RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTF2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000033222

Ensembl transcript IDs: ENSMUST00000076941.12, ENSMUST00000151697.2

Found 249 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACACGGTCTCATTCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTaGCATAAACTGGCCTCTAACTCACAATCCCCACTCAGCCTTTCA +
Preference number: 1 (lower is better)
Translates to: TRSHSVAQAGLKCTL*HKLASNSQSPLSLS
Trigger: TGAAAGGCTGAGTGGGGATTGTGAGTTAGAGGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGAATGAGACCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
3UTR-3UTR CCA 90 bp TACAAGACGCAGCCTGCCAGCAGGGAAACAGGACAGAGCCTACATAGGCAAGGTCTCTGTGGCATAAACTaGCCTCTAACTCACAATCCC +
Preference number: 2 (lower is better)
Translates to: YKTQPASRETGQSLHRQGLCGIN*PLTHNP
Trigger: GGGATTGTGAGTTAGAGGCCAGTTTATGCCACAGAG...ACCTTGCCTATGTAGGCTCTGTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
3UTR-3UTR GCA 90 bp TCTCATTCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCACTCAGCCTTTCAGGTaGTGGGAAGTATGGACTACA +
Preference number: 2 (lower is better)
Translates to: SHSVAQAGLKCTLWHKLATQPFR*WEVWTT
Trigger: TGTAGTCCATACTTCCCAGCACCTGAAAGGCTGAGT...GGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGAATGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
3UTR-3UTR CCA 90 bp TCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCTCTAACGAAGTATGGACTACATaGCTGCCTTCCAGAGCACTT +
Preference number: 2 (lower is better)
Translates to: SVAQAGLKCTLWHKLASNEVWTT*LPSRAL
Trigger: AAGTGCTCTGGAAGGCAGCCATGTAGTCCATACTTC...GTTAGAGGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
3UTR CAA 90 bp CAGGTGCTGGGAAGTATGGACTACATGGCTGCCTTCCAGAGCACTTaGTGGTTTGTTTTGAGAAAGAGTCTACAACAGGCCAAAGTGGAC +
Preference number: 2 (lower is better)
Translates to: QVLGSMDYMAAFQST*WFVLRKSLQQAKVD
Trigger: GTCCACTTTGGCCTGTTGTAGACTCTTTCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAGTCCATACTTCCCAGCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
3UTR-3UTR TCA 90 bp TACAAGACGCAGCCTGCCAGCAGGGAAACAGGACAGAGCCTACATAGGCAAGGTATTACACAAGCTGACTaGCTAACTGGTTTGTTAACC +
Preference number: 2 (lower is better)
Translates to: YKTQPASRETGQSLHRQGITQAD*LTGLLT
Trigger: GGTTAACAAACCAGTTAGTCAGTCAGCTTGTGTAAT...ACCTTGCCTATGTAGGCTCTGTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
3UTR CAA 90 bp CTCACTGTTACCCAGGCTAACCTTAGACTCGAGATCCTCTTGCCTTaGCCTACAAAGTGCCAGCATTCTAAGCATGTGTCACTATGCTTG +
Preference number: 2 (lower is better)
Translates to: LTVTQANLRLEILLP*PTKCQHSKHVSLCL
Trigger: CAAGCATAGTGACACATGCTTAGAATGCTGGCACTTTGTAGGCAAAGGCAAGAGGATCTCGAGTCTAAGGTTAGCCTGGGTAACAGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
3UTR-3UTR GCA 90 bp GACTCGAGATCCTCTTGCCTTTGCCTACAAAGTGCCAGCATTCTAAGCATGTGTACCTCTCCATCTTCTTaGTGGATTACAGGCATGCAC +
Preference number: 2 (lower is better)
Translates to: DSRSSCLCLQSASILSMCTSPSS*WITGMH
Trigger: GTGCATGCCTGTAATCCAGCAAGAAGATGGAGAGGT...ACACATGCTTAGAATGCTGGCACTTTGTAGGCAAAGGCAAGAGGATCTCGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
3UTR-3UTR CCA 90 bp GATGTTGATATATCCCTAAATGAAACCATGATGCACAGGCTAAATGAGAGATGCCATCAGTCCCAAACATaGCAGCACAGGGCTTTGAGG +
Preference number: 2 (lower is better)
Translates to: DVDISLNETMMHRLNERCHQSQT*QHRALR
Trigger: CCTCAAAGCCCTGTGCTGCCATGTTTGGGACTGATG...GCATCTCTCATTTAGCCTGTGCATCATGGTTTCATTTAGGGATATATCAACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
3UTR-3UTR CCA 90 bp GATGTTGATATATCCCTAAATGAAACCATGATGCACAGGCTAAATGAGAGATGCCAGCCTTTCAGGTGCTaGGAAGTATGGACTACATGG +
Preference number: 2 (lower is better)
Translates to: DVDISLNETMMHRLNERCQPFRC*EVWTTW
Trigger: CCATGTAGTCCATACTTCCCAGCACCTGAAAGGCTG...GCATCTCTCATTTAGCCTGTGCATCATGGTTTCATTTAGGGATATATCAACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
3UTR-3UTR GCA 90 bp GATGTTGATATATCCCTAAATGAAACCATGATGCACAGGCTAAATGAGAGATGCTATGGACTACATGGCTaGCTTCCAGAGCACTTTGTG +
Preference number: 2 (lower is better)
Translates to: DVDISLNETMMHRLNERCYGLHG*LPEHFV
Trigger: CACAAAGTGCTCTGGAAGGCAGCCATGTAGTCCATA...GCATCTCTCATTTAGCCTGTGCATCATGGTTTCATTTAGGGATATATCAACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
3UTR-3UTR CCA 90 bp GATGTTGATATATCCCTAAATGAAACCATGATGCACAGGCTAAATGAGAGATGCTACAACAGGCCAAAGTaGACCTCTCCATCTTCTTGC +
Preference number: 2 (lower is better)
Translates to: DVDISLNETMMHRLNERCYNRPK*TSPSSC
Trigger: GCAAGAAGATGGAGAGGTCCACTTTGGCCTGTTGTA...GCATCTCTCATTTAGCCTGTGCATCATGGTTTCATTTAGGGATATATCAACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
3UTR-3UTR GCA 90 bp GATGTTGATATATCCCTAAATGAAACCATGATGCACAGGCTAAATGAGAGATGCAGATCCTCTTGCCTTTaGCTACAAAGTGCCAGCATT +
Preference number: 2 (lower is better)
Translates to: DVDISLNETMMHRLNERCRSSCL*LQSASI
Trigger: AATGCTGGCACTTTGTAGGCAAAGGCAAGAGGATCT...GCATCTCTCATTTAGCCTGTGCATCATGGTTTCATTTAGGGATATATCAACATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
3UTR-3UTR TCA 90 bp GATGTTGATATATCCCTAAATGAAACCATGATGCACAGGCTAAATGAGAGATGCCTTTGTGGTTTGTTTTaGGAAAGAGTCTACAACAGG +
Preference number: 2 (lower is better)
Translates to: DVDISLNETMMHRLNERCLCGLF*ERVYNR
Trigger: CCTGTTGTAGACTCTTTCTCAAAACAAACCACAAAG...GCATCTCTCATTTAGCCTGTGCATCATGGTTTCATTTAGGGATATATCAACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
3UTR-3UTR GCA 90 bp AAGGCGTTTATTAAGACCATACCAATGATAACACAATGTGGTACAATGGCAGAAACACAACAGATTAAATaGCACTGGCAACTGAAATGG +
Preference number: 2 (lower is better)
Translates to: KAFIKTIPMITQCGTMAETQQIK*HWQLKW
Trigger: CCATTTCAGTTGCCAGTGGCATTTAATCTGTTGTGT...TTCTGCCATTGTACCACATTGTGTTATCATTGGTATGGTCTTAATAAACGCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
3UTR TCA 72 bp TCCGCCATCAGTCCCAAACATGGCAGCACAGGGCTTTaGGGCTGTTTGACAGACAGGGTCTTCCCATGTAAT +
Preference number: 3 (lower is better)
Translates to: SAISPKHGSTGL*GCLTDRVFPCN
Trigger: ATTACATGGGAAGACCCTGTCTGTCAAACAGCCTCAAAGCCCTGTGCTGCCATGTTTGGGACTGATGGCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
3UTR CCA 72 bp ACAATCCCCACTCAGCCTTTCAGGTGCTGGGAAGTATaGACTACATGGCTGCCTTCCAGAGCACTTTGTGGT +
Preference number: 3 (lower is better)
Translates to: TIPTQPFRCWEV*TTWLPSRALCG
Trigger: ACCACAAAGTGCTCTGGAAGGCAGCCATGTAGTCCATACTTCCCAGCACCTGAAAGGCTGAGTGGGGATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
3UTR TCA 72 bp GTCCCAAACATGGCAGCACAGGGCTTTGAGGCTGTTTaGCAGACAGGGTCTTCCCATGTAATTAAGGCTGCT +
Preference number: 3 (lower is better)
Translates to: VPNMAAQGFEAV*QTGSSHVIKAA
Trigger: AGCAGCCTTAATTACATGGGAAGACCCTGTCTGTCAAACAGCCTCAAAGCCCTGTGCTGCCATGTTTGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
3UTR CCA 72 bp CATTCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTaGCATAAACTGGCCTCTAACTCACAATCCCCACTC +
Preference number: 3 (lower is better)
Translates to: HSVAQAGLKCTL*HKLASNSQSPL
Trigger: GAGTGGGGATTGTGAGTTAGAGGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
3UTR TCA 72 bp ACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTaGGAAAGAGTCTACAACAGGCCAAAGTGGACCTCT +
Preference number: 3 (lower is better)
Translates to: TWLPSRALCGLF*ERVYNRPKWTS
Trigger: AGAGGTCCACTTTGGCCTGTTGTAGACTCTTTCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
3UTR CCA 72 bp AGTATGGACTACATGGCTGCCTTCCAGAGCACTTTGTaGTTTGTTTTGAGAAAGAGTCTACAACAGGCCAAA +
Preference number: 3 (lower is better)
Translates to: SMDYMAAFQSTL*FVLRKSLQQAK
Trigger: TTTGGCCTGTTGTAGACTCTTTCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAGTCCATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR TCA 90 bp TACAAGACGCAGCCTGCCAGCAGGGAAACAGGACAGAGCCTACATAGGCAAGGTGAATGGGGGTTCCAGTaGCAGCCCACCGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: YKTQPASRETGQSLHRQGEWGFQ*QPTGPG
Trigger: CCCAGGCCCGGTGGGCTGTCACTGGAACCCCCATTC...ACCTTGCCTATGTAGGCTCTGTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR GCA 90 bp CCCCACTCAGCCTTTCAGGTGCTGGGAAGTATGGACTACATGGCTGCCTTCCAGGGGTCTTTGGGAGTCTaGCGCAGGGCAGCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: PHSAFQVLGSMDYMAAFQGSLGV*RRAALG
Trigger: TCCCAGGGCTGCCCTGCGGCAGACTCCCAAAGACCC...CTGGAAGGCAGCCATGTAGTCCATACTTCCCAGCACCTGAAAGGCTGAGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR GCA 90 bp GCTTACAAGACGCAGCCTGCCAGCAGGGAAACAGGACAGAGCCTACATAGGCAACTCCACACTGAGGTTTaGTCCTGGGACCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: AYKTQPASRETGQSLHRQLHTEV*SWDLSL
Trigger: GAGGGAGAGGTCCCAGGAGCAAACCTCAGTGTGGAG...TTGCCTATGTAGGCTCTGTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp TGGTTGGTTACAAAGAGGCTTACAAGACGCAGCCTGCCAGCAGGGAAACAGGACAGAGAGCTTGCAGGCTaGATGAGGGGCCTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: WLVTKRLTRRSLPAGKQDRELAG*MRGLGR
Trigger: CCTTCCCAGGCCCCTCATCCAGCCTGCAAGCTCTCT...GTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTAAGCCTCTTTGTAACCAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR TCA 90 bp TCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCTCTAACGTTCATATGGCCTCCTaGGCACTGGCTGGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SVAQAGLKCTLWHKLASNVHMAS*ALAGSL
Trigger: GAGGGAGCCAGCCAGTGCTCAGGAGGCCATATGAAC...GTTAGAGGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp TCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCTCTAACCGAAGCCGCAGAAGCTaGGACAGGACATGGACGGTG +
Preference number: 4 (lower is better)
Translates to: SVAQAGLKCTLWHKLASNRSRRS*DRTWTV
Trigger: CACCGTCCATGTCCTGTCCCAGCTTCTGCGGCTTCG...GTTAGAGGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp TCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCTCTAACGGGACCCCGGCCTACTaGAAACACCATCATCTTCGC +
Preference number: 4 (lower is better)
Translates to: SVAQAGLKCTLWHKLASNGTPAY*KHHHLR
Trigger: GCGAAGATGATGGTGTTTCCAGTAGGCCGGGGTCCC...GTTAGAGGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp TCTCATTCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCCTCCTGAGCACTGGCTaGCTCCCTCAGGAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: SHSVAQAGLKCTLWHKLALLSTG*LPQEFP
Trigger: AGGAAACTCCTGAGGGAGCCAGCCAGTGCTCAGGAG...GGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGAATGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp TACAAGACGCAGCCTGCCAGCAGGGAAACAGGACAGAGCCTACATAGGCAAGGTCAGGATCCCTCCTTGTaGCTTCTGACTTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: YKTQPASRETGQSLHRQGQDPSL*LLTFPP
Trigger: TGGAGGGAAAGTCAGAAGCCACAAGGAGGGATCCTG...ACCTTGCCTATGTAGGCTCTGTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp TCTCATTCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCCACCGGGCCTGGGCTTaGAGCTTACACACAGCAATG +
Preference number: 4 (lower is better)
Translates to: SHSVAQAGLKCTLWHKLAHRAWA*SLHTAM
Trigger: CATTGCTGTGTGTAAGCTCCAAGCCCAGGCCCGGTG...GGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGAATGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp CCCCACTCAGCCTTTCAGGTGCTGGGAAGTATGGACTACATGGCTGCCTTCCAGCCAGTGGAATCCAGCTaGTCTTTTGTTCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: PHSAFQVLGSMDYMAAFQPVESS*SFVLLS
Trigger: GCTGAGGAGAACAAAAGACCAGCTGGATTCCACTGG...CTGGAAGGCAGCCATGTAGTCCATACTTCCCAGCACCTGAAAGGCTGAGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp GACTCGAGATCCTCTTGCCTTTGCCTACAAAGTGCCAGCATTCTAAGCATGTGTGCCGCAGGGCAGCCCTaGGACACACTGGATCCAAAC +
Preference number: 4 (lower is better)
Translates to: DSRSSCLCLQSASILSMCAAGQP*DTLDPN
Trigger: GTTTGGATCCAGTGTGTCCCAGGGCTGCCCTGCGGC...ACACATGCTTAGAATGCTGGCACTTTGTAGGCAAAGGCAAGAGGATCTCGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR TCA 90 bp TCTCATTCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCTCGACTCTCACTCTCTaGCATGTGAGGACCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SHSVAQAGLKCTLWHKLASTLTL*HVRTLG
Trigger: CCCAAGGGTCCTCACATGTCAGAGAGTGAGAGTCGA...GGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGAATGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR GCA 90 bp GGAAGTATGGACTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGACCTCTGGGTGACCTGTaGACTAGGGGCCTCCCCGTT +
Preference number: 4 (lower is better)
Translates to: GSMDYMAAFQSTLWFVLRPLGDL*TRGLPV
Trigger: AACGGGGAGGCCCCTAGTGCACAGGTCACCCAGAGG...TCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAGTCCATACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR GCA 90 bp TGGTTGGTTACAAAGAGGCTTACAAGACGCAGCCTGCCAGCAGGGAAACAGGACGGGACCTCTCCCTCTTaGTTCGTTGTAGGAATCTCC +
Preference number: 4 (lower is better)
Translates to: WLVTKRLTRRSLPAGKQDGTSPS*FVVGIS
Trigger: GGAGATTCCTACAACGAAGCAAGAGGGAGAGGTCCC...GTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTAAGCCTCTTTGTAACCAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR GCA 90 bp TACAAGACGCAGCCTGCCAGCAGGGAAACAGGACAGAGCCTACATAGGCAAGGTCTACTACCTGCAGCATaGTGGTCCACTGAGAGACAA +
Preference number: 4 (lower is better)
Translates to: YKTQPASRETGQSLHRQGLLPAA*WSTERQ
Trigger: TTGTCTCTCAGTGGACCAGCATGCTGCAGGTAGTAG...ACCTTGCCTATGTAGGCTCTGTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp TCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCTCTAACTTCTCTCAGAGTCTCTaGCTTGTTCGGGACCCCTCG +
Preference number: 4 (lower is better)
Translates to: SVAQAGLKCTLWHKLASNFSQSL*LVRDPS
Trigger: CGAGGGGTCCCGAACAAGCCAGAGACTCTGAGAGAA...GTTAGAGGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp GCTTACAAGACGCAGCCTGCCAGCAGGGAAACAGGACAGAGCCTACATAGGCAACAGAGGAGTCATTCTTaGAAAGCCACGTCACAGGCT +
Preference number: 4 (lower is better)
Translates to: AYKTQPASRETGQSLHRQQRSHS*KATSQA
Trigger: AGCCTGTGACGTGGCTTTCCAAGAATGACTCCTCTG...TTGCCTATGTAGGCTCTGTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp GTTCTTCCAGACTCAGCTTCCAGGCCATCCAACGCCAAAGCTTCACTGGTTTTAAGCTGGGACAGGACATaGACGGTGCTGGGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: VLPDSASRPSNAKASLVLSWDRT*TVLGLW
Trigger: CCAAAGACCCAGCACCGTCCATGTCCTGTCCCAGCT...TAAAACCAGTGAAGCTTTGGCGTTGGATGGCCTGGAAGCTGAGTCTGGAAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR TCA 90 bp GACTCGAGATCCTCTTGCCTTTGCCTACAAAGTGCCAGCATTCTAAGCATGTGTGGGAGAGTGAAGCTGTaGCTCAGATGGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: DSRSSCLCLQSASILSMCGRVKL*LRWLLR
Trigger: CCTCAGCAGCCATCTGAGTCACAGCTTCACTCTCCC...ACACATGCTTAGAATGCTGGCACTTTGTAGGCAAAGGCAAGAGGATCTCGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR TCA 90 bp GTTCTTCCAGACTCAGCTTCCAGGCCATCCAACGCCAAAGCTTCACTGGTTTTACCCTTGGGTATTCCTTaGAGCACCTCTCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: VLPDSASRPSNAKASLVLPLGIP*STSPWP
Trigger: AGGCCATGGAGAGGTGCTTCAAGGAATACCCAAGGG...TAAAACCAGTGAAGCTTTGGCGTTGGATGGCCTGGAAGCTGAGTCTGGAAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR TCA 90 bp TCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCTCTAACCAGCAGCAGCTTTGGTaGTGTTGCTCTGCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: SVAQAGLKCTLWHKLASNQQQLW*CCSALV
Trigger: AACCAGAGCAGAGCAACATCACCAAAGCTGCTGCTG...GTTAGAGGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR TCA 90 bp TGGTTGGTTACAAAGAGGCTTACAAGACGCAGCCTGCCAGCAGGGAAACAGGACGGCTCTTCCAAAGACTaGACTCATCAAATGGGGAGC +
Preference number: 4 (lower is better)
Translates to: WLVTKRLTRRSLPAGKQDGSSKD*THQMGS
Trigger: GCTCCCCATTTGATGAGTTCAGTCTTTGGAAGAGCC...GTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTAAGCCTCTTTGTAACCAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp GTTCTTCCAGACTCAGCTTCCAGGCCATCCAACGCCAAAGCTTCACTGGTTTTAGGTTTCTCGGCTGGCTaGGAGAGTGAAGCTGTGACT +
Preference number: 4 (lower is better)
Translates to: VLPDSASRPSNAKASLVLGFSAG*ESEAVT
Trigger: AGTCACAGCTTCACTCTCCCAGCCAGCCGAGAAACC...TAAAACCAGTGAAGCTTTGGCGTTGGATGGCCTGGAAGCTGAGTCTGGAAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp TGGTTGGTTACAAAGAGGCTTACAAGACGCAGCCTGCCAGCAGGGAAACAGGACCTCCATGGCCTTGCTTaGAAGCCATTCCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: WLVTKRLTRRSLPAGKQDLHGLA*KPFLQL
Trigger: AAGCTGAAGGAATGGCTTCCAAGCAAGGCCATGGAG...GTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTAAGCCTCTTTGTAACCAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp ACAAGCCTCACTTCGAGTAGGATGAAATCTAAGACTCCAGGATCATGGAAAGAGCGCTGTCCTCACTGCTaGAGGTGGCATGGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: TSLTSSRMKSKTPGSWKERCPHC*RWHGGP
Trigger: TGGCCCACCATGCCACCTCCAGCAGTGAGGACAGCG...CTCTTTCCATGATCCTGGAGTCTTAGATTTCATCCTACTCGAAGTGAGGCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp TCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCTCTAACTTATCAGGGAGAGCCTaGATGTTCACTGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SVAQAGLKCTLWHKLASNLSGRA*MFTAAR
Trigger: CCTGGCTGCAGTGAACATCCAGGCTCTCCCTGATAA...GTTAGAGGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp AATGTACTCTGTGGCATAAACTGGCCTCTAACTCACAATCCCCACTCAGCCTTTTGGCCTCCTGAGCACTaGCTGGCTCCCTCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: NVLCGINWPLTHNPHSAFWPPEH*LAPSGV
Trigger: AACTCCTGAGGGAGCCAGCCAGTGCTCAGGAGGCCA...AAAGGCTGAGTGGGGATTGTGAGTTAGAGGCCAGTTTATGCCACAGAGTACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp GCTTACAAGACGCAGCCTGCCAGCAGGGAAACAGGACAGAGCCTACATAGGCAAACAATGACACTCTTTTaGGACCCTGGGCCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: AYKTQPASRETGQSLHRQTMTLF*DPGPFW
Trigger: CCAAAAAGGCCCAGGGTCCCAAAAGAGTGTCATTGT...TTGCCTATGTAGGCTCTGTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR TCA 90 bp GTTCTTCCAGACTCAGCTTCCAGGCCATCCAACGCCAAAGCTTCACTGGTTTTAGACTCAGATGGCTGCTaGGGCTTACTGGTTACAGAG +
Preference number: 4 (lower is better)
Translates to: VLPDSASRPSNAKASLVLDSDGC*GLLVTE
Trigger: CTCTGTAACCAGTAAGCCTCAGCAGCCATCTGAGTC...TAAAACCAGTGAAGCTTTGGCGTTGGATGGCCTGGAAGCTGAGTCTGGAAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR TCA 90 bp GTTCTTCCAGACTCAGCTTCCAGGCCATCCAACGCCAAAGCTTCACTGGTTTTACTCTGGTCAGAATGCTaGAGGCTCCCCTTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: VLPDSASRPSNAKASLVLLWSEC*RLPFFC
Trigger: ACAGAAGAAGGGGAGCCTTCAGCATTCTGACCAGAG...TAAAACCAGTGAAGCTTTGGCGTTGGATGGCCTGGAAGCTGAGTCTGGAAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR GCA 90 bp TCTCATTCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCTGGGTCTTCTGCTACTaGTGTTTCACCCGGACAAGA +
Preference number: 4 (lower is better)
Translates to: SHSVAQAGLKCTLWHKLAWVFCY*CFTRTR
Trigger: TCTTGTCCGGGTGAAACAGCAGTAGCAGAAGACCCA...GGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGAATGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR GCA 90 bp TCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCTCTAACCTGGGAGTGGTTAAATaGCTCCACCAGGTCCATTCT +
Preference number: 4 (lower is better)
Translates to: SVAQAGLKCTLWHKLASNLGVVK*LHQVHS
Trigger: AGAATGGACCTGGTGGAGGCATTTAACCACTCCCAG...GTTAGAGGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp CTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGAAAGAGTCTACATGGGGAGGTACCAAGTaGAGAGGGGCAGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LHGCLPEHFVVCFEKESTWGGTK*RGAAAA
Trigger: AGCTGCTGCTGCCCCTCTCCACTTGGTACCTCCCCA...TGTAGACTCTTTCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp TGGTTGGTTACAAAGAGGCTTACAAGACGCAGCCTGCCAGCAGGGAAACAGGACGCTTACACACAGCAATaGATGTCTGTACTCGAGGGT +
Preference number: 4 (lower is better)
Translates to: WLVTKRLTRRSLPAGKQDAYTQQ*MSVLEG
Trigger: ACCCTCGAGTACAGACATCCATTGCTGTGTGTAAGC...GTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTAAGCCTCTTTGTAACCAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp TTGTGGTTTGTTTTGAGAAAGAGTCTACAACAGGCCAAAGTGGACCTCTCCATCAGATGGCAGCAGCACTaGCGAAGCCGCAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: LWFVLRKSLQQAKVDLSIRWQQH*RSRRSW
Trigger: CCAGCTTCTGCGGCTTCGCCAGTGCTGCTGCCATCT...GATGGAGAGGTCCACTTTGGCCTGTTGTAGACTCTTTCTCAAAACAAACCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp TGGTTGGTTACAAAGAGGCTTACAAGACGCAGCCTGCCAGCAGGGAAACAGGACATCCGGTCACAAGCTTaGTCTTCAAGTGAGGGATTC +
Preference number: 4 (lower is better)
Translates to: WLVTKRLTRRSLPAGKQDIRSQA*SSSEGF
Trigger: GAATCCCTCACTTGAAGACCAAGCTTGTGACCGGAT...GTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTAAGCCTCTTTGTAACCAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR GCA 90 bp GGAAGTATGGACTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGAGCAAAGCTCAGGTGCTaGTGGTGCTTCAGGAACAGG +
Preference number: 4 (lower is better)
Translates to: GSMDYMAAFQSTLWFVLRAKLRC*WCFRNR
Trigger: CCTGTTCCTGAAGCACCAGCAGCACCTGAGCTTTGC...TCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAGTCCATACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp GACTCGAGATCCTCTTGCCTTTGCCTACAAAGTGCCAGCATTCTAAGCATGTGTGTTAAGCACCCTAAATaGGTTTCTCGGCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: DSRSSCLCLQSASILSMCVKHPK*VSRLAG
Trigger: CCCAGCCAGCCGAGAAACCCATTTAGGGTGCTTAAC...ACACATGCTTAGAATGCTGGCACTTTGTAGGCAAAGGCAAGAGGATCTCGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp ACAAGCCTCACTTCGAGTAGGATGAAATCTAAGACTCCAGGATCATGGAAAGAGCGAGTCAAAGAGAAGTaGGGACCCCGGCCTACTGGA +
Preference number: 4 (lower is better)
Translates to: TSLTSSRMKSKTPGSWKERVKEK*GPRPTG
Trigger: TCCAGTAGGCCGGGGTCCCCACTTCTCTTTGACTCG...CTCTTTCCATGATCCTGGAGTCTTAGATTTCATCCTACTCGAAGTGAGGCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp CATGCCAGGCTTAATTCTGAAATAACCAATGGGTTTCTATGGCCCACATTACACACAGCCCACCGGGCCTaGGCTTGGAGCTTACACACA +
Preference number: 4 (lower is better)
Translates to: HARLNSEITNGFLWPTLHTAHRA*AWSLHT
Trigger: TGTGTGTAAGCTCCAAGCCCAGGCCCGGTGGGCTGT...GTGTAATGTGGGCCATAGAAACCCATTGGTTATTTCAGAATTAAGCCTGGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR TCA 90 bp CATGCCAGGCTTAATTCTGAAATAACCAATGGGTTTCTATGGCCCACATTACACTGCCACCAGGTCAGATaGGGGGTCCTTCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: HARLNSEITNGFLWPTLHCHQVR*GVLLHP
Trigger: AGGATGGAGAAGGACCCCTCATCTGACCTGGTGGCA...GTGTAATGTGGGCCATAGAAACCCATTGGTTATTTCAGAATTAAGCCTGGCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR TCA 90 bp TCTCATTCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCGGTAGAGATAGATTCTaGGTCTGTTGCTGGTTACAC +
Preference number: 4 (lower is better)
Translates to: SHSVAQAGLKCTLWHKLAGRDRF*VCCWLH
Trigger: GTGTAACCAGCAACAGACTCAGAATCTATCTCTACC...GGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGAATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR TCA 90 bp GACTCGAGATCCTCTTGCCTTTGCCTACAAAGTGCCAGCATTCTAAGCATGTGTGAGCTTCATCCAAAATaGTCCGAGCCCAGACTACCT +
Preference number: 4 (lower is better)
Translates to: DSRSSCLCLQSASILSMCELHPK*SEPRLP
Trigger: AGGTAGTCTGGGCTCGGATCATTTTGGATGAAGCTC...ACACATGCTTAGAATGCTGGCACTTTGTAGGCAAAGGCAAGAGGATCTCGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp ACAAGCCTCACTTCGAGTAGGATGAAATCTAAGACTCCAGGATCATGGAAAGAGGTTAGGTTTGCACGCTaGGCTGCTGGGTCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: TSLTSSRMKSKTPGSWKEVRFAR*AAGSEE
Trigger: TTCCTCTGACCCAGCAGCCCAGCGTGCAAACCTAAC...CTCTTTCCATGATCCTGGAGTCTTAGATTTCATCCTACTCGAAGTGAGGCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp TCTCATTCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCAGCCACTCTACTGAATaGATTATCAGGGCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SHSVAQAGLKCTLWHKLASHSTE*IIRASS
Trigger: GGAAGAAGCCCTGATAATCCATTCAGTAGAGTGGCT...GGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGAATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp AATGTACTCTGTGGCATAAACTGGCCTCTAACTCACAATCCCCACTCAGCCTTTCAGAGCCATCGATGGTaGCGTAAGTCAGTCGGTTCT +
Preference number: 4 (lower is better)
Translates to: NVLCGINWPLTHNPHSAFQSHRW*RKSVGS
Trigger: AGAACCGACTGACTTACGCCACCATCGATGGCTCTG...AAAGGCTGAGTGGGGATTGTGAGTTAGAGGCCAGTTTATGCCACAGAGTACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
3UTR CAA 72 bp ACCCAGGCTAACCTTAGACTCGAGATCCTCTTGCCTTaGCCTACAAAGTGCCAGCATTCTAAGCATGTGTCA +
Preference number: 4 (lower is better)
Translates to: TQANLRLEILLP*PTKCQHSKHVS
Trigger: TGACACATGCTTAGAATGCTGGCACTTTGTAGGCAAAGGCAAGAGGATCTCGAGTCTAAGGTTAGCCTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR TCA 90 bp CTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGAAAGAGTCTACATTCTCTGTTTGGGGTTaGCAGAGCCATCGATGGTGG +
Preference number: 4 (lower is better)
Translates to: LHGCLPEHFVVCFEKESTFSVWG*QSHRWW
Trigger: CCACCATCGATGGCTCTGTCAACCCCAAACAGAGAA...TGTAGACTCTTTCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR GCA 90 bp AATGTACTCTGTGGCATAAACTGGCCTCTAACTCACAATCCCCACTCAGCCTTTCCTCTTTCTGGACCTTaGTTTCTGGGTTCTGACCAG +
Preference number: 4 (lower is better)
Translates to: NVLCGINWPLTHNPHSAFPLSGP*FLGSDQ
Trigger: CTGGTCAGAACCCAGAAAGCAAGGTCCAGAAAGAGG...AAAGGCTGAGTGGGGATTGTGAGTTAGAGGCCAGTTTATGCCACAGAGTACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR GCA 90 bp ACAAGCCTCACTTCGAGTAGGATGAAATCTAAGACTCCAGGATCATGGAAAGAGAATGCCTGCTTCTGGTaGAGTAGCAAGGGGACCTTC +
Preference number: 4 (lower is better)
Translates to: TSLTSSRMKSKTPGSWKENACFW*SSKGTF
Trigger: GAAGGTCCCCTTGCTACTGCACCAGAAGCAGGCATT...CTCTTTCCATGATCCTGGAGTCTTAGATTTCATCCTACTCGAAGTGAGGCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR GCA 90 bp CTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGAAAGAGTCTACAGATCGCCTCCAGTTCTaGCAGCAGAGAAGACACCTT +
Preference number: 4 (lower is better)
Translates to: LHGCLPEHFVVCFEKESTDRLQF*QQRRHL
Trigger: AAGGTGTCTTCTCTGCTGGCAGAACTGGAGGCGATC...TGTAGACTCTTTCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp GGAAGTATGGACTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGACTGACCAGGAACACTTaGCACCAAAAGCTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: GSMDYMAAFQSTLWFVLRLTRNT*HQKLGF
Trigger: GAAACCCAGCTTTTGGTGCCAAGTGTTCCTGGTCAG...TCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAGTCCATACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp AATGTACTCTGTGGCATAAACTGGCCTCTAACTCACAATCCCCACTCAGCCTTTACGTGTCCCTCTTTCTaGACCTTGCTTTCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: NVLCGINWPLTHNPHSAFTCPSF*TLLSGF
Trigger: GAACCCAGAAAGCAAGGTCCAGAAAGAGGGACACGT...AAAGGCTGAGTGGGGATTGTGAGTTAGAGGCCAGTTTATGCCACAGAGTACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp CTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGAAAGAGTCTACAGATGTTGCTCTGCTCTaGTTCCTGAGCGCTGCACTT +
Preference number: 4 (lower is better)
Translates to: LHGCLPEHFVVCFEKESTDVALL*FLSAAL
Trigger: AAGTGCAGCGCTCAGGAACCAGAGCAGAGCAACATC...TGTAGACTCTTTCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp CTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGAAAGAGTCTACAGGGCTTCTTCCATGGTaGCTGCCTCTACCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LHGCLPEHFVVCFEKESTGLLPW*LPLPSC
Trigger: ACAAGAAGGTAGAGGCAGCCACCATGGAAGAAGCCC...TGTAGACTCTTTCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp TTGTGGTTTGTTTTGAGAAAGAGTCTACAACAGGCCAAAGTGGACCTCTCCATCTCAGGGCTTCTTCCATaGTGGCTGCCTCTACCTTCT +
Preference number: 4 (lower is better)
Translates to: LWFVLRKSLQQAKVDLSISGLLP*WLPLPS
Trigger: AGAAGGTAGAGGCAGCCACCATGGAAGAAGCCCTGA...GATGGAGAGGTCCACTTTGGCCTGTTGTAGACTCTTTCTCAAAACAAACCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR GCA 90 bp AATGTACTCTGTGGCATAAACTGGCCTCTAACTCACAATCCCCACTCAGCCTTTTTCTTCCATGGTGGCTaGCTCTACCTTCTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: NVLCGINWPLTHNPHSAFFFHGG*LYLLVS
Trigger: AGAGACAAGAAGGTAGAGGCAGCCACCATGGAAGAA...AAAGGCTGAGTGGGGATTGTGAGTTAGAGGCCAGTTTATGCCACAGAGTACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp CTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGAAAGAGTCTACACTGGACCTTGCTTTCTaGGTTCTGACCAGGAACACT +
Preference number: 4 (lower is better)
Translates to: LHGCLPEHFVVCFEKESTLDLAF*VLTRNT
Trigger: AGTGTTCCTGGTCAGAACCCAGAAAGCAAGGTCCAG...TGTAGACTCTTTCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp GATGTTGATATATCCCTAAATGAAACCATGATGCACAGGCTAAATGAGAGATGCTGCACGCTGGGCTGCTaGGTCAGAGGAATCTCCCTT +
Preference number: 4 (lower is better)
Translates to: DVDISLNETMMHRLNERCCTLGC*VRGISL
Trigger: AAGGGAGATTCCTCTGACCCAGCAGCCCAGCGTGCA...GCATCTCTCATTTAGCCTGTGCATCATGGTTTCATTTAGGGATATATCAACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp GTTCTTCCAGACTCAGCTTCCAGGCCATCCAACGCCAAAGCTTCACTGGTTTTAACTGAACTCATCAAATaGGGAGCAACGGAGAAACTT +
Preference number: 4 (lower is better)
Translates to: VLPDSASRPSNAKASLVLTELIK*GATEKL
Trigger: AAGTTTCTCCGTTGCTCCCCATTTGATGAGTTCAGT...TAAAACCAGTGAAGCTTTGGCGTTGGATGGCCTGGAAGCTGAGTCTGGAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
3UTR CAA 72 bp GGAAGTATGGACTACATGGCTGCCTTCCAGAGCACTTaGTGGTTTGTTTTGAGAAAGAGTCTACAACAGGCC +
Preference number: 4 (lower is better)
Translates to: GSMDYMAAFQST*WFVLRKSLQQA
Trigger: GGCCTGTTGTAGACTCTTTCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAGTCCATACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR TCA 90 bp GATGTTGATATATCCCTAAATGAAACCATGATGCACAGGCTAAATGAGAGATGCCGAGCCCAGACTACCTaGAGCAAAGGTGCTGAGGTA +
Preference number: 4 (lower is better)
Translates to: DVDISLNETMMHRLNERCRAQTT*SKGAEV
Trigger: TACCTCAGCACCTTTGCTTCAGGTAGTCTGGGCTCG...GCATCTCTCATTTAGCCTGTGCATCATGGTTTCATTTAGGGATATATCAACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR GCA 90 bp CATGCCAGGCTTAATTCTGAAATAACCAATGGGTTTCTATGGCCCACATTACACACCTCTCCATGGCCTTaGTTGGAAGCCATTCCTTCA +
Preference number: 4 (lower is better)
Translates to: HARLNSEITNGFLWPTLHTSPWP*LEAIPS
Trigger: TGAAGGAATGGCTTCCAAGCAAGGCCATGGAGAGGT...GTGTAATGTGGGCCATAGAAACCCATTGGTTATTTCAGAATTAAGCCTGGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR GCA 90 bp GGAAGTATGGACTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGAGGCTCTTGGTTAAAATaGTTAACCGTTCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GSMDYMAAFQSTLWFVLRGSWLK*LTVPLL
Trigger: AAGGAGGGGAACGGTTAAGCATTTTAACCAAGAGCC...TCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAGTCCATACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR TCA 90 bp GGAAGTATGGACTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGATTTGGGCTGGAACTTTaGTTTCTCTTGTTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: GSMDYMAAFQSTLWFVLRFGLEL*FLLFFP
Trigger: AGGGAAGAACAAGAGAAATCAAAGTTCCAGCCCAAA...TCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAGTCCATACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR TCA 90 bp AATGTACTCTGTGGCATAAACTGGCCTCTAACTCACAATCCCCACTCAGCCTTTTCTTCTTGGTTAGGATaGGTGCAATCATTGTCAGAG +
Preference number: 4 (lower is better)
Translates to: NVLCGINWPLTHNPHSAFSSWLG*VQSLSE
Trigger: CTCTGACAATGATTGCACTCATCCTAACCAAGAAGA...AAAGGCTGAGTGGGGATTGTGAGTTAGAGGCCAGTTTATGCCACAGAGTACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR TCA 90 bp GATGTTGATATATCCCTAAATGAAACCATGATGCACAGGCTAAATGAGAGATGCACAAGGTCAGAGCACTaGGCTGTTCTTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: DVDISLNETMMHRLNERCTRSEH*AVLPGT
Trigger: TGTCCCTGGAAGAACAGCTCAGTGCTCTGACCTTGT...GCATCTCTCATTTAGCCTGTGCATCATGGTTTCATTTAGGGATATATCAACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR GCA 90 bp CTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGAAAGAGTCTACATCCAAAGCCTGGATTTaGTTAAGCAACTTCTCACCC +
Preference number: 4 (lower is better)
Translates to: LHGCLPEHFVVCFEKESTSKAWI*LSNFSP
Trigger: GGGTGAGAAGTTGCTTAAGCAAATCCAGGCTTTGGA...TGTAGACTCTTTCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR GCA 90 bp GATGTTGATATATCCCTAAATGAAACCATGATGCACAGGCTAAATGAGAGATGCCGGTTCTTCTTGAGGTaGAGTGCTACTACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: DVDISLNETMMHRLNERCRFFLR*SATTCS
Trigger: GCTGCAGGTAGTAGCACTGCACCTCAAGAAGAACCG...GCATCTCTCATTTAGCCTGTGCATCATGGTTTCATTTAGGGATATATCAACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp AAGGCGTTTATTAAGACCATACCAATGATAACACAATGTGGTACAATGGCAGAAGCTAATGCCTGCTTCTaGTGCAGTAGCAAGGGGACC +
Preference number: 4 (lower is better)
Translates to: KAFIKTIPMITQCGTMAEANACF*CSSKGT
Trigger: GGTCCCCTTGCTACTGCACCAGAAGCAGGCATTAGC...TTCTGCCATTGTACCACATTGTGTTATCATTGGTATGGTCTTAATAAACGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp GATGTTGATATATCCCTAAATGAAACCATGATGCACAGGCTAAATGAGAGATGCGTGCCGACTCCGGTTTaGCCCATGGTAGAGATAGAT +
Preference number: 4 (lower is better)
Translates to: DVDISLNETMMHRLNERCVPTPV*PMVEID
Trigger: ATCTATCTCTACCATGGGCCAAACCGGAGTCGGCAC...GCATCTCTCATTTAGCCTGTGCATCATGGTTTCATTTAGGGATATATCAACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp GATGTTGATATATCCCTAAATGAAACCATGATGCACAGGCTAAATGAGAGATGCTTTAACCGGTGCAGCTaGCATCTACGTGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: DVDISLNETMMHRLNERCFNRCS*HLRAGS
Trigger: ACTGCCTGCACGTAGATGCCAGCTGCACCGGTTAAA...GCATCTCTCATTTAGCCTGTGCATCATGGTTTCATTTAGGGATATATCAACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR TCA 90 bp AAGGCGTTTATTAAGACCATACCAATGATAACACAATGTGGTACAATGGCAGAAGCTCCCCTTCTTCTGTaGGTCCACAGTCGAGTCAAA +
Preference number: 4 (lower is better)
Translates to: KAFIKTIPMITQCGTMAEAPLLL*VHSRVK
Trigger: TTTGACTCGACTGTGGACTCACAGAAGAAGGGGAGC...TTCTGCCATTGTACCACATTGTGTTATCATTGGTATGGTCTTAATAAACGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp AAGGCGTTTATTAAGACCATACCAATGATAACACAATGTGGTACAATGGCAGAAACTGAGGTTTGCTCCTaGGACCTCTCCCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: KAFIKTIPMITQCGTMAETEVCS*DLSLLL
Trigger: AAGCAAGAGGGAGAGGTCCCAGGAGCAAACCTCAGT...TTCTGCCATTGTACCACATTGTGTTATCATTGGTATGGTCTTAATAAACGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR TCA 90 bp CTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGAAAGAGTCTACATCATGCAATAAACAGTaGGAAACAGGAATATCGGTG +
Preference number: 4 (lower is better)
Translates to: LHGCLPEHFVVCFEKESTSCNKQ*ETGISV
Trigger: CACCGATATTCCTGTTTCTCACTGTTTATTGCATGA...TGTAGACTCTTTCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR TCA 90 bp AAGGCGTTTATTAAGACCATACCAATGATAACACAATGTGGTACAATGGCAGAAAGCATGCTGGTCCACTaGGAGACAATGACACTCTTT +
Preference number: 4 (lower is better)
Translates to: KAFIKTIPMITQCGTMAESMLVH*ETMTLF
Trigger: AAAGAGTGTCATTGTCTCTCAGTGGACCAGCATGCT...TTCTGCCATTGTACCACATTGTGTTATCATTGGTATGGTCTTAATAAACGCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp AAGGCGTTTATTAAGACCATACCAATGATAACACAATGTGGTACAATGGCAGAACCAGAGGTTTACCAGTaGAATCCAGCTGGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: KAFIKTIPMITQCGTMAEPEVYQ*NPAGLL
Trigger: CAAAAGACCAGCTGGATTCCACTGGTAAACCTCTGG...TTCTGCCATTGTACCACATTGTGTTATCATTGGTATGGTCTTAATAAACGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR TCA 90 bp GATGTTGATATATCCCTAAATGAAACCATGATGCACAGGCTAAATGAGAGATGCTCCTTGCTTTTCTGCTaGTTCTTCTTGGTTAGGATG +
Preference number: 4 (lower is better)
Translates to: DVDISLNETMMHRLNERCSLLFC*FFLVRM
Trigger: CATCCTAACCAAGAAGAATCAGCAGAAAAGCAAGGA...GCATCTCTCATTTAGCCTGTGCATCATGGTTTCATTTAGGGATATATCAACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR TCA 90 bp GATGTTGATATATCCCTAAATGAAACCATGATGCACAGGCTAAATGAGAGATGCAGACAAACCTGTGTATaGCAACATCCTTCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: DVDISLNETMMHRLNERCRQTCV*QHPSSV
Trigger: GACAGAAGAAGGATGTTGTCATACACAGGTTTGTCT...GCATCTCTCATTTAGCCTGTGCATCATGGTTTCATTTAGGGATATATCAACATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CCA 90 bp AAGGCGTTTATTAAGACCATACCAATGATAACACAATGTGGTACAATGGCAGAAGAACCATTGTCAACCTaGCTCTTCCAAAGACTGAAC +
Preference number: 4 (lower is better)
Translates to: KAFIKTIPMITQCGTMAEEPLST*LFQRLN
Trigger: GTTCAGTCTTTGGAAGAGCCAGGTTGACAATGGTTC...TTCTGCCATTGTACCACATTGTGTTATCATTGGTATGGTCTTAATAAACGCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS GCA 90 bp AGCAGCACTGGCGAAGCCGCAGAAGCTGGGACAGGACATGGACGGTaGTGGGTCTTTGGGAGTCTGCCGCAGGGCAGCCCTGGGACACAC +
Preference number: 5 (lower is better)
Translates to: SSTGEAAEAGTGHGR*WVFGSLPQGSPGTH
Trigger: GTGTGTCCCAGGGCTGCCCTGCGGCAGACTCCCAAAGACCCAGCACCGTCCATGTCCTGTCCCAGCTTCTGCGGCTTCGCCAGTGCTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076941.12
ENSMUST00000151697.2
CDS CCA 90 bp AGCACTGGCGAAGCCGCAGAAGCTGGGACAGGACATGGACGGTGCTaGGTCTTTGGGAGTCTGCCGCAGGGCAGCCCTGGGACACACTGG +
Preference number: 5 (lower is better)
Translates to: STGEAAEAGTGHGRC*VFGSLPQGSPGTHW
Trigger: CCAGTGTGTCCCAGGGCTGCCCTGCGGCAGACTCCCAAAGACCCAGCACCGTCCATGTCCTGTCCCAGCTTCTGCGGCTTCGCCAGTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076941.12
ENSMUST00000151697.2
CDS CCA 90 bp GTGGGGTCCAGAGCCGACTTCAGCAGAGAAAGATGGCAGCAGCACTaGCGAAGCCGCAGAAGCTGGGACAGGACATGGACGGTGCTGGGT +
Preference number: 5 (lower is better)
Translates to: VGSRADFSRERWQQH*RSRRSWDRTWTVLG
Trigger: ACCCAGCACCGTCCATGTCCTGTCCCAGCTTCTGCGGCTTCGCCAGTGCTGCTGCCATCTTTCTCTGCTGAAGTCGGCTCTGGACCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CCA 90 bp GGGGCGTCTCTCACCGACTTCAGCAGAGAAAGATGGCAGCAGCACTaGCGAAGCCGCAGAAGCTGGGACAGGACATGGACGGTGCTGGGT +
Preference number: 5 (lower is better)
Translates to: GASLTDFSRERWQQH*RSRRSWDRTWTVLG
Trigger: ACCCAGCACCGTCCATGTCCTGTCCCAGCTTCTGCGGCTTCGCCAGTGCTGCTGCCATCTTTCTCTGCTGAAGTCGGTGAGAGACGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151697.2
CDS GCA 90 bp GGTGGCATGGTGGGCCATTCCCGAGCAAAGCTCAGGTGCTGCTGGTaGTTCAGGAACAGGCCTCCAAGTCTTGGATGGTCCCTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: GGMVGHSRAKLRCCW*FRNRPPSLGWSLER
Trigger: CCTCTCCAGGGACCATCCAAGACTTGGAGGCCTGTTCCTGAAGCACCAGCAGCACCTGAGCTTTGCTCGGGAATGGCCCACCATGCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS GCA 90 bp GCTGGAGGTGGCATGGTGGGCCATTCCCGAGCAAAGCTCAGGTGCTaGTGGTGCTTCAGGAACAGGCCTCCAAGTCTTGGATGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: AGGGMVGHSRAKLRC*WCFRNRPPSLGWSL
Trigger: CAGGGACCATCCAAGACTTGGAGGCCTGTTCCTGAAGCACCAGCAGCACCTGAGCTTTGCTCGGGAATGGCCCACCATGCCACCTCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS GCA 90 bp ACTGCTGGAGGTGGCATGGTGGGCCATTCCCGAGCAAAGCTCAGGTaGTGCTGGTGCTTCAGGAACAGGCCTCCAAGTCTTGGATGGTCC +
Preference number: 5 (lower is better)
Translates to: TAGGGMVGHSRAKLR*CWCFRNRPPSLGWS
Trigger: GGACCATCCAAGACTTGGAGGCCTGTTCCTGAAGCACCAGCAGCACCTGAGCTTTGCTCGGGAATGGCCCACCATGCCACCTCCAGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CCA 90 bp ACCCCGGCCTACTGGAAACACCATCATCTTCGCTGTCCTCACTGCTaGAGGTGGCATGGTGGGCCATTCCCGAGCAAAGCTCAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: TPAYWKHHHLRCPHC*RWHGGPFPSKAQVL
Trigger: CAGCACCTGAGCTTTGCTCGGGAATGGCCCACCATGCCACCTCCAGCAGTGAGGACAGCGAAGATGATGGTGTTTCCAGTAGGCCGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CCA 90 bp TTCAGCAGAGAAAGATGGCAGCAGCACTGGCGAAGCCGCAGAAGCTaGGACAGGACATGGACGGTGCTGGGTCTTTGGGAGTCTGCCGCA +
Preference number: 5 (lower is better)
Translates to: FSRERWQQHWRSRRS*DRTWTVLGLWESAA
Trigger: TGCGGCAGACTCCCAAAGACCCAGCACCGTCCATGTCCTGTCCCAGCTTCTGCGGCTTCGCCAGTGCTGCTGCCATCTTTCTCTGCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076941.12
ENSMUST00000151697.2
CDS CCA 90 bp GCCTACTGGAAACACCATCATCTTCGCTGTCCTCACTGCTGGAGGTaGCATGGTGGGCCATTCCCGAGCAAAGCTCAGGTGCTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: AYWKHHHLRCPHCWR*HGGPFPSKAQVLLV
Trigger: CACCAGCAGCACCTGAGCTTTGCTCGGGAATGGCCCACCATGCCACCTCCAGCAGTGAGGACAGCGAAGATGATGGTGTTTCCAGTAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CCA 90 bp ATGACTACAGACGGGGCGTCTCTCACCGACTTCAGCAGAGAAAGATaGCAGCAGCACTGGCGAAGCCGCAGAAGCTGGGACAGGACATGG +
Preference number: 5 (lower is better)
Translates to: MTTDGASLTDFSRER*QQHWRSRRSWDRTW
Trigger: CCATGTCCTGTCCCAGCTTCTGCGGCTTCGCCAGTGCTGCTGCCATCTTTCTCTGCTGAAGTCGGTGAGAGACGCCCCGTCTGTAGTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151697.2
CDS CCA 90 bp GAAACACCATCATCTTCGCTGTCCTCACTGCTGGAGGTGGCATGGTaGGCCATTCCCGAGCAAAGCTCAGGTGCTGCTGGTGCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: ETPSSSLSSLLEVAW*AIPEQSSGAAGASG
Trigger: TCCTGAAGCACCAGCAGCACCTGAGCTTTGCTCGGGAATGGCCCACCATGCCACCTCCAGCAGTGAGGACAGCGAAGATGATGGTGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CCA 90 bp CTGGAAACACCATCATCTTCGCTGTCCTCACTGCTGGAGGTGGCATaGTGGGCCATTCCCGAGCAAAGCTCAGGTGCTGCTGGTGCTTCA +
Preference number: 5 (lower is better)
Translates to: LETPSSSLSSLLEVA*WAIPEQSSGAAGAS
Trigger: TGAAGCACCAGCAGCACCTGAGCTTTGCTCGGGAATGGCCCACCATGCCACCTCCAGCAGTGAGGACAGCGAAGATGATGGTGTTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS GCA 90 bp TCTTTAGGGTTAGGATCCTGCCGCCATGGGACGTTTCCACACCACTaGTTCCCCTCCGCCTTGGTTCTAGCACATCGGAAGAACAGCCTC +
Preference number: 5 (lower is better)
Translates to: SLGLGSCRHGTFPHH*FPSALVLAHRKNSL
Trigger: GAGGCTGTTCTTCCGATGTGCTAGAACCAAGGCGGAGGGGAAGCAGTGGTGTGGAAACGTCCCATGGCGGCAGGATCCTAACCCTAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CCA 90 bp GTGAGTCCACAGTCGAGTCAAAGAGAAGTGGGGACCCCGGCCTACTaGAAACACCATCATCTTCGCTGTCCTCACTGCTGGAGGTGGCAT +
Preference number: 5 (lower is better)
Translates to: VSPQSSQREVGTPAY*KHHHLRCPHCWRWH
Trigger: ATGCCACCTCCAGCAGTGAGGACAGCGAAGATGATGGTGTTTCCAGTAGGCCGGGGTCCCCACTTCTCTTTGACTCGACTGTGGACTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CAA 90 bp CCCCACTCAGCCTTTCAGGTGCTGGGAAGTATGGACTACATGGCTGCCTTCCAGTCAGCCAGTGTGAGCTaGGTGACAGGTCCTTCGGAT +
Preference number: 5 (lower is better)
Translates to: PHSAFQVLGSMDYMAAFQSASVS*VTGPSD
Trigger: ATCCGAAGGACCTGTCACCAAGCTCACACTGGCTGA...CTGGAAGGCAGCCATGTAGTCCATACTTCCCAGCACCTGAAAGGCTGAGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 90 bp ACGCTGGGCTGCTGGGTCAGAGGAATCTCCCTTCTTGGAAACACCTaGAGCAGCAGGCATCTGTCTCTGCACACTCTGGTCAGAATGCTG +
Preference number: 5 (lower is better)
Translates to: TLGCWVRGISLLGNT*SSRHLSLHTLVRML
Trigger: CAGCATTCTGACCAGAGTGTGCAGAGACAGATGCCTGCTGCTTCAGGTGTTTCCAAGAAGGGAGATTCCTCTGACCCAGCAGCCCAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 90 bp AGAGGGGCAGCAGCAGCTTTGGTGATGTTGCTCTGCTCTGGTTCCTaGGCGCTGCACTTCTCTTTAGTTCCTTGTTCTGGGGAGAGAGCC +
Preference number: 5 (lower is better)
Translates to: RGAAAALVMLLCSGS*ALHFSLVPCSGERA
Trigger: GGCTCTCTCCCCAGAACAAGGAACTAAAGAGAAGTGCAGCGCTCAGGAACCAGAGCAGAGCAACATCACCAAAGCTGCTGCTGCCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS GCA 90 bp CAGCTGGCATCTACGTGCAGGCAGTGCTACCTCCACACTGAGGTTTaGTCCTGGGACCTCTCCCTCTTGCTTCGTTGTAGGAATCTCCNN +
Preference number: 5 (lower is better)
Translates to: QLASTCRQCYLHTEV*SWDLSLLLRCRNLX
Trigger: NNGGAGATTCCTACAACGAAGCAAGAGGGAGAGGTCCCAGGAGCAAACCTCAGTGTGGAGGTAGCACTGCCTGCACGTAGATGCCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151697.2
CDS CCA 90 bp TGTTCGGGACCCCTCGACTCTCACTCTCTGACATGTGAGGACCCTTaGGTATTCCTTGAAGCACCTCTCCATGGCCTTGCTTGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: CSGPLDSHSLTCEDP*VFLEAPLHGLAWKP
Trigger: TGGCTTCCAAGCAAGGCCATGGAGAGGTGCTTCAAGGAATACCCAAGGGTCCTCACATGTCAGAGAGTGAGAGTCGAGGGGTCCCGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CCA 90 bp CTGCTCTGGTTCCTGAGCGCTGCACTTCTCTTTAGTTCCTTGTTCTaGGGAGAGAGCCAGAGCACTGAGTGCGTCCTCCAAAGCCTGGAT +
Preference number: 5 (lower is better)
Translates to: LLWFLSAALLFSSLF*GESQSTECVLQSLD
Trigger: ATCCAGGCTTTGGAGGACGCACTCAGTGCTCTGGCTCTCTCCCCAGAACAAGGAACTAAAGAGAAGTGCAGCGCTCAGGAACCAGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 90 bp TCTCAGAGTCTCTGGCTTGTTCGGGACCCCTCGACTCTCACTCTCTaGCATGTGAGGACCCTTGGGTATTCCTTGAAGCACCTCTCCATG +
Preference number: 5 (lower is better)
Translates to: SQSLWLVRDPSTLTL*HVRTLGYSLKHLSM
Trigger: CATGGAGAGGTGCTTCAAGGAATACCCAAGGGTCCTCACATGTCAGAGAGTGAGAGTCGAGGGGTCCCGAACAAGCCAGAGACTCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 90 bp GGCAGCCCTGGGACACACTGGATCCAAACTCCTGAGCCACTCTACTaGATGGATTATCAGGGCTTCTTCCATGGTGGCTGCCTCTACCTT +
Preference number: 5 (lower is better)
Translates to: GSPGTHWIQTPEPLY*MDYQGFFHGGCLYL
Trigger: AAGGTAGAGGCAGCCACCATGGAAGAAGCCCTGATAATCCATTCAGTAGAGTGGCTCAGGAGTTTGGATCCAGTGTGTCCCAGGGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076941.12
ENSMUST00000151697.2
CDS TCA 90 bp GGTGCAGTGCTACTACCTGCAGCATGCTGGTCCACTGAGAGACAATaGCACTCTTTTGGGACCCTGGGCCTTTTTGGATCGCCTCCAGTT +
Preference number: 5 (lower is better)
Translates to: GAVLLPAACWSTERQ*HSFGTLGLFGSPPV
Trigger: AACTGGAGGCGATCCAAAAAGGCCCAGGGTCCCAAAAGAGTGTCATTGTCTCTCAGTGGACCAGCATGCTGCAGGTAGTAGCACTGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS GCA 90 bp CAAGAGGGAGATCAGCATGACCTGAGGTCCCTGGGAGTGGTTAAATaGCTCCACCAGGTCCATTCTCTGTTTGGGGTTGACAGAGCCATC +
Preference number: 5 (lower is better)
Translates to: QEGDQHDLRSLGVVK*LHQVHSLFGVDRAI
Trigger: GATGGCTCTGTCAACCCCAAACAGAGAATGGACCTGGTGGAGGCATTTAACCACTCCCAGGGACCTCAGGTCATGCTGATCTCCCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CCA 90 bp CTTACTGGTTACAGAGAGTTCTTTAGGGTTAGGATCCTGCCGCCATaGGACGTTTCCACACCACTGCTTCCCCTCCGCCTTGGTTCTAGC +
Preference number: 5 (lower is better)
Translates to: LTGYREFFRVRILPP*DVSTPLLPLRLGSS
Trigger: GCTAGAACCAAGGCGGAGGGGAAGCAGTGGTGTGGAAACGTCCCATGGCGGCAGGATCCTAACCCTAAAGAACTCTCTGTAACCAGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CCA 90 bp CAAGTGGAGAGGGGCAGCAGCAGCTTTGGTGATGTTGCTCTGCTCTaGTTCCTGAGCGCTGCACTTCTCTTTAGTTCCTTGTTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: QVERGSSSFGDVALL*FLSAALLFSSLFWG
Trigger: TCCCCAGAACAAGGAACTAAAGAGAAGTGCAGCGCTCAGGAACCAGAGCAGAGCAACATCACCAAAGCTGCTGCTGCCCCTCTCCACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CAA 90 bp GCTTACAAGACGCAGCCTGCCAGCAGGGAAACAGGACAGAGCCTACATAGGCAATCTCCATGGCCTTGCTaGGAAGCCATTCCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: AYKTQPASRETGQSLHRQSPWPC*EAIPSA
Trigger: AGCTGAAGGAATGGCTTCCAAGCAAGGCCATGGAGA...TTGCCTATGTAGGCTCTGTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CAA 90 bp TGGTTGGTTACAAAGAGGCTTACAAGACGCAGCCTGCCAGCAGGGAAACAGGACCACCTCTCCATGGCCTaGCTTGGAAGCCATTCCTTC +
Preference number: 5 (lower is better)
Translates to: WLVTKRLTRRSLPAGKQDHLSMA*LGSHSF
Trigger: GAAGGAATGGCTTCCAAGCAAGGCCATGGAGAGGTG...GTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTAAGCCTCTTTGTAACCAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 90 bp CCTGAAGCAGCAGGCATCTGTCTCTGCACACTCTGGTCAGAATGCTaGAGGCTCCCCTTCTTCTGTGAGTCCACAGTCGAGTCAAAGAGA +
Preference number: 5 (lower is better)
Translates to: PEAAGICLCTLWSEC*RLPFFCESTVESKR
Trigger: TCTCTTTGACTCGACTGTGGACTCACAGAAGAAGGGGAGCCTTCAGCATTCTGACCAGAGTGTGCAGAGACAGATGCCTGCTGCTTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS GCA 90 bp GACACTCTTTTGGGACCCTGGGCCTTTTTGGATCGCCTCCAGTTCTaGCAGCAGAGAAGACACCTTGGTGCTCCTTCGTGTGTCATCAAA +
Preference number: 5 (lower is better)
Translates to: DTLLGPWAFLDRLQF*QQRRHLGAPSCVIK
Trigger: TTTGATGACACACGAAGGAGCACCAAGGTGTCTTCTCTGCTGGCAGAACTGGAGGCGATCCAAAAAGGCCCAGGGTCCCAAAAGAGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS GCA 90 bp GCCATCGATGGTGGCGTAAGTCAGTCGGTTCTTCTTGAGGTGCAGTaGTACTACCTGCAGCATGCTGGTCCACTGAGAGACAATGACACT +
Preference number: 5 (lower is better)
Translates to: AIDGGVSQSVLLEVQ*YYLQHAGPLRDNDT
Trigger: AGTGTCATTGTCTCTCAGTGGACCAGCATGCTGCAGGTAGTAGCACTGCACCTCAAGAAGAACCGACTGACTTACGCCACCATCGATGGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CCA 90 bp GCAGCTGGCATCTACGTGCAGGCAGTGCTACCAGAGGTTTACCAGTaGAATCCAGCTGGTCTTTTGTTCTCCTCAGCAAAAGGCTCTTGG +
Preference number: 5 (lower is better)
Translates to: AAGIYVQAVLPEVYQ*NPAGLLFSSAKGSW
Trigger: CCAAGAGCCTTTTGCTGAGGAGAACAAAAGACCAGCTGGATTCCACTGGTAAACCTCTGGTAGCACTGCCTGCACGTAGATGCCAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CAA 90 bp TGGTTGGTTACAAAGAGGCTTACAAGACGCAGCCTGCCAGCAGGGAAACAGGACATGCCAAAGAGGATCTaGAGGTCAGCCAGTGTGAGC +
Preference number: 5 (lower is better)
Translates to: WLVTKRLTRRSLPAGKQDMPKRI*RSASVS
Trigger: GCTCACACTGGCTGACCTCAAGATCCTCTTTGGCAT...GTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTAAGCCTCTTTGTAACCAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CAA 90 bp GACTCGAGATCCTCTTGCCTTTGCCTACAAAGTGCCAGCATTCTAAGCATGTGTGGGGCAGCAGCAGCTTaGGTGATGTTGCTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: DSRSSCLCLQSASILSMCGAAAA*VMLLCS
Trigger: AGAGCAGAGCAACATCACCAAAGCTGCTGCTGCCCC...ACACATGCTTAGAATGCTGGCACTTTGTAGGCAAAGGCAAGAGGATCTCGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CAA 90 bp TGGTTGGTTACAAAGAGGCTTACAAGACGCAGCCTGCCAGCAGGGAAACAGGACGTTCCCCTCCTTTCATaGAACCATTGTCAACCTGGC +
Preference number: 5 (lower is better)
Translates to: WLVTKRLTRRSLPAGKQDVPLLS*NHCQPG
Trigger: GCCAGGTTGACAATGGTTCAATGAAAGGAGGGGAAC...GTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTAAGCCTCTTTGTAACCAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CAA 90 bp TACAAGACGCAGCCTGCCAGCAGGGAAACAGGACAGAGCCTACATAGGCAAGGTAATCCAGCTGGTCTTTaGTTCTCCTCAGCAAAAGGC +
Preference number: 5 (lower is better)
Translates to: YKTQPASRETGQSLHRQGNPAGL*FSSAKG
Trigger: GCCTTTTGCTGAGGAGAACAAAAGACCAGCTGGATT...ACCTTGCCTATGTAGGCTCTGTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CAA 90 bp TCTCATTCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCAGGTCCATTCTCTGTTaGGGGTTGACAGAGCCATCG +
Preference number: 5 (lower is better)
Translates to: SHSVAQAGLKCTLWHKLARSILC*GLTEPS
Trigger: CGATGGCTCTGTCAACCCCAAACAGAGAATGGACCT...GGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGAATGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 90 bp AAGCACCCTAAATGGGTTTCTCGGCTGGCTGGGAGAGTGAAGCTGTaGCTCAGATGGCTGCTGAGGCTTACTGGTTACAGAGAGTTCTTT +
Preference number: 5 (lower is better)
Translates to: KHPKWVSRLAGRVKL*LRWLLRLTGYREFF
Trigger: AAAGAACTCTCTGTAACCAGTAAGCCTCAGCAGCCATCTGAGTCACAGCTTCACTCTCCCAGCCAGCCGAGAAACCCATTTAGGGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 90 bp GATTTTCCACACATTATAAAGATGATGTTGGTTCATATGGCCTCCTaGGCACTGGCTGGCTCCCTCAGGAGTTTCCTGGCGGCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: DFPHIIKMMLVHMAS*ALAGSLRSFLAACL
Trigger: AAGGCAGGCCGCCAGGAAACTCCTGAGGGAGCCAGCCAGTGCTCAGGAGGCCATATGAACCAACATCATCTTTATAATGTGTGGAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 90 bp AGCTGGGTCTTCTGCTACTGCTGTTTCACCCGGACAAGACTTCAGTaGCCGATGCAGCTCATCTATGGCTTCACTCGTGATTTTCCACAC +
Preference number: 5 (lower is better)
Translates to: SWVFCYCCFTRTRLQ*PMQLIYGFTRDFPH
Trigger: GTGTGGAAAATCACGAGTGAAGCCATAGATGAGCTGCATCGGTCACTGAAGTCTTGTCCGGGTGAAACAGCAGTAGCAGAAGACCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 90 bp CTGAGTCTGTTGCTGGTTACACGTTTCTCTACTTCGTTCTTCCAGTaGTGGATCAGGGAAGCGGGGCAGACGATCAGTGTTCCACTGGAA +
Preference number: 5 (lower is better)
Translates to: LSLLLVTRFSTSFFQ*WIREAGQTISVPLE
Trigger: TTCCAGTGGAACACTGATCGTCTGCCCCGCTTCCCTGATCCATCACTGGAAGAACGAAGTAGAGAAACGTGTAACCAGCAACAGACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 90 bp TTCTTCTTGAGGTGCAGTGCTACTACCTGCAGCATGCTGGTCCACTaGGAGACAATGACACTCTTTTGGGACCCTGGGCCTTTTTGGATC +
Preference number: 5 (lower is better)
Translates to: FFLRCSATTCSMLVH*ETMTLFWDPGPFWI
Trigger: GATCCAAAAAGGCCCAGGGTCCCAAAAGAGTGTCATTGTCTCTCAGTGGACCAGCATGCTGCAGGTAGTAGCACTGCACCTCAAGAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CAA 90 bp TCTGTAGCCCAGGCTGGCCTGAAATGTACTCTGTGGCATAAACTGGCCTCTAACCTTCTCTTTAGTTCCTaGTTCTGGGGAGAGAGCCAG +
Preference number: 5 (lower is better)
Translates to: SVAQAGLKCTLWHKLASNLLFSS*FWGESQ
Trigger: CTGGCTCTCTCCCCAGAACAAGGAACTAAAGAGAAG...GTTAGAGGCCAGTTTATGCCACAGAGTACATTTCAGGCCAGCCTGGGCTACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CAA 90 bp GGAAGTATGGACTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGACGTGCCGACTCCGGTTaGGCCCATGGTAGAGATAGA +
Preference number: 5 (lower is better)
Translates to: GSMDYMAAFQSTLWFVLRRADSG*AHGRDR
Trigger: TCTATCTCTACCATGGGCCAAACCGGAGTCGGCACG...TCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAGTCCATACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CCA 90 bp AGGGTACCCTTCTTTTGTTTCAGCTGTGTTGTTAGGTTTGCACGCTaGGCTGCTGGGTCAGAGGAATCTCCCTTCTTGGAAACACCTGAA +
Preference number: 5 (lower is better)
Translates to: RVPFFCFSCVVRFAR*AAGSEESPFLETPE
Trigger: TTCAGGTGTTTCCAAGAAGGGAGATTCCTCTGACCCAGCAGCCCAGCGTGCAAACCTAACAACACAGCTGAAACAAAAGAAGGGTACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CCA 90 bp CACGATGTCATACGTAGAGAGTACTTTTGCGTGCCGACTCCGGTTTaGCCCATGGTAGAGATAGATTCTGAGTCTGTTGCTGGTTACACG +
Preference number: 5 (lower is better)
Translates to: HDVIRREYFCVPTPV*PMVEIDSESVAGYT
Trigger: CGTGTAACCAGCAACAGACTCAGAATCTATCTCTACCATGGGCCAAACCGGAGTCGGCACGCAAAAGTACTCTCTACGTATGACATCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CAA 90 bp TTGTGGTTTGTTTTGAGAAAGAGTCTACAACAGGCCAAAGTGGACCTCTCCATCGCTGTGTTGTTAGGTTaGCACGCTGGGCTGCTGGGT +
Preference number: 5 (lower is better)
Translates to: LWFVLRKSLQQAKVDLSIAVLLG*HAGLLG
Trigger: ACCCAGCAGCCCAGCGTGCAAACCTAACAACACAGC...GATGGAGAGGTCCACTTTGGCCTGTTGTAGACTCTTTCTCAAAACAAACCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 90 bp CTTTTGCGTGCCGACTCCGGTTTGGCCCATGGTAGAGATAGATTCTaGGTCTGTTGCTGGTTACACGTTTCTCTACTTCGTTCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: LLRADSGLAHGRDRF*VCCWLHVSLLRSSS
Trigger: ACTGGAAGAACGAAGTAGAGAAACGTGTAACCAGCAACAGACTCAGAATCTATCTCTACCATGGGCCAAACCGGAGTCGGCACGCAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CAA 90 bp GCTTACAAGACGCAGCCTGCCAGCAGGGAAACAGGACAGAGCCTACATAGGCAATCGTTCGAGTGTTTTTaGATTCTTGTTAAGCACCCT +
Preference number: 5 (lower is better)
Translates to: AYKTQPASRETGQSLHRQSFECF*ILVKHP
Trigger: AGGGTGCTTAACAAGAATCAAAAAACACTCGAACGA...TTGCCTATGTAGGCTCTGTCCTGTTTCCCTGCTGGCAGGCTGCGTCTTGTAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CAA 90 bp AATGTACTCTGTGGCATAAACTGGCCTCTAACTCACAATCCCCACTCAGCCTTTTCTGAGACATCGACCTaGGACAAGGTCAGAGCACTG +
Preference number: 5 (lower is better)
Translates to: NVLCGINWPLTHNPHSAFSETST*DKVRAL
Trigger: CAGTGCTCTGACCTTGTCCAAGGTCGATGTCTCAGA...AAAGGCTGAGTGGGGATTGTGAGTTAGAGGCCAGTTTATGCCACAGAGTACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 90 bp ATGTCTGTACTCGAGGGTTTTTCACGTTATGAGCTTCATCCAAAATaGTCCGAGCCCAGACTACCTGAAGCAAAGGTGCTGAGGTACCCT +
Preference number: 5 (lower is better)
Translates to: MSVLEGFSRYELHPK*SEPRLPEAKVLRYP
Trigger: AGGGTACCTCAGCACCTTTGCTTCAGGTAGTCTGGGCTCGGATCATTTTGGATGAAGCTCATAACGTGAAAAACCCTCGAGTACAGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CAA 90 bp GATGTTGATATATCCCTAAATGAAACCATGATGCACAGGCTAAATGAGAGATGCACAGGCCTCCAAGTCTaGGATGGTCCCTGGAGAGGC +
Preference number: 5 (lower is better)
Translates to: DVDISLNETMMHRLNERCTGLQV*DGPWRG
Trigger: GCCTCTCCAGGGACCATCCAAGACTTGGAGGCCTGT...GCATCTCTCATTTAGCCTGTGCATCATGGTTTCATTTAGGGATATATCAACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CAA 90 bp ACAAGCCTCACTTCGAGTAGGATGAAATCTAAGACTCCAGGATCATGGAAAGAGTGGGACCTCTCCCTCTaGCTTCGTTGTAGGAATCTC +
Preference number: 5 (lower is better)
Translates to: TSLTSSRMKSKTPGSWKEWDLSL*LRCRNL
Trigger: GAGATTCCTACAACGAAGCAAGAGGGAGAGGTCCCA...CTCTTTCCATGATCCTGGAGTCTTAGATTTCATCCTACTCGAAGTGAGGCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CAA 90 bp CTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGAAAGAGTCTACAGTCAGTCGGTTCTTCTaGAGGTGCAGTGCTACTACC +
Preference number: 5 (lower is better)
Translates to: LHGCLPEHFVVCFEKESTVSRFF*RCSATT
Trigger: GGTAGTAGCACTGCACCTCAAGAAGAACCGACTGAC...TGTAGACTCTTTCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 90 bp GTAAGATCTTCTCTTCCACTGTCCCCTCACAGACAAACCTGTGTATaGCAACATCCTTCTTCTGTCCTACTCGGTAAATCCGGTCACAAG +
Preference number: 5 (lower is better)
Translates to: VRSSLPLSPHRQTCV*QHPSSVLLGKSGHK
Trigger: CTTGTGACCGGATTTACCGAGTAGGACAGAAGAAGGATGTTGTCATACACAGGTTTGTCTGTGAGGGGACAGTGGAAGAGAAGATCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CAA 90 bp CTACATGGCTGCCTTCCAGAGCACTTTGTGGTTTGTTTTGAGAAAGAGTCTACAATTCTCTGTTTGGGGTaGACAGAGCCATCGATGGTG +
Preference number: 5 (lower is better)
Translates to: LHGCLPEHFVVCFEKESTILCLG*TEPSMV
Trigger: CACCATCGATGGCTCTGTCAACCCCAAACAGAGAAT...TGTAGACTCTTTCTCAAAACAAACCACAAAGTGCTCTGGAAGGCAGCCATGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 90 bp CCCCTCCTTTCATTGAACCATTGTCAACCTGGCTCTTCCAAAGACTaGACTCATCAAATGGGGAGCAACGGAGAAACTTCATCAGTGAAT +
Preference number: 5 (lower is better)
Translates to: PLLSLNHCQPGSSKD*THQMGSNGETSSVN
Trigger: ATTCACTGATGAAGTTTCTCCGTTGCTCCCCATTTGATGAGTTCAGTCTTTGGAAGAGCCAGGTTGACAATGGTTCAATGAAAGGAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CAA 90 bp AATGTACTCTGTGGCATAAACTGGCCTCTAACTCACAATCCCCACTCAGCCTTTAGCCTCCATTCTTTCTaGTCCTGTGGTAGAAACAAA +
Preference number: 5 (lower is better)
Translates to: NVLCGINWPLTHNPHSAFSLHSF*SCGRNK
Trigger: TTTGTTTCTACCACAGGACAAGAAAGAATGGAGGCT...AAAGGCTGAGTGGGGATTGTGAGTTAGAGGCCAGTTTATGCCACAGAGTACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 90 bp GACAAGACTTCAGTGACCGATGCAGCTCATCTATGGCTTCACTCGTaGTTTTCCACACATTATAAAGATGATGTTGGTTCATATGGCCTC +
Preference number: 5 (lower is better)
Translates to: DKTSVTDAAHLWLHS*FSTHYKDDVGSYGL
Trigger: GAGGCCATATGAACCAACATCATCTTTATAATGTGTGGAAAATCACGAGTGAAGCCATAGATGAGCTGCATCGGTCACTGAAGTCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CAA 90 bp CATGCCAGGCTTAATTCTGAAATAACCAATGGGTTTCTATGGCCCACATTACACATCCTGCTGTTAGATTaGGGCTTCTGTTCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: HARLNSEITNGFLWPTLHILLLD*GFCSFL
Trigger: AAGGAAAGAACAGAAGCCCAAATCTAACAGCAGGAT...GTGTAATGTGGGCCATAGAAACCCATTGGTTATTTCAGAATTAAGCCTGGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CAA 90 bp TTGTGGTTTGTTTTGAGAAAGAGTCTACAACAGGCCAAAGTGGACCTCTCCATCTCAGCTTTCTTAGTTTaGGGCTGGAACTTTGATTTC +
Preference number: 5 (lower is better)
Translates to: LWFVLRKSLQQAKVDLSISAFLV*GWNFDF
Trigger: GAAATCAAAGTTCCAGCCCAAAACTAAGAAAGCTGA...GATGGAGAGGTCCACTTTGGCCTGTTGTAGACTCTTTCTCAAAACAAACCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CAA 90 bp CATGCCAGGCTTAATTCTGAAATAACCAATGGGTTTCTATGGCCCACATTACACGAGCTGACCTTGACCTaGCAAGAAAGATGTCATAAA +
Preference number: 5 (lower is better)
Translates to: HARLNSEITNGFLWPTLHELTLT*QERCHK
Trigger: TTTATGACATCTTTCTTGCAAGGTCAAGGTCAGCTC...GTGTAATGTGGGCCATAGAAACCCATTGGTTATTTCAGAATTAAGCCTGGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS-3UTR CAA 90 bp AAGGCGTTTATTAAGACCATACCAATGATAACACAATGTGGTACAATGGCAGAAGACAATGACACTCTTTaGGGACCCTGGGCCTTTTTG +
Preference number: 5 (lower is better)
Translates to: KAFIKTIPMITQCGTMAEDNDTL*GPWAFL
Trigger: CAAAAAGGCCCAGGGTCCCAAAAGAGTGTCATTGTC...TTCTGCCATTGTACCACATTGTGTTATCATTGGTATGGTCTTAATAAACGCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS GCA 72 bp GGCGAAGCCGCAGAAGCTGGGACAGGACATGGACGGTaGTGGGTCTTTGGGAGTCTGCCGCAGGGCAGCCCT +
Preference number: 6 (lower is better)
Translates to: GEAAEAGTGHGR*WVFGSLPQGSP
Trigger: AGGGCTGCCCTGCGGCAGACTCCCAAAGACCCAGCACCGTCCATGTCCTGTCCCAGCTTCTGCGGCTTCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076941.12
ENSMUST00000151697.2
CDS CCA 72 bp GAAGCCGCAGAAGCTGGGACAGGACATGGACGGTGCTaGGTCTTTGGGAGTCTGCCGCAGGGCAGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: EAAEAGTGHGRC*VFGSLPQGSPG
Trigger: CCCAGGGCTGCCCTGCGGCAGACTCCCAAAGACCCAGCACCGTCCATGTCCTGTCCCAGCTTCTGCGGCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076941.12
ENSMUST00000151697.2
CDS CCA 72 bp TGCTGGTGCTTCAGGAACAGGCCTCCAAGTCTTGGATaGTCCCTGGAGAGGCCCCTGAGCGAGCCCCCTCTG +
Preference number: 6 (lower is better)
Translates to: CWCFRNRPPSLG*SLERPLSEPPL
Trigger: CAGAGGGGGCTCGCTCAGGGGCCTCTCCAGGGACCATCCAAGACTTGGAGGCCTGTTCCTGAAGCACCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CCA 72 bp AGAAGCTGGGACAGGACATGGACGGTGCTGGGTCTTTaGGAGTCTGCCGCAGGGCAGCCCTGGGACACACTG +
Preference number: 6 (lower is better)
Translates to: RSWDRTWTVLGL*ESAAGQPWDTL
Trigger: CAGTGTGTCCCAGGGCTGCCCTGCGGCAGACTCCCAAAGACCCAGCACCGTCCATGTCCTGTCCCAGCTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076941.12
ENSMUST00000151697.2
CDS CAA 72 bp CAGAAGCTGGGACAGGACATGGACGGTGCTGGGTCTTaGGGAGTCTGCCGCAGGGCAGCCCTGGGACACACT +
Preference number: 6 (lower is better)
Translates to: QKLGQDMDGAGS*GVCRRAALGHT
Trigger: AGTGTGTCCCAGGGCTGCCCTGCGGCAGACTCCCAAAGACCCAGCACCGTCCATGTCCTGTCCCAGCTTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076941.12
ENSMUST00000151697.2
CDS CCA 72 bp GACGGGGCGTCTCTCACCGACTTCAGCAGAGAAAGATaGCAGCAGCACTGGCGAAGCCGCAGAAGCTGGGAC +
Preference number: 6 (lower is better)
Translates to: DGASLTDFSRER*QQHWRSRRSWD
Trigger: GTCCCAGCTTCTGCGGCTTCGCCAGTGCTGCTGCCATCTTTCTCTGCTGAAGTCGGTGAGAGACGCCCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151697.2
CDS TCA 72 bp CTCCAGTTCTGTGGGGTCCAGAGCCAGCCTTTTCCCTaGCGCAGGATCCCGGCTACAGCCGACTGTGGAGAT +
Preference number: 6 (lower is better)
Translates to: LQFCGVQSQPFP*RRIPATADCGD
Trigger: ATCTCCACAGTCGGCTGTAGCCGGGATCCTGCGTCAGGGAAAAGGCTGGCTCTGGACCCCACAGAACTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151697.2
CDS CCA 72 bp GAAAGATGGCAGCAGCACTGGCGAAGCCGCAGAAGCTaGGACAGGACATGGACGGTGCTGGGTCTTTGGGAG +
Preference number: 6 (lower is better)
Translates to: ERWQQHWRSRRS*DRTWTVLGLWE
Trigger: CTCCCAAAGACCCAGCACCGTCCATGTCCTGTCCCAGCTTCTGCGGCTTCGCCAGTGCTGCTGCCATCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076941.12
ENSMUST00000151697.2
CDS TCA 72 bp CCAACACCGCCAGCCAAGAGGGAGATCAGCATGACCTaGGGTCCCTGGGAGTGGTTAAATGCCTCCACCAGG +
Preference number: 6 (lower is better)
Translates to: PTPPAKREISMT*GPWEWLNASTR
Trigger: CCTGGTGGAGGCATTTAACCACTCCCAGGGACCTCAGGTCATGCTGATCTCCCTCTTGGCTGGCGGTGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 72 bp GCTGGCATCTACGTGCAGGCAGTGCTACCTCCACACTaGGGTTTGCTCCTGGGACCTCTCCCTCTTGCTTCG +
Preference number: 6 (lower is better)
Translates to: AGIYVQAVLPPH*GLLLGPLPLAS
Trigger: CGAAGCAAGAGGGAGAGGTCCCAGGAGCAAACCTCAGTGTGGAGGTAGCACTGCCTGCACGTAGATGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151697.2
CDS GCA 72 bp GTGGGCCATTCCCGAGCAAAGCTCAGGTGCTGCTGGTaGTTCAGGAACAGGCCTCCAAGTCTTGGATGGTCC +
Preference number: 6 (lower is better)
Translates to: VGHSRAKLRCCW*FRNRPPSLGWS
Trigger: GGACCATCCAAGACTTGGAGGCCTGTTCCTGAAGCACCAGCAGCACCTGAGCTTTGCTCGGGAATGGCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS GCA 72 bp GGTGGCATGGTGGGCCATTCCCGAGCAAAGCTCAGGTaGTGCTGGTGCTTCAGGAACAGGCCTCCAAGTCTT +
Preference number: 6 (lower is better)
Translates to: GGMVGHSRAKLR*CWCFRNRPPSL
Trigger: AAGACTTGGAGGCCTGTTCCTGAAGCACCAGCAGCACCTGAGCTTTGCTCGGGAATGGCCCACCATGCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CCA 72 bp AGAGCCGACTTCAGCAGAGAAAGATGGCAGCAGCACTaGCGAAGCCGCAGAAGCTGGGACAGGACATGGACG +
Preference number: 6 (lower is better)
Translates to: RADFSRERWQQH*RSRRSWDRTWT
Trigger: CGTCCATGTCCTGTCCCAGCTTCTGCGGCTTCGCCAGTGCTGCTGCCATCTTTCTCTGCTGAAGTCGGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CCA 72 bp GCCCGCTCGTCCTCAGAAAGCTTTAACCGGTGCAGCTaGCATCTACGTGCAGGCAGTGCTACCTCCACACTG +
Preference number: 6 (lower is better)
Translates to: ARSSSESFNRCS*HLRAGSATSTL
Trigger: CAGTGTGGAGGTAGCACTGCCTGCACGTAGATGCCAGCTGCACCGGTTAAAGCTTTCTGAGGACGAGCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151697.2
CDS CCA 72 bp CTCACCGACTTCAGCAGAGAAAGATGGCAGCAGCACTaGCGAAGCCGCAGAAGCTGGGACAGGACATGGACG +
Preference number: 6 (lower is better)
Translates to: LTDFSRERWQQH*RSRRSWDRTWT
Trigger: CGTCCATGTCCTGTCCCAGCTTCTGCGGCTTCGCCAGTGCTGCTGCCATCTTTCTCTGCTGAAGTCGGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151697.2
CDS TCA 72 bp GAGGTACCAAGTGGAGAGGGGCAGCAGCAGCTTTGGTaGTGTTGCTCTGCTCTGGTTCCTGAGCGCTGCACT +
Preference number: 6 (lower is better)
Translates to: EVPSGEGQQQLW*CCSALVPERCT
Trigger: AGTGCAGCGCTCAGGAACCAGAGCAGAGCAACATCACCAAAGCTGCTGCTGCCCCTCTCCACTTGGTACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CCA 72 bp ATGGTGGGCCATTCCCGAGCAAAGCTCAGGTGCTGCTaGTGCTTCAGGAACAGGCCTCCAAGTCTTGGATGG +
Preference number: 6 (lower is better)
Translates to: MVGHSRAKLRCC*CFRNRPPSLGW
Trigger: CCATCCAAGACTTGGAGGCCTGTTCCTGAAGCACCAGCAGCACCTGAGCTTTGCTCGGGAATGGCCCACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 72 bp GCTCTGAGACATCGACCTTGGACAAGGTCAGAGCACTaGGCTGTTCTTCCAGGGACAGGACAAGGCCTTCGC +
Preference number: 6 (lower is better)
Translates to: ALRHRPWTRSEH*AVLPGTGQGLR
Trigger: GCGAAGGCCTTGTCCTGTCCCTGGAAGAACAGCTCAGTGCTCTGACCTTGTCCAAGGTCGATGTCTCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076941.12
ENSMUST00000151697.2
CDS GCA 72 bp GCCTACTGGAAACACCATCATCTTCGCTGTCCTCACTaGTGGAGGTGGCATGGTGGGCCATTCCCGAGCAAA +
Preference number: 6 (lower is better)
Translates to: AYWKHHHLRCPH*WRWHGGPFPSK
Trigger: TTTGCTCGGGAATGGCCCACCATGCCACCTCCAGCAGTGAGGACAGCGAAGATGATGGTGTTTCCAGTAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS GCA 72 bp TTGGGACCCTGGGCCTTTTTGGATCGCCTCCAGTTCTaGCAGCAGAGAAGACACCTTGGTGCTCCTTCGTGT +
Preference number: 6 (lower is better)
Translates to: LGPWAFLDRLQF*QQRRHLGAPSC
Trigger: ACACGAAGGAGCACCAAGGTGTCTTCTCTGCTGGCAGAACTGGAGGCGATCCAAAAAGGCCCAGGGTCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS GCA 72 bp TCTACGTGCAGGCAGTGCTACCTCCACACTGAGGTTTaGTCCTGGGACCTCTCCCTCTTGCTTCGTTGTAGG +
Preference number: 6 (lower is better)
Translates to: STCRQCYLHTEV*SWDLSLLLRCR
Trigger: CCTACAACGAAGCAAGAGGGAGAGGTCCCAGGAGCAAACCTCAGTGTGGAGGTAGCACTGCCTGCACGTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151697.2
CDS CCA 72 bp GCCCGCTCGTCCTCAGAAAGCTTTAACCGGTGCAGCTaGCATCTACGTGCAGGCAGTGCTACCAGAGGTTTA +
Preference number: 6 (lower is better)
Translates to: ARSSSESFNRCS*HLRAGSATRGL
Trigger: TAAACCTCTGGTAGCACTGCCTGCACGTAGATGCCAGCTGCACCGGTTAAAGCTTTCTGAGGACGAGCGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CAA 90 bp GTTAGGTTTGCACGCTGGGCTGCTGGGTCAGAGGAATCTCCCTTCTaGGAAACACCTGAAGCAGCAGGCATCTGTCTCTGCACACTCTGG +
Preference number: 6 (lower is better)
Translates to: VRFARWAAGSEESPF*ETPEAAGICLCTLW
Trigger: CCAGAGTGTGCAGAGACAGATGCCTGCTGCTTCAGGTGTTTCCAAGAAGGGAGATTCCTCTGACCCAGCAGCCCAGCGTGCAAACCTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CAA 90 bp GTTGCTCTGCTCTGGTTCCTGAGCGCTGCACTTCTCTTTAGTTCCTaGTTCTGGGGAGAGAGCCAGAGCACTGAGTGCGTCCTCCAAAGC +
Preference number: 6 (lower is better)
Translates to: VALLWFLSAALLFSS*FWGESQSTECVLQS
Trigger: GCTTTGGAGGACGCACTCAGTGCTCTGGCTCTCTCCCCAGAACAAGGAACTAAAGAGAAGTGCAGCGCTCAGGAACCAGAGCAGAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 72 bp CTCTGGCTTGTTCGGGACCCCTCGACTCTCACTCTCTaGCATGTGAGGACCCTTGGGTATTCCTTGAAGCAC +
Preference number: 6 (lower is better)
Translates to: LWLVRDPSTLTL*HVRTLGYSLKH
Trigger: GTGCTTCAAGGAATACCCAAGGGTCCTCACATGTCAGAGAGTGAGAGTCGAGGGGTCCCGAACAAGCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 72 bp GCAGGCATCTGTCTCTGCACACTCTGGTCAGAATGCTaGAGGCTCCCCTTCTTCTGTGAGTCCACAGTCGAG +
Preference number: 6 (lower is better)
Translates to: AGICLCTLWSEC*RLPFFCESTVE
Trigger: CTCGACTGTGGACTCACAGAAGAAGGGGAGCCTTCAGCATTCTGACCAGAGTGTGCAGAGACAGATGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 72 bp AGGTGCAGTGCTACTACCTGCAGCATGCTGGTCCACTaGGAGACAATGACACTCTTTTGGGACCCTGGGCCT +
Preference number: 6 (lower is better)
Translates to: RCSATTCSMLVH*ETMTLFWDPGP
Trigger: AGGCCCAGGGTCCCAAAAGAGTGTCATTGTCTCTCAGTGGACCAGCATGCTGCAGGTAGTAGCACTGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 72 bp AGCCATCGATGGTGGCGTAAGTCAGTCGGTTCTTCTTaGGGTGCAGTGCTACTACCTGCAGCATGCTGGTCC +
Preference number: 6 (lower is better)
Translates to: SHRWWRKSVGSS*GAVLLPAACWS
Trigger: GGACCAGCATGCTGCAGGTAGTAGCACTGCACCTCAAGAAGAACCGACTGACTTACGCCACCATCGATGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS GCA 72 bp GGTGGCGTAAGTCAGTCGGTTCTTCTTGAGGTGCAGTaGTACTACCTGCAGCATGCTGGTCCACTGAGAGAC +
Preference number: 6 (lower is better)
Translates to: GGVSQSVLLEVQ*YYLQHAGPLRD
Trigger: GTCTCTCAGTGGACCAGCATGCTGCAGGTAGTAGCACTGCACCTCAAGAAGAACCGACTGACTTACGCCACC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CCA 72 bp TACAGAGAGTTCTTTAGGGTTAGGATCCTGCCGCCATaGGACGTTTCCACACCACTGCTTCCCCTCCGCCTT +
Preference number: 6 (lower is better)
Translates to: YREFFRVRILPP*DVSTPLLPLRL
Trigger: AAGGCGGAGGGGAAGCAGTGGTGTGGAAACGTCCCATGGCGGCAGGATCCTAACCCTAAAGAACTCTCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CCA 72 bp CCCCTCGACTCTCACTCTCTGACATGTGAGGACCCTTaGGTATTCCTTGAAGCACCTCTCCATGGCCTTGCT +
Preference number: 6 (lower is better)
Translates to: PLDSHSLTCEDP*VFLEAPLHGLA
Trigger: AGCAAGGCCATGGAGAGGTGCTTCAAGGAATACCCAAGGGTCCTCACATGTCAGAGAGTGAGAGTCGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CCA 72 bp TACTGGAAACACCATCATCTTCGCTGTCCTCACTGCTaGAGGTGGCATGGTGGGCCATTCCCGAGCAAAGCT +
Preference number: 6 (lower is better)
Translates to: YWKHHHLRCPHC*RWHGGPFPSKA
Trigger: AGCTTTGCTCGGGAATGGCCCACCATGCCACCTCCAGCAGTGAGGACAGCGAAGATGATGGTGTTTCCAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CCA 72 bp GGATCGCCTCCAGTTCTGCCAGCAGAGAAGACACCTTaGTGCTCCTTCGTGTGTCATCAAAAAGCTCCGCCT +
Preference number: 6 (lower is better)
Translates to: GSPPVLPAEKTP*CSFVCHQKAPP
Trigger: AGGCGGAGCTTTTTGATGACACACGAAGGAGCACCAAGGTGTCTTCTCTGCTGGCAGAACTGGAGGCGATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CAA 72 bp CTCTGGTTCCTGAGCGCTGCACTTCTCTTTAGTTCCTaGTTCTGGGGAGAGAGCCAGAGCACTGAGTGCGTC +
Preference number: 6 (lower is better)
Translates to: LWFLSAALLFSS*FWGESQSTECV
Trigger: GACGCACTCAGTGCTCTGGCTCTCTCCCCAGAACAAGGAACTAAAGAGAAGTGCAGCGCTCAGGAACCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CAA 72 bp AGGCTAACCGTGGGTGATGGCTCTGAGACATCGACCTaGGACAAGGTCAGAGCACTGAGCTGTTCTTCCAGG +
Preference number: 6 (lower is better)
Translates to: RLTVGDGSETST*DKVRALSCSSR
Trigger: CCTGGAAGAACAGCTCAGTGCTCTGACCTTGTCCAAGGTCGATGTCTCAGAGCCATCACCCACGGTTAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CAA 72 bp TGGATCGCCTCCAGTTCTGCCAGCAGAGAAGACACCTaGGTGCTCCTTCGTGTGTCATCAAAAAGCTCCGCC +
Preference number: 6 (lower is better)
Translates to: WIASSSASREDT*VLLRVSSKSSA
Trigger: GGCGGAGCTTTTTGATGACACACGAAGGAGCACCAAGGTGTCTTCTCTGCTGGCAGAACTGGAGGCGATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CAA 90 bp GTTGTTCTGAATGGGGGTTCCAGTGACAGCCCACCGGGCCTGGGCTaGGAGCTTACACACAGCAATGGATGTCTGTACTCGAGGGTTTTT +
Preference number: 6 (lower is better)
Translates to: VVLNGGSSDSPPGLG*ELTHSNGCLYSRVF
Trigger: AAAAACCCTCGAGTACAGACATCCATTGCTGTGTGTAAGCTCCAAGCCCAGGCCCGGTGGGCTGTCACTGGAACCCCCATTCAGAACAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CAA 90 bp GTGCCATTAAGGCTAACCGTGGGTGATGGCTCTGAGACATCGACCTaGGACAAGGTCAGAGCACTGAGCTGTTCTTCCAGGGACAGGACA +
Preference number: 6 (lower is better)
Translates to: VPLRLTVGDGSETST*DKVRALSCSSRDRT
Trigger: TGTCCTGTCCCTGGAAGAACAGCTCAGTGCTCTGACCTTGTCCAAGGTCGATGTCTCAGAGCCATCACCCACGGTTAGCCTTAATGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CAA 90 bp GGTCCACTGAGAGACAATGACACTCTTTTGGGACCCTGGGCCTTTTaGGATCGCCTCCAGTTCTGCCAGCAGAGAAGACACCTTGGTGCT +
Preference number: 6 (lower is better)
Translates to: GPLRDNDTLLGPWAF*DRLQFCQQRRHLGA
Trigger: AGCACCAAGGTGTCTTCTCTGCTGGCAGAACTGGAGGCGATCCAAAAAGGCCCAGGGTCCCAAAAGAGTGTCATTGTCTCTCAGTGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CAA 90 bp TACTACCTGCAGCATGCTGGTCCACTGAGAGACAATGACACTCTTTaGGGACCCTGGGCCTTTTTGGATCGCCTCCAGTTCTGCCAGCAG +
Preference number: 6 (lower is better)
Translates to: YYLQHAGPLRDNDTL*GPWAFLDRLQFCQQ
Trigger: CTGCTGGCAGAACTGGAGGCGATCCAAAAAGGCCCAGGGTCCCAAAAGAGTGTCATTGTCTCTCAGTGGACCAGCATGCTGCAGGTAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 72 bp GTCACCTCCAGACTGTCTAGTTGCCACCAGGTCAGATaGGGGGTCCTTCTCCATCCTGCTGTTAGATTTGGG +
Preference number: 6 (lower is better)
Translates to: VTSRLSSCHQVR*GVLLHPAVRFG
Trigger: CCCAAATCTAACAGCAGGATGGAGAAGGACCCCTCATCTGACCTGGTGGCAACTAGACAGTCTGGAGGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 72 bp ACTCTGGTCAGAATGCTGAAGGCTCCCCTTCTTCTGTaGGTCCACAGTCGAGTCAAAGAGAAGTGGGGACCC +
Preference number: 6 (lower is better)
Translates to: TLVRMLKAPLLL*VHSRVKEKWGP
Trigger: GGGTCCCCACTTCTCTTTGACTCGACTGTGGACTCACAGAAGAAGGGGAGCCTTCAGCATTCTGACCAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 72 bp TGCTGGGTCAGAGGAATCTCCCTTCTTGGAAACACCTaGAGCAGCAGGCATCTGTCTCTGCACACTCTGGTC +
Preference number: 6 (lower is better)
Translates to: CWVRGISLLGNT*SSRHLSLHTLV
Trigger: GACCAGAGTGTGCAGAGACAGATGCCTGCTGCTTCAGGTGTTTCCAAGAAGGGAGATTCCTCTGACCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS GCA 72 bp GCCAGAGCACTGAGTGCGTCCTCCAAAGCCTGGATTTaGTTAAGCAACTTCTCACCCTTATCAGGGAGAGCC +
Preference number: 6 (lower is better)
Translates to: ARALSASSKAWI*LSNFSPLSGRA
Trigger: GGCTCTCCCTGATAAGGGTGAGAAGTTGCTTAAGCAAATCCAGGCTTTGGAGGACGCACTCAGTGCTCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CCA 72 bp CCTGCTGACGTGTCCCTCTTTCTGGACCTTGCTTTCTaGGTTCTGACCAGGAACACTTGGCACCAAAAGCTG +
Preference number: 6 (lower is better)
Translates to: PADVSLFLDLAF*VLTRNTWHQKL
Trigger: CAGCTTTTGGTGCCAAGTGTTCCTGGTCAGAACCCAGAAAGCAAGGTCCAGAAAGAGGGACACGTCAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CCA 72 bp CCCACCGGGCCTGGGCTTGGAGCTTACACACAGCAATaGATGTCTGTACTCGAGGGTTTTTCACGTTATGAG +
Preference number: 6 (lower is better)
Translates to: PTGPGLGAYTQQ*MSVLEGFSRYE
Trigger: CTCATAACGTGAAAAACCCTCGAGTACAGACATCCATTGCTGTGTGTAAGCTCCAAGCCCAGGCCCGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CCA 72 bp GAGACAATGACACTCTTTTGGGACCCTGGGCCTTTTTaGATCGCCTCCAGTTCTGCCAGCAGAGAAGACACC +
Preference number: 6 (lower is better)
Translates to: ETMTLFWDPGPF*IASSSASREDT
Trigger: GGTGTCTTCTCTGCTGGCAGAACTGGAGGCGATCCAAAAAGGCCCAGGGTCCCAAAAGAGTGTCATTGTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CAA 90 bp GGATGTTCACTGCAGCCAGGGTACCCTTCTTTTGTTTCAGCTGTGTaGTTAGGTTTGCACGCTGGGCTGCTGGGTCAGAGGAATCTCCCT +
Preference number: 6 (lower is better)
Translates to: GCSLQPGYPSFVSAV*LGLHAGLLGQRNLP
Trigger: AGGGAGATTCCTCTGACCCAGCAGCCCAGCGTGCAAACCTAACAACACAGCTGAAACAAAAGAAGGGTACCCTGGCTGCAGTGAACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 72 bp AAATGGGTTTCTCGGCTGGCTGGGAGAGTGAAGCTGTaGCTCAGATGGCTGCTGAGGCTTACTGGTTACAGA +
Preference number: 6 (lower is better)
Translates to: KWVSRLAGRVKL*LRWLLRLTGYR
Trigger: TCTGTAACCAGTAAGCCTCAGCAGCCATCTGAGTCACAGCTTCACTCTCCCAGCCAGCCGAGAAACCCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 72 bp GGGACACACTGGATCCAAACTCCTGAGCCACTCTACTaGATGGATTATCAGGGCTTCTTCCATGGTGGCTGC +
Preference number: 6 (lower is better)
Translates to: GTHWIQTPEPLY*MDYQGFFHGGC
Trigger: GCAGCCACCATGGAAGAAGCCCTGATAATCCATTCAGTAGAGTGGCTCAGGAGTTTGGATCCAGTGTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076941.12
ENSMUST00000151697.2
CDS TCA 72 bp CTACTACCTGCAGCATGCTGGTCCACTGAGAGACAATaGCACTCTTTTGGGACCCTGGGCCTTTTTGGATCG +
Preference number: 6 (lower is better)
Translates to: LLPAACWSTERQ*HSFGTLGLFGS
Trigger: CGATCCAAAAAGGCCCAGGGTCCCAAAAGAGTGTCATTGTCTCTCAGTGGACCAGCATGCTGCAGGTAGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CCA 72 bp CCTCATGCAATAAACAGTGAGAAACAGGAATATCGGTaGCCTGCACGAAGCCGCATGTGTTCGTCCGGCACA +
Preference number: 6 (lower is better)
Translates to: PHAINSEKQEYR*PARSRMCSSGT
Trigger: TGTGCCGGACGAACACATGCGGCTTCGTGCAGGCCACCGATATTCCTGTTTCTCACTGTTTATTGCATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CAA 72 bp AGCCAGAGCACTGAGTGCGTCCTCCAAAGCCTGGATTaGCTTAAGCAACTTCTCACCCTTATCAGGGAGAGC +
Preference number: 6 (lower is better)
Translates to: SQSTECVLQSLD*LKQLLTLIRES
Trigger: GCTCTCCCTGATAAGGGTGAGAAGTTGCTTAAGCAAATCCAGGCTTTGGAGGACGCACTCAGTGCTCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CAA 72 bp AGAGACAATGACACTCTTTTGGGACCCTGGGCCTTTTaGGATCGCCTCCAGTTCTGCCAGCAGAGAAGACAC +
Preference number: 6 (lower is better)
Translates to: RDNDTLLGPWAF*DRLQFCQQRRH
Trigger: GTGTCTTCTCTGCTGGCAGAACTGGAGGCGATCCAAAAAGGCCCAGGGTCCCAAAAGAGTGTCATTGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CAA 90 bp GGGCCTTTTTGGATCGCCTCCAGTTCTGCCAGCAGAGAAGACACCTaGGTGCTCCTTCGTGTGTCATCAAAAAGCTCCGCCTTGAAACAT +
Preference number: 6 (lower is better)
Translates to: GPFWIASSSASREDT*VLLRVSSKSSALKH
Trigger: ATGTTTCAAGGCGGAGCTTTTTGATGACACACGAAGGAGCACCAAGGTGTCTTCTCTGCTGGCAGAACTGGAGGCGATCCAAAAAGGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CAA 90 bp GTCCCTCTTTCTGGACCTTGCTTTCTGGGTTCTGACCAGGAACACTaGGCACCAAAAGCTGGGTTTCCTTTTCTCTCAGAGTCTCTGGCT +
Preference number: 6 (lower is better)
Translates to: VPLSGPCFLGSDQEH*APKAGFPFLSESLA
Trigger: AGCCAGAGACTCTGAGAGAAAAGGAAACCCAGCTTTTGGTGCCAAGTGTTCCTGGTCAGAACCCAGAAAGCAAGGTCCAGAAAGAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CAA 90 bp GAAGACACCTTGGTGCTCCTTCGTGTGTCATCAAAAAGCTCCGCCTaGAAACATGTGCCATTAAGGCTAACCGTGGGTGATGGCTCTGAG +
Preference number: 6 (lower is better)
Translates to: EDTLVLLRVSSKSSA*KHVPLRLTVGDGSE
Trigger: CTCAGAGCCATCACCCACGGTTAGCCTTAATGGCACATGTTTCAAGGCGGAGCTTTTTGATGACACACGAAGGAGCACCAAGGTGTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS GCA 72 bp CTTCTCACCCTTATCAGGGAGAGCCTGGATGTTCACTaGAGCCAGGGTACCCTTCTTTTGTTTCAGCTGTGT +
Preference number: 6 (lower is better)
Translates to: LLTLIRESLDVH*SQGTLLLFQLC
Trigger: ACACAGCTGAAACAAAAGAAGGGTACCCTGGCTGCAGTGAACATCCAGGCTCTCCCTGATAAGGGTGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CCA 72 bp CACACTGGATCCAAACTCCTGAGCCACTCTACTGAATaGATTATCAGGGCTTCTTCCATGGTGGCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: HTGSKLLSHSTE*IIRASSMVAAS
Trigger: AGAGGCAGCCACCATGGAAGAAGCCCTGATAATCCATTCAGTAGAGTGGCTCAGGAGTTTGGATCCAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076941.12
ENSMUST00000151697.2
CDS TCA 72 bp TTCTGCTACTGCTGTTTCACCCGGACAAGACTTCAGTaGCCGATGCAGCTCATCTATGGCTTCACTCGTGAT +
Preference number: 6 (lower is better)
Translates to: FCYCCFTRTRLQ*PMQLIYGFTRD
Trigger: ATCACGAGTGAAGCCATAGATGAGCTGCATCGGTCACTGAAGTCTTGTCCGGGTGAAACAGCAGTAGCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 72 bp TTGCTGGTTACACGTTTCTCTACTTCGTTCTTCCAGTaGTGGATCAGGGAAGCGGGGCAGACGATCAGTGTT +
Preference number: 6 (lower is better)
Translates to: LLVTRFSTSFFQ*WIREAGQTISV
Trigger: AACACTGATCGTCTGCCCCGCTTCCCTGATCCATCACTGGAAGAACGAAGTAGAGAAACGTGTAACCAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 72 bp GCCGACTCCGGTTTGGCCCATGGTAGAGATAGATTCTaGGTCTGTTGCTGGTTACACGTTTCTCTACTTCGT +
Preference number: 6 (lower is better)
Translates to: ADSGLAHGRDRF*VCCWLHVSLLR
Trigger: ACGAAGTAGAGAAACGTGTAACCAGCAACAGACTCAGAATCTATCTCTACCATGGGCCAAACCGGAGTCGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS GCA 72 bp ACTGCTGTTTCACCCGGACAAGACTTCAGTGACCGATaGAGCTCATCTATGGCTTCACTCGTGATTTTCCAC +
Preference number: 6 (lower is better)
Translates to: TAVSPGQDFSDR*SSSMASLVIFH
Trigger: GTGGAAAATCACGAGTGAAGCCATAGATGAGCTGCATCGGTCACTGAAGTCTTGTCCGGGTGAAACAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CCA 72 bp GGCAGTGCTACCAGAGGTTTACCAGTGGAATCCAGCTaGTCTTTTGTTCTCCTCAGCAAAAGGCTCTTGGTT +
Preference number: 6 (lower is better)
Translates to: GSATRGLPVESS*SFVLLSKRLLV
Trigger: AACCAAGAGCCTTTTGCTGAGGAGAACAAAAGACCAGCTGGATTCCACTGGTAAACCTCTGGTAGCACTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CAA 72 bp TCTGGACCTTGCTTTCTGGGTTCTGACCAGGAACACTaGGCACCAAAAGCTGGGTTTCCTTTTCTCTCAGAG +
Preference number: 6 (lower is better)
Translates to: SGPCFLGSDQEH*APKAGFPFLSE
Trigger: CTCTGAGAGAAAAGGAAACCCAGCTTTTGGTGCCAAGTGTTCCTGGTCAGAACCCAGAAAGCAAGGTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CAA 90 bp CAGACGATCAGTGTTCCACTGGAAGTAAAGACAGAGGAGTCATTCTaGGAAAGCCACGTCACAGGCTCGCTTCTCTCCTTTTCCTTGCTT +
Preference number: 6 (lower is better)
Translates to: QTISVPLEVKTEESF*ESHVTGSLLSFSLL
Trigger: AAGCAAGGAAAAGGAGAGAAGCGAGCCTGTGACGTGGCTTTCCAAGAATGACTCCTCTGTCTTTACTTCCAGTGGAACACTGATCGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 72 bp CTCGAGGGTTTTTCACGTTATGAGCTTCATCCAAAATaGTCCGAGCCCAGACTACCTGAAGCAAAGGTGCTG +
Preference number: 6 (lower is better)
Translates to: LEGFSRYELHPK*SEPRLPEAKVL
Trigger: CAGCACCTTTGCTTCAGGTAGTCTGGGCTCGGATCATTTTGGATGAAGCTCATAACGTGAAAAACCCTCGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 72 bp TACTCGGTAAATCCGGTCACAAGCTTGGTCTTCAAGTaGGGGATTCCAGTGCATGTCCAGAAGGAAAAGGTG +
Preference number: 6 (lower is better)
Translates to: YSVNPVTSLVFK*GIPVHVQKEKV
Trigger: CACCTTTTCCTTCTGGACATGCACTGGAATCCCTCACTTGAAGACCAAGCTTGTGACCGGATTTACCGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CCA 72 bp TTCTTTTGTTTCAGCTGTGTTGTTAGGTTTGCACGCTaGGCTGCTGGGTCAGAGGAATCTCCCTTCTTGGAA +
Preference number: 6 (lower is better)
Translates to: FFCFSCVVRFAR*AAGSEESPFLE
Trigger: TTCCAAGAAGGGAGATTCCTCTGACCCAGCAGCCCAGCGTGCAAACCTAACAACACAGCTGAAACAAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CCA 72 bp ATACGTAGAGAGTACTTTTGCGTGCCGACTCCGGTTTaGCCCATGGTAGAGATAGATTCTGAGTCTGTTGCT +
Preference number: 6 (lower is better)
Translates to: IRREYFCVPTPV*PMVEIDSESVA
Trigger: AGCAACAGACTCAGAATCTATCTCTACCATGGGCCAAACCGGAGTCGGCACGCAAAAGTACTCTCTACGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CAA 72 bp AGTGTTCCACTGGAAGTAAAGACAGAGGAGTCATTCTaGGAAAGCCACGTCACAGGCTCGCTTCTCTCCTTT +
Preference number: 6 (lower is better)
Translates to: SVPLEVKTEESF*ESHVTGSLLSF
Trigger: AAAGGAGAGAAGCGAGCCTGTGACGTGGCTTTCCAAGAATGACTCCTCTGTCTTTACTTCCAGTGGAACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CAA 72 bp TTGGTGCTCCTTCGTGTGTCATCAAAAAGCTCCGCCTaGAAACATGTGCCATTAAGGCTAACCGTGGGTGAT +
Preference number: 6 (lower is better)
Translates to: LVLLRVSSKSSA*KHVPLRLTVGD
Trigger: ATCACCCACGGTTAGCCTTAATGGCACATGTTTCAAGGCGGAGCTTTTTGATGACACACGAAGGAGCACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CAA 90 bp TCTCCATGGCCTTGCTTGGAAGCCATTCCTTCAGCTTTCTTAGTTTaGGGCTGGAACTTTGATTTCTCTTGTTCTTCCCTGTCACCTCCA +
Preference number: 6 (lower is better)
Translates to: SPWPCLEAIPSAFLV*GWNFDFSCSSLSPP
Trigger: TGGAGGTGACAGGGAAGAACAAGAGAAATCAAAGTTCCAGCCCAAAACTAAGAAAGCTGAAGGAATGGCTTCCAAGCAAGGCCATGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CAA 90 bp CAGGCAGTGCTACCAGAGGTTTACCAGTGGAATCCAGCTGGTCTTTaGTTCTCCTCAGCAAAAGGCTCTTGGTTAAAATGCTTAACCGTT +
Preference number: 6 (lower is better)
Translates to: QAVLPEVYQWNPAGL*FSSAKGSWLKCLTV
Trigger: AACGGTTAAGCATTTTAACCAAGAGCCTTTTGCTGAGGAGAACAAAAGACCAGCTGGATTCCACTGGTAAACCTCTGGTAGCACTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 72 bp TCTCTTCCACTGTCCCCTCACAGACAAACCTGTGTATaGCAACATCCTTCTTCTGTCCTACTCGGTAAATCC +
Preference number: 6 (lower is better)
Translates to: SLPLSPHRQTCV*QHPSSVLLGKS
Trigger: GGATTTACCGAGTAGGACAGAAGAAGGATGTTGTCATACACAGGTTTGTCTGTGAGGGGACAGTGGAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS GCA 72 bp AGTAGTAATCACGATGTCATACGTAGAGAGTACTTTTaGGTGCCGACTCCGGTTTGGCCCATGGTAGAGATA +
Preference number: 6 (lower is better)
Translates to: SSNHDVIRREYF*VPTPVWPMVEI
Trigger: TATCTCTACCATGGGCCAAACCGGAGTCGGCACGCAAAAGTACTCTCTACGTATGACATCGTGATTACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CCA 72 bp AACCGTTCCCCTCCTTTCATTGAACCATTGTCAACCTaGCTCTTCCAAAGACTGAACTCATCAAATGGGGAG +
Preference number: 6 (lower is better)
Translates to: NRSPPFIEPLST*LFQRLNSSNGE
Trigger: CTCCCCATTTGATGAGTTCAGTCTTTGGAAGAGCCAGGTTGACAATGGTTCAATGAAAGGAGGGGAACGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CAA 72 bp ACCCTTGGGTATTCCTTGAAGCACCTCTCCATGGCCTaGCTTGGAAGCCATTCCTTCAGCTTTCTTAGTTTT +
Preference number: 6 (lower is better)
Translates to: TLGYSLKHLSMA*LGSHSFSFLSF
Trigger: AAAACTAAGAAAGCTGAAGGAATGGCTTCCAAGCAAGGCCATGGAGAGGTGCTTCAAGGAATACCCAAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 72 bp CTCCATTCTTTCTTGTCCTGTGGTAGAAACAAACCCTaGAGCTCGACCACAAACTCCTCATGCAATAAACAG +
Preference number: 6 (lower is better)
Translates to: LHSFLSCGRNKP*SSTTNSSCNKQ
Trigger: CTGTTTATTGCATGAGGAGTTTGTGGTCGAGCTTCAGGGTTTGTTTCTACCACAGGACAAGAAAGAATGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS TCA 72 bp TCATTGAACCATTGTCAACCTGGCTCTTCCAAAGACTaGACTCATCAAATGGGGAGCAACGGAGAAACTTCA +
Preference number: 6 (lower is better)
Translates to: SLNHCQPGSSKD*THQMGSNGETS
Trigger: TGAAGTTTCTCCGTTGCTCCCCATTTGATGAGTTCAGTCTTTGGAAGAGCCAGGTTGACAATGGTTCAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CAA 72 bp CCTTGCTTGGAAGCCATTCCTTCAGCTTTCTTAGTTTaGGGCTGGAACTTTGATTTCTCTTGTTCTTCCCTG +
Preference number: 6 (lower is better)
Translates to: PCLEAIPSAFLV*GWNFDFSCSSL
Trigger: CAGGGAAGAACAAGAGAAATCAAAGTTCCAGCCCAAAACTAAGAAAGCTGAAGGAATGGCTTCCAAGCAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CAA 72 bp AAAATGCTTAACCGTTCCCCTCCTTTCATTGAACCATaGTCAACCTGGCTCTTCCAAAGACTGAACTCATCA +
Preference number: 6 (lower is better)
Translates to: KMLNRSPPFIEP*STWLFQRLNSS
Trigger: TGATGAGTTCAGTCTTTGGAAGAGCCAGGTTGACAATGGTTCAATGAAAGGAGGGGAACGGTTAAGCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12
CDS CAA 72 bp ACCTTCTTCGACAAACTGTTTTCGTTCGAGTGTTTTTaGATTCTTGTTAAGCACCCTAAATGGGTTTCTCGG +
Preference number: 6 (lower is better)
Translates to: TFFDKLFSFECF*ILVKHPKWVSR
Trigger: CCGAGAAACCCATTTAGGGTGCTTAACAAGAATCAAAAAACACTCGAACGAAAACAGTTTGTCGAAGAAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076941.12