Pregenerated sensors for TTF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033222Ensembl transcript IDs: ENSMUST00000076941.12, ENSMUST00000151697.2
Found 249 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | ACACGGTCTCATTCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTaGCATAAACTGGCCTCTAACTCACAATCCCCACTCAGCCTTTCA | + |
Preference number: 1 (lower is better) Translates to: TRSHSVAQAGLKCTL*HKLASNSQSPLSLS Trigger: TGAAAGGCTGAGTGGGGATTGTGAGTTAGAGGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGAATGAGACCGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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3UTR-3UTR CCA 90 bp | TACAAGACGCAGCCTGCCAGCAGGGAAACAGGACAGAGCCTACATAGGCAAGGTCTCTGTGGCATAAACTaGCCTCTAACTCACAATCCC | + |
Preference number: 2 (lower is better) Translates to: YKTQPASRETGQSLHRQGLCGIN*PLTHNP Trigger: GGGATTGTGAGTTAGAGGCCAGTTTATGCCACAGAG...ACCTTGCCTATGTAGGCTCTGTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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3UTR-3UTR GCA 90 bp | TCTCATTCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCACTCAGCCTTTCAGGTaGTGGGAAGTATGGACTACA | + |
Preference number: 2 (lower is better) Translates to: SHSVAQAGLKCTLWHKLATQPFR*WEVWTT Trigger: TGTAGTCCATACTTCCCAGCACCTGAAAGGCTGAGT...GGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGAATGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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3UTR-3UTR CCA 90 bp | TCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCTCTAACGAAGTATGGACTACATaGCTGCCTTCCAGAGCACTT | + |
Preference number: 2 (lower is better) Translates to: SVAQAGLKCTLWHKLASNEVWTT*LPSRAL Trigger: AAGTGCTCTGGAAGGCAGCCATGTAGTCCATACTTC...GTTAGAGGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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3UTR CAA 90 bp | CAGGTGCTGGGAAGTATGGACTACATGGCTGCCTTCCAGAGCACTTaGTGGTTTGTTTTGAGAAAGAGTCTACAACAGGCCAAAGTGGAC | + |
Preference number: 2 (lower is better) Translates to: QVLGSMDYMAAFQST*WFVLRKSLQQAKVD Trigger: GTCCACTTTGGCCTGTTGTAGACTCTTTCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAGTCCATACTTCCCAGCACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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3UTR-3UTR TCA 90 bp | TACAAGACGCAGCCTGCCAGCAGGGAAACAGGACAGAGCCTACATAGGCAAGGTATTACACAAGCTGACTaGCTAACTGGTTTGTTAACC | + |
Preference number: 2 (lower is better) Translates to: YKTQPASRETGQSLHRQGITQAD*LTGLLT Trigger: GGTTAACAAACCAGTTAGTCAGTCAGCTTGTGTAAT...ACCTTGCCTATGTAGGCTCTGTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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3UTR CAA 90 bp | CTCACTGTTACCCAGGCTAACCTTAGACTCGAGATCCTCTTGCCTTaGCCTACAAAGTGCCAGCATTCTAAGCATGTGTCACTATGCTTG | + |
Preference number: 2 (lower is better) Translates to: LTVTQANLRLEILLP*PTKCQHSKHVSLCL Trigger: CAAGCATAGTGACACATGCTTAGAATGCTGGCACTTTGTAGGCAAAGGCAAGAGGATCTCGAGTCTAAGGTTAGCCTGGGTAACAGTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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3UTR-3UTR GCA 90 bp | GACTCGAGATCCTCTTGCCTTTGCCTACAAAGTGCCAGCATTCTAAGCATGTGTACCTCTCCATCTTCTTaGTGGATTACAGGCATGCAC | + |
Preference number: 2 (lower is better) Translates to: DSRSSCLCLQSASILSMCTSPSS*WITGMH Trigger: GTGCATGCCTGTAATCCAGCAAGAAGATGGAGAGGT...ACACATGCTTAGAATGCTGGCACTTTGTAGGCAAAGGCAAGAGGATCTCGAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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3UTR-3UTR CCA 90 bp | GATGTTGATATATCCCTAAATGAAACCATGATGCACAGGCTAAATGAGAGATGCCATCAGTCCCAAACATaGCAGCACAGGGCTTTGAGG | + |
Preference number: 2 (lower is better) Translates to: DVDISLNETMMHRLNERCHQSQT*QHRALR Trigger: CCTCAAAGCCCTGTGCTGCCATGTTTGGGACTGATG...GCATCTCTCATTTAGCCTGTGCATCATGGTTTCATTTAGGGATATATCAACATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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3UTR-3UTR CCA 90 bp | GATGTTGATATATCCCTAAATGAAACCATGATGCACAGGCTAAATGAGAGATGCCAGCCTTTCAGGTGCTaGGAAGTATGGACTACATGG | + |
Preference number: 2 (lower is better) Translates to: DVDISLNETMMHRLNERCQPFRC*EVWTTW Trigger: CCATGTAGTCCATACTTCCCAGCACCTGAAAGGCTG...GCATCTCTCATTTAGCCTGTGCATCATGGTTTCATTTAGGGATATATCAACATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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3UTR-3UTR GCA 90 bp | GATGTTGATATATCCCTAAATGAAACCATGATGCACAGGCTAAATGAGAGATGCTATGGACTACATGGCTaGCTTCCAGAGCACTTTGTG | + |
Preference number: 2 (lower is better) Translates to: DVDISLNETMMHRLNERCYGLHG*LPEHFV Trigger: CACAAAGTGCTCTGGAAGGCAGCCATGTAGTCCATA...GCATCTCTCATTTAGCCTGTGCATCATGGTTTCATTTAGGGATATATCAACATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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3UTR-3UTR CCA 90 bp | GATGTTGATATATCCCTAAATGAAACCATGATGCACAGGCTAAATGAGAGATGCTACAACAGGCCAAAGTaGACCTCTCCATCTTCTTGC | + |
Preference number: 2 (lower is better) Translates to: DVDISLNETMMHRLNERCYNRPK*TSPSSC Trigger: GCAAGAAGATGGAGAGGTCCACTTTGGCCTGTTGTA...GCATCTCTCATTTAGCCTGTGCATCATGGTTTCATTTAGGGATATATCAACATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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3UTR-3UTR GCA 90 bp | GATGTTGATATATCCCTAAATGAAACCATGATGCACAGGCTAAATGAGAGATGCAGATCCTCTTGCCTTTaGCTACAAAGTGCCAGCATT | + |
Preference number: 2 (lower is better) Translates to: DVDISLNETMMHRLNERCRSSCL*LQSASI Trigger: AATGCTGGCACTTTGTAGGCAAAGGCAAGAGGATCT...GCATCTCTCATTTAGCCTGTGCATCATGGTTTCATTTAGGGATATATCAACATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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3UTR-3UTR TCA 90 bp | GATGTTGATATATCCCTAAATGAAACCATGATGCACAGGCTAAATGAGAGATGCCTTTGTGGTTTGTTTTaGGAAAGAGTCTACAACAGG | + |
Preference number: 2 (lower is better) Translates to: DVDISLNETMMHRLNERCLCGLF*ERVYNR Trigger: CCTGTTGTAGACTCTTTCTCAAAACAAACCACAAAG...GCATCTCTCATTTAGCCTGTGCATCATGGTTTCATTTAGGGATATATCAACATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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3UTR-3UTR GCA 90 bp | AAGGCGTTTATTAAGACCATACCAATGATAACACAATGTGGTACAATGGCAGAAACACAACAGATTAAATaGCACTGGCAACTGAAATGG | + |
Preference number: 2 (lower is better) Translates to: KAFIKTIPMITQCGTMAETQQIK*HWQLKW Trigger: CCATTTCAGTTGCCAGTGGCATTTAATCTGTTGTGT...TTCTGCCATTGTACCACATTGTGTTATCATTGGTATGGTCTTAATAAACGCCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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3UTR TCA 72 bp | TCCGCCATCAGTCCCAAACATGGCAGCACAGGGCTTTaGGGCTGTTTGACAGACAGGGTCTTCCCATGTAAT | + |
Preference number: 3 (lower is better) Translates to: SAISPKHGSTGL*GCLTDRVFPCN Trigger: ATTACATGGGAAGACCCTGTCTGTCAAACAGCCTCAAAGCCCTGTGCTGCCATGTTTGGGACTGATGGCGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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3UTR CCA 72 bp | ACAATCCCCACTCAGCCTTTCAGGTGCTGGGAAGTATaGACTACATGGCTGCCTTCCAGAGCACTTTGTGGT | + |
Preference number: 3 (lower is better) Translates to: TIPTQPFRCWEV*TTWLPSRALCG Trigger: ACCACAAAGTGCTCTGGAAGGCAGCCATGTAGTCCATACTTCCCAGCACCTGAAAGGCTGAGTGGGGATTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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3UTR TCA 72 bp | GTCCCAAACATGGCAGCACAGGGCTTTGAGGCTGTTTaGCAGACAGGGTCTTCCCATGTAATTAAGGCTGCT | + |
Preference number: 3 (lower is better) Translates to: VPNMAAQGFEAV*QTGSSHVIKAA Trigger: AGCAGCCTTAATTACATGGGAAGACCCTGTCTGTCAAACAGCCTCAAAGCCCTGTGCTGCCATGTTTGGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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3UTR CCA 72 bp | CATTCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTaGCATAAACTGGCCTCTAACTCACAATCCCCACTC | + |
Preference number: 3 (lower is better) Translates to: HSVAQAGLKCTL*HKLASNSQSPL Trigger: GAGTGGGGATTGTGAGTTAGAGGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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3UTR TCA 72 bp | ACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTaGGAAAGAGTCTACAACAGGCCAAAGTGGACCTCT | + |
Preference number: 3 (lower is better) Translates to: TWLPSRALCGLF*ERVYNRPKWTS Trigger: AGAGGTCCACTTTGGCCTGTTGTAGACTCTTTCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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3UTR CCA 72 bp | AGTATGGACTACATGGCTGCCTTCCAGAGCACTTTGTaGTTTGTTTTGAGAAAGAGTCTACAACAGGCCAAA | + |
Preference number: 3 (lower is better) Translates to: SMDYMAAFQSTL*FVLRKSLQQAK Trigger: TTTGGCCTGTTGTAGACTCTTTCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAGTCCATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR TCA 90 bp | TACAAGACGCAGCCTGCCAGCAGGGAAACAGGACAGAGCCTACATAGGCAAGGTGAATGGGGGTTCCAGTaGCAGCCCACCGGGCCTGGG | + |
Preference number: 4 (lower is better) Translates to: YKTQPASRETGQSLHRQGEWGFQ*QPTGPG Trigger: CCCAGGCCCGGTGGGCTGTCACTGGAACCCCCATTC...ACCTTGCCTATGTAGGCTCTGTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR GCA 90 bp | CCCCACTCAGCCTTTCAGGTGCTGGGAAGTATGGACTACATGGCTGCCTTCCAGGGGTCTTTGGGAGTCTaGCGCAGGGCAGCCCTGGGA | + |
Preference number: 4 (lower is better) Translates to: PHSAFQVLGSMDYMAAFQGSLGV*RRAALG Trigger: TCCCAGGGCTGCCCTGCGGCAGACTCCCAAAGACCC...CTGGAAGGCAGCCATGTAGTCCATACTTCCCAGCACCTGAAAGGCTGAGTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR GCA 90 bp | GCTTACAAGACGCAGCCTGCCAGCAGGGAAACAGGACAGAGCCTACATAGGCAACTCCACACTGAGGTTTaGTCCTGGGACCTCTCCCTC | + |
Preference number: 4 (lower is better) Translates to: AYKTQPASRETGQSLHRQLHTEV*SWDLSL Trigger: GAGGGAGAGGTCCCAGGAGCAAACCTCAGTGTGGAG...TTGCCTATGTAGGCTCTGTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | TGGTTGGTTACAAAGAGGCTTACAAGACGCAGCCTGCCAGCAGGGAAACAGGACAGAGAGCTTGCAGGCTaGATGAGGGGCCTGGGAAGG | + |
Preference number: 4 (lower is better) Translates to: WLVTKRLTRRSLPAGKQDRELAG*MRGLGR Trigger: CCTTCCCAGGCCCCTCATCCAGCCTGCAAGCTCTCT...GTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTAAGCCTCTTTGTAACCAACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR TCA 90 bp | TCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCTCTAACGTTCATATGGCCTCCTaGGCACTGGCTGGCTCCCTC | + |
Preference number: 4 (lower is better) Translates to: SVAQAGLKCTLWHKLASNVHMAS*ALAGSL Trigger: GAGGGAGCCAGCCAGTGCTCAGGAGGCCATATGAAC...GTTAGAGGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | TCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCTCTAACCGAAGCCGCAGAAGCTaGGACAGGACATGGACGGTG | + |
Preference number: 4 (lower is better) Translates to: SVAQAGLKCTLWHKLASNRSRRS*DRTWTV Trigger: CACCGTCCATGTCCTGTCCCAGCTTCTGCGGCTTCG...GTTAGAGGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | TCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCTCTAACGGGACCCCGGCCTACTaGAAACACCATCATCTTCGC | + |
Preference number: 4 (lower is better) Translates to: SVAQAGLKCTLWHKLASNGTPAY*KHHHLR Trigger: GCGAAGATGATGGTGTTTCCAGTAGGCCGGGGTCCC...GTTAGAGGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | TCTCATTCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCCTCCTGAGCACTGGCTaGCTCCCTCAGGAGTTTCCT | + |
Preference number: 4 (lower is better) Translates to: SHSVAQAGLKCTLWHKLALLSTG*LPQEFP Trigger: AGGAAACTCCTGAGGGAGCCAGCCAGTGCTCAGGAG...GGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGAATGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | TACAAGACGCAGCCTGCCAGCAGGGAAACAGGACAGAGCCTACATAGGCAAGGTCAGGATCCCTCCTTGTaGCTTCTGACTTTCCCTCCA | + |
Preference number: 4 (lower is better) Translates to: YKTQPASRETGQSLHRQGQDPSL*LLTFPP Trigger: TGGAGGGAAAGTCAGAAGCCACAAGGAGGGATCCTG...ACCTTGCCTATGTAGGCTCTGTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | TCTCATTCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCCACCGGGCCTGGGCTTaGAGCTTACACACAGCAATG | + |
Preference number: 4 (lower is better) Translates to: SHSVAQAGLKCTLWHKLAHRAWA*SLHTAM Trigger: CATTGCTGTGTGTAAGCTCCAAGCCCAGGCCCGGTG...GGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGAATGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | CCCCACTCAGCCTTTCAGGTGCTGGGAAGTATGGACTACATGGCTGCCTTCCAGCCAGTGGAATCCAGCTaGTCTTTTGTTCTCCTCAGC | + |
Preference number: 4 (lower is better) Translates to: PHSAFQVLGSMDYMAAFQPVESS*SFVLLS Trigger: GCTGAGGAGAACAAAAGACCAGCTGGATTCCACTGG...CTGGAAGGCAGCCATGTAGTCCATACTTCCCAGCACCTGAAAGGCTGAGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | GACTCGAGATCCTCTTGCCTTTGCCTACAAAGTGCCAGCATTCTAAGCATGTGTGCCGCAGGGCAGCCCTaGGACACACTGGATCCAAAC | + |
Preference number: 4 (lower is better) Translates to: DSRSSCLCLQSASILSMCAAGQP*DTLDPN Trigger: GTTTGGATCCAGTGTGTCCCAGGGCTGCCCTGCGGC...ACACATGCTTAGAATGCTGGCACTTTGTAGGCAAAGGCAAGAGGATCTCGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR TCA 90 bp | TCTCATTCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCTCGACTCTCACTCTCTaGCATGTGAGGACCCTTGGG | + |
Preference number: 4 (lower is better) Translates to: SHSVAQAGLKCTLWHKLASTLTL*HVRTLG Trigger: CCCAAGGGTCCTCACATGTCAGAGAGTGAGAGTCGA...GGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGAATGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR GCA 90 bp | GGAAGTATGGACTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGACCTCTGGGTGACCTGTaGACTAGGGGCCTCCCCGTT | + |
Preference number: 4 (lower is better) Translates to: GSMDYMAAFQSTLWFVLRPLGDL*TRGLPV Trigger: AACGGGGAGGCCCCTAGTGCACAGGTCACCCAGAGG...TCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAGTCCATACTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR GCA 90 bp | TGGTTGGTTACAAAGAGGCTTACAAGACGCAGCCTGCCAGCAGGGAAACAGGACGGGACCTCTCCCTCTTaGTTCGTTGTAGGAATCTCC | + |
Preference number: 4 (lower is better) Translates to: WLVTKRLTRRSLPAGKQDGTSPS*FVVGIS Trigger: GGAGATTCCTACAACGAAGCAAGAGGGAGAGGTCCC...GTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTAAGCCTCTTTGTAACCAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR GCA 90 bp | TACAAGACGCAGCCTGCCAGCAGGGAAACAGGACAGAGCCTACATAGGCAAGGTCTACTACCTGCAGCATaGTGGTCCACTGAGAGACAA | + |
Preference number: 4 (lower is better) Translates to: YKTQPASRETGQSLHRQGLLPAA*WSTERQ Trigger: TTGTCTCTCAGTGGACCAGCATGCTGCAGGTAGTAG...ACCTTGCCTATGTAGGCTCTGTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | TCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCTCTAACTTCTCTCAGAGTCTCTaGCTTGTTCGGGACCCCTCG | + |
Preference number: 4 (lower is better) Translates to: SVAQAGLKCTLWHKLASNFSQSL*LVRDPS Trigger: CGAGGGGTCCCGAACAAGCCAGAGACTCTGAGAGAA...GTTAGAGGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | GCTTACAAGACGCAGCCTGCCAGCAGGGAAACAGGACAGAGCCTACATAGGCAACAGAGGAGTCATTCTTaGAAAGCCACGTCACAGGCT | + |
Preference number: 4 (lower is better) Translates to: AYKTQPASRETGQSLHRQQRSHS*KATSQA Trigger: AGCCTGTGACGTGGCTTTCCAAGAATGACTCCTCTG...TTGCCTATGTAGGCTCTGTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | GTTCTTCCAGACTCAGCTTCCAGGCCATCCAACGCCAAAGCTTCACTGGTTTTAAGCTGGGACAGGACATaGACGGTGCTGGGTCTTTGG | + |
Preference number: 4 (lower is better) Translates to: VLPDSASRPSNAKASLVLSWDRT*TVLGLW Trigger: CCAAAGACCCAGCACCGTCCATGTCCTGTCCCAGCT...TAAAACCAGTGAAGCTTTGGCGTTGGATGGCCTGGAAGCTGAGTCTGGAAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR TCA 90 bp | GACTCGAGATCCTCTTGCCTTTGCCTACAAAGTGCCAGCATTCTAAGCATGTGTGGGAGAGTGAAGCTGTaGCTCAGATGGCTGCTGAGG | + |
Preference number: 4 (lower is better) Translates to: DSRSSCLCLQSASILSMCGRVKL*LRWLLR Trigger: CCTCAGCAGCCATCTGAGTCACAGCTTCACTCTCCC...ACACATGCTTAGAATGCTGGCACTTTGTAGGCAAAGGCAAGAGGATCTCGAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR TCA 90 bp | GTTCTTCCAGACTCAGCTTCCAGGCCATCCAACGCCAAAGCTTCACTGGTTTTACCCTTGGGTATTCCTTaGAGCACCTCTCCATGGCCT | + |
Preference number: 4 (lower is better) Translates to: VLPDSASRPSNAKASLVLPLGIP*STSPWP Trigger: AGGCCATGGAGAGGTGCTTCAAGGAATACCCAAGGG...TAAAACCAGTGAAGCTTTGGCGTTGGATGGCCTGGAAGCTGAGTCTGGAAGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR TCA 90 bp | TCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCTCTAACCAGCAGCAGCTTTGGTaGTGTTGCTCTGCTCTGGTT | + |
Preference number: 4 (lower is better) Translates to: SVAQAGLKCTLWHKLASNQQQLW*CCSALV Trigger: AACCAGAGCAGAGCAACATCACCAAAGCTGCTGCTG...GTTAGAGGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR TCA 90 bp | TGGTTGGTTACAAAGAGGCTTACAAGACGCAGCCTGCCAGCAGGGAAACAGGACGGCTCTTCCAAAGACTaGACTCATCAAATGGGGAGC | + |
Preference number: 4 (lower is better) Translates to: WLVTKRLTRRSLPAGKQDGSSKD*THQMGS Trigger: GCTCCCCATTTGATGAGTTCAGTCTTTGGAAGAGCC...GTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTAAGCCTCTTTGTAACCAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | GTTCTTCCAGACTCAGCTTCCAGGCCATCCAACGCCAAAGCTTCACTGGTTTTAGGTTTCTCGGCTGGCTaGGAGAGTGAAGCTGTGACT | + |
Preference number: 4 (lower is better) Translates to: VLPDSASRPSNAKASLVLGFSAG*ESEAVT Trigger: AGTCACAGCTTCACTCTCCCAGCCAGCCGAGAAACC...TAAAACCAGTGAAGCTTTGGCGTTGGATGGCCTGGAAGCTGAGTCTGGAAGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | TGGTTGGTTACAAAGAGGCTTACAAGACGCAGCCTGCCAGCAGGGAAACAGGACCTCCATGGCCTTGCTTaGAAGCCATTCCTTCAGCTT | + |
Preference number: 4 (lower is better) Translates to: WLVTKRLTRRSLPAGKQDLHGLA*KPFLQL Trigger: AAGCTGAAGGAATGGCTTCCAAGCAAGGCCATGGAG...GTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTAAGCCTCTTTGTAACCAACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | ACAAGCCTCACTTCGAGTAGGATGAAATCTAAGACTCCAGGATCATGGAAAGAGCGCTGTCCTCACTGCTaGAGGTGGCATGGTGGGCCA | + |
Preference number: 4 (lower is better) Translates to: TSLTSSRMKSKTPGSWKERCPHC*RWHGGP Trigger: TGGCCCACCATGCCACCTCCAGCAGTGAGGACAGCG...CTCTTTCCATGATCCTGGAGTCTTAGATTTCATCCTACTCGAAGTGAGGCTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | TCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCTCTAACTTATCAGGGAGAGCCTaGATGTTCACTGCAGCCAGG | + |
Preference number: 4 (lower is better) Translates to: SVAQAGLKCTLWHKLASNLSGRA*MFTAAR Trigger: CCTGGCTGCAGTGAACATCCAGGCTCTCCCTGATAA...GTTAGAGGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | AATGTACTCTGTGGCATAAACTGGCCTCTAACTCACAATCCCCACTCAGCCTTTTGGCCTCCTGAGCACTaGCTGGCTCCCTCAGGAGTT | + |
Preference number: 4 (lower is better) Translates to: NVLCGINWPLTHNPHSAFWPPEH*LAPSGV Trigger: AACTCCTGAGGGAGCCAGCCAGTGCTCAGGAGGCCA...AAAGGCTGAGTGGGGATTGTGAGTTAGAGGCCAGTTTATGCCACAGAGTACATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | GCTTACAAGACGCAGCCTGCCAGCAGGGAAACAGGACAGAGCCTACATAGGCAAACAATGACACTCTTTTaGGACCCTGGGCCTTTTTGG | + |
Preference number: 4 (lower is better) Translates to: AYKTQPASRETGQSLHRQTMTLF*DPGPFW Trigger: CCAAAAAGGCCCAGGGTCCCAAAAGAGTGTCATTGT...TTGCCTATGTAGGCTCTGTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR TCA 90 bp | GTTCTTCCAGACTCAGCTTCCAGGCCATCCAACGCCAAAGCTTCACTGGTTTTAGACTCAGATGGCTGCTaGGGCTTACTGGTTACAGAG | + |
Preference number: 4 (lower is better) Translates to: VLPDSASRPSNAKASLVLDSDGC*GLLVTE Trigger: CTCTGTAACCAGTAAGCCTCAGCAGCCATCTGAGTC...TAAAACCAGTGAAGCTTTGGCGTTGGATGGCCTGGAAGCTGAGTCTGGAAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR TCA 90 bp | GTTCTTCCAGACTCAGCTTCCAGGCCATCCAACGCCAAAGCTTCACTGGTTTTACTCTGGTCAGAATGCTaGAGGCTCCCCTTCTTCTGT | + |
Preference number: 4 (lower is better) Translates to: VLPDSASRPSNAKASLVLLWSEC*RLPFFC Trigger: ACAGAAGAAGGGGAGCCTTCAGCATTCTGACCAGAG...TAAAACCAGTGAAGCTTTGGCGTTGGATGGCCTGGAAGCTGAGTCTGGAAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR GCA 90 bp | TCTCATTCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCTGGGTCTTCTGCTACTaGTGTTTCACCCGGACAAGA | + |
Preference number: 4 (lower is better) Translates to: SHSVAQAGLKCTLWHKLAWVFCY*CFTRTR Trigger: TCTTGTCCGGGTGAAACAGCAGTAGCAGAAGACCCA...GGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGAATGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR GCA 90 bp | TCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCTCTAACCTGGGAGTGGTTAAATaGCTCCACCAGGTCCATTCT | + |
Preference number: 4 (lower is better) Translates to: SVAQAGLKCTLWHKLASNLGVVK*LHQVHS Trigger: AGAATGGACCTGGTGGAGGCATTTAACCACTCCCAG...GTTAGAGGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | CTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGAAAGAGTCTACATGGGGAGGTACCAAGTaGAGAGGGGCAGCAGCAGCT | + |
Preference number: 4 (lower is better) Translates to: LHGCLPEHFVVCFEKESTWGGTK*RGAAAA Trigger: AGCTGCTGCTGCCCCTCTCCACTTGGTACCTCCCCA...TGTAGACTCTTTCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | TGGTTGGTTACAAAGAGGCTTACAAGACGCAGCCTGCCAGCAGGGAAACAGGACGCTTACACACAGCAATaGATGTCTGTACTCGAGGGT | + |
Preference number: 4 (lower is better) Translates to: WLVTKRLTRRSLPAGKQDAYTQQ*MSVLEG Trigger: ACCCTCGAGTACAGACATCCATTGCTGTGTGTAAGC...GTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTAAGCCTCTTTGTAACCAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | TTGTGGTTTGTTTTGAGAAAGAGTCTACAACAGGCCAAAGTGGACCTCTCCATCAGATGGCAGCAGCACTaGCGAAGCCGCAGAAGCTGG | + |
Preference number: 4 (lower is better) Translates to: LWFVLRKSLQQAKVDLSIRWQQH*RSRRSW Trigger: CCAGCTTCTGCGGCTTCGCCAGTGCTGCTGCCATCT...GATGGAGAGGTCCACTTTGGCCTGTTGTAGACTCTTTCTCAAAACAAACCACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | TGGTTGGTTACAAAGAGGCTTACAAGACGCAGCCTGCCAGCAGGGAAACAGGACATCCGGTCACAAGCTTaGTCTTCAAGTGAGGGATTC | + |
Preference number: 4 (lower is better) Translates to: WLVTKRLTRRSLPAGKQDIRSQA*SSSEGF Trigger: GAATCCCTCACTTGAAGACCAAGCTTGTGACCGGAT...GTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTAAGCCTCTTTGTAACCAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR GCA 90 bp | GGAAGTATGGACTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGAGCAAAGCTCAGGTGCTaGTGGTGCTTCAGGAACAGG | + |
Preference number: 4 (lower is better) Translates to: GSMDYMAAFQSTLWFVLRAKLRC*WCFRNR Trigger: CCTGTTCCTGAAGCACCAGCAGCACCTGAGCTTTGC...TCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAGTCCATACTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | GACTCGAGATCCTCTTGCCTTTGCCTACAAAGTGCCAGCATTCTAAGCATGTGTGTTAAGCACCCTAAATaGGTTTCTCGGCTGGCTGGG | + |
Preference number: 4 (lower is better) Translates to: DSRSSCLCLQSASILSMCVKHPK*VSRLAG Trigger: CCCAGCCAGCCGAGAAACCCATTTAGGGTGCTTAAC...ACACATGCTTAGAATGCTGGCACTTTGTAGGCAAAGGCAAGAGGATCTCGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | ACAAGCCTCACTTCGAGTAGGATGAAATCTAAGACTCCAGGATCATGGAAAGAGCGAGTCAAAGAGAAGTaGGGACCCCGGCCTACTGGA | + |
Preference number: 4 (lower is better) Translates to: TSLTSSRMKSKTPGSWKERVKEK*GPRPTG Trigger: TCCAGTAGGCCGGGGTCCCCACTTCTCTTTGACTCG...CTCTTTCCATGATCCTGGAGTCTTAGATTTCATCCTACTCGAAGTGAGGCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | CATGCCAGGCTTAATTCTGAAATAACCAATGGGTTTCTATGGCCCACATTACACACAGCCCACCGGGCCTaGGCTTGGAGCTTACACACA | + |
Preference number: 4 (lower is better) Translates to: HARLNSEITNGFLWPTLHTAHRA*AWSLHT Trigger: TGTGTGTAAGCTCCAAGCCCAGGCCCGGTGGGCTGT...GTGTAATGTGGGCCATAGAAACCCATTGGTTATTTCAGAATTAAGCCTGGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR TCA 90 bp | CATGCCAGGCTTAATTCTGAAATAACCAATGGGTTTCTATGGCCCACATTACACTGCCACCAGGTCAGATaGGGGGTCCTTCTCCATCCT | + |
Preference number: 4 (lower is better) Translates to: HARLNSEITNGFLWPTLHCHQVR*GVLLHP Trigger: AGGATGGAGAAGGACCCCTCATCTGACCTGGTGGCA...GTGTAATGTGGGCCATAGAAACCCATTGGTTATTTCAGAATTAAGCCTGGCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR TCA 90 bp | TCTCATTCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCGGTAGAGATAGATTCTaGGTCTGTTGCTGGTTACAC | + |
Preference number: 4 (lower is better) Translates to: SHSVAQAGLKCTLWHKLAGRDRF*VCCWLH Trigger: GTGTAACCAGCAACAGACTCAGAATCTATCTCTACC...GGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGAATGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR TCA 90 bp | GACTCGAGATCCTCTTGCCTTTGCCTACAAAGTGCCAGCATTCTAAGCATGTGTGAGCTTCATCCAAAATaGTCCGAGCCCAGACTACCT | + |
Preference number: 4 (lower is better) Translates to: DSRSSCLCLQSASILSMCELHPK*SEPRLP Trigger: AGGTAGTCTGGGCTCGGATCATTTTGGATGAAGCTC...ACACATGCTTAGAATGCTGGCACTTTGTAGGCAAAGGCAAGAGGATCTCGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | ACAAGCCTCACTTCGAGTAGGATGAAATCTAAGACTCCAGGATCATGGAAAGAGGTTAGGTTTGCACGCTaGGCTGCTGGGTCAGAGGAA | + |
Preference number: 4 (lower is better) Translates to: TSLTSSRMKSKTPGSWKEVRFAR*AAGSEE Trigger: TTCCTCTGACCCAGCAGCCCAGCGTGCAAACCTAAC...CTCTTTCCATGATCCTGGAGTCTTAGATTTCATCCTACTCGAAGTGAGGCTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | TCTCATTCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCAGCCACTCTACTGAATaGATTATCAGGGCTTCTTCC | + |
Preference number: 4 (lower is better) Translates to: SHSVAQAGLKCTLWHKLASHSTE*IIRASS Trigger: GGAAGAAGCCCTGATAATCCATTCAGTAGAGTGGCT...GGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGAATGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | AATGTACTCTGTGGCATAAACTGGCCTCTAACTCACAATCCCCACTCAGCCTTTCAGAGCCATCGATGGTaGCGTAAGTCAGTCGGTTCT | + |
Preference number: 4 (lower is better) Translates to: NVLCGINWPLTHNPHSAFQSHRW*RKSVGS Trigger: AGAACCGACTGACTTACGCCACCATCGATGGCTCTG...AAAGGCTGAGTGGGGATTGTGAGTTAGAGGCCAGTTTATGCCACAGAGTACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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3UTR CAA 72 bp | ACCCAGGCTAACCTTAGACTCGAGATCCTCTTGCCTTaGCCTACAAAGTGCCAGCATTCTAAGCATGTGTCA | + |
Preference number: 4 (lower is better) Translates to: TQANLRLEILLP*PTKCQHSKHVS Trigger: TGACACATGCTTAGAATGCTGGCACTTTGTAGGCAAAGGCAAGAGGATCTCGAGTCTAAGGTTAGCCTGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR TCA 90 bp | CTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGAAAGAGTCTACATTCTCTGTTTGGGGTTaGCAGAGCCATCGATGGTGG | + |
Preference number: 4 (lower is better) Translates to: LHGCLPEHFVVCFEKESTFSVWG*QSHRWW Trigger: CCACCATCGATGGCTCTGTCAACCCCAAACAGAGAA...TGTAGACTCTTTCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR GCA 90 bp | AATGTACTCTGTGGCATAAACTGGCCTCTAACTCACAATCCCCACTCAGCCTTTCCTCTTTCTGGACCTTaGTTTCTGGGTTCTGACCAG | + |
Preference number: 4 (lower is better) Translates to: NVLCGINWPLTHNPHSAFPLSGP*FLGSDQ Trigger: CTGGTCAGAACCCAGAAAGCAAGGTCCAGAAAGAGG...AAAGGCTGAGTGGGGATTGTGAGTTAGAGGCCAGTTTATGCCACAGAGTACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR GCA 90 bp | ACAAGCCTCACTTCGAGTAGGATGAAATCTAAGACTCCAGGATCATGGAAAGAGAATGCCTGCTTCTGGTaGAGTAGCAAGGGGACCTTC | + |
Preference number: 4 (lower is better) Translates to: TSLTSSRMKSKTPGSWKENACFW*SSKGTF Trigger: GAAGGTCCCCTTGCTACTGCACCAGAAGCAGGCATT...CTCTTTCCATGATCCTGGAGTCTTAGATTTCATCCTACTCGAAGTGAGGCTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR GCA 90 bp | CTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGAAAGAGTCTACAGATCGCCTCCAGTTCTaGCAGCAGAGAAGACACCTT | + |
Preference number: 4 (lower is better) Translates to: LHGCLPEHFVVCFEKESTDRLQF*QQRRHL Trigger: AAGGTGTCTTCTCTGCTGGCAGAACTGGAGGCGATC...TGTAGACTCTTTCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | GGAAGTATGGACTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGACTGACCAGGAACACTTaGCACCAAAAGCTGGGTTTC | + |
Preference number: 4 (lower is better) Translates to: GSMDYMAAFQSTLWFVLRLTRNT*HQKLGF Trigger: GAAACCCAGCTTTTGGTGCCAAGTGTTCCTGGTCAG...TCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAGTCCATACTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | AATGTACTCTGTGGCATAAACTGGCCTCTAACTCACAATCCCCACTCAGCCTTTACGTGTCCCTCTTTCTaGACCTTGCTTTCTGGGTTC | + |
Preference number: 4 (lower is better) Translates to: NVLCGINWPLTHNPHSAFTCPSF*TLLSGF Trigger: GAACCCAGAAAGCAAGGTCCAGAAAGAGGGACACGT...AAAGGCTGAGTGGGGATTGTGAGTTAGAGGCCAGTTTATGCCACAGAGTACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | CTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGAAAGAGTCTACAGATGTTGCTCTGCTCTaGTTCCTGAGCGCTGCACTT | + |
Preference number: 4 (lower is better) Translates to: LHGCLPEHFVVCFEKESTDVALL*FLSAAL Trigger: AAGTGCAGCGCTCAGGAACCAGAGCAGAGCAACATC...TGTAGACTCTTTCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | CTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGAAAGAGTCTACAGGGCTTCTTCCATGGTaGCTGCCTCTACCTTCTTGT | + |
Preference number: 4 (lower is better) Translates to: LHGCLPEHFVVCFEKESTGLLPW*LPLPSC Trigger: ACAAGAAGGTAGAGGCAGCCACCATGGAAGAAGCCC...TGTAGACTCTTTCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | TTGTGGTTTGTTTTGAGAAAGAGTCTACAACAGGCCAAAGTGGACCTCTCCATCTCAGGGCTTCTTCCATaGTGGCTGCCTCTACCTTCT | + |
Preference number: 4 (lower is better) Translates to: LWFVLRKSLQQAKVDLSISGLLP*WLPLPS Trigger: AGAAGGTAGAGGCAGCCACCATGGAAGAAGCCCTGA...GATGGAGAGGTCCACTTTGGCCTGTTGTAGACTCTTTCTCAAAACAAACCACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR GCA 90 bp | AATGTACTCTGTGGCATAAACTGGCCTCTAACTCACAATCCCCACTCAGCCTTTTTCTTCCATGGTGGCTaGCTCTACCTTCTTGTCTCT | + |
Preference number: 4 (lower is better) Translates to: NVLCGINWPLTHNPHSAFFFHGG*LYLLVS Trigger: AGAGACAAGAAGGTAGAGGCAGCCACCATGGAAGAA...AAAGGCTGAGTGGGGATTGTGAGTTAGAGGCCAGTTTATGCCACAGAGTACATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | CTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGAAAGAGTCTACACTGGACCTTGCTTTCTaGGTTCTGACCAGGAACACT | + |
Preference number: 4 (lower is better) Translates to: LHGCLPEHFVVCFEKESTLDLAF*VLTRNT Trigger: AGTGTTCCTGGTCAGAACCCAGAAAGCAAGGTCCAG...TGTAGACTCTTTCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | GATGTTGATATATCCCTAAATGAAACCATGATGCACAGGCTAAATGAGAGATGCTGCACGCTGGGCTGCTaGGTCAGAGGAATCTCCCTT | + |
Preference number: 4 (lower is better) Translates to: DVDISLNETMMHRLNERCCTLGC*VRGISL Trigger: AAGGGAGATTCCTCTGACCCAGCAGCCCAGCGTGCA...GCATCTCTCATTTAGCCTGTGCATCATGGTTTCATTTAGGGATATATCAACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | GTTCTTCCAGACTCAGCTTCCAGGCCATCCAACGCCAAAGCTTCACTGGTTTTAACTGAACTCATCAAATaGGGAGCAACGGAGAAACTT | + |
Preference number: 4 (lower is better) Translates to: VLPDSASRPSNAKASLVLTELIK*GATEKL Trigger: AAGTTTCTCCGTTGCTCCCCATTTGATGAGTTCAGT...TAAAACCAGTGAAGCTTTGGCGTTGGATGGCCTGGAAGCTGAGTCTGGAAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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3UTR CAA 72 bp | GGAAGTATGGACTACATGGCTGCCTTCCAGAGCACTTaGTGGTTTGTTTTGAGAAAGAGTCTACAACAGGCC | + |
Preference number: 4 (lower is better) Translates to: GSMDYMAAFQST*WFVLRKSLQQA Trigger: GGCCTGTTGTAGACTCTTTCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAGTCCATACTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR TCA 90 bp | GATGTTGATATATCCCTAAATGAAACCATGATGCACAGGCTAAATGAGAGATGCCGAGCCCAGACTACCTaGAGCAAAGGTGCTGAGGTA | + |
Preference number: 4 (lower is better) Translates to: DVDISLNETMMHRLNERCRAQTT*SKGAEV Trigger: TACCTCAGCACCTTTGCTTCAGGTAGTCTGGGCTCG...GCATCTCTCATTTAGCCTGTGCATCATGGTTTCATTTAGGGATATATCAACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR GCA 90 bp | CATGCCAGGCTTAATTCTGAAATAACCAATGGGTTTCTATGGCCCACATTACACACCTCTCCATGGCCTTaGTTGGAAGCCATTCCTTCA | + |
Preference number: 4 (lower is better) Translates to: HARLNSEITNGFLWPTLHTSPWP*LEAIPS Trigger: TGAAGGAATGGCTTCCAAGCAAGGCCATGGAGAGGT...GTGTAATGTGGGCCATAGAAACCCATTGGTTATTTCAGAATTAAGCCTGGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR GCA 90 bp | GGAAGTATGGACTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGAGGCTCTTGGTTAAAATaGTTAACCGTTCCCCTCCTT | + |
Preference number: 4 (lower is better) Translates to: GSMDYMAAFQSTLWFVLRGSWLK*LTVPLL Trigger: AAGGAGGGGAACGGTTAAGCATTTTAACCAAGAGCC...TCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAGTCCATACTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR TCA 90 bp | GGAAGTATGGACTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGATTTGGGCTGGAACTTTaGTTTCTCTTGTTCTTCCCT | + |
Preference number: 4 (lower is better) Translates to: GSMDYMAAFQSTLWFVLRFGLEL*FLLFFP Trigger: AGGGAAGAACAAGAGAAATCAAAGTTCCAGCCCAAA...TCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAGTCCATACTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR TCA 90 bp | AATGTACTCTGTGGCATAAACTGGCCTCTAACTCACAATCCCCACTCAGCCTTTTCTTCTTGGTTAGGATaGGTGCAATCATTGTCAGAG | + |
Preference number: 4 (lower is better) Translates to: NVLCGINWPLTHNPHSAFSSWLG*VQSLSE Trigger: CTCTGACAATGATTGCACTCATCCTAACCAAGAAGA...AAAGGCTGAGTGGGGATTGTGAGTTAGAGGCCAGTTTATGCCACAGAGTACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR TCA 90 bp | GATGTTGATATATCCCTAAATGAAACCATGATGCACAGGCTAAATGAGAGATGCACAAGGTCAGAGCACTaGGCTGTTCTTCCAGGGACA | + |
Preference number: 4 (lower is better) Translates to: DVDISLNETMMHRLNERCTRSEH*AVLPGT Trigger: TGTCCCTGGAAGAACAGCTCAGTGCTCTGACCTTGT...GCATCTCTCATTTAGCCTGTGCATCATGGTTTCATTTAGGGATATATCAACATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR GCA 90 bp | CTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGAAAGAGTCTACATCCAAAGCCTGGATTTaGTTAAGCAACTTCTCACCC | + |
Preference number: 4 (lower is better) Translates to: LHGCLPEHFVVCFEKESTSKAWI*LSNFSP Trigger: GGGTGAGAAGTTGCTTAAGCAAATCCAGGCTTTGGA...TGTAGACTCTTTCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR GCA 90 bp | GATGTTGATATATCCCTAAATGAAACCATGATGCACAGGCTAAATGAGAGATGCCGGTTCTTCTTGAGGTaGAGTGCTACTACCTGCAGC | + |
Preference number: 4 (lower is better) Translates to: DVDISLNETMMHRLNERCRFFLR*SATTCS Trigger: GCTGCAGGTAGTAGCACTGCACCTCAAGAAGAACCG...GCATCTCTCATTTAGCCTGTGCATCATGGTTTCATTTAGGGATATATCAACATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | AAGGCGTTTATTAAGACCATACCAATGATAACACAATGTGGTACAATGGCAGAAGCTAATGCCTGCTTCTaGTGCAGTAGCAAGGGGACC | + |
Preference number: 4 (lower is better) Translates to: KAFIKTIPMITQCGTMAEANACF*CSSKGT Trigger: GGTCCCCTTGCTACTGCACCAGAAGCAGGCATTAGC...TTCTGCCATTGTACCACATTGTGTTATCATTGGTATGGTCTTAATAAACGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | GATGTTGATATATCCCTAAATGAAACCATGATGCACAGGCTAAATGAGAGATGCGTGCCGACTCCGGTTTaGCCCATGGTAGAGATAGAT | + |
Preference number: 4 (lower is better) Translates to: DVDISLNETMMHRLNERCVPTPV*PMVEID Trigger: ATCTATCTCTACCATGGGCCAAACCGGAGTCGGCAC...GCATCTCTCATTTAGCCTGTGCATCATGGTTTCATTTAGGGATATATCAACATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | GATGTTGATATATCCCTAAATGAAACCATGATGCACAGGCTAAATGAGAGATGCTTTAACCGGTGCAGCTaGCATCTACGTGCAGGCAGT | + |
Preference number: 4 (lower is better) Translates to: DVDISLNETMMHRLNERCFNRCS*HLRAGS Trigger: ACTGCCTGCACGTAGATGCCAGCTGCACCGGTTAAA...GCATCTCTCATTTAGCCTGTGCATCATGGTTTCATTTAGGGATATATCAACATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR TCA 90 bp | AAGGCGTTTATTAAGACCATACCAATGATAACACAATGTGGTACAATGGCAGAAGCTCCCCTTCTTCTGTaGGTCCACAGTCGAGTCAAA | + |
Preference number: 4 (lower is better) Translates to: KAFIKTIPMITQCGTMAEAPLLL*VHSRVK Trigger: TTTGACTCGACTGTGGACTCACAGAAGAAGGGGAGC...TTCTGCCATTGTACCACATTGTGTTATCATTGGTATGGTCTTAATAAACGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | AAGGCGTTTATTAAGACCATACCAATGATAACACAATGTGGTACAATGGCAGAAACTGAGGTTTGCTCCTaGGACCTCTCCCTCTTGCTT | + |
Preference number: 4 (lower is better) Translates to: KAFIKTIPMITQCGTMAETEVCS*DLSLLL Trigger: AAGCAAGAGGGAGAGGTCCCAGGAGCAAACCTCAGT...TTCTGCCATTGTACCACATTGTGTTATCATTGGTATGGTCTTAATAAACGCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR TCA 90 bp | CTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGAAAGAGTCTACATCATGCAATAAACAGTaGGAAACAGGAATATCGGTG | + |
Preference number: 4 (lower is better) Translates to: LHGCLPEHFVVCFEKESTSCNKQ*ETGISV Trigger: CACCGATATTCCTGTTTCTCACTGTTTATTGCATGA...TGTAGACTCTTTCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR TCA 90 bp | AAGGCGTTTATTAAGACCATACCAATGATAACACAATGTGGTACAATGGCAGAAAGCATGCTGGTCCACTaGGAGACAATGACACTCTTT | + |
Preference number: 4 (lower is better) Translates to: KAFIKTIPMITQCGTMAESMLVH*ETMTLF Trigger: AAAGAGTGTCATTGTCTCTCAGTGGACCAGCATGCT...TTCTGCCATTGTACCACATTGTGTTATCATTGGTATGGTCTTAATAAACGCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | AAGGCGTTTATTAAGACCATACCAATGATAACACAATGTGGTACAATGGCAGAACCAGAGGTTTACCAGTaGAATCCAGCTGGTCTTTTG | + |
Preference number: 4 (lower is better) Translates to: KAFIKTIPMITQCGTMAEPEVYQ*NPAGLL Trigger: CAAAAGACCAGCTGGATTCCACTGGTAAACCTCTGG...TTCTGCCATTGTACCACATTGTGTTATCATTGGTATGGTCTTAATAAACGCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR TCA 90 bp | GATGTTGATATATCCCTAAATGAAACCATGATGCACAGGCTAAATGAGAGATGCTCCTTGCTTTTCTGCTaGTTCTTCTTGGTTAGGATG | + |
Preference number: 4 (lower is better) Translates to: DVDISLNETMMHRLNERCSLLFC*FFLVRM Trigger: CATCCTAACCAAGAAGAATCAGCAGAAAAGCAAGGA...GCATCTCTCATTTAGCCTGTGCATCATGGTTTCATTTAGGGATATATCAACATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR TCA 90 bp | GATGTTGATATATCCCTAAATGAAACCATGATGCACAGGCTAAATGAGAGATGCAGACAAACCTGTGTATaGCAACATCCTTCTTCTGTC | + |
Preference number: 4 (lower is better) Translates to: DVDISLNETMMHRLNERCRQTCV*QHPSSV Trigger: GACAGAAGAAGGATGTTGTCATACACAGGTTTGTCT...GCATCTCTCATTTAGCCTGTGCATCATGGTTTCATTTAGGGATATATCAACATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CCA 90 bp | AAGGCGTTTATTAAGACCATACCAATGATAACACAATGTGGTACAATGGCAGAAGAACCATTGTCAACCTaGCTCTTCCAAAGACTGAAC | + |
Preference number: 4 (lower is better) Translates to: KAFIKTIPMITQCGTMAEEPLST*LFQRLN Trigger: GTTCAGTCTTTGGAAGAGCCAGGTTGACAATGGTTC...TTCTGCCATTGTACCACATTGTGTTATCATTGGTATGGTCTTAATAAACGCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS GCA 90 bp | AGCAGCACTGGCGAAGCCGCAGAAGCTGGGACAGGACATGGACGGTaGTGGGTCTTTGGGAGTCTGCCGCAGGGCAGCCCTGGGACACAC | + |
Preference number: 5 (lower is better) Translates to: SSTGEAAEAGTGHGR*WVFGSLPQGSPGTH Trigger: GTGTGTCCCAGGGCTGCCCTGCGGCAGACTCCCAAAGACCCAGCACCGTCCATGTCCTGTCCCAGCTTCTGCGGCTTCGCCAGTGCTGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076941.12 ENSMUST00000151697.2 |
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CDS CCA 90 bp | AGCACTGGCGAAGCCGCAGAAGCTGGGACAGGACATGGACGGTGCTaGGTCTTTGGGAGTCTGCCGCAGGGCAGCCCTGGGACACACTGG | + |
Preference number: 5 (lower is better) Translates to: STGEAAEAGTGHGRC*VFGSLPQGSPGTHW Trigger: CCAGTGTGTCCCAGGGCTGCCCTGCGGCAGACTCCCAAAGACCCAGCACCGTCCATGTCCTGTCCCAGCTTCTGCGGCTTCGCCAGTGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076941.12 ENSMUST00000151697.2 |
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CDS CCA 90 bp | GTGGGGTCCAGAGCCGACTTCAGCAGAGAAAGATGGCAGCAGCACTaGCGAAGCCGCAGAAGCTGGGACAGGACATGGACGGTGCTGGGT | + |
Preference number: 5 (lower is better) Translates to: VGSRADFSRERWQQH*RSRRSWDRTWTVLG Trigger: ACCCAGCACCGTCCATGTCCTGTCCCAGCTTCTGCGGCTTCGCCAGTGCTGCTGCCATCTTTCTCTGCTGAAGTCGGCTCTGGACCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CCA 90 bp | GGGGCGTCTCTCACCGACTTCAGCAGAGAAAGATGGCAGCAGCACTaGCGAAGCCGCAGAAGCTGGGACAGGACATGGACGGTGCTGGGT | + |
Preference number: 5 (lower is better) Translates to: GASLTDFSRERWQQH*RSRRSWDRTWTVLG Trigger: ACCCAGCACCGTCCATGTCCTGTCCCAGCTTCTGCGGCTTCGCCAGTGCTGCTGCCATCTTTCTCTGCTGAAGTCGGTGAGAGACGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151697.2 |
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CDS GCA 90 bp | GGTGGCATGGTGGGCCATTCCCGAGCAAAGCTCAGGTGCTGCTGGTaGTTCAGGAACAGGCCTCCAAGTCTTGGATGGTCCCTGGAGAGG | + |
Preference number: 5 (lower is better) Translates to: GGMVGHSRAKLRCCW*FRNRPPSLGWSLER Trigger: CCTCTCCAGGGACCATCCAAGACTTGGAGGCCTGTTCCTGAAGCACCAGCAGCACCTGAGCTTTGCTCGGGAATGGCCCACCATGCCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS GCA 90 bp | GCTGGAGGTGGCATGGTGGGCCATTCCCGAGCAAAGCTCAGGTGCTaGTGGTGCTTCAGGAACAGGCCTCCAAGTCTTGGATGGTCCCTG | + |
Preference number: 5 (lower is better) Translates to: AGGGMVGHSRAKLRC*WCFRNRPPSLGWSL Trigger: CAGGGACCATCCAAGACTTGGAGGCCTGTTCCTGAAGCACCAGCAGCACCTGAGCTTTGCTCGGGAATGGCCCACCATGCCACCTCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS GCA 90 bp | ACTGCTGGAGGTGGCATGGTGGGCCATTCCCGAGCAAAGCTCAGGTaGTGCTGGTGCTTCAGGAACAGGCCTCCAAGTCTTGGATGGTCC | + |
Preference number: 5 (lower is better) Translates to: TAGGGMVGHSRAKLR*CWCFRNRPPSLGWS Trigger: GGACCATCCAAGACTTGGAGGCCTGTTCCTGAAGCACCAGCAGCACCTGAGCTTTGCTCGGGAATGGCCCACCATGCCACCTCCAGCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CCA 90 bp | ACCCCGGCCTACTGGAAACACCATCATCTTCGCTGTCCTCACTGCTaGAGGTGGCATGGTGGGCCATTCCCGAGCAAAGCTCAGGTGCTG | + |
Preference number: 5 (lower is better) Translates to: TPAYWKHHHLRCPHC*RWHGGPFPSKAQVL Trigger: CAGCACCTGAGCTTTGCTCGGGAATGGCCCACCATGCCACCTCCAGCAGTGAGGACAGCGAAGATGATGGTGTTTCCAGTAGGCCGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CCA 90 bp | TTCAGCAGAGAAAGATGGCAGCAGCACTGGCGAAGCCGCAGAAGCTaGGACAGGACATGGACGGTGCTGGGTCTTTGGGAGTCTGCCGCA | + |
Preference number: 5 (lower is better) Translates to: FSRERWQQHWRSRRS*DRTWTVLGLWESAA Trigger: TGCGGCAGACTCCCAAAGACCCAGCACCGTCCATGTCCTGTCCCAGCTTCTGCGGCTTCGCCAGTGCTGCTGCCATCTTTCTCTGCTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076941.12 ENSMUST00000151697.2 |
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CDS CCA 90 bp | GCCTACTGGAAACACCATCATCTTCGCTGTCCTCACTGCTGGAGGTaGCATGGTGGGCCATTCCCGAGCAAAGCTCAGGTGCTGCTGGTG | + |
Preference number: 5 (lower is better) Translates to: AYWKHHHLRCPHCWR*HGGPFPSKAQVLLV Trigger: CACCAGCAGCACCTGAGCTTTGCTCGGGAATGGCCCACCATGCCACCTCCAGCAGTGAGGACAGCGAAGATGATGGTGTTTCCAGTAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CCA 90 bp | ATGACTACAGACGGGGCGTCTCTCACCGACTTCAGCAGAGAAAGATaGCAGCAGCACTGGCGAAGCCGCAGAAGCTGGGACAGGACATGG | + |
Preference number: 5 (lower is better) Translates to: MTTDGASLTDFSRER*QQHWRSRRSWDRTW Trigger: CCATGTCCTGTCCCAGCTTCTGCGGCTTCGCCAGTGCTGCTGCCATCTTTCTCTGCTGAAGTCGGTGAGAGACGCCCCGTCTGTAGTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151697.2 |
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CDS CCA 90 bp | GAAACACCATCATCTTCGCTGTCCTCACTGCTGGAGGTGGCATGGTaGGCCATTCCCGAGCAAAGCTCAGGTGCTGCTGGTGCTTCAGGA | + |
Preference number: 5 (lower is better) Translates to: ETPSSSLSSLLEVAW*AIPEQSSGAAGASG Trigger: TCCTGAAGCACCAGCAGCACCTGAGCTTTGCTCGGGAATGGCCCACCATGCCACCTCCAGCAGTGAGGACAGCGAAGATGATGGTGTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CCA 90 bp | CTGGAAACACCATCATCTTCGCTGTCCTCACTGCTGGAGGTGGCATaGTGGGCCATTCCCGAGCAAAGCTCAGGTGCTGCTGGTGCTTCA | + |
Preference number: 5 (lower is better) Translates to: LETPSSSLSSLLEVA*WAIPEQSSGAAGAS Trigger: TGAAGCACCAGCAGCACCTGAGCTTTGCTCGGGAATGGCCCACCATGCCACCTCCAGCAGTGAGGACAGCGAAGATGATGGTGTTTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS GCA 90 bp | TCTTTAGGGTTAGGATCCTGCCGCCATGGGACGTTTCCACACCACTaGTTCCCCTCCGCCTTGGTTCTAGCACATCGGAAGAACAGCCTC | + |
Preference number: 5 (lower is better) Translates to: SLGLGSCRHGTFPHH*FPSALVLAHRKNSL Trigger: GAGGCTGTTCTTCCGATGTGCTAGAACCAAGGCGGAGGGGAAGCAGTGGTGTGGAAACGTCCCATGGCGGCAGGATCCTAACCCTAAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CCA 90 bp | GTGAGTCCACAGTCGAGTCAAAGAGAAGTGGGGACCCCGGCCTACTaGAAACACCATCATCTTCGCTGTCCTCACTGCTGGAGGTGGCAT | + |
Preference number: 5 (lower is better) Translates to: VSPQSSQREVGTPAY*KHHHLRCPHCWRWH Trigger: ATGCCACCTCCAGCAGTGAGGACAGCGAAGATGATGGTGTTTCCAGTAGGCCGGGGTCCCCACTTCTCTTTGACTCGACTGTGGACTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CAA 90 bp | CCCCACTCAGCCTTTCAGGTGCTGGGAAGTATGGACTACATGGCTGCCTTCCAGTCAGCCAGTGTGAGCTaGGTGACAGGTCCTTCGGAT | + |
Preference number: 5 (lower is better) Translates to: PHSAFQVLGSMDYMAAFQSASVS*VTGPSD Trigger: ATCCGAAGGACCTGTCACCAAGCTCACACTGGCTGA...CTGGAAGGCAGCCATGTAGTCCATACTTCCCAGCACCTGAAAGGCTGAGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 90 bp | ACGCTGGGCTGCTGGGTCAGAGGAATCTCCCTTCTTGGAAACACCTaGAGCAGCAGGCATCTGTCTCTGCACACTCTGGTCAGAATGCTG | + |
Preference number: 5 (lower is better) Translates to: TLGCWVRGISLLGNT*SSRHLSLHTLVRML Trigger: CAGCATTCTGACCAGAGTGTGCAGAGACAGATGCCTGCTGCTTCAGGTGTTTCCAAGAAGGGAGATTCCTCTGACCCAGCAGCCCAGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 90 bp | AGAGGGGCAGCAGCAGCTTTGGTGATGTTGCTCTGCTCTGGTTCCTaGGCGCTGCACTTCTCTTTAGTTCCTTGTTCTGGGGAGAGAGCC | + |
Preference number: 5 (lower is better) Translates to: RGAAAALVMLLCSGS*ALHFSLVPCSGERA Trigger: GGCTCTCTCCCCAGAACAAGGAACTAAAGAGAAGTGCAGCGCTCAGGAACCAGAGCAGAGCAACATCACCAAAGCTGCTGCTGCCCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS GCA 90 bp | CAGCTGGCATCTACGTGCAGGCAGTGCTACCTCCACACTGAGGTTTaGTCCTGGGACCTCTCCCTCTTGCTTCGTTGTAGGAATCTCCNN | + |
Preference number: 5 (lower is better) Translates to: QLASTCRQCYLHTEV*SWDLSLLLRCRNLX Trigger: NNGGAGATTCCTACAACGAAGCAAGAGGGAGAGGTCCCAGGAGCAAACCTCAGTGTGGAGGTAGCACTGCCTGCACGTAGATGCCAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151697.2 |
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CDS CCA 90 bp | TGTTCGGGACCCCTCGACTCTCACTCTCTGACATGTGAGGACCCTTaGGTATTCCTTGAAGCACCTCTCCATGGCCTTGCTTGGAAGCCA | + |
Preference number: 5 (lower is better) Translates to: CSGPLDSHSLTCEDP*VFLEAPLHGLAWKP Trigger: TGGCTTCCAAGCAAGGCCATGGAGAGGTGCTTCAAGGAATACCCAAGGGTCCTCACATGTCAGAGAGTGAGAGTCGAGGGGTCCCGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CCA 90 bp | CTGCTCTGGTTCCTGAGCGCTGCACTTCTCTTTAGTTCCTTGTTCTaGGGAGAGAGCCAGAGCACTGAGTGCGTCCTCCAAAGCCTGGAT | + |
Preference number: 5 (lower is better) Translates to: LLWFLSAALLFSSLF*GESQSTECVLQSLD Trigger: ATCCAGGCTTTGGAGGACGCACTCAGTGCTCTGGCTCTCTCCCCAGAACAAGGAACTAAAGAGAAGTGCAGCGCTCAGGAACCAGAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 90 bp | TCTCAGAGTCTCTGGCTTGTTCGGGACCCCTCGACTCTCACTCTCTaGCATGTGAGGACCCTTGGGTATTCCTTGAAGCACCTCTCCATG | + |
Preference number: 5 (lower is better) Translates to: SQSLWLVRDPSTLTL*HVRTLGYSLKHLSM Trigger: CATGGAGAGGTGCTTCAAGGAATACCCAAGGGTCCTCACATGTCAGAGAGTGAGAGTCGAGGGGTCCCGAACAAGCCAGAGACTCTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 90 bp | GGCAGCCCTGGGACACACTGGATCCAAACTCCTGAGCCACTCTACTaGATGGATTATCAGGGCTTCTTCCATGGTGGCTGCCTCTACCTT | + |
Preference number: 5 (lower is better) Translates to: GSPGTHWIQTPEPLY*MDYQGFFHGGCLYL Trigger: AAGGTAGAGGCAGCCACCATGGAAGAAGCCCTGATAATCCATTCAGTAGAGTGGCTCAGGAGTTTGGATCCAGTGTGTCCCAGGGCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076941.12 ENSMUST00000151697.2 |
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CDS TCA 90 bp | GGTGCAGTGCTACTACCTGCAGCATGCTGGTCCACTGAGAGACAATaGCACTCTTTTGGGACCCTGGGCCTTTTTGGATCGCCTCCAGTT | + |
Preference number: 5 (lower is better) Translates to: GAVLLPAACWSTERQ*HSFGTLGLFGSPPV Trigger: AACTGGAGGCGATCCAAAAAGGCCCAGGGTCCCAAAAGAGTGTCATTGTCTCTCAGTGGACCAGCATGCTGCAGGTAGTAGCACTGCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS GCA 90 bp | CAAGAGGGAGATCAGCATGACCTGAGGTCCCTGGGAGTGGTTAAATaGCTCCACCAGGTCCATTCTCTGTTTGGGGTTGACAGAGCCATC | + |
Preference number: 5 (lower is better) Translates to: QEGDQHDLRSLGVVK*LHQVHSLFGVDRAI Trigger: GATGGCTCTGTCAACCCCAAACAGAGAATGGACCTGGTGGAGGCATTTAACCACTCCCAGGGACCTCAGGTCATGCTGATCTCCCTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CCA 90 bp | CTTACTGGTTACAGAGAGTTCTTTAGGGTTAGGATCCTGCCGCCATaGGACGTTTCCACACCACTGCTTCCCCTCCGCCTTGGTTCTAGC | + |
Preference number: 5 (lower is better) Translates to: LTGYREFFRVRILPP*DVSTPLLPLRLGSS Trigger: GCTAGAACCAAGGCGGAGGGGAAGCAGTGGTGTGGAAACGTCCCATGGCGGCAGGATCCTAACCCTAAAGAACTCTCTGTAACCAGTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CCA 90 bp | CAAGTGGAGAGGGGCAGCAGCAGCTTTGGTGATGTTGCTCTGCTCTaGTTCCTGAGCGCTGCACTTCTCTTTAGTTCCTTGTTCTGGGGA | + |
Preference number: 5 (lower is better) Translates to: QVERGSSSFGDVALL*FLSAALLFSSLFWG Trigger: TCCCCAGAACAAGGAACTAAAGAGAAGTGCAGCGCTCAGGAACCAGAGCAGAGCAACATCACCAAAGCTGCTGCTGCCCCTCTCCACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CAA 90 bp | GCTTACAAGACGCAGCCTGCCAGCAGGGAAACAGGACAGAGCCTACATAGGCAATCTCCATGGCCTTGCTaGGAAGCCATTCCTTCAGCT | + |
Preference number: 5 (lower is better) Translates to: AYKTQPASRETGQSLHRQSPWPC*EAIPSA Trigger: AGCTGAAGGAATGGCTTCCAAGCAAGGCCATGGAGA...TTGCCTATGTAGGCTCTGTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CAA 90 bp | TGGTTGGTTACAAAGAGGCTTACAAGACGCAGCCTGCCAGCAGGGAAACAGGACCACCTCTCCATGGCCTaGCTTGGAAGCCATTCCTTC | + |
Preference number: 5 (lower is better) Translates to: WLVTKRLTRRSLPAGKQDHLSMA*LGSHSF Trigger: GAAGGAATGGCTTCCAAGCAAGGCCATGGAGAGGTG...GTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTAAGCCTCTTTGTAACCAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 90 bp | CCTGAAGCAGCAGGCATCTGTCTCTGCACACTCTGGTCAGAATGCTaGAGGCTCCCCTTCTTCTGTGAGTCCACAGTCGAGTCAAAGAGA | + |
Preference number: 5 (lower is better) Translates to: PEAAGICLCTLWSEC*RLPFFCESTVESKR Trigger: TCTCTTTGACTCGACTGTGGACTCACAGAAGAAGGGGAGCCTTCAGCATTCTGACCAGAGTGTGCAGAGACAGATGCCTGCTGCTTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS GCA 90 bp | GACACTCTTTTGGGACCCTGGGCCTTTTTGGATCGCCTCCAGTTCTaGCAGCAGAGAAGACACCTTGGTGCTCCTTCGTGTGTCATCAAA | + |
Preference number: 5 (lower is better) Translates to: DTLLGPWAFLDRLQF*QQRRHLGAPSCVIK Trigger: TTTGATGACACACGAAGGAGCACCAAGGTGTCTTCTCTGCTGGCAGAACTGGAGGCGATCCAAAAAGGCCCAGGGTCCCAAAAGAGTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS GCA 90 bp | GCCATCGATGGTGGCGTAAGTCAGTCGGTTCTTCTTGAGGTGCAGTaGTACTACCTGCAGCATGCTGGTCCACTGAGAGACAATGACACT | + |
Preference number: 5 (lower is better) Translates to: AIDGGVSQSVLLEVQ*YYLQHAGPLRDNDT Trigger: AGTGTCATTGTCTCTCAGTGGACCAGCATGCTGCAGGTAGTAGCACTGCACCTCAAGAAGAACCGACTGACTTACGCCACCATCGATGGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CCA 90 bp | GCAGCTGGCATCTACGTGCAGGCAGTGCTACCAGAGGTTTACCAGTaGAATCCAGCTGGTCTTTTGTTCTCCTCAGCAAAAGGCTCTTGG | + |
Preference number: 5 (lower is better) Translates to: AAGIYVQAVLPEVYQ*NPAGLLFSSAKGSW Trigger: CCAAGAGCCTTTTGCTGAGGAGAACAAAAGACCAGCTGGATTCCACTGGTAAACCTCTGGTAGCACTGCCTGCACGTAGATGCCAGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CAA 90 bp | TGGTTGGTTACAAAGAGGCTTACAAGACGCAGCCTGCCAGCAGGGAAACAGGACATGCCAAAGAGGATCTaGAGGTCAGCCAGTGTGAGC | + |
Preference number: 5 (lower is better) Translates to: WLVTKRLTRRSLPAGKQDMPKRI*RSASVS Trigger: GCTCACACTGGCTGACCTCAAGATCCTCTTTGGCAT...GTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTAAGCCTCTTTGTAACCAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CAA 90 bp | GACTCGAGATCCTCTTGCCTTTGCCTACAAAGTGCCAGCATTCTAAGCATGTGTGGGGCAGCAGCAGCTTaGGTGATGTTGCTCTGCTCT | + |
Preference number: 5 (lower is better) Translates to: DSRSSCLCLQSASILSMCGAAAA*VMLLCS Trigger: AGAGCAGAGCAACATCACCAAAGCTGCTGCTGCCCC...ACACATGCTTAGAATGCTGGCACTTTGTAGGCAAAGGCAAGAGGATCTCGAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CAA 90 bp | TGGTTGGTTACAAAGAGGCTTACAAGACGCAGCCTGCCAGCAGGGAAACAGGACGTTCCCCTCCTTTCATaGAACCATTGTCAACCTGGC | + |
Preference number: 5 (lower is better) Translates to: WLVTKRLTRRSLPAGKQDVPLLS*NHCQPG Trigger: GCCAGGTTGACAATGGTTCAATGAAAGGAGGGGAAC...GTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTAAGCCTCTTTGTAACCAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CAA 90 bp | TACAAGACGCAGCCTGCCAGCAGGGAAACAGGACAGAGCCTACATAGGCAAGGTAATCCAGCTGGTCTTTaGTTCTCCTCAGCAAAAGGC | + |
Preference number: 5 (lower is better) Translates to: YKTQPASRETGQSLHRQGNPAGL*FSSAKG Trigger: GCCTTTTGCTGAGGAGAACAAAAGACCAGCTGGATT...ACCTTGCCTATGTAGGCTCTGTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CAA 90 bp | TCTCATTCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCAGGTCCATTCTCTGTTaGGGGTTGACAGAGCCATCG | + |
Preference number: 5 (lower is better) Translates to: SHSVAQAGLKCTLWHKLARSILC*GLTEPS Trigger: CGATGGCTCTGTCAACCCCAAACAGAGAATGGACCT...GGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGAATGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 90 bp | AAGCACCCTAAATGGGTTTCTCGGCTGGCTGGGAGAGTGAAGCTGTaGCTCAGATGGCTGCTGAGGCTTACTGGTTACAGAGAGTTCTTT | + |
Preference number: 5 (lower is better) Translates to: KHPKWVSRLAGRVKL*LRWLLRLTGYREFF Trigger: AAAGAACTCTCTGTAACCAGTAAGCCTCAGCAGCCATCTGAGTCACAGCTTCACTCTCCCAGCCAGCCGAGAAACCCATTTAGGGTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 90 bp | GATTTTCCACACATTATAAAGATGATGTTGGTTCATATGGCCTCCTaGGCACTGGCTGGCTCCCTCAGGAGTTTCCTGGCGGCCTGCCTT | + |
Preference number: 5 (lower is better) Translates to: DFPHIIKMMLVHMAS*ALAGSLRSFLAACL Trigger: AAGGCAGGCCGCCAGGAAACTCCTGAGGGAGCCAGCCAGTGCTCAGGAGGCCATATGAACCAACATCATCTTTATAATGTGTGGAAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 90 bp | AGCTGGGTCTTCTGCTACTGCTGTTTCACCCGGACAAGACTTCAGTaGCCGATGCAGCTCATCTATGGCTTCACTCGTGATTTTCCACAC | + |
Preference number: 5 (lower is better) Translates to: SWVFCYCCFTRTRLQ*PMQLIYGFTRDFPH Trigger: GTGTGGAAAATCACGAGTGAAGCCATAGATGAGCTGCATCGGTCACTGAAGTCTTGTCCGGGTGAAACAGCAGTAGCAGAAGACCCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 90 bp | CTGAGTCTGTTGCTGGTTACACGTTTCTCTACTTCGTTCTTCCAGTaGTGGATCAGGGAAGCGGGGCAGACGATCAGTGTTCCACTGGAA | + |
Preference number: 5 (lower is better) Translates to: LSLLLVTRFSTSFFQ*WIREAGQTISVPLE Trigger: TTCCAGTGGAACACTGATCGTCTGCCCCGCTTCCCTGATCCATCACTGGAAGAACGAAGTAGAGAAACGTGTAACCAGCAACAGACTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 90 bp | TTCTTCTTGAGGTGCAGTGCTACTACCTGCAGCATGCTGGTCCACTaGGAGACAATGACACTCTTTTGGGACCCTGGGCCTTTTTGGATC | + |
Preference number: 5 (lower is better) Translates to: FFLRCSATTCSMLVH*ETMTLFWDPGPFWI Trigger: GATCCAAAAAGGCCCAGGGTCCCAAAAGAGTGTCATTGTCTCTCAGTGGACCAGCATGCTGCAGGTAGTAGCACTGCACCTCAAGAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CAA 90 bp | TCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCTCTAACCTTCTCTTTAGTTCCTaGTTCTGGGGAGAGAGCCAG | + |
Preference number: 5 (lower is better) Translates to: SVAQAGLKCTLWHKLASNLLFSS*FWGESQ Trigger: CTGGCTCTCTCCCCAGAACAAGGAACTAAAGAGAAG...GTTAGAGGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CAA 90 bp | GGAAGTATGGACTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGACGTGCCGACTCCGGTTaGGCCCATGGTAGAGATAGA | + |
Preference number: 5 (lower is better) Translates to: GSMDYMAAFQSTLWFVLRRADSG*AHGRDR Trigger: TCTATCTCTACCATGGGCCAAACCGGAGTCGGCACG...TCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAGTCCATACTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CCA 90 bp | AGGGTACCCTTCTTTTGTTTCAGCTGTGTTGTTAGGTTTGCACGCTaGGCTGCTGGGTCAGAGGAATCTCCCTTCTTGGAAACACCTGAA | + |
Preference number: 5 (lower is better) Translates to: RVPFFCFSCVVRFAR*AAGSEESPFLETPE Trigger: TTCAGGTGTTTCCAAGAAGGGAGATTCCTCTGACCCAGCAGCCCAGCGTGCAAACCTAACAACACAGCTGAAACAAAAGAAGGGTACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CCA 90 bp | CACGATGTCATACGTAGAGAGTACTTTTGCGTGCCGACTCCGGTTTaGCCCATGGTAGAGATAGATTCTGAGTCTGTTGCTGGTTACACG | + |
Preference number: 5 (lower is better) Translates to: HDVIRREYFCVPTPV*PMVEIDSESVAGYT Trigger: CGTGTAACCAGCAACAGACTCAGAATCTATCTCTACCATGGGCCAAACCGGAGTCGGCACGCAAAAGTACTCTCTACGTATGACATCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CAA 90 bp | TTGTGGTTTGTTTTGAGAAAGAGTCTACAACAGGCCAAAGTGGACCTCTCCATCGCTGTGTTGTTAGGTTaGCACGCTGGGCTGCTGGGT | + |
Preference number: 5 (lower is better) Translates to: LWFVLRKSLQQAKVDLSIAVLLG*HAGLLG Trigger: ACCCAGCAGCCCAGCGTGCAAACCTAACAACACAGC...GATGGAGAGGTCCACTTTGGCCTGTTGTAGACTCTTTCTCAAAACAAACCACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 90 bp | CTTTTGCGTGCCGACTCCGGTTTGGCCCATGGTAGAGATAGATTCTaGGTCTGTTGCTGGTTACACGTTTCTCTACTTCGTTCTTCCAGT | + |
Preference number: 5 (lower is better) Translates to: LLRADSGLAHGRDRF*VCCWLHVSLLRSSS Trigger: ACTGGAAGAACGAAGTAGAGAAACGTGTAACCAGCAACAGACTCAGAATCTATCTCTACCATGGGCCAAACCGGAGTCGGCACGCAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CAA 90 bp | GCTTACAAGACGCAGCCTGCCAGCAGGGAAACAGGACAGAGCCTACATAGGCAATCGTTCGAGTGTTTTTaGATTCTTGTTAAGCACCCT | + |
Preference number: 5 (lower is better) Translates to: AYKTQPASRETGQSLHRQSFECF*ILVKHP Trigger: AGGGTGCTTAACAAGAATCAAAAAACACTCGAACGA...TTGCCTATGTAGGCTCTGTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CAA 90 bp | AATGTACTCTGTGGCATAAACTGGCCTCTAACTCACAATCCCCACTCAGCCTTTTCTGAGACATCGACCTaGGACAAGGTCAGAGCACTG | + |
Preference number: 5 (lower is better) Translates to: NVLCGINWPLTHNPHSAFSETST*DKVRAL Trigger: CAGTGCTCTGACCTTGTCCAAGGTCGATGTCTCAGA...AAAGGCTGAGTGGGGATTGTGAGTTAGAGGCCAGTTTATGCCACAGAGTACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 90 bp | ATGTCTGTACTCGAGGGTTTTTCACGTTATGAGCTTCATCCAAAATaGTCCGAGCCCAGACTACCTGAAGCAAAGGTGCTGAGGTACCCT | + |
Preference number: 5 (lower is better) Translates to: MSVLEGFSRYELHPK*SEPRLPEAKVLRYP Trigger: AGGGTACCTCAGCACCTTTGCTTCAGGTAGTCTGGGCTCGGATCATTTTGGATGAAGCTCATAACGTGAAAAACCCTCGAGTACAGACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CAA 90 bp | GATGTTGATATATCCCTAAATGAAACCATGATGCACAGGCTAAATGAGAGATGCACAGGCCTCCAAGTCTaGGATGGTCCCTGGAGAGGC | + |
Preference number: 5 (lower is better) Translates to: DVDISLNETMMHRLNERCTGLQV*DGPWRG Trigger: GCCTCTCCAGGGACCATCCAAGACTTGGAGGCCTGT...GCATCTCTCATTTAGCCTGTGCATCATGGTTTCATTTAGGGATATATCAACATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CAA 90 bp | ACAAGCCTCACTTCGAGTAGGATGAAATCTAAGACTCCAGGATCATGGAAAGAGTGGGACCTCTCCCTCTaGCTTCGTTGTAGGAATCTC | + |
Preference number: 5 (lower is better) Translates to: TSLTSSRMKSKTPGSWKEWDLSL*LRCRNL Trigger: GAGATTCCTACAACGAAGCAAGAGGGAGAGGTCCCA...CTCTTTCCATGATCCTGGAGTCTTAGATTTCATCCTACTCGAAGTGAGGCTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CAA 90 bp | CTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGAAAGAGTCTACAGTCAGTCGGTTCTTCTaGAGGTGCAGTGCTACTACC | + |
Preference number: 5 (lower is better) Translates to: LHGCLPEHFVVCFEKESTVSRFF*RCSATT Trigger: GGTAGTAGCACTGCACCTCAAGAAGAACCGACTGAC...TGTAGACTCTTTCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 90 bp | GTAAGATCTTCTCTTCCACTGTCCCCTCACAGACAAACCTGTGTATaGCAACATCCTTCTTCTGTCCTACTCGGTAAATCCGGTCACAAG | + |
Preference number: 5 (lower is better) Translates to: VRSSLPLSPHRQTCV*QHPSSVLLGKSGHK Trigger: CTTGTGACCGGATTTACCGAGTAGGACAGAAGAAGGATGTTGTCATACACAGGTTTGTCTGTGAGGGGACAGTGGAAGAGAAGATCTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CAA 90 bp | CTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGAAAGAGTCTACAATTCTCTGTTTGGGGTaGACAGAGCCATCGATGGTG | + |
Preference number: 5 (lower is better) Translates to: LHGCLPEHFVVCFEKESTILCLG*TEPSMV Trigger: CACCATCGATGGCTCTGTCAACCCCAAACAGAGAAT...TGTAGACTCTTTCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 90 bp | CCCCTCCTTTCATTGAACCATTGTCAACCTGGCTCTTCCAAAGACTaGACTCATCAAATGGGGAGCAACGGAGAAACTTCATCAGTGAAT | + |
Preference number: 5 (lower is better) Translates to: PLLSLNHCQPGSSKD*THQMGSNGETSSVN Trigger: ATTCACTGATGAAGTTTCTCCGTTGCTCCCCATTTGATGAGTTCAGTCTTTGGAAGAGCCAGGTTGACAATGGTTCAATGAAAGGAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CAA 90 bp | AATGTACTCTGTGGCATAAACTGGCCTCTAACTCACAATCCCCACTCAGCCTTTAGCCTCCATTCTTTCTaGTCCTGTGGTAGAAACAAA | + |
Preference number: 5 (lower is better) Translates to: NVLCGINWPLTHNPHSAFSLHSF*SCGRNK Trigger: TTTGTTTCTACCACAGGACAAGAAAGAATGGAGGCT...AAAGGCTGAGTGGGGATTGTGAGTTAGAGGCCAGTTTATGCCACAGAGTACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 90 bp | GACAAGACTTCAGTGACCGATGCAGCTCATCTATGGCTTCACTCGTaGTTTTCCACACATTATAAAGATGATGTTGGTTCATATGGCCTC | + |
Preference number: 5 (lower is better) Translates to: DKTSVTDAAHLWLHS*FSTHYKDDVGSYGL Trigger: GAGGCCATATGAACCAACATCATCTTTATAATGTGTGGAAAATCACGAGTGAAGCCATAGATGAGCTGCATCGGTCACTGAAGTCTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CAA 90 bp | CATGCCAGGCTTAATTCTGAAATAACCAATGGGTTTCTATGGCCCACATTACACATCCTGCTGTTAGATTaGGGCTTCTGTTCTTTCCTT | + |
Preference number: 5 (lower is better) Translates to: HARLNSEITNGFLWPTLHILLLD*GFCSFL Trigger: AAGGAAAGAACAGAAGCCCAAATCTAACAGCAGGAT...GTGTAATGTGGGCCATAGAAACCCATTGGTTATTTCAGAATTAAGCCTGGCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CAA 90 bp | TTGTGGTTTGTTTTGAGAAAGAGTCTACAACAGGCCAAAGTGGACCTCTCCATCTCAGCTTTCTTAGTTTaGGGCTGGAACTTTGATTTC | + |
Preference number: 5 (lower is better) Translates to: LWFVLRKSLQQAKVDLSISAFLV*GWNFDF Trigger: GAAATCAAAGTTCCAGCCCAAAACTAAGAAAGCTGA...GATGGAGAGGTCCACTTTGGCCTGTTGTAGACTCTTTCTCAAAACAAACCACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CAA 90 bp | CATGCCAGGCTTAATTCTGAAATAACCAATGGGTTTCTATGGCCCACATTACACGAGCTGACCTTGACCTaGCAAGAAAGATGTCATAAA | + |
Preference number: 5 (lower is better) Translates to: HARLNSEITNGFLWPTLHELTLT*QERCHK Trigger: TTTATGACATCTTTCTTGCAAGGTCAAGGTCAGCTC...GTGTAATGTGGGCCATAGAAACCCATTGGTTATTTCAGAATTAAGCCTGGCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS-3UTR CAA 90 bp | AAGGCGTTTATTAAGACCATACCAATGATAACACAATGTGGTACAATGGCAGAAGACAATGACACTCTTTaGGGACCCTGGGCCTTTTTG | + |
Preference number: 5 (lower is better) Translates to: KAFIKTIPMITQCGTMAEDNDTL*GPWAFL Trigger: CAAAAAGGCCCAGGGTCCCAAAAGAGTGTCATTGTC...TTCTGCCATTGTACCACATTGTGTTATCATTGGTATGGTCTTAATAAACGCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS GCA 72 bp | GGCGAAGCCGCAGAAGCTGGGACAGGACATGGACGGTaGTGGGTCTTTGGGAGTCTGCCGCAGGGCAGCCCT | + |
Preference number: 6 (lower is better) Translates to: GEAAEAGTGHGR*WVFGSLPQGSP Trigger: AGGGCTGCCCTGCGGCAGACTCCCAAAGACCCAGCACCGTCCATGTCCTGTCCCAGCTTCTGCGGCTTCGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076941.12 ENSMUST00000151697.2 |
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CDS CCA 72 bp | GAAGCCGCAGAAGCTGGGACAGGACATGGACGGTGCTaGGTCTTTGGGAGTCTGCCGCAGGGCAGCCCTGGG | + |
Preference number: 6 (lower is better) Translates to: EAAEAGTGHGRC*VFGSLPQGSPG Trigger: CCCAGGGCTGCCCTGCGGCAGACTCCCAAAGACCCAGCACCGTCCATGTCCTGTCCCAGCTTCTGCGGCTTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076941.12 ENSMUST00000151697.2 |
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CDS CCA 72 bp | TGCTGGTGCTTCAGGAACAGGCCTCCAAGTCTTGGATaGTCCCTGGAGAGGCCCCTGAGCGAGCCCCCTCTG | + |
Preference number: 6 (lower is better) Translates to: CWCFRNRPPSLG*SLERPLSEPPL Trigger: CAGAGGGGGCTCGCTCAGGGGCCTCTCCAGGGACCATCCAAGACTTGGAGGCCTGTTCCTGAAGCACCAGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CCA 72 bp | AGAAGCTGGGACAGGACATGGACGGTGCTGGGTCTTTaGGAGTCTGCCGCAGGGCAGCCCTGGGACACACTG | + |
Preference number: 6 (lower is better) Translates to: RSWDRTWTVLGL*ESAAGQPWDTL Trigger: CAGTGTGTCCCAGGGCTGCCCTGCGGCAGACTCCCAAAGACCCAGCACCGTCCATGTCCTGTCCCAGCTTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076941.12 ENSMUST00000151697.2 |
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CDS CAA 72 bp | CAGAAGCTGGGACAGGACATGGACGGTGCTGGGTCTTaGGGAGTCTGCCGCAGGGCAGCCCTGGGACACACT | + |
Preference number: 6 (lower is better) Translates to: QKLGQDMDGAGS*GVCRRAALGHT Trigger: AGTGTGTCCCAGGGCTGCCCTGCGGCAGACTCCCAAAGACCCAGCACCGTCCATGTCCTGTCCCAGCTTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076941.12 ENSMUST00000151697.2 |
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CDS CCA 72 bp | GACGGGGCGTCTCTCACCGACTTCAGCAGAGAAAGATaGCAGCAGCACTGGCGAAGCCGCAGAAGCTGGGAC | + |
Preference number: 6 (lower is better) Translates to: DGASLTDFSRER*QQHWRSRRSWD Trigger: GTCCCAGCTTCTGCGGCTTCGCCAGTGCTGCTGCCATCTTTCTCTGCTGAAGTCGGTGAGAGACGCCCCGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151697.2 |
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CDS TCA 72 bp | CTCCAGTTCTGTGGGGTCCAGAGCCAGCCTTTTCCCTaGCGCAGGATCCCGGCTACAGCCGACTGTGGAGAT | + |
Preference number: 6 (lower is better) Translates to: LQFCGVQSQPFP*RRIPATADCGD Trigger: ATCTCCACAGTCGGCTGTAGCCGGGATCCTGCGTCAGGGAAAAGGCTGGCTCTGGACCCCACAGAACTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151697.2 |
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CDS CCA 72 bp | GAAAGATGGCAGCAGCACTGGCGAAGCCGCAGAAGCTaGGACAGGACATGGACGGTGCTGGGTCTTTGGGAG | + |
Preference number: 6 (lower is better) Translates to: ERWQQHWRSRRS*DRTWTVLGLWE Trigger: CTCCCAAAGACCCAGCACCGTCCATGTCCTGTCCCAGCTTCTGCGGCTTCGCCAGTGCTGCTGCCATCTTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076941.12 ENSMUST00000151697.2 |
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CDS TCA 72 bp | CCAACACCGCCAGCCAAGAGGGAGATCAGCATGACCTaGGGTCCCTGGGAGTGGTTAAATGCCTCCACCAGG | + |
Preference number: 6 (lower is better) Translates to: PTPPAKREISMT*GPWEWLNASTR Trigger: CCTGGTGGAGGCATTTAACCACTCCCAGGGACCTCAGGTCATGCTGATCTCCCTCTTGGCTGGCGGTGTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 72 bp | GCTGGCATCTACGTGCAGGCAGTGCTACCTCCACACTaGGGTTTGCTCCTGGGACCTCTCCCTCTTGCTTCG | + |
Preference number: 6 (lower is better) Translates to: AGIYVQAVLPPH*GLLLGPLPLAS Trigger: CGAAGCAAGAGGGAGAGGTCCCAGGAGCAAACCTCAGTGTGGAGGTAGCACTGCCTGCACGTAGATGCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151697.2 |
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CDS GCA 72 bp | GTGGGCCATTCCCGAGCAAAGCTCAGGTGCTGCTGGTaGTTCAGGAACAGGCCTCCAAGTCTTGGATGGTCC | + |
Preference number: 6 (lower is better) Translates to: VGHSRAKLRCCW*FRNRPPSLGWS Trigger: GGACCATCCAAGACTTGGAGGCCTGTTCCTGAAGCACCAGCAGCACCTGAGCTTTGCTCGGGAATGGCCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS GCA 72 bp | GGTGGCATGGTGGGCCATTCCCGAGCAAAGCTCAGGTaGTGCTGGTGCTTCAGGAACAGGCCTCCAAGTCTT | + |
Preference number: 6 (lower is better) Translates to: GGMVGHSRAKLR*CWCFRNRPPSL Trigger: AAGACTTGGAGGCCTGTTCCTGAAGCACCAGCAGCACCTGAGCTTTGCTCGGGAATGGCCCACCATGCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CCA 72 bp | AGAGCCGACTTCAGCAGAGAAAGATGGCAGCAGCACTaGCGAAGCCGCAGAAGCTGGGACAGGACATGGACG | + |
Preference number: 6 (lower is better) Translates to: RADFSRERWQQH*RSRRSWDRTWT Trigger: CGTCCATGTCCTGTCCCAGCTTCTGCGGCTTCGCCAGTGCTGCTGCCATCTTTCTCTGCTGAAGTCGGCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CCA 72 bp | GCCCGCTCGTCCTCAGAAAGCTTTAACCGGTGCAGCTaGCATCTACGTGCAGGCAGTGCTACCTCCACACTG | + |
Preference number: 6 (lower is better) Translates to: ARSSSESFNRCS*HLRAGSATSTL Trigger: CAGTGTGGAGGTAGCACTGCCTGCACGTAGATGCCAGCTGCACCGGTTAAAGCTTTCTGAGGACGAGCGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151697.2 |
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CDS CCA 72 bp | CTCACCGACTTCAGCAGAGAAAGATGGCAGCAGCACTaGCGAAGCCGCAGAAGCTGGGACAGGACATGGACG | + |
Preference number: 6 (lower is better) Translates to: LTDFSRERWQQH*RSRRSWDRTWT Trigger: CGTCCATGTCCTGTCCCAGCTTCTGCGGCTTCGCCAGTGCTGCTGCCATCTTTCTCTGCTGAAGTCGGTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151697.2 |
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CDS TCA 72 bp | GAGGTACCAAGTGGAGAGGGGCAGCAGCAGCTTTGGTaGTGTTGCTCTGCTCTGGTTCCTGAGCGCTGCACT | + |
Preference number: 6 (lower is better) Translates to: EVPSGEGQQQLW*CCSALVPERCT Trigger: AGTGCAGCGCTCAGGAACCAGAGCAGAGCAACATCACCAAAGCTGCTGCTGCCCCTCTCCACTTGGTACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CCA 72 bp | ATGGTGGGCCATTCCCGAGCAAAGCTCAGGTGCTGCTaGTGCTTCAGGAACAGGCCTCCAAGTCTTGGATGG | + |
Preference number: 6 (lower is better) Translates to: MVGHSRAKLRCC*CFRNRPPSLGW Trigger: CCATCCAAGACTTGGAGGCCTGTTCCTGAAGCACCAGCAGCACCTGAGCTTTGCTCGGGAATGGCCCACCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 72 bp | GCTCTGAGACATCGACCTTGGACAAGGTCAGAGCACTaGGCTGTTCTTCCAGGGACAGGACAAGGCCTTCGC | + |
Preference number: 6 (lower is better) Translates to: ALRHRPWTRSEH*AVLPGTGQGLR Trigger: GCGAAGGCCTTGTCCTGTCCCTGGAAGAACAGCTCAGTGCTCTGACCTTGTCCAAGGTCGATGTCTCAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076941.12 ENSMUST00000151697.2 |
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CDS GCA 72 bp | GCCTACTGGAAACACCATCATCTTCGCTGTCCTCACTaGTGGAGGTGGCATGGTGGGCCATTCCCGAGCAAA | + |
Preference number: 6 (lower is better) Translates to: AYWKHHHLRCPH*WRWHGGPFPSK Trigger: TTTGCTCGGGAATGGCCCACCATGCCACCTCCAGCAGTGAGGACAGCGAAGATGATGGTGTTTCCAGTAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS GCA 72 bp | TTGGGACCCTGGGCCTTTTTGGATCGCCTCCAGTTCTaGCAGCAGAGAAGACACCTTGGTGCTCCTTCGTGT | + |
Preference number: 6 (lower is better) Translates to: LGPWAFLDRLQF*QQRRHLGAPSC Trigger: ACACGAAGGAGCACCAAGGTGTCTTCTCTGCTGGCAGAACTGGAGGCGATCCAAAAAGGCCCAGGGTCCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS GCA 72 bp | TCTACGTGCAGGCAGTGCTACCTCCACACTGAGGTTTaGTCCTGGGACCTCTCCCTCTTGCTTCGTTGTAGG | + |
Preference number: 6 (lower is better) Translates to: STCRQCYLHTEV*SWDLSLLLRCR Trigger: CCTACAACGAAGCAAGAGGGAGAGGTCCCAGGAGCAAACCTCAGTGTGGAGGTAGCACTGCCTGCACGTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151697.2 |
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CDS CCA 72 bp | GCCCGCTCGTCCTCAGAAAGCTTTAACCGGTGCAGCTaGCATCTACGTGCAGGCAGTGCTACCAGAGGTTTA | + |
Preference number: 6 (lower is better) Translates to: ARSSSESFNRCS*HLRAGSATRGL Trigger: TAAACCTCTGGTAGCACTGCCTGCACGTAGATGCCAGCTGCACCGGTTAAAGCTTTCTGAGGACGAGCGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CAA 90 bp | GTTAGGTTTGCACGCTGGGCTGCTGGGTCAGAGGAATCTCCCTTCTaGGAAACACCTGAAGCAGCAGGCATCTGTCTCTGCACACTCTGG | + |
Preference number: 6 (lower is better) Translates to: VRFARWAAGSEESPF*ETPEAAGICLCTLW Trigger: CCAGAGTGTGCAGAGACAGATGCCTGCTGCTTCAGGTGTTTCCAAGAAGGGAGATTCCTCTGACCCAGCAGCCCAGCGTGCAAACCTAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CAA 90 bp | GTTGCTCTGCTCTGGTTCCTGAGCGCTGCACTTCTCTTTAGTTCCTaGTTCTGGGGAGAGAGCCAGAGCACTGAGTGCGTCCTCCAAAGC | + |
Preference number: 6 (lower is better) Translates to: VALLWFLSAALLFSS*FWGESQSTECVLQS Trigger: GCTTTGGAGGACGCACTCAGTGCTCTGGCTCTCTCCCCAGAACAAGGAACTAAAGAGAAGTGCAGCGCTCAGGAACCAGAGCAGAGCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 72 bp | CTCTGGCTTGTTCGGGACCCCTCGACTCTCACTCTCTaGCATGTGAGGACCCTTGGGTATTCCTTGAAGCAC | + |
Preference number: 6 (lower is better) Translates to: LWLVRDPSTLTL*HVRTLGYSLKH Trigger: GTGCTTCAAGGAATACCCAAGGGTCCTCACATGTCAGAGAGTGAGAGTCGAGGGGTCCCGAACAAGCCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 72 bp | GCAGGCATCTGTCTCTGCACACTCTGGTCAGAATGCTaGAGGCTCCCCTTCTTCTGTGAGTCCACAGTCGAG | + |
Preference number: 6 (lower is better) Translates to: AGICLCTLWSEC*RLPFFCESTVE Trigger: CTCGACTGTGGACTCACAGAAGAAGGGGAGCCTTCAGCATTCTGACCAGAGTGTGCAGAGACAGATGCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 72 bp | AGGTGCAGTGCTACTACCTGCAGCATGCTGGTCCACTaGGAGACAATGACACTCTTTTGGGACCCTGGGCCT | + |
Preference number: 6 (lower is better) Translates to: RCSATTCSMLVH*ETMTLFWDPGP Trigger: AGGCCCAGGGTCCCAAAAGAGTGTCATTGTCTCTCAGTGGACCAGCATGCTGCAGGTAGTAGCACTGCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 72 bp | AGCCATCGATGGTGGCGTAAGTCAGTCGGTTCTTCTTaGGGTGCAGTGCTACTACCTGCAGCATGCTGGTCC | + |
Preference number: 6 (lower is better) Translates to: SHRWWRKSVGSS*GAVLLPAACWS Trigger: GGACCAGCATGCTGCAGGTAGTAGCACTGCACCTCAAGAAGAACCGACTGACTTACGCCACCATCGATGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS GCA 72 bp | GGTGGCGTAAGTCAGTCGGTTCTTCTTGAGGTGCAGTaGTACTACCTGCAGCATGCTGGTCCACTGAGAGAC | + |
Preference number: 6 (lower is better) Translates to: GGVSQSVLLEVQ*YYLQHAGPLRD Trigger: GTCTCTCAGTGGACCAGCATGCTGCAGGTAGTAGCACTGCACCTCAAGAAGAACCGACTGACTTACGCCACC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CCA 72 bp | TACAGAGAGTTCTTTAGGGTTAGGATCCTGCCGCCATaGGACGTTTCCACACCACTGCTTCCCCTCCGCCTT | + |
Preference number: 6 (lower is better) Translates to: YREFFRVRILPP*DVSTPLLPLRL Trigger: AAGGCGGAGGGGAAGCAGTGGTGTGGAAACGTCCCATGGCGGCAGGATCCTAACCCTAAAGAACTCTCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CCA 72 bp | CCCCTCGACTCTCACTCTCTGACATGTGAGGACCCTTaGGTATTCCTTGAAGCACCTCTCCATGGCCTTGCT | + |
Preference number: 6 (lower is better) Translates to: PLDSHSLTCEDP*VFLEAPLHGLA Trigger: AGCAAGGCCATGGAGAGGTGCTTCAAGGAATACCCAAGGGTCCTCACATGTCAGAGAGTGAGAGTCGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CCA 72 bp | TACTGGAAACACCATCATCTTCGCTGTCCTCACTGCTaGAGGTGGCATGGTGGGCCATTCCCGAGCAAAGCT | + |
Preference number: 6 (lower is better) Translates to: YWKHHHLRCPHC*RWHGGPFPSKA Trigger: AGCTTTGCTCGGGAATGGCCCACCATGCCACCTCCAGCAGTGAGGACAGCGAAGATGATGGTGTTTCCAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CCA 72 bp | GGATCGCCTCCAGTTCTGCCAGCAGAGAAGACACCTTaGTGCTCCTTCGTGTGTCATCAAAAAGCTCCGCCT | + |
Preference number: 6 (lower is better) Translates to: GSPPVLPAEKTP*CSFVCHQKAPP Trigger: AGGCGGAGCTTTTTGATGACACACGAAGGAGCACCAAGGTGTCTTCTCTGCTGGCAGAACTGGAGGCGATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CAA 72 bp | CTCTGGTTCCTGAGCGCTGCACTTCTCTTTAGTTCCTaGTTCTGGGGAGAGAGCCAGAGCACTGAGTGCGTC | + |
Preference number: 6 (lower is better) Translates to: LWFLSAALLFSS*FWGESQSTECV Trigger: GACGCACTCAGTGCTCTGGCTCTCTCCCCAGAACAAGGAACTAAAGAGAAGTGCAGCGCTCAGGAACCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CAA 72 bp | AGGCTAACCGTGGGTGATGGCTCTGAGACATCGACCTaGGACAAGGTCAGAGCACTGAGCTGTTCTTCCAGG | + |
Preference number: 6 (lower is better) Translates to: RLTVGDGSETST*DKVRALSCSSR Trigger: CCTGGAAGAACAGCTCAGTGCTCTGACCTTGTCCAAGGTCGATGTCTCAGAGCCATCACCCACGGTTAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CAA 72 bp | TGGATCGCCTCCAGTTCTGCCAGCAGAGAAGACACCTaGGTGCTCCTTCGTGTGTCATCAAAAAGCTCCGCC | + |
Preference number: 6 (lower is better) Translates to: WIASSSASREDT*VLLRVSSKSSA Trigger: GGCGGAGCTTTTTGATGACACACGAAGGAGCACCAAGGTGTCTTCTCTGCTGGCAGAACTGGAGGCGATCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CAA 90 bp | GTTGTTCTGAATGGGGGTTCCAGTGACAGCCCACCGGGCCTGGGCTaGGAGCTTACACACAGCAATGGATGTCTGTACTCGAGGGTTTTT | + |
Preference number: 6 (lower is better) Translates to: VVLNGGSSDSPPGLG*ELTHSNGCLYSRVF Trigger: AAAAACCCTCGAGTACAGACATCCATTGCTGTGTGTAAGCTCCAAGCCCAGGCCCGGTGGGCTGTCACTGGAACCCCCATTCAGAACAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CAA 90 bp | GTGCCATTAAGGCTAACCGTGGGTGATGGCTCTGAGACATCGACCTaGGACAAGGTCAGAGCACTGAGCTGTTCTTCCAGGGACAGGACA | + |
Preference number: 6 (lower is better) Translates to: VPLRLTVGDGSETST*DKVRALSCSSRDRT Trigger: TGTCCTGTCCCTGGAAGAACAGCTCAGTGCTCTGACCTTGTCCAAGGTCGATGTCTCAGAGCCATCACCCACGGTTAGCCTTAATGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CAA 90 bp | GGTCCACTGAGAGACAATGACACTCTTTTGGGACCCTGGGCCTTTTaGGATCGCCTCCAGTTCTGCCAGCAGAGAAGACACCTTGGTGCT | + |
Preference number: 6 (lower is better) Translates to: GPLRDNDTLLGPWAF*DRLQFCQQRRHLGA Trigger: AGCACCAAGGTGTCTTCTCTGCTGGCAGAACTGGAGGCGATCCAAAAAGGCCCAGGGTCCCAAAAGAGTGTCATTGTCTCTCAGTGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CAA 90 bp | TACTACCTGCAGCATGCTGGTCCACTGAGAGACAATGACACTCTTTaGGGACCCTGGGCCTTTTTGGATCGCCTCCAGTTCTGCCAGCAG | + |
Preference number: 6 (lower is better) Translates to: YYLQHAGPLRDNDTL*GPWAFLDRLQFCQQ Trigger: CTGCTGGCAGAACTGGAGGCGATCCAAAAAGGCCCAGGGTCCCAAAAGAGTGTCATTGTCTCTCAGTGGACCAGCATGCTGCAGGTAGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 72 bp | GTCACCTCCAGACTGTCTAGTTGCCACCAGGTCAGATaGGGGGTCCTTCTCCATCCTGCTGTTAGATTTGGG | + |
Preference number: 6 (lower is better) Translates to: VTSRLSSCHQVR*GVLLHPAVRFG Trigger: CCCAAATCTAACAGCAGGATGGAGAAGGACCCCTCATCTGACCTGGTGGCAACTAGACAGTCTGGAGGTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 72 bp | ACTCTGGTCAGAATGCTGAAGGCTCCCCTTCTTCTGTaGGTCCACAGTCGAGTCAAAGAGAAGTGGGGACCC | + |
Preference number: 6 (lower is better) Translates to: TLVRMLKAPLLL*VHSRVKEKWGP Trigger: GGGTCCCCACTTCTCTTTGACTCGACTGTGGACTCACAGAAGAAGGGGAGCCTTCAGCATTCTGACCAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 72 bp | TGCTGGGTCAGAGGAATCTCCCTTCTTGGAAACACCTaGAGCAGCAGGCATCTGTCTCTGCACACTCTGGTC | + |
Preference number: 6 (lower is better) Translates to: CWVRGISLLGNT*SSRHLSLHTLV Trigger: GACCAGAGTGTGCAGAGACAGATGCCTGCTGCTTCAGGTGTTTCCAAGAAGGGAGATTCCTCTGACCCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS GCA 72 bp | GCCAGAGCACTGAGTGCGTCCTCCAAAGCCTGGATTTaGTTAAGCAACTTCTCACCCTTATCAGGGAGAGCC | + |
Preference number: 6 (lower is better) Translates to: ARALSASSKAWI*LSNFSPLSGRA Trigger: GGCTCTCCCTGATAAGGGTGAGAAGTTGCTTAAGCAAATCCAGGCTTTGGAGGACGCACTCAGTGCTCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CCA 72 bp | CCTGCTGACGTGTCCCTCTTTCTGGACCTTGCTTTCTaGGTTCTGACCAGGAACACTTGGCACCAAAAGCTG | + |
Preference number: 6 (lower is better) Translates to: PADVSLFLDLAF*VLTRNTWHQKL Trigger: CAGCTTTTGGTGCCAAGTGTTCCTGGTCAGAACCCAGAAAGCAAGGTCCAGAAAGAGGGACACGTCAGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CCA 72 bp | CCCACCGGGCCTGGGCTTGGAGCTTACACACAGCAATaGATGTCTGTACTCGAGGGTTTTTCACGTTATGAG | + |
Preference number: 6 (lower is better) Translates to: PTGPGLGAYTQQ*MSVLEGFSRYE Trigger: CTCATAACGTGAAAAACCCTCGAGTACAGACATCCATTGCTGTGTGTAAGCTCCAAGCCCAGGCCCGGTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CCA 72 bp | GAGACAATGACACTCTTTTGGGACCCTGGGCCTTTTTaGATCGCCTCCAGTTCTGCCAGCAGAGAAGACACC | + |
Preference number: 6 (lower is better) Translates to: ETMTLFWDPGPF*IASSSASREDT Trigger: GGTGTCTTCTCTGCTGGCAGAACTGGAGGCGATCCAAAAAGGCCCAGGGTCCCAAAAGAGTGTCATTGTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CAA 90 bp | GGATGTTCACTGCAGCCAGGGTACCCTTCTTTTGTTTCAGCTGTGTaGTTAGGTTTGCACGCTGGGCTGCTGGGTCAGAGGAATCTCCCT | + |
Preference number: 6 (lower is better) Translates to: GCSLQPGYPSFVSAV*LGLHAGLLGQRNLP Trigger: AGGGAGATTCCTCTGACCCAGCAGCCCAGCGTGCAAACCTAACAACACAGCTGAAACAAAAGAAGGGTACCCTGGCTGCAGTGAACATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 72 bp | AAATGGGTTTCTCGGCTGGCTGGGAGAGTGAAGCTGTaGCTCAGATGGCTGCTGAGGCTTACTGGTTACAGA | + |
Preference number: 6 (lower is better) Translates to: KWVSRLAGRVKL*LRWLLRLTGYR Trigger: TCTGTAACCAGTAAGCCTCAGCAGCCATCTGAGTCACAGCTTCACTCTCCCAGCCAGCCGAGAAACCCATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 72 bp | GGGACACACTGGATCCAAACTCCTGAGCCACTCTACTaGATGGATTATCAGGGCTTCTTCCATGGTGGCTGC | + |
Preference number: 6 (lower is better) Translates to: GTHWIQTPEPLY*MDYQGFFHGGC Trigger: GCAGCCACCATGGAAGAAGCCCTGATAATCCATTCAGTAGAGTGGCTCAGGAGTTTGGATCCAGTGTGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076941.12 ENSMUST00000151697.2 |
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CDS TCA 72 bp | CTACTACCTGCAGCATGCTGGTCCACTGAGAGACAATaGCACTCTTTTGGGACCCTGGGCCTTTTTGGATCG | + |
Preference number: 6 (lower is better) Translates to: LLPAACWSTERQ*HSFGTLGLFGS Trigger: CGATCCAAAAAGGCCCAGGGTCCCAAAAGAGTGTCATTGTCTCTCAGTGGACCAGCATGCTGCAGGTAGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CCA 72 bp | CCTCATGCAATAAACAGTGAGAAACAGGAATATCGGTaGCCTGCACGAAGCCGCATGTGTTCGTCCGGCACA | + |
Preference number: 6 (lower is better) Translates to: PHAINSEKQEYR*PARSRMCSSGT Trigger: TGTGCCGGACGAACACATGCGGCTTCGTGCAGGCCACCGATATTCCTGTTTCTCACTGTTTATTGCATGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CAA 72 bp | AGCCAGAGCACTGAGTGCGTCCTCCAAAGCCTGGATTaGCTTAAGCAACTTCTCACCCTTATCAGGGAGAGC | + |
Preference number: 6 (lower is better) Translates to: SQSTECVLQSLD*LKQLLTLIRES Trigger: GCTCTCCCTGATAAGGGTGAGAAGTTGCTTAAGCAAATCCAGGCTTTGGAGGACGCACTCAGTGCTCTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CAA 72 bp | AGAGACAATGACACTCTTTTGGGACCCTGGGCCTTTTaGGATCGCCTCCAGTTCTGCCAGCAGAGAAGACAC | + |
Preference number: 6 (lower is better) Translates to: RDNDTLLGPWAF*DRLQFCQQRRH Trigger: GTGTCTTCTCTGCTGGCAGAACTGGAGGCGATCCAAAAAGGCCCAGGGTCCCAAAAGAGTGTCATTGTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CAA 90 bp | GGGCCTTTTTGGATCGCCTCCAGTTCTGCCAGCAGAGAAGACACCTaGGTGCTCCTTCGTGTGTCATCAAAAAGCTCCGCCTTGAAACAT | + |
Preference number: 6 (lower is better) Translates to: GPFWIASSSASREDT*VLLRVSSKSSALKH Trigger: ATGTTTCAAGGCGGAGCTTTTTGATGACACACGAAGGAGCACCAAGGTGTCTTCTCTGCTGGCAGAACTGGAGGCGATCCAAAAAGGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CAA 90 bp | GTCCCTCTTTCTGGACCTTGCTTTCTGGGTTCTGACCAGGAACACTaGGCACCAAAAGCTGGGTTTCCTTTTCTCTCAGAGTCTCTGGCT | + |
Preference number: 6 (lower is better) Translates to: VPLSGPCFLGSDQEH*APKAGFPFLSESLA Trigger: AGCCAGAGACTCTGAGAGAAAAGGAAACCCAGCTTTTGGTGCCAAGTGTTCCTGGTCAGAACCCAGAAAGCAAGGTCCAGAAAGAGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CAA 90 bp | GAAGACACCTTGGTGCTCCTTCGTGTGTCATCAAAAAGCTCCGCCTaGAAACATGTGCCATTAAGGCTAACCGTGGGTGATGGCTCTGAG | + |
Preference number: 6 (lower is better) Translates to: EDTLVLLRVSSKSSA*KHVPLRLTVGDGSE Trigger: CTCAGAGCCATCACCCACGGTTAGCCTTAATGGCACATGTTTCAAGGCGGAGCTTTTTGATGACACACGAAGGAGCACCAAGGTGTCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS GCA 72 bp | CTTCTCACCCTTATCAGGGAGAGCCTGGATGTTCACTaGAGCCAGGGTACCCTTCTTTTGTTTCAGCTGTGT | + |
Preference number: 6 (lower is better) Translates to: LLTLIRESLDVH*SQGTLLLFQLC Trigger: ACACAGCTGAAACAAAAGAAGGGTACCCTGGCTGCAGTGAACATCCAGGCTCTCCCTGATAAGGGTGAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CCA 72 bp | CACACTGGATCCAAACTCCTGAGCCACTCTACTGAATaGATTATCAGGGCTTCTTCCATGGTGGCTGCCTCT | + |
Preference number: 6 (lower is better) Translates to: HTGSKLLSHSTE*IIRASSMVAAS Trigger: AGAGGCAGCCACCATGGAAGAAGCCCTGATAATCCATTCAGTAGAGTGGCTCAGGAGTTTGGATCCAGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076941.12 ENSMUST00000151697.2 |
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CDS TCA 72 bp | TTCTGCTACTGCTGTTTCACCCGGACAAGACTTCAGTaGCCGATGCAGCTCATCTATGGCTTCACTCGTGAT | + |
Preference number: 6 (lower is better) Translates to: FCYCCFTRTRLQ*PMQLIYGFTRD Trigger: ATCACGAGTGAAGCCATAGATGAGCTGCATCGGTCACTGAAGTCTTGTCCGGGTGAAACAGCAGTAGCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 72 bp | TTGCTGGTTACACGTTTCTCTACTTCGTTCTTCCAGTaGTGGATCAGGGAAGCGGGGCAGACGATCAGTGTT | + |
Preference number: 6 (lower is better) Translates to: LLVTRFSTSFFQ*WIREAGQTISV Trigger: AACACTGATCGTCTGCCCCGCTTCCCTGATCCATCACTGGAAGAACGAAGTAGAGAAACGTGTAACCAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 72 bp | GCCGACTCCGGTTTGGCCCATGGTAGAGATAGATTCTaGGTCTGTTGCTGGTTACACGTTTCTCTACTTCGT | + |
Preference number: 6 (lower is better) Translates to: ADSGLAHGRDRF*VCCWLHVSLLR Trigger: ACGAAGTAGAGAAACGTGTAACCAGCAACAGACTCAGAATCTATCTCTACCATGGGCCAAACCGGAGTCGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS GCA 72 bp | ACTGCTGTTTCACCCGGACAAGACTTCAGTGACCGATaGAGCTCATCTATGGCTTCACTCGTGATTTTCCAC | + |
Preference number: 6 (lower is better) Translates to: TAVSPGQDFSDR*SSSMASLVIFH Trigger: GTGGAAAATCACGAGTGAAGCCATAGATGAGCTGCATCGGTCACTGAAGTCTTGTCCGGGTGAAACAGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CCA 72 bp | GGCAGTGCTACCAGAGGTTTACCAGTGGAATCCAGCTaGTCTTTTGTTCTCCTCAGCAAAAGGCTCTTGGTT | + |
Preference number: 6 (lower is better) Translates to: GSATRGLPVESS*SFVLLSKRLLV Trigger: AACCAAGAGCCTTTTGCTGAGGAGAACAAAAGACCAGCTGGATTCCACTGGTAAACCTCTGGTAGCACTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CAA 72 bp | TCTGGACCTTGCTTTCTGGGTTCTGACCAGGAACACTaGGCACCAAAAGCTGGGTTTCCTTTTCTCTCAGAG | + |
Preference number: 6 (lower is better) Translates to: SGPCFLGSDQEH*APKAGFPFLSE Trigger: CTCTGAGAGAAAAGGAAACCCAGCTTTTGGTGCCAAGTGTTCCTGGTCAGAACCCAGAAAGCAAGGTCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CAA 90 bp | CAGACGATCAGTGTTCCACTGGAAGTAAAGACAGAGGAGTCATTCTaGGAAAGCCACGTCACAGGCTCGCTTCTCTCCTTTTCCTTGCTT | + |
Preference number: 6 (lower is better) Translates to: QTISVPLEVKTEESF*ESHVTGSLLSFSLL Trigger: AAGCAAGGAAAAGGAGAGAAGCGAGCCTGTGACGTGGCTTTCCAAGAATGACTCCTCTGTCTTTACTTCCAGTGGAACACTGATCGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 72 bp | CTCGAGGGTTTTTCACGTTATGAGCTTCATCCAAAATaGTCCGAGCCCAGACTACCTGAAGCAAAGGTGCTG | + |
Preference number: 6 (lower is better) Translates to: LEGFSRYELHPK*SEPRLPEAKVL Trigger: CAGCACCTTTGCTTCAGGTAGTCTGGGCTCGGATCATTTTGGATGAAGCTCATAACGTGAAAAACCCTCGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 72 bp | TACTCGGTAAATCCGGTCACAAGCTTGGTCTTCAAGTaGGGGATTCCAGTGCATGTCCAGAAGGAAAAGGTG | + |
Preference number: 6 (lower is better) Translates to: YSVNPVTSLVFK*GIPVHVQKEKV Trigger: CACCTTTTCCTTCTGGACATGCACTGGAATCCCTCACTTGAAGACCAAGCTTGTGACCGGATTTACCGAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CCA 72 bp | TTCTTTTGTTTCAGCTGTGTTGTTAGGTTTGCACGCTaGGCTGCTGGGTCAGAGGAATCTCCCTTCTTGGAA | + |
Preference number: 6 (lower is better) Translates to: FFCFSCVVRFAR*AAGSEESPFLE Trigger: TTCCAAGAAGGGAGATTCCTCTGACCCAGCAGCCCAGCGTGCAAACCTAACAACACAGCTGAAACAAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CCA 72 bp | ATACGTAGAGAGTACTTTTGCGTGCCGACTCCGGTTTaGCCCATGGTAGAGATAGATTCTGAGTCTGTTGCT | + |
Preference number: 6 (lower is better) Translates to: IRREYFCVPTPV*PMVEIDSESVA Trigger: AGCAACAGACTCAGAATCTATCTCTACCATGGGCCAAACCGGAGTCGGCACGCAAAAGTACTCTCTACGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CAA 72 bp | AGTGTTCCACTGGAAGTAAAGACAGAGGAGTCATTCTaGGAAAGCCACGTCACAGGCTCGCTTCTCTCCTTT | + |
Preference number: 6 (lower is better) Translates to: SVPLEVKTEESF*ESHVTGSLLSF Trigger: AAAGGAGAGAAGCGAGCCTGTGACGTGGCTTTCCAAGAATGACTCCTCTGTCTTTACTTCCAGTGGAACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CAA 72 bp | TTGGTGCTCCTTCGTGTGTCATCAAAAAGCTCCGCCTaGAAACATGTGCCATTAAGGCTAACCGTGGGTGAT | + |
Preference number: 6 (lower is better) Translates to: LVLLRVSSKSSA*KHVPLRLTVGD Trigger: ATCACCCACGGTTAGCCTTAATGGCACATGTTTCAAGGCGGAGCTTTTTGATGACACACGAAGGAGCACCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CAA 90 bp | TCTCCATGGCCTTGCTTGGAAGCCATTCCTTCAGCTTTCTTAGTTTaGGGCTGGAACTTTGATTTCTCTTGTTCTTCCCTGTCACCTCCA | + |
Preference number: 6 (lower is better) Translates to: SPWPCLEAIPSAFLV*GWNFDFSCSSLSPP Trigger: TGGAGGTGACAGGGAAGAACAAGAGAAATCAAAGTTCCAGCCCAAAACTAAGAAAGCTGAAGGAATGGCTTCCAAGCAAGGCCATGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CAA 90 bp | CAGGCAGTGCTACCAGAGGTTTACCAGTGGAATCCAGCTGGTCTTTaGTTCTCCTCAGCAAAAGGCTCTTGGTTAAAATGCTTAACCGTT | + |
Preference number: 6 (lower is better) Translates to: QAVLPEVYQWNPAGL*FSSAKGSWLKCLTV Trigger: AACGGTTAAGCATTTTAACCAAGAGCCTTTTGCTGAGGAGAACAAAAGACCAGCTGGATTCCACTGGTAAACCTCTGGTAGCACTGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 72 bp | TCTCTTCCACTGTCCCCTCACAGACAAACCTGTGTATaGCAACATCCTTCTTCTGTCCTACTCGGTAAATCC | + |
Preference number: 6 (lower is better) Translates to: SLPLSPHRQTCV*QHPSSVLLGKS Trigger: GGATTTACCGAGTAGGACAGAAGAAGGATGTTGTCATACACAGGTTTGTCTGTGAGGGGACAGTGGAAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS GCA 72 bp | AGTAGTAATCACGATGTCATACGTAGAGAGTACTTTTaGGTGCCGACTCCGGTTTGGCCCATGGTAGAGATA | + |
Preference number: 6 (lower is better) Translates to: SSNHDVIRREYF*VPTPVWPMVEI Trigger: TATCTCTACCATGGGCCAAACCGGAGTCGGCACGCAAAAGTACTCTCTACGTATGACATCGTGATTACTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CCA 72 bp | AACCGTTCCCCTCCTTTCATTGAACCATTGTCAACCTaGCTCTTCCAAAGACTGAACTCATCAAATGGGGAG | + |
Preference number: 6 (lower is better) Translates to: NRSPPFIEPLST*LFQRLNSSNGE Trigger: CTCCCCATTTGATGAGTTCAGTCTTTGGAAGAGCCAGGTTGACAATGGTTCAATGAAAGGAGGGGAACGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CAA 72 bp | ACCCTTGGGTATTCCTTGAAGCACCTCTCCATGGCCTaGCTTGGAAGCCATTCCTTCAGCTTTCTTAGTTTT | + |
Preference number: 6 (lower is better) Translates to: TLGYSLKHLSMA*LGSHSFSFLSF Trigger: AAAACTAAGAAAGCTGAAGGAATGGCTTCCAAGCAAGGCCATGGAGAGGTGCTTCAAGGAATACCCAAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 72 bp | CTCCATTCTTTCTTGTCCTGTGGTAGAAACAAACCCTaGAGCTCGACCACAAACTCCTCATGCAATAAACAG | + |
Preference number: 6 (lower is better) Translates to: LHSFLSCGRNKP*SSTTNSSCNKQ Trigger: CTGTTTATTGCATGAGGAGTTTGTGGTCGAGCTTCAGGGTTTGTTTCTACCACAGGACAAGAAAGAATGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS TCA 72 bp | TCATTGAACCATTGTCAACCTGGCTCTTCCAAAGACTaGACTCATCAAATGGGGAGCAACGGAGAAACTTCA | + |
Preference number: 6 (lower is better) Translates to: SLNHCQPGSSKD*THQMGSNGETS Trigger: TGAAGTTTCTCCGTTGCTCCCCATTTGATGAGTTCAGTCTTTGGAAGAGCCAGGTTGACAATGGTTCAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CAA 72 bp | CCTTGCTTGGAAGCCATTCCTTCAGCTTTCTTAGTTTaGGGCTGGAACTTTGATTTCTCTTGTTCTTCCCTG | + |
Preference number: 6 (lower is better) Translates to: PCLEAIPSAFLV*GWNFDFSCSSL Trigger: CAGGGAAGAACAAGAGAAATCAAAGTTCCAGCCCAAAACTAAGAAAGCTGAAGGAATGGCTTCCAAGCAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CAA 72 bp | AAAATGCTTAACCGTTCCCCTCCTTTCATTGAACCATaGTCAACCTGGCTCTTCCAAAGACTGAACTCATCA | + |
Preference number: 6 (lower is better) Translates to: KMLNRSPPFIEP*STWLFQRLNSS Trigger: TGATGAGTTCAGTCTTTGGAAGAGCCAGGTTGACAATGGTTCAATGAAAGGAGGGGAACGGTTAAGCATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |
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CDS CAA 72 bp | ACCTTCTTCGACAAACTGTTTTCGTTCGAGTGTTTTTaGATTCTTGTTAAGCACCCTAAATGGGTTTCTCGG | + |
Preference number: 6 (lower is better) Translates to: TFFDKLFSFECF*ILVKHPKWVSR Trigger: CCGAGAAACCCATTTAGGGTGCTTAACAAGAATCAAAAAACACTCGAACGAAAACAGTTTGTCGAAGAAGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076941.12 |