTGTGTAGGCCTGGAATCAGGCAGTCTGTaGCTTCCTGGAGCATTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SLCTPVCPQSKASLCVGLESGSL*LPGALY Trigger: GTACAATGCTCCAGGAAGCCACAGACTGCCTGATTC...CAGGCCTACACACAGACTTGCTTTACTCTGTGGACAAACTGGGGTGCAAAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTCACCATGTCCGGTGTGAATGATGTTGGTGTTGGACCTGAGAATTCATATCCCTTCACCTGCCCCTaGGAACAGTGGTCCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SVTMSGVNDVGVGPENSYPFTCP*EQWSRR Trigger: TCTCCTGGACCACTGTTCCCAGGGGCAGGTGAAGGG...ATATGAATTCTCAGGTCCAACACCAACATCATTCACACCGGACATGGTGACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR CAA 72 bp | GAACACAGGAGCAAAGGAACAAACGCATGGTTTGTTTaGAACCAGCTGCGCAATGAGGGGCGTAGGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EHRSKGTNAWFV*NQLRNEGRRRR Trigger: CCTTCTCCTACGCCCCTCATTGCGCAGCTGGTTCAAAACAAACCATGCGTTTGTTCCTTTGCTCCTGTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| CDS-3UTR TCA 90 bp | CAAGTGTCTGTCACCATGTCCGGTGTGAATGATGTTGGTGTTGGACCTGAGAATTCACCAGCAACATGCTaGGATGCTGGACTGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QVSVTMSGVNDVGVGPENSPATC*DAGLVH Trigger: ATGGACCAGTCCAGCATCTCAGCATGTTGCTGGTGA...ATTCTCAGGTCCAACACCAACATCATTCACACCGGACATGGTGACAGACACTTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR TCA 90 bp | GGACCTGAGAATTCATATGTGGTGAGCTCTGCCCCAGCCTCAATGCCTAGAGCTGCCAAGTATACTGCATaGCAAGTTTCAGGGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GPENSYVVSSAPASMPRAAKYTA*QVSGFP Trigger: TGGAAACCCTGAAACTTGTCATGCAGTATACTTGGC...AGCTCTAGGCATTGAGGCTGGGGCAGAGCTCACCACATATGAATTCTCAGGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR GCA 90 bp | ACTGACAGTGAGGAAGACCAGGATGATGAATCCTCCAATGATGAAGAGGCTCATTGGGCTCTGTTATACTaGAGCAAGTCCGCAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TDSEEDQDDESSNDEEAHWALLY*SKSAAG Trigger: GCCAGCTGCGGACTTGCTGCAGTATAACAGAGCCCA...ATGAGCCTCTTCATCATTGGAGGATTCATCATCCTGGTCTTCCTCACTGTCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| CDS-3UTR CCA 90 bp | TCACAGATAGCCTTTGCACCCCAGTTTGTCCACAGAGTAAAGCAAGTCTGTGTGAGTCGGGAGAACTCTTaGCAGCTTCAACCTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQIAFAPQFVHRVKQVCVSRENS*QLQPSP Trigger: TGGGGAAGGTTGAAGCTGCCAAGAGTTCTCCCGACT...CACACAGACTTGCTTTACTCTGTGGACAAACTGGGGTGCAAAGGCTATCTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR CCA 90 bp | ACTGACAGTGAGGAAGACCAGGATGATGAATCCTCCAATGATGAAGAGGCTCATGCGTGGTACAGGACCTaGGCTCTGTTATACTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TDSEEDQDDESSNDEEAHAWYRT*ALLYCS Trigger: GCTGCAGTATAACAGAGCCCAGGTCCTGTACCACGC...ATGAGCCTCTTCATCATTGGAGGATTCATCATCCTGGTCTTCCTCACTGTCAGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| CDS-3UTR CCA 90 bp | TCTTGGATGTTTGGCAGCATTTTATTATACAGAGCTGACTCTCAGGGAGACAGGGAGGAGGCGGTGCTCTaGTTCCATGTGCGTGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SWMFGSILLYRADSQGDREEAVL*FHVRED Trigger: ATCCTCACGCACATGGAACCAGAGCACCGCCTCCTC...CCTGTCTCCCTGAGAGTCAGCTCTGTATAATAAAATGCTGCCAAACATCCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR CCA 90 bp | ATCTTTCCTGGCTTGAACTCTGTGGGCCAGGATCTTTTCCACAAGCTTCTAGGGGAATCAGGCAGTCTGTaGCTTCCTGGAGCATTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: IFPGLNSVGQDLFHKLLGESGSL*LPGALY Trigger: GTACAATGCTCCAGGAAGCCACAGACTGCCTGATTC...CCCTAGAAGCTTGTGGAAAAGATCCTGGCCCACAGAGTTCAAGCCAGGAAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000210129.2 |
||
| CDS-3UTR CCA 90 bp | AATGATGAAGAGGCTCATAAGGCTAAGCACAAAGGCAAAGCACCCTTGAAAGGATGCCCCTGGGAACAGTaGTCCAGGAGAATCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NDEEAHKAKHKGKAPLKGCPWEQ*SRRIRQ Trigger: CTGCCTGATTCTCCTGGACCACTGTTCCCAGGGGCA...TCCTTTCAAGGGTGCTTTGCCTTTGTGCTTAGCCTTATGAGCCTCTTCATCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| CDS-3UTR CCA 90 bp | GAAGTGTATCTGGCTAGAAAAGCAAAAGCCTTGCTGGTATACAACCACGTCATACCCTTCACCTGCCCCTaGGAACAGTGGTCCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EVYLARKAKALLVYNHVIPFTCP*EQWSRR Trigger: TCTCCTGGACCACTGTTCCCAGGGGCAGGTGAAGGG...TATGACGTGGTTGTATACCAGCAAGGCTTTTGCTTTTCTAGCCAGATACACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR CAA 72 bp | AGTTGGGTGACAGTCCTCAGGTTCCTTGCATTCTGTTaGAGAGGAGATCTTTCCTGGCTTGAACTCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SWVTVLRFLAFC*RGDLSWLELCG Trigger: CCCACAGAGTTCAAGCCAGGAAAGATCTCCTCTCAAACAGAATGCAAGGAACCTGAGGACTGTCACCCAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000210129.2 |
||
| CDS-3UTR TCA 90 bp | GGCTTTGCTGTTGGAGTCTGGGGCCTGGGGTCCCTGGTATATATAGTCATTCAGGGCTGCTTCAATCTGTaGGTGATGGCAAAAATATAC | + |
|
Preference number: 4 (lower is better) Translates to: GFAVGVWGLGSLVYIVIQGCFNL*VMAKIY Trigger: GTATATTTTTGCCATCACTCACAGATTGAAGCAGCC...CTGAATGACTATATATACCAGGGACCCCAGGCCCCAGACTCCAACAGCAAAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR GCA 90 bp | ACTGACAGTGAGGAAGACCAGGATGATGAATCCTCCAATGATGAAGAGGCTCATGTGTCTCCCTTCCAGTaGAGAGCCTTCTCTAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: TDSEEDQDDESSNDEEAHVSPFQ*RAFSRT Trigger: TGTCCTAGAGAAGGCTCTGCACTGGAAGGGAGACAC...ATGAGCCTCTTCATCATTGGAGGATTCATCATCCTGGTCTTCCTCACTGTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| CDS-3UTR GCA 90 bp | AACACATGCTGTAACAGCTTGAGCCCAAGGAATCTAACAGATGAATTCCTGGAGTCCAGCCTCTTCAAGTaGCGGACAGTTAGGATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: NTCCNSLSPRNLTDEFLESSLFK*RTVRIP Trigger: GGGGATCCTAACTGTCCGGCACTTGAAGAGGCTGGA...CTCCAGGAATTCATCTGTTAGATTCCTTGGGCTCAAGCTGTTACAGCATGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| CDS-3UTR GCA 90 bp | CTGCCCCAGCCTCAATGCCTAGAGCTTTTGTTTCTGTGTAGTTCTCTAATCTTTATCGCCAGGAGAATCTaGAGAGCCCTGCTGCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPQPQCLELLFLCSSLIFIARRI*RALLHL Trigger: AAGGTGCAGCAGGGCTCTGCAGATTCTCCTGGCGAT...AAAGATTAGAGAACTACACAGAAACAAAAGCTCTAGGCATTGAGGCTGGGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR GCA 90 bp | AATGATGAAGAGGCTCATAAGGCTAAGCACAAAGGCAAAGCACCCTTGAAAGGAATCGCCAGGAGAATCTaGAGAGCCCTGCTGCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: NDEEAHKAKHKGKAPLKGIARRI*RALLHL Trigger: AAGGTGCAGCAGGGCTCTGCAGATTCTCCTGGCGAT...TCCTTTCAAGGGTGCTTTGCCTTTGTGCTTAGCCTTATGAGCCTCTTCATCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| CDS-3UTR CCA 90 bp | ACTGACAGTGAGGAAGACCAGGATGATGAATCCTCCAATGATGAAGAGGCTCATAGTCGGGAGAACTCTTaGCAGCTTCAACCTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TDSEEDQDDESSNDEEAHSRENS*QLQPSP Trigger: TGGGGAAGGTTGAAGCTGCCAAGAGTTCTCCCGACT...ATGAGCCTCTTCATCATTGGAGGATTCATCATCCTGGTCTTCCTCACTGTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| CDS-3UTR CCA 90 bp | AGAAATATAGTTCATCACTGTTCTCTTACTTGGCCCCTGATTGTAGAGCAGAGGTGCCCCTGGGAACAGTaGTCCAGGAGAATCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RNIVHHCSLTWPLIVEQRCPWEQ*SRRIRQ Trigger: CTGCCTGATTCTCCTGGACCACTGTTCCCAGGGGCA...CCTCTGCTCTACAATCAGGGGCCAAGTAAGAGAACAGTGATGAACTATATTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR CAA 72 bp | ATCTATCAGGCCATCTCACAGATAGTGACAGTTGAGTaGAGCCGAGCTTCAATGGTCCTCAGGACCTACACT | + |
|
Preference number: 4 (lower is better) Translates to: IYQAISQIVTVE*SRASMVLRTYT Trigger: AGTGTAGGTCCTGAGGACCATTGAAGCTCGGCTCAACTCAACTGTCACTATCTGTGAGATGGCCTGATAGAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
||
| CDS-3UTR TCA 90 bp | GAGAATTCATATGTGGTGAGCTCTGCCCCAGCCTCAATGCCTAGAGCTTTTGTTTGTCTGATAGTCATCTaGGATGAGCAAAGACGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ENSYVVSSAPASMPRAFVCLIVI*DEQRRR Trigger: CCTCCGTCTTTGCTCATCTCAGATGACTATCAGACA...AACAAAAGCTCTAGGCATTGAGGCTGGGGCAGAGCTCACCACATATGAATTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR TCA 90 bp | AACACATGCTGTAACAGCTTGAGCCCAAGGAATCTAACAGATGAATTCCTGGAGTCAGGCATGTACAGGTaGTTGAAGAGGGCGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: NTCCNSLSPRNLTDEFLESGMYR*LKRAWY Trigger: GTACCACGCCCTCTTCAATCACCTGTACATGCCTGA...CTCCAGGAATTCATCTGTTAGATTCCTTGGGCTCAAGCTGTTACAGCATGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| CDS-3UTR TCA 90 bp | TCACAGATAGCCTTTGCACCCCAGTTTGTCCACAGAGTAAAGCAAGTCTGTGTGAGCTGTAACACTTCATaGCAGTGTGTGGTGACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SQIAFAPQFVHRVKQVCVSCNTS*QCVVTR Trigger: TCGAGTCACCACACACTGTCATGAAGTGTTACAGCT...CACACAGACTTGCTTTACTCTGTGGACAAACTGGGGTGCAAAGGCTATCTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR GCA 90 bp | GAAAACTGGATACATGTTGATCTCAGATTAAGCTGCTCTCAAGTAACCTGGGTGTGGGCTCTGTTATACTaGAGCAAGTCCGCAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ENWIHVDLRLSCSQVTWVWALLY*SKSAAG Trigger: GCCAGCTGCGGACTTGCTGCAGTATAACAGAGCCCA...CACCCAGGTTACTTGAGAGCAGCTTAATCTGAGATCAACATGTATCCAGTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
||
| CDS-3UTR GCA 90 bp | CGTCATACCCTTATTAAACATAGGGGACTGTATGTGTACAGGCTGGAAAGTGAGGTGTCTCCCTTCCAGTaGAGAGCCTTCTCTAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: RHTLIKHRGLYVYRLESEVSPFQ*RAFSRT Trigger: TGTCCTAGAGAAGGCTCTGCACTGGAAGGGAGACAC...CTCACTTTCCAGCCTGTACACATACAGTCCCCTATGTTTAATAAGGGTATGACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR GCA 90 bp | AGCTCCCAAGAGGCTTTGAGAGAGAAAGAAGTGTATCTGGCTAGAAAAGCAAAATCCAGCCTCTTCAAGTaGCGGACAGTTAGGATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSQEALREKEVYLARKAKSSLFK*RTVRIP Trigger: GGGGATCCTAACTGTCCGGCACTTGAAGAGGCTGGA...TTTTGCTTTTCTAGCCAGATACACTTCTTTCTCTCTCAAAGCCTCTTGGGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR CCA 90 bp | AGAAATATAGTTCATCACTGTTCTCTTACTTGGCCCCTGATTGTAGAGCAGAGGGCGTGGTACAGGACCTaGGCTCTGTTATACTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RNIVHHCSLTWPLIVEQRAWYRT*ALLYCS Trigger: GCTGCAGTATAACAGAGCCCAGGTCCTGTACCACGC...CCTCTGCTCTACAATCAGGGGCCAAGTAAGAGAACAGTGATGAACTATATTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR TCA 90 bp | CCTGGTATATATAGTCATTCAGCACCTCACTCATTTTGGCACCTTCCCCACTCCGATAGTCATCTGAGATaGGCAAAGACGGAGGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PGIYSHSAPHSFWHLPHSDSHLR*AKTEEV Trigger: TACTTCCTCCGTCTTTGCTCATCTCAGATGACTATC...GGAGTGGGGAAGGTGCCAAAATGAGTGAGGTGCTGAATGACTATATATACCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR TCA 90 bp | CAAGTGTCTGTCACCATGTCCGGTGTGAATGATGTTGGTGTTGGACCTGAGAATGCCAAGTATACTGCATaGCAAGTTTCAGGGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QVSVTMSGVNDVGVGPENAKYTA*QVSGFP Trigger: TGGAAACCCTGAAACTTGTCATGCAGTATACTTGGC...ATTCTCAGGTCCAACACCAACATCATTCACACCGGACATGGTGACAGACACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR GCA 90 bp | AGCTCCCAAGAGGCTTTGAGAGAGAAAGAAGTGTATCTGGCTAGAAAAGCAAAAGTGTCTCCCTTCCAGTaGAGAGCCTTCTCTAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SSQEALREKEVYLARKAKVSPFQ*RAFSRT Trigger: TGTCCTAGAGAAGGCTCTGCACTGGAAGGGAGACAC...TTTTGCTTTTCTAGCCAGATACACTTCTTTCTCTCTCAAAGCCTCTTGGGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR GCA 90 bp | ACAGGCTGGAAAGTGAGTCCTGATGGAGTAATGGTTTGGTCTTTTCTTACAGGATGCAGCTCACCACTGTaGTGTCTTCACAGGATACTG | + |
|
Preference number: 4 (lower is better) Translates to: TGWKVSPDGVMVWSFLTGCSSPL*CLHRIL Trigger: CAGTATCCTGTGAAGACAGCACAGTGGTGAGCTGCA...TCCTGTAAGAAAAGACCAAACCATTACTCCATCAGGACTCACTTTCCAGCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR GCA 90 bp | AACACATGCTGTAACAGCTTGAGCCCAAGGAATCTAACAGATGAATTCCTGGAGTGCAGCTCACCACTGTaGTGTCTTCACAGGATACTG | + |
|
Preference number: 4 (lower is better) Translates to: NTCCNSLSPRNLTDEFLECSSPL*CLHRIL Trigger: CAGTATCCTGTGAAGACAGCACAGTGGTGAGCTGCA...CTCCAGGAATTCATCTGTTAGATTCCTTGGGCTCAAGCTGTTACAGCATGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| CDS-3UTR GCA 90 bp | CGTCATACCCTTATTAAACATAGGGGACTGTATGTGTACAGGCTGGAAAGTGAGTGCAGCTCACCACTGTaGTGTCTTCACAGGATACTG | + |
|
Preference number: 4 (lower is better) Translates to: RHTLIKHRGLYVYRLESECSSPL*CLHRIL Trigger: CAGTATCCTGTGAAGACAGCACAGTGGTGAGCTGCA...CTCACTTTCCAGCCTGTACACATACAGTCCCCTATGTTTAATAAGGGTATGACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR GCA 90 bp | TGTTTGGCAGCATTTTATTATACAGAGCTGACTCTCAGGGAGACAGGTTATTTCATCGCCAGGAGAATCTaGAGAGCCCTGCTGCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: CLAAFYYTELTLRETGYFIARRI*RALLHL Trigger: AAGGTGCAGCAGGGCTCTGCAGATTCTCCTGGCGAT...GAAATAACCTGTCTCCCTGAGAGTCAGCTCTGTATAATAAAATGCTGCCAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR CCA 90 bp | AATGATGAAGAGGCTCATAAGGCTAAGCACAAAGGCAAAGCACCCTTGAAAGGAGAATCAGGCAGTCTGTaGCTTCCTGGAGCATTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: NDEEAHKAKHKGKAPLKGESGSL*LPGALY Trigger: GTACAATGCTCCAGGAAGCCACAGACTGCCTGATTC...TCCTTTCAAGGGTGCTTTGCCTTTGTGCTTAGCCTTATGAGCCTCTTCATCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| CDS-3UTR TCA 90 bp | AACACATGCTGTAACAGCTTGAGCCCAAGGAATCTAACAGATGAATTCCTGGAGTGTCTGATAGTCATCTaGGATGAGCAAAGACGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NTCCNSLSPRNLTDEFLECLIVI*DEQRRR Trigger: CCTCCGTCTTTGCTCATCTCAGATGACTATCAGACA...CTCCAGGAATTCATCTGTTAGATTCCTTGGGCTCAAGCTGTTACAGCATGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| CDS-3UTR GCA 90 bp | ACTGACAGTGAGGAAGACCAGGATGATGAATCCTCCAATGATGAAGAGGCTCATCTGGGCCAAGTATACTaGATGACAAGTTTCAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TDSEEDQDDESSNDEEAHLGQVY*MTSFRV Trigger: AACCCTGAAACTTGTCATGCAGTATACTTGGCCCAG...ATGAGCCTCTTCATCATTGGAGGATTCATCATCCTGGTCTTCCTCACTGTCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| CDS-3UTR GCA 90 bp | GAGAATTCATATGTGGTGAGCTCTGCCCCAGCCTCAATGCCTAGAGCTTTTGTTGTCTTCACAGGATACTaGAATTTTAGCCAGAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: ENSYVVSSAPASMPRAFVVFTGY*NFSQKT Trigger: GGTCTTCTGGCTAAAATTGCAGTATCCTGTGAAGAC...AACAAAAGCTCTAGGCATTGAGGCTGGGGCAGAGCTCACCACATATGAATTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR GCA 90 bp | CATGCACCCATTTTTATTCAAGACCAGCTAGTTAGTTTCCACATTTCCTTACTCATCGCCAGGAGAATCTaGAGAGCCCTGCTGCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: HAPIFIQDQLVSFHISLLIARRI*RALLHL Trigger: AAGGTGCAGCAGGGCTCTGCAGATTCTCCTGGCGAT...GAGTAAGGAAATGTGGAAACTAACTAGCTGGTCTTGAATAAAAATGGGTGCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000210129.2 |
||
| CDS-3UTR CCA 90 bp | CATGCACCCATTTTTATTCAAGACCAGCTAGTTAGTTTCCACATTTCCTTACTCGCGTGGTACAGGACCTaGGCTCTGTTATACTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HAPIFIQDQLVSFHISLLAWYRT*ALLYCS Trigger: GCTGCAGTATAACAGAGCCCAGGTCCTGTACCACGC...GAGTAAGGAAATGTGGAAACTAACTAGCTGGTCTTGAATAAAAATGGGTGCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000210129.2 |
||
| CDS-3UTR CCA 90 bp | ACACTGGCAGCTGTGCTCTTGTGTGTTCTGTTTCCTAAAGTATTTATATTGTTAGAGGAGGCGGTGCTCTaGTTCCATGTGCGTGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TLAAVLLCVLFPKVFILLEEAVL*FHVRED Trigger: ATCCTCACGCACATGGAACCAGAGCACCGCCTCCTC...TAACAATATAAATACTTTAGGAAACAGAACACACAAGAGCACAGCTGCCAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTAGATTCAAAAGATGTAGCAAAAGATGAGTATGAATTCTTGGTCCTCTTGTGCCCCTGGGAACAGTaGTCCAGGAGAATCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALDSKDVAKDEYEFLVLLCPWEQ*SRRIRQ Trigger: CTGCCTGATTCTCCTGGACCACTGTTCCCAGGGGCA...CAAGAGGACCAAGAATTCATACTCATCTTTTGCTACATCTTTTGAATCTAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR CCA 90 bp | GAAAACTATAGAAATATAGTTCATCACTGTTCTCTTACTTGGCCCCTGATTGTACCCTTCACCTGCCCCTaGGAACAGTGGTCCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ENYRNIVHHCSLTWPLIVPFTCP*EQWSRR Trigger: TCTCCTGGACCACTGTTCCCAGGGGCAGGTGAAGGG...TACAATCAGGGGCCAAGTAAGAGAACAGTGATGAACTATATTTCTATAGTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR CAA 72 bp | GCACCTTCCCCACTCCCTATAGTGTATCTTGTTGTTTaGAGTCCATACCTAATGATATCCCAGACTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: APSPLPIVYLVV*SPYLMISQTGL Trigger: AAGGCCAGTCTGGGATATCATTAGGTATGGACTCAAAACAACAAGATACACTATAGGGAGTGGGGAAGGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR CAA 72 bp | ATAGCTGCCCAGCTGGACAATGCTATTGAGAAGGAATaGCTGGAGAGACTGAAACAAGATACGGTGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: IAAQLDNAIEKE*LERLKQDTVRN Trigger: GTTTCTCACCGTATCTTGTTTCAGTCTCTCCAGCAATTCCTTCTCAATAGCATTGTCCAGCTGGGCAGCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR CAA 72 bp | TCTCAGATTAAGCTGCTCTCAAGTAACCTGGGTGGCTaGGTTCCTAAGGATGGTGATGGTAATATGCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: SQIKLLSSNLGG*VPKDGDGNMHG Trigger: TCCATGCATATTACCATCACCATCCTTAGGAACCAAGCCACCCAGGTTACTTGAGAGCAGCTTAATCTGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
||
| CDS-3UTR TCA 90 bp | CTGCCCCAGCCTCAATGCCTAGAGCTTTTGTTTCTGTGTAGTTCTCTAATCTTTGATAGTCATCTGAGATaGGCAAAGACGGAGGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LPQPQCLELLFLCSSLIFDSHLR*AKTEEV Trigger: TACTTCCTCCGTCTTTGCTCATCTCAGATGACTATC...AAAGATTAGAGAACTACACAGAAACAAAAGCTCTAGGCATTGAGGCTGGGGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR TCA 90 bp | AACACATGCTGTAACAGCTTGAGCCCAAGGAATCTAACAGATGAATTCCTGGAGGATAGTCATCTGAGATaGGCAAAGACGGAGGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: NTCCNSLSPRNLTDEFLEDSHLR*AKTEEV Trigger: TACTTCCTCCGTCTTTGCTCATCTCAGATGACTATC...CTCCAGGAATTCATCTGTTAGATTCCTTGGGCTCAAGCTGTTACAGCATGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| CDS-3UTR TCA 90 bp | AGCTCCCAAGAGGCTTTGAGAGAGAAAGAAGTGTATCTGGCTAGAAAAGCAAAATGTCTGATAGTCATCTaGGATGAGCAAAGACGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSQEALREKEVYLARKAKCLIVI*DEQRRR Trigger: CCTCCGTCTTTGCTCATCTCAGATGACTATCAGACA...TTTTGCTTTTCTAGCCAGATACACTTCTTTCTCTCTCAAAGCCTCTTGGGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR TCA 90 bp | CATGCACCCATTTTTATTCAAGACCAGCTAGTTAGTTTCCACATTTCCTTACTCTCAGGCATGTACAGGTaGTTGAAGAGGGCGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HAPIFIQDQLVSFHISLLSGMYR*LKRAWY Trigger: GTACCACGCCCTCTTCAATCACCTGTACATGCCTGA...GAGTAAGGAAATGTGGAAACTAACTAGCTGGTCTTGAATAAAAATGGGTGCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000210129.2 |
||
| CDS-3UTR TCA 90 bp | AGCTCCCAAGAGGCTTTGAGAGAGAAAGAAGTGTATCTGGCTAGAAAAGCAAAAAGCTGTAACACTTCATaGCAGTGTGTGGTGACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SSQEALREKEVYLARKAKSCNTS*QCVVTR Trigger: TCGAGTCACCACACACTGTCATGAAGTGTTACAGCT...TTTTGCTTTTCTAGCCAGATACACTTCTTTCTCTCTCAAAGCCTCTTGGGAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR TCA 90 bp | AACACATGCTGTAACAGCTTGAGCCCAAGGAATCTAACAGATGAATTCCTGGAGGCCAAGTATACTGCATaGCAAGTTTCAGGGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NTCCNSLSPRNLTDEFLEAKYTA*QVSGFP Trigger: TGGAAACCCTGAAACTTGTCATGCAGTATACTTGGC...CTCCAGGAATTCATCTGTTAGATTCCTTGGGCTCAAGCTGTTACAGCATGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| CDS-3UTR GCA 90 bp | CGTCATACCCTTATTAAACATAGGGGACTGTATGTGTACAGGCTGGAAAGTGAGCTGGGCCAAGTATACTaGATGACAAGTTTCAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RHTLIKHRGLYVYRLESELGQVY*MTSFRV Trigger: AACCCTGAAACTTGTCATGCAGTATACTTGGCCCAG...CTCACTTTCCAGCCTGTACACATACAGTCCCCTATGTTTAATAAGGGTATGACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR TCA 90 bp | CTGCCCCAGCCTCAATGCCTAGAGCTTTTGTTTCTGTGTAGTTCTCTAATCTTTGGCTGCTTCAATCTGTaGGTGATGGCAAAAATATAC | + |
|
Preference number: 4 (lower is better) Translates to: LPQPQCLELLFLCSSLIFGCFNL*VMAKIY Trigger: GTATATTTTTGCCATCACTCACAGATTGAAGCAGCC...AAAGATTAGAGAACTACACAGAAACAAAAGCTCTAGGCATTGAGGCTGGGGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR TCA 90 bp | TCTTGGATGTTTGGCAGCATTTTATTATACAGAGCTGACTCTCAGGGAGACAGGGGCTGCTTCAATCTGTaGGTGATGGCAAAAATATAC | + |
|
Preference number: 4 (lower is better) Translates to: SWMFGSILLYRADSQGDRGCFNL*VMAKIY Trigger: GTATATTTTTGCCATCACTCACAGATTGAAGCAGCC...CCTGTCTCCCTGAGAGTCAGCTCTGTATAATAAAATGCTGCCAAACATCCAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR TCA 90 bp | AATGATGAAGAGGCTCATAAGGCTAAGCACAAAGGCAAAGCACCCTTGAAAGGAACGAGAAAACATGTTTaGCAGCAGGATTCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NDEEAHKAKHKGKAPLKGTRKHV*QQDSSS Trigger: GGAAGAAGAATCCTGCTGTCAAACATGTTTTCTCGT...TCCTTTCAAGGGTGCTTTGCCTTTGTGCTTAGCCTTATGAGCCTCTTCATCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| CDS-3UTR TCA 90 bp | CGTCATACCCTTATTAAACATAGGGGACTGTATGTGTACAGGCTGGAAAGTGAGACGAGAAAACATGTTTaGCAGCAGGATTCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RHTLIKHRGLYVYRLESETRKHV*QQDSSS Trigger: GGAAGAAGAATCCTGCTGTCAAACATGTTTTCTCGT...CTCACTTTCCAGCCTGTACACATACAGTCCCCTATGTTTAATAAGGGTATGACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR TCA 90 bp | GGTGAGAAACCTAGTAGTGTTGTGACAAGTGTTTTCTTACCTGCTAGGAAATACTGTCTGATAGTCATCTaGGATGAGCAAAGACGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GEKPSSVVTSVFLPARKYCLIVI*DEQRRR Trigger: CCTCCGTCTTTGCTCATCTCAGATGACTATCAGACA...GTATTTCCTAGCAGGTAAGAAAACACTTGTCACAACACTACTAGGTTTCTCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR TCA 90 bp | ACATCTATCAAGGGTTTGTTAGAAATTCAGAGTGCTGTTGCTGAAGTCATAAGATCAGGCATGTACAGGTaGTTGAAGAGGGCGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TSIKGLLEIQSAVAEVIRSGMYR*LKRAWY Trigger: GTACCACGCCCTCTTCAATCACCTGTACATGCCTGA...TCTTATGACTTCAGCAACAGCACTCTGAATTTCTAACAAACCCTTGATAGATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000210129.2 |
||
| CDS-3UTR TCA 90 bp | GCCTTAGATTCAAAAGATGTAGCAAAAGATGAGTATGAATTCTTGGTCCTCTTGTCAGGCATGTACAGGTaGTTGAAGAGGGCGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ALDSKDVAKDEYEFLVLLSGMYR*LKRAWY Trigger: GTACCACGCCCTCTTCAATCACCTGTACATGCCTGA...CAAGAGGACCAAGAATTCATACTCATCTTTTGCTACATCTTTTGAATCTAAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR GCA 90 bp | AACACATGCTGTAACAGCTTGAGCCCAAGGAATCTAACAGATGAATTCCTGGAGGTCTTCACAGGATACTaGAATTTTAGCCAGAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: NTCCNSLSPRNLTDEFLEVFTGY*NFSQKT Trigger: GGTCTTCTGGCTAAAATTGCAGTATCCTGTGAAGAC...CTCCAGGAATTCATCTGTTAGATTCCTTGGGCTCAAGCTGTTACAGCATGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| CDS-3UTR TCA 90 bp | ATGGTTTGGTCTTTTCTTACAGGAAAAAGCATTAATAGCTGCCCAGCTGGACAAGATAGTCATCTGAGATaGGCAAAGACGGAGGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: MVWSFLTGKSINSCPAGQDSHLR*AKTEEV Trigger: TACTTCCTCCGTCTTTGCTCATCTCAGATGACTATC...TTGTCCAGCTGGGCAGCTATTAATGCTTTTTCCTGTAAGAAAAGACCAAACCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR CCA 90 bp | AATGATGAAGAGGCTCATAAGGCTAAGCACAAAGGCAAAGCACCCTTGAAAGGACCTAGTTTCATCTTCTaGTTCATCATAAACCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NDEEAHKAKHKGKAPLKGPSFIF*FIINLQ Trigger: CTGGAGGTTTATGATGAACCAGAAGATGAAACTAGG...TCCTTTCAAGGGTGCTTTGCCTTTGTGCTTAGCCTTATGAGCCTCTTCATCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGCTGGAAAGTGAGTCCTGATGGAGTAATGGTTTGGTCTTTTCTTACAGGACCTAGTTTCATCTTCTaGTTCATCATAAACCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGWKVSPDGVMVWSFLTGPSFIF*FIINLQ Trigger: CTGGAGGTTTATGATGAACCAGAAGATGAAACTAGG...TCCTGTAAGAAAAGACCAAACCATTACTCCATCAGGACTCACTTTCCAGCCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR CCA 90 bp | AGCTCCCAAGAGGCTTTGAGAGAGAAAGAAGTGTATCTGGCTAGAAAAGCAAAAGTTTCTTCTTCAGTATaGCGACATCTACAACTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSQEALREKEVYLARKAKVSSSV*RHLQLP Trigger: GGGAAGTTGTAGATGTCGCCATACTGAAGAAGAAAC...TTTTGCTTTTCTAGCCAGATACACTTCTTTCTCTCTCAAAGCCTCTTGGGAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210129.2 |
||
| 3UTR CAA 72 bp | GATGTAGCAAAAGATGAGTATGAATTCTTGGTCCTCTaGCCTCCAACTGTGCTGTATTACAAGTGTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DVAKDEYEFLVL*PPTVLYYKCLS Trigger: TGACAGACACTTGTAATACAGCACAGTTGGAGGCAAGAGGACCAAGAATTCATACTCATCTTTTGCTACATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR TCA 90 bp | TTACAGGAAAAAGCATTAATAGCTGCCCAGCTGGACAATGCTATTGAGAAGGAAACGAGAAAACATGTTTaGCAGCAGGATTCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQEKALIAAQLDNAIEKETRKHV*QQDSSS Trigger: GGAAGAAGAATCCTGCTGTCAAACATGTTTTCTCGT...TTCCTTCTCAATAGCATTGTCCAGCTGGGCAGCTATTAATGCTTTTTCCTGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR TCA 90 bp | ACACTGGCAGCTGTGCTCTTGTGTGTTCTGTTTCCTAAAGTATTTATATTGTTAAGCTGTAACACTTCATaGCAGTGTGTGGTGACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TLAAVLLCVLFPKVFILLSCNTS*QCVVTR Trigger: TCGAGTCACCACACACTGTCATGAAGTGTTACAGCT...TAACAATATAAATACTTTAGGAAACAGAACACACAAGAGCACAGCTGCCAGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| CDS-3UTR GCA 90 bp | CTCACTCATCACGTGAAACTTTCTGTCTCAAATGTACTATTTCATCGGTGTCTACTGGGCCAAGTATACTaGATGACAAGTTTCAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LTHHVKLSVSNVLFHRCLLGQVY*MTSFRV Trigger: AACCCTGAAACTTGTCATGCAGTATACTTGGCCCAG...TAGACACCGATGAAATAGTACATTTGAGACAGAAAGTTTCACGTGATGAGTGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098842.3 |
||
| CDS-3UTR GCA 90 bp | GGTGAGAAACCTAGTAGTGTTGTGACAAGTGTTTTCTTACCTGCTAGGAAATACGTCTTCACAGGATACTaGAATTTTAGCCAGAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: GEKPSSVVTSVFLPARKYVFTGY*NFSQKT Trigger: GGTCTTCTGGCTAAAATTGCAGTATCCTGTGAAGAC...GTATTTCCTAGCAGGTAAGAAAACACTTGTCACAACACTACTAGGTTTCTCACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR GCA 90 bp | AAAAGCAAAAGCCTTGCTGGTATACAACCACGTCATACCCTTATTAAACATAGGGTCTTCACAGGATACTaGAATTTTAGCCAGAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: KSKSLAGIQPRHTLIKHRVFTGY*NFSQKT Trigger: GGTCTTCTGGCTAAAATTGCAGTATCCTGTGAAGAC...CCTATGTTTAATAAGGGTATGACGTGGTTGTATACCAGCAAGGCTTTTGCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR CCA 90 bp | GGTGAGAAACCTAGTAGTGTTGTGACAAGTGTTTTCTTACCTGCTAGGAAATACCCTAGTTTCATCTTCTaGTTCATCATAAACCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GEKPSSVVTSVFLPARKYPSFIF*FIINLQ Trigger: CTGGAGGTTTATGATGAACCAGAAGATGAAACTAGG...GTATTTCCTAGCAGGTAAGAAAACACTTGTCACAACACTACTAGGTTTCTCACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR TCA 90 bp | ACACTGGCAGCTGTGCTCTTGTGTGTTCTGTTTCCTAAAGTATTTATATTGTTAGGCTGCTTCAATCTGTaGGTGATGGCAAAAATATAC | + |
|
Preference number: 4 (lower is better) Translates to: TLAAVLLCVLFPKVFILLGCFNL*VMAKIY Trigger: GTATATTTTTGCCATCACTCACAGATTGAAGCAGCC...TAACAATATAAATACTTTAGGAAACAGAACACACAAGAGCACAGCTGCCAGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| CDS-3UTR TCA 90 bp | GAAAACTATAGAAATATAGTTCATCACTGTTCTCTTACTTGGCCCCTGATTGTAGCCAAGTATACTGCATaGCAAGTTTCAGGGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ENYRNIVHHCSLTWPLIVAKYTA*QVSGFP Trigger: TGGAAACCCTGAAACTTGTCATGCAGTATACTTGGC...TACAATCAGGGGCCAAGTAAGAGAACAGTGATGAACTATATTTCTATAGTTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| 3UTR CAA 72 bp | GATTCAAAAGATGTAGCAAAAGATGAGTATGAATTCTaGGTCCTCTTGCCTCCAACTGTGCTGTATTACAAG | + |
|
Preference number: 4 (lower is better) Translates to: DSKDVAKDEYEF*VLLPPTVLYYK Trigger: CTTGTAATACAGCACAGTTGGAGGCAAGAGGACCAAGAATTCATACTCATCTTTTGCTACATCTTTTGAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR CCA 90 bp | GAAAACTATAGAAATATAGTTCATCACTGTTCTCTTACTTGGCCCCTGATTGTAGTTTCCTTATTCAAATaGGGCTTAAGAAGCCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ENYRNIVHHCSLTWPLIVVSLFK*GLRSPK Trigger: CTTGGGGCTTCTTAAGCCCCATTTGAATAAGGAAAC...TACAATCAGGGGCCAAGTAAGAGAACAGTGATGAACTATATTTCTATAGTTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTAGATTCAAAAGATGTAGCAAAAGATGAGTATGAATTCTTGGTCCTCTTGCCTAGTTTCATCTTCTaGTTCATCATAAACCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALDSKDVAKDEYEFLVLLPSFIF*FIINLQ Trigger: CTGGAGGTTTATGATGAACCAGAAGATGAAACTAGG...CAAGAGGACCAAGAATTCATACTCATCTTTTGCTACATCTTTTGAATCTAAGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS CCA 90 bp | GGACAGTTAGGATCCCCAACCTCTTCACGAAGGCTGGCAGGTGTCTaGCATAGGTCCTCCGTAGGAGGAGGCGGTGCTCTGGTTCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: GQLGSPTSSRRLAGV*HRSSVGGGGALVPC Trigger: ACATGGAACCAGAGCACCGCCTCCTCCTACGGAGGACCTATGCCAGACACCTGCCAGCCTTCGTGAAGAGGTTGGGGATCCTAACTGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS GCA 90 bp | CGACAAGGCCCTTCAGTGTCATCGCCAGGAGAATCTGCAGAGCCCTaGTGCACCTTCCTGATGCAGCTCACCACTGTGCTGTCTTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: RQGPSVSSPGESAEP*CTFLMQLTTVLSSQ Trigger: CTGTGAAGACAGCACAGTGGTGAGCTGCATCAGGAAGGTGCAGCAGGGCTCTGCAGATTCTCCTGGCGATGACACTGAAGGGCCTTGTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210129.2 |
||
| CDS GCA 90 bp | TCCATGCCTTCGACAAGGCCCTTCAGTGTCATCGCCAGGAGAATCTaGAGAGCCCTGCTGCACCTTCCTGATGCAGCTCACCACTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SMPSTRPFSVIARRI*RALLHLPDAAHHCA Trigger: AGCACAGTGGTGAGCTGCATCAGGAAGGTGCAGCAGGGCTCTGCAGATTCTCCTGGCGATGACACTGAAGGGCCTTGTCGAAGGCATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210129.2 |
||
| CDS CCA 90 bp | CCCTGGGAACAGTGGTCCAGGAGAATCAGGCAGTCTGTGGCTTCCTaGAGCATTGTACTCTTAGCGGCCTCGGTTGTGGGGATCGTATCC | + |
|
Preference number: 5 (lower is better) Translates to: PWEQWSRRIRQSVAS*SIVLLAASVVGIVS Trigger: GGATACGATCCCCACAACCGAGGCCGCTAAGAGTACAATGCTCCAGGAAGCCACAGACTGCCTGATTCTCCTGGACCACTGTTCCCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS-3UTR CAA 90 bp | GTCAACGTTTGCACTCAGACCAAGGGTGGCTTTGCCATCCCTGAGGAGGCGGCTAGACGGTTCAGAATCTaGGAGAAGGCTGGTTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VNVCTQTKGGFAIPEEAARRFRI*EKAGSR Trigger: CCTCGAACCAGCCTTCTCCAAGATTCTGAACCGTCT...AGCCGCCTCCTCAGGGATGGCAAAGCCACCCTTGGTCTGAGTGCAAACGTTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS CCA 90 bp | TGTGACGGAGGCCTGTCTTCCACGCAGGGCAGTCGGGAGAACTCTTaGCAGCTTCAACCTTCCCCAACAGCTTTAGAAACAGTGAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: CDGGLSSTQGSRENS*QLQPSPTALETVSQ Trigger: TTGGCTCACTGTTTCTAAAGCTGTTGGGGAAGGTTGAAGCTGCCAAGAGTTCTCCCGACTGCCCTGCGTGGAAGACAGGCCTCCGTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS TCA 90 bp | TGGCTGCTTCAATCTGTGAGTGATGGCAAAAATATACACGGGTCCTaGCATGTGACGGAGGCCTGTCTTCCACGCAGGGCAGTCGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: WLLQSVSDGKNIHGS*HVTEACLPRRAVGR Trigger: TCTCCCGACTGCCCTGCGTGGAAGACAGGCCTCCGTCACATGTCAGGACCCGTGTATATTTTTGCCATCACTCACAGATTGAAGCAGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS TCA 90 bp | CGGTGCTCTGGTTCCATGTGCGTGAGGATCAGCTGTAACACTTCATaGCAGTGTGTGGTGACTCGAGCTGTGTCTCCCTTCCAGTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RCSGSMCVRISCNTS*QCVVTRAVSPFQCR Trigger: TCTGCACTGGAAGGGAGACACAGCTCGAGTCACCACACACTGTCATGAAGTGTTACAGCTGATCCTCACGCACATGGAACCAGAGCACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS CCA 90 bp | TCACAGGATACTGCAATTTTAGCCAGAAGACCCTTCACCTGCCCCTaGGAACAGTGGTCCAGGAGAATCAGGCAGTCTGTGGCTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SQDTAILARRPFTCP*EQWSRRIRQSVASW Trigger: CCAGGAAGCCACAGACTGCCTGATTCTCCTGGACCACTGTTCCCAGGGGCAGGTGAAGGGTCTTCTGGCTAAAATTGCAGTATCCTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS GCA 90 bp | CTGTCTTCACAGGATACTGCAATTTTAGCCAGAAGACCCTTCACCTaGCCCTGGGAACAGTGGTCCAGGAGAATCAGGCAGTCTGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSSQDTAILARRPFT*PWEQWSRRIRQSVA Trigger: AGCCACAGACTGCCTGATTCTCCTGGACCACTGTTCCCAGGGGCAGGTGAAGGGTCTTCTGGCTAAAATTGCAGTATCCTGTGAAGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS GCA 90 bp | CACCTTCCTGATGCAGCTCACCACTGTGCTGTCTTCACAGGATACTaGAATTTTAGCCAGAAGACCCTTCACCTGCCCCTGGGAACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: HLPDAAHHCAVFTGY*NFSQKTLHLPLGTV Trigger: CACTGTTCCCAGGGGCAGGTGAAGGGTCTTCTGGCTAAAATTGCAGTATCCTGTGAAGACAGCACAGTGGTGAGCTGCATCAGGAAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS CCA 90 bp | ACTGCAATTTTAGCCAGAAGACCCTTCACCTGCCCCTGGGAACAGTaGTCCAGGAGAATCAGGCAGTCTGTGGCTTCCTGGAGCATTGTA | + |
|
Preference number: 5 (lower is better) Translates to: TAILARRPFTCPWEQ*SRRIRQSVASWSIV Trigger: TACAATGCTCCAGGAAGCCACAGACTGCCTGATTCTCCTGGACCACTGTTCCCAGGGGCAGGTGAAGGGTCTTCTGGCTAAAATTGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS-3UTR CAA 90 bp | GTCAACGTTTGCACTCAGACCAAGGGTGGCTTTGCCATCCCTGAGGAGGCGGCTATAACCAAGGATAACTaGCTCCAGCCTCTTCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VNVCTQTKGGFAIPEEAAITKDN*LQPLQV Trigger: CACTTGAAGAGGCTGGAGCAAGTTATCCTTGGTTAT...AGCCGCCTCCTCAGGGATGGCAAAGCCACCCTTGGTCTGAGTGCAAACGTTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS TCA 90 bp | CATGCTGAGATGCTGGACTGGTCCATGGCTGCTTCAATCTGTGAGTaGTGGCAAAAATATACACGGGTCCTGACATGTGACGGAGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: HAEMLDWSMAASICE*WQKYTRVLTCDGGL Trigger: CAGGCCTCCGTCACATGTCAGGACCCGTGTATATTTTTGCCATCACTCACAGATTGAAGCAGCCATGGACCAGTCCAGCATCTCAGCATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS CCA 90 bp | AGACAGCACCTCACCAGCAACATGCTGAGATGCTGGACTGGTCCATaGCTGCTTCAATCTGTGAGTGATGGCAAAAATATACACGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RQHLTSNMLRCWTGP*LLQSVSDGKNIHGS Trigger: GGACCCGTGTATATTTTTGCCATCACTCACAGATTGAAGCAGCCATGGACCAGTCCAGCATCTCAGCATGTTGCTGGTGAGGTGCTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
||
| CDS GCA 90 bp | TGTGTTTCTTCTTCAGTATGGCGACATCTACAACTTCCCCATCCATaGCTTCGACAAGGCCCTTCAGTGTCATCGCCAGGAGAATCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: CVSSSVWRHLQLPHP*LRQGPSVSSPGESA Trigger: TGCAGATTCTCCTGGCGATGACACTGAAGGGCCTTGTCGAAGGCATGGATGGGGAAGTTGTAGATGTCGCCATACTGAAGAAGAAACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210129.2 |
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| CDS-3UTR CAA 90 bp | TGCCTCCTCTCTTGCTATTGGCCCCCTTACAGGTGTATGCCATCACGCCTGGTTCACGAGAAAACATGTTaGACAGCAGGATTCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CLLSCYWPPYRCMPSRLVHEKTC*TAGFFF Trigger: GAAGAAGAATCCTGCTGTCAAACATGTTTTCTCGTG...AACCAGGCGTGATGGCATACACCTGTAAGGGGGCCAATAGCAAGAGAGGAGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000210129.2 |
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| CDS-3UTR CAA 90 bp | AACACATGCTGTAACAGCTTGAGCCCAAGGAATCTAACAGATGAATTCCTGGAGAGACGGTTCAGAATCTaGGAGAAGGCTGGTTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NTCCNSLSPRNLTDEFLERRFRI*EKAGSR Trigger: CCTCGAACCAGCCTTCTCCAAGATTCTGAACCGTCT...CTCCAGGAATTCATCTGTTAGATTCCTTGGGCTCAAGCTGTTACAGCATGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
||
| CDS-3UTR CAA 90 bp | GAAGTGTATCTGGCTAGAAAAGCAAAAGCCTTGCTGGTATACAACCACGTCATAAGACGGTTCAGAATCTaGGAGAAGGCTGGTTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: EVYLARKAKALLVYNHVIRRFRI*EKAGSR Trigger: CCTCGAACCAGCCTTCTCCAAGATTCTGAACCGTCT...TATGACGTGGTTGTATACCAGCAAGGCTTTTGCTTTTCTAGCCAGATACACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS-3UTR CAA 90 bp | CATGCACCCATTTTTATTCAAGACCAGCTAGTTAGTTTCCACATTTCCTTACTCCAGTCGGGAGAACTCTaGGCAGCTTCAACCTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: HAPIFIQDQLVSFHISLLQSGEL*AASTFP Trigger: GGGGAAGGTTGAAGCTGCCAAGAGTTCTCCCGACTG...GAGTAAGGAAATGTGGAAACTAACTAGCTGGTCTTGAATAAAAATGGGTGCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098842.3 ENSMUST00000210129.2 |
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| CDS-3UTR CAA 90 bp | TGTTTGGCAGCATTTTATTATACAGAGCTGACTCTCAGGGAGACAGGTTATTTCAGACGGTTCAGAATCTaGGAGAAGGCTGGTTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CLAAFYYTELTLRETGYFRRFRI*EKAGSR Trigger: CCTCGAACCAGCCTTCTCCAAGATTCTGAACCGTCT...GAAATAACCTGTCTCCCTGAGAGTCAGCTCTGTATAATAAAATGCTGCCAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS-3UTR CAA 90 bp | GAGAATTCATATGTGGTGAGCTCTGCCCCAGCCTCAATGCCTAGAGCTTTTGTTCACGAGAAAACATGTTaGACAGCAGGATTCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ENSYVVSSAPASMPRAFVHEKTC*TAGFFF Trigger: GAAGAAGAATCCTGCTGTCAAACATGTTTTCTCGTG...AACAAAAGCTCTAGGCATTGAGGCTGGGGCAGAGCTCACCACATATGAATTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS-3UTR CAA 90 bp | ACTGACAGTGAGGAAGACCAGGATGATGAATCCTCCAATGATGAAGAGGCTCATATAACCAAGGATAACTaGCTCCAGCCTCTTCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TDSEEDQDDESSNDEEAHITKDN*LQPLQV Trigger: CACTTGAAGAGGCTGGAGCAAGTTATCCTTGGTTAT...ATGAGCCTCTTCATCATTGGAGGATTCATCATCCTGGTCTTCCTCACTGTCAGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
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| CDS-3UTR CAA 90 bp | CGTCATACCCTTATTAAACATAGGGGACTGTATGTGTACAGGCTGGAAAGTGAGATAACCAAGGATAACTaGCTCCAGCCTCTTCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RHTLIKHRGLYVYRLESEITKDN*LQPLQV Trigger: CACTTGAAGAGGCTGGAGCAAGTTATCCTTGGTTAT...CTCACTTTCCAGCCTGTACACATACAGTCCCCTATGTTTAATAAGGGTATGACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS TCA 90 bp | ACTGGACACCCAGGATTTTATTCTCTGTCTGATAGTCATCTGAGATaGGCAAAGACGGAGGAAGTATCTTTTCTAGATGCTGATTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TGHPGFYSLSDSHLR*AKTEEVSFLDADSA Trigger: GGCTGAATCAGCATCTAGAAAAGATACTTCCTCCGTCTTTGCTCATCTCAGATGACTATCAGACAGAGAATAAAATCCTGGGTGTCCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS-3UTR CAA 90 bp | AATGATGAAGAGGCTCATAAGGCTAAGCACAAAGGCAAAGCACCCTTGAAAGGACACGAGAAAACATGTTaGACAGCAGGATTCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NDEEAHKAKHKGKAPLKGHEKTC*TAGFFF Trigger: GAAGAAGAATCCTGCTGTCAAACATGTTTTCTCGTG...TCCTTTCAAGGGTGCTTTGCCTTTGTGCTTAGCCTTATGAGCCTCTTCATCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209851.2 |
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| CDS-3UTR CAA 90 bp | TCTTGGATGTTTGGCAGCATTTTATTATACAGAGCTGACTCTCAGGGAGACAGGCACGAGAAAACATGTTaGACAGCAGGATTCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SWMFGSILLYRADSQGDRHEKTC*TAGFFF Trigger: GAAGAAGAATCCTGCTGTCAAACATGTTTTCTCGTG...CCTGTCTCCCTGAGAGTCAGCTCTGTATAATAAAATGCTGCCAAACATCCAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS CCA 90 bp | GACAAGTTTCAGGGTTTCCAGGATCTTCAACCTAGTTTCATCTTCTaGTTCATCATAAACCTCCAGATAACCAAGGATAACTTGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: DKFQGFQDLQPSFIF*FIINLQITKDNLLQ Trigger: CTGGAGCAAGTTATCCTTGGTTATCTGGAGGTTTATGATGAACCAGAAGATGAAACTAGGTTGAAGATCCTGGAAACCCTGAAACTTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS-3UTR CAA 90 bp | GAAAACTATAGAAATATAGTTCATCACTGTTCTCTTACTTGGCCCCTGATTGTAATAACCAAGGATAACTaGCTCCAGCCTCTTCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: ENYRNIVHHCSLTWPLIVITKDN*LQPLQV Trigger: CACTTGAAGAGGCTGGAGCAAGTTATCCTTGGTTAT...TACAATCAGGGGCCAAGTAAGAGAACAGTGATGAACTATATTTCTATAGTTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098842.3 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS GCA 72 bp | GGAGAAGGCTGGTTCGAGGGCCGGGGGAGAGCCCTCTaGAGGCAGGGAGCAGCCGACCCCCGACTTCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GEGWFEGRGRAL*RQGAADPRLLF Trigger: GAAGAGAAGTCGGGGGTCGGCTGCTCCCTGCCTGCAGAGGGCTCTCCCCCGGCCCTCGAACCAGCCTTCTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS CAA 90 bp | CCGCCCTGTCCTGATGACTTTGGGCGGCTGAGACGGTTCAGAATCTaGGAGAAGGCTGGTTCGAGGGCCGGGGGAGAGCCCTCTGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PPCPDDFGRLRRFRI*EKAGSRAGGEPSAG Trigger: GCCTGCAGAGGGCTCTCCCCCGGCCCTCGAACCAGCCTTCTCCAAGATTCTGAACCGTCTCAGCCGCCCAAAGTCATCAGGACAGGGCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS GCA 72 bp | GGGATGCTCTTCGACCCCATCTGCCTTCTCCTCGGGTaGTGCGAACTTCTCCAGGGCTCTCACCACCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: GMLFDPICLLLG*CELLQGSHHLP Trigger: GGGCAGGTGGTGAGAGCCCTGGAGAAGTTCGCAGCACCCGAGGAGAAGGCAGATGGGGTCGAAGAGCATCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS GCA 72 bp | CTTCTCGGGCACTTCGGGATGCTCTTCGACCCCATCTaGCTTCTCCTCGGGTGCTGCGAACTTCTCCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLGHFGMLFDPI*LLLGCCELLQG Trigger: GCCCTGGAGAAGTTCGCAGCACCCGAGGAGAAGGCAGATGGGGTCGAAGAGCATCCCGAAGTGCCCGAGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS CCA 72 bp | GGATCCCCAACCTCTTCACGAAGGCTGGCAGGTGTCTaGCATAGGTCCTCCGTAGGAGGAGGCGGTGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GSPTSSRRLAGV*HRSSVGGGGAL Trigger: CAGAGCACCGCCTCCTCCTACGGAGGACCTATGCCAGACACCTGCCAGCCTTCGTGAAGAGGTTGGGGATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS CAA 72 bp | CCTGATGACTTTGGGCGGCTGAGACGGTTCAGAATCTaGGAGAAGGCTGGTTCGAGGGCCGGGGGAGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PDDFGRLRRFRI*EKAGSRAGGEP Trigger: GGGCTCTCCCCCGGCCCTCGAACCAGCCTTCTCCAAGATTCTGAACCGTCTCAGCCGCCCAAAGTCATCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS GCA 72 bp | GAGCCAACTTCAGTCGCCTTCTCGGGCACTTCGGGATaGTCTTCGACCCCATCTGCCTTCTCCTCGGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: EPTSVAFSGTSG*SSTPSAFSSGA Trigger: AGCACCCGAGGAGAAGGCAGATGGGGTCGAAGAGCATCCCGAAGTGCCCGAGAAGGCGACTGAAGTTGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS GCA 72 bp | TCGACAAGGCCCTTCAGTGTCATCGCCAGGAGAATCTaGAGAGCCCTGCTGCACCTTCCTGATGCAGCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: STRPFSVIARRI*RALLHLPDAAH Trigger: GTGAGCTGCATCAGGAAGGTGCAGCAGGGCTCTGCAGATTCTCCTGGCGATGACACTGAAGGGCCTTGTCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210129.2 |
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| CDS TCA 72 bp | TTCTTGCGCCGCCCTGTCCTGATGACTTTGGGCGGCTaGGACGGTTCAGAATCTTGGAGAAGGCTGGTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: FLRRPVLMTLGG*DGSESWRRLVR Trigger: TCGAACCAGCCTTCTCCAAGATTCTGAACCGTCTCAGCCGCCCAAAGTCATCAGGACAGGGCGGCGCAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS GCA 72 bp | TCAGTGTCATCGCCAGGAGAATCTGCAGAGCCCTGCTaGACCTTCCTGATGCAGCTCACCACTGTGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SVSSPGESAEPC*TFLMQLTTVLS Trigger: AGACAGCACAGTGGTGAGCTGCATCAGGAAGGTGCAGCAGGGCTCTGCAGATTCTCCTGGCGATGACACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS GCA 72 bp | AAGAGGGCGTGGTACAGGACCTGGGCTCTGTTATACTaGAGCAAGTCCGCAGCTGGCACAGTAACCACAATG | + |
|
Preference number: 6 (lower is better) Translates to: KRAWYRTWALLY*SKSAAGTVTTM Trigger: CATTGTGGTTACTGTGCCAGCTGCGGACTTGCTGCAGTATAACAGAGCCCAGGTCCTGTACCACGCCCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS CCA 72 bp | GGCCTGTCTTCCACGCAGGGCAGTCGGGAGAACTCTTaGCAGCTTCAACCTTCCCCAACAGCTTTAGAAACA | + |
|
Preference number: 6 (lower is better) Translates to: GLSSTQGSRENS*QLQPSPTALET Trigger: TGTTTCTAAAGCTGTTGGGGAAGGTTGAAGCTGCCAAGAGTTCTCCCGACTGCCCTGCGTGGAAGACAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS GCA 72 bp | CAGGATACTGCAATTTTAGCCAGAAGACCCTTCACCTaGCCCTGGGAACAGTGGTCCAGGAGAATCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QDTAILARRPFT*PWEQWSRRIRQ Trigger: CTGCCTGATTCTCCTGGACCACTGTTCCCAGGGGCAGGTGAAGGGTCTTCTGGCTAAAATTGCAGTATCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS TCA 72 bp | CAATCTGTGAGTGATGGCAAAAATATACACGGGTCCTaGCATGTGACGGAGGCCTGTCTTCCACGCAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: QSVSDGKNIHGS*HVTEACLPRRA Trigger: TGCCCTGCGTGGAAGACAGGCCTCCGTCACATGTCAGGACCCGTGTATATTTTTGCCATCACTCACAGATTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS TCA 72 bp | GGTTCCATGTGCGTGAGGATCAGCTGTAACACTTCATaGCAGTGTGTGGTGACTCGAGCTGTGTCTCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GSMCVRISCNTS*QCVVTRAVSPF Trigger: GAAGGGAGACACAGCTCGAGTCACCACACACTGTCATGAAGTGTTACAGCTGATCCTCACGCACATGGAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS GCA 72 bp | GATGCAGCTCACCACTGTGCTGTCTTCACAGGATACTaGAATTTTAGCCAGAAGACCCTTCACCTGCCCCTG | + |
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Preference number: 6 (lower is better) Translates to: DAAHHCAVFTGY*NFSQKTLHLPL Trigger: CAGGGGCAGGTGAAGGGTCTTCTGGCTAAAATTGCAGTATCCTGTGAAGACAGCACAGTGGTGAGCTGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS GCA 72 bp | TCTTCAGTATGGCGACATCTACAACTTCCCCATCCATaGCTTCGACAAGGCCCTTCAGTGTCATCGCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SSVWRHLQLPHP*LRQGPSVSSPG Trigger: TCCTGGCGATGACACTGAAGGGCCTTGTCGAAGGCATGGATGGGGAAGTTGTAGATGTCGCCATACTGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210129.2 |
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| CDS TCA 72 bp | TGCAGCAAGTCCGCAGCTGGCACAGTAACCACAATGTaGTGGAGGCACTGGACACCCAGGATTTTATTCTCT | + |
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Preference number: 6 (lower is better) Translates to: CSKSAAGTVTTM*WRHWTPRILFS Trigger: AGAGAATAAAATCCTGGGTGTCCAGTGCCTCCATCACATTGTGGTTACTGTGCCAGCTGCGGACTTGCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS TCA 72 bp | CGGTTGTGGGGATCGTATCCCTCGATATATCACATATaGGTTTCAGGAGAGCCTTCAGTAAGACCACAACTC | + |
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Preference number: 6 (lower is better) Translates to: RLWGSYPSIYHI*VSGEPSVRPQL Trigger: GAGTTGTGGTCTTACTGAAGGCTCTCCTGAAACTCATATGTGATATATCGAGGGATACGATCCCCACAACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS CCA 72 bp | CTCACCAGCAACATGCTGAGATGCTGGACTGGTCCATaGCTGCTTCAATCTGTGAGTGATGGCAAAAATATA | + |
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Preference number: 6 (lower is better) Translates to: LTSNMLRCWTGP*LLQSVSDGKNI Trigger: TATATTTTTGCCATCACTCACAGATTGAAGCAGCCATGGACCAGTCCAGCATCTCAGCATGTTGCTGGTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS CCA 72 bp | CAGGGTTTCCAGGATCTTCAACCTAGTTTCATCTTCTaGTTCATCATAAACCTCCAGATAACCAAGGATAAC | + |
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Preference number: 6 (lower is better) Translates to: QGFQDLQPSFIF*FIINLQITKDN Trigger: GTTATCCTTGGTTATCTGGAGGTTTATGATGAACCAGAAGATGAAACTAGGTTGAAGATCCTGGAAACCCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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| CDS TCA 72 bp | CCAGGATTTTATTCTCTGTCTGATAGTCATCTGAGATaGGCAAAGACGGAGGAAGTATCTTTTCTAGATGCT | + |
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Preference number: 6 (lower is better) Translates to: PGFYSLSDSHLR*AKTEEVSFLDA Trigger: AGCATCTAGAAAAGATACTTCCTCCGTCTTTGCTCATCTCAGATGACTATCAGACAGAGAATAAAATCCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098842.3 ENSMUST00000209851.2 ENSMUST00000209986.2 ENSMUST00000210129.2 |
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