Pregenerated sensors for TTF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026803Ensembl transcript IDs: ENSMUST00000100237.4
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GACCACTTTGACCTCCCGCTCCTCCTACCCCACATGAATGCTGGGTaGATTAGTGCATTCCACCTGACTACTCCGTTATCTGCACATCTG | + |
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Preference number: 1 (lower is better) Translates to: DHFDLPLLLPHMNAG*ISAFHLTTPLSAHL Trigger: CAGATGTGCAGATAACGGAGTAGTCAGGTGGAATGCACTAATGCACCCAGCATTCATGTGGGGTAGGAGGAGCGGGAGGTCAAAGTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR TCA 90 bp | ATCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCCGGACCTTCGGGAGAGCAATCGGGTGCTCTTACCCACT | + |
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Preference number: 1 (lower is better) Translates to: ILLQMVVSHHVVAGI*TPDLRESNRVLLPT Trigger: AGTGGGTAAGAGCACCCGATTGCTCTCCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR CCA 90 bp | GGAGACAGAAGATTGCTGAGTGGCACCAACGTAGACAGCAGTATATaGGCGGTTTCATTAGCCTCACTTTCCCTTCTGTCTCCCCAGCAC | + |
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Preference number: 1 (lower is better) Translates to: GDRRLLSGTNVDSSI*AVSLASLSLLSPQH Trigger: GTGCTGGGGAGACAGAAGGGAAAGTGAGGCTAATGAAACCGCCCATATACTGCTGTCTACGTTGGTGCCACTCAGCAATCTTCTGTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR CCA 90 bp | GAGTCAGATCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCCGGACCTTCGGGAGAGCAATCGGGTGCTCTT | + |
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Preference number: 1 (lower is better) Translates to: ESDLVTDGCEPPCGC*DLNSGPSGEQSGAL Trigger: AAGAGCACCCGATTGCTCTCCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAGATCTGACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR TCA 90 bp | GGTCACACATGGACACATTTCTCTGCAGGGCAACAACAGACAGCCTaGGTATGGGAACAGCTAGAAGGAACACAGGGAAATTGGGGCTTG | + |
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Preference number: 1 (lower is better) Translates to: GHTWTHFSAGQQQTA*VWEQLEGTQGNWGL Trigger: CAAGCCCCAATTTCCCTGTGTTCCTTCTAGCTGTTCCCATACTCAGGCTGTCTGTTGTTGCCCTGCAGAGAAATGTGTCCATGTGTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR GCA 90 bp | AGAAGGAACACAGGGAAATTGGGGCTTGCAGAGCTAGAGCTTCTCTaGAGTACTCTCCTGCTCTCTGGGCAATGCACTTCTCCTTTTGGA | + |
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Preference number: 1 (lower is better) Translates to: RRNTGKLGLAELELL*STLLLSGQCTSPFG Trigger: TCCAAAAGGAGAAGTGCATTGCCCAGAGAGCAGGAGAGTACTGCAGAGAAGCTCTAGCTCTGCAAGCCCCAATTTCCCTGTGTTCCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR-3UTR TCA 90 bp | CACCCTGGCCTAGAGCCTGCTATTTGTAAGGACCACTTTGACCTCCCGCTCCTCCCTTTCACCCAGTCCTaGGAATCCAGTGGGGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: HPGLEPAICKDHFDLPLLPFTQS*ESSGAV Trigger: CACAGCCCCACTGGATTCTCAGGACTGGGTGAAAGG...GAGGAGCGGGAGGTCAAAGTGGTCCTTACAAATAGCAGGCTCTAGGCCAGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR-3UTR GCA 90 bp | CTCTGGGCAATGCACTTCTCCTTTTGGAGGATGCTCCAGCATCCCACTGTGTGTCACCGTGTGACTCGGTaGCCAGCACAGGAGAGGTAT | + |
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Preference number: 2 (lower is better) Translates to: LWAMHFSFWRMLQHPTVCHRVTR*PAQERY Trigger: ATACCTCTCCTGTGCTGGGCACCGAGTCACACGGTG...ACACACAGTGGGATGCTGGAGCATCCTCCAAAAGGAGAAGTGCATTGCCCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR-3UTR TCA 90 bp | TCTAGAATGCCTGAGGGACAGAGGGGCTGGGTAGAGAACCATGTACTAAAATACCAGCAGAACACCGTGTaGCTCGGTGCCCAGCACAGG | + |
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Preference number: 2 (lower is better) Translates to: SRMPEGQRGWVENHVLKYQQNTV*LGAQHR Trigger: CCTGTGCTGGGCACCGAGTCACACGGTGTTCTGCTG...GTATTTTAGTACATGGTTCTCTACCCAGCCCCTCTGTCCCTCAGGCATTCTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR CAA 90 bp | GATCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCCGGACCTTCGGGAGAGCAATCGGGTGCTCTTACCCAC | + |
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Preference number: 2 (lower is better) Translates to: DLVTDGCEPPCGCWD*NSGPSGEQSGALTH Trigger: GTGGGTAAGAGCACCCGATTGCTCTCCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR-3UTR CCA 90 bp | CTAGAGCCTGCTATTTGTAAGGACCACTTTGACCTCCCGCTCCTCCTACCCCACGCTAAGGGTCACACATaGACACATTTCTCTGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: LEPAICKDHFDLPLLLPHAKGHT*THFSAG Trigger: CCCTGCAGAGAAATGTGTCCATGTGTGACCCTTAGC...GTGGGGTAGGAGGAGCGGGAGGTCAAAGTGGTCCTTACAAATAGCAGGCTCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR-3UTR CCA 90 bp | CACCCTGGCCTAGAGCCTGCTATTTGTAAGGACCACTTTGACCTCCCGCTCCTCGAATGTCTGAACATTTaGGTGTCCCAGACTCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: HPGLEPAICKDHFDLPLLECLNI*VSQTPL Trigger: CAAGGGAGTCTGGGACACCCAAATGTTCAGACATTC...GAGGAGCGGGAGGTCAAAGTGGTCCTTACAAATAGCAGGCTCTAGGCCAGGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR-3UTR CCA 90 bp | AATTTAGTCCTGTCAGCACAGAGTCTAGAATGCCTGAGGGACAGAGGGGCTGGGTCTCCCCAGCACAGATaGGGCAGAAGTCTGAATGTC | + |
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Preference number: 2 (lower is better) Translates to: NLVLSAQSLECLRDRGAGSPQHR*GRSLNV Trigger: GACATTCAGACTTCTGCCCCATCTGTGCTGGGGAGA...CCCAGCCCCTCTGTCCCTCAGGCATTCTAGACTCTGTGCTGACAGGACTAAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR CAA 90 bp | TTCTCTGCAGTACTCTCCTGCTCTCTGGGCAATGCACTTCTCCTTTaGGAGGATGCTCCAGCATCCCACTGTGTGTGTATATGCTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: FSAVLSCSLGNALLL*EDAPASHCVCICWR Trigger: CCTCCAGCATATACACACACAGTGGGATGCTGGAGCATCCTCCAAAAGGAGAAGTGCATTGCCCAGAGAGCAGGAGAGTACTGCAGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR-3UTR TCA 90 bp | AATCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTCTAGTCCACCTTCTGATGGGGCAGAAGTCTaGATGTCTGAACATTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: NRVLLPTEPSHQPSSPPSDGAEV*MSEHLG Trigger: ACCCAAATGTTCAGACATTCAGACTTCTGCCCCATC...AGAAGGTGGACTAGAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR-3UTR GCA 90 bp | CACCCTGGCCTAGAGCCTGCTATTTGTAAGGACCACTTTGACCTCCCGCTCCTCCACTGTGTGTGTATATaGTGGAGGAACTATGTAGCC | + |
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Preference number: 2 (lower is better) Translates to: HPGLEPAICKDHFDLPLLHCVCI*WRNYVA Trigger: GGCTACATAGTTCCTCCAGCATATACACACACAGTG...GAGGAGCGGGAGGTCAAAGTGGTCCTTACAAATAGCAGGCTCTAGGCCAGGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR-3UTR GCA 90 bp | GCACAGATGGGGCAGAAGTCTGAATGTCTGAACATTTGGGTGTCCCAGACTCCCTCTCCTTTTGGAGGATaGTCCAGCATCCCACTGTGT | + |
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Preference number: 2 (lower is better) Translates to: AQMGQKSECLNIWVSQTPSPFGG*SSIPLC Trigger: ACACAGTGGGATGCTGGAGCATCCTCCAAAAGGAGA...GGGAGTCTGGGACACCCAAATGTTCAGACATTCAGACTTCTGCCCCATCTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR-3UTR GCA 90 bp | GTGCTCTTACCCACTGAGCCATCTCACCAGCCCTCTAGTCCACCTTCTAATAGTTGTCCCAGACTCCCTTaGAGCAGTGTTCTGCTAAGG | + |
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Preference number: 2 (lower is better) Translates to: VLLPTEPSHQPSSPPSNSCPRLP*SSVLLR Trigger: CCTTAGCAGAACACTGCTGCAAGGGAGTCTGGGACA...ACTATTAGAAGGTGGACTAGAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR-3UTR TCA 90 bp | CTGAGAGTTCTCGGGAGACAGAAGATTGCTGAGTGGCACCAACGTAGACAGCAGCTAAGTTTTCTTCTCTaGAGCCCCTACAGTTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: LRVLGRQKIAEWHQRRQQLSFLL*SPYSWV Trigger: AACCCAACTGTAGGGGCTTCAGAGAAGAAAACTTAG...CTGCTGTCTACGTTGGTGCCACTCAGCAATCTTCTGTCTCCCGAGAACTCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR-3UTR GCA 90 bp | TTTCTCTGCAGGGCAACAACAGACAGCCTGAGTATGGGAACAGCTAGAAGGAACAGGGAAATTGGGGCTTaGAGAGCTAGAGCTTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: FLCRATTDSLSMGTARRNREIGA*RARASL Trigger: CAGAGAAGCTCTAGCTCTGCAAGCCCCAATTTCCCT...GTTCCTTCTAGCTGTTCCCATACTCAGGCTGTCTGTTGTTGCCCTGCAGAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR-3UTR CCA 90 bp | CTGAGAGTTCTCGGGAGACAGAAGATTGCTGAGTGGCACCAACGTAGACAGCAGTGTGTGTGTATATGCTaGAGGAACTATGTAGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: LRVLGRQKIAEWHQRRQQCVCIC*RNYVAQ Trigger: CTGGGCTACATAGTTCCTCCAGCATATACACACACA...CTGCTGTCTACGTTGGTGCCACTCAGCAATCTTCTGTCTCCCGAGAACTCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR-3UTR GCA 90 bp | CAGAAGAGGGAGTCAGATCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCATGGACACATTTCTCTaGAGGGCAACAACAGACAGC | + |
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Preference number: 2 (lower is better) Translates to: QKRESDLVTDGCEPPCGCMDTFL*RATTDS Trigger: GCTGTCTGTTGTTGCCCTGCAGAGAAATGTGTCCAT...GCAACCACATGGTGGCTCACAACCATCTGTAACAAGATCTGACTCCCTCTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR-3UTR TCA 90 bp | TGCATTCCACCTGACTACTCCGTTATCTGCACATCTGGGGAAGTGCTAGGTACAAGAAGTCTGAATGTCTaGACATTTGGGTGTCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: CIPPDYSVICTSGEVLGTRSLNV*TFGCPR Trigger: TCTGGGACACCCAAATGTTCAGACATTCAGACTTCT...TGTACCTAGCACTTCCCCAGATGTGCAGATAACGGAGTAGTCAGGTGGAATGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR-3UTR CCA 90 bp | TCTAGAATGCCTGAGGGACAGAGGGGCTGGGTAGAGAACCATGTACTAAAATACAGTGCACAGATCTCATaGAATACTTCTTCTTACCCA | + |
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Preference number: 2 (lower is better) Translates to: SRMPEGQRGWVENHVLKYSAQIS*NTSSYP Trigger: TGGGTAAGAAGAAGTATTCCATGAGATCTGTGCACT...GTATTTTAGTACATGGTTCTCTACCCAGCCCCTCTGTCCCTCAGGCATTCTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR TCA 72 bp | CAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCCGGACCTTCGGGAGAGCAATCGGGTGCTC | + |
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Preference number: 3 (lower is better) Translates to: QMVVSHHVVAGI*TPDLRESNRVL Trigger: GAGCACCCGATTGCTCTCCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR GCA 72 bp | GGATTTGAACTCCGGACCTTCGGGAGAGCAATCGGGTaGTCTTACCCACTGAGCCATCTCACCAGCCCTCTA | + |
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Preference number: 3 (lower is better) Translates to: GFELRTFGRAIG*SYPLSHLTSPL Trigger: TAGAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGATTGCTCTCCCGAAGGTCCGGAGTTCAAATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR TCA 72 bp | TCTCCCCAGCACAGATGGGGCAGAAGTCTGAATGTCTaGACATTTGGGTGTCCCAGACTCCCTTGCAGCAGT | + |
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Preference number: 3 (lower is better) Translates to: SPQHRWGRSLNV*TFGCPRLPCSS Trigger: ACTGCTGCAAGGGAGTCTGGGACACCCAAATGTTCAGACATTCAGACTTCTGCCCCATCTGTGCTGGGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR GCA 72 bp | GAGCTTCTCTGCAGTACTCTCCTGCTCTCTGGGCAATaGACTTCTCCTTTTGGAGGATGCTCCAGCATCCCA | + |
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Preference number: 3 (lower is better) Translates to: ELLCSTLLLSGQ*TSPFGGCSSIP Trigger: TGGGATGCTGGAGCATCCTCCAAAAGGAGAAGTGCATTGCCCAGAGAGCAGGAGAGTACTGCAGAGAAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR CCA 72 bp | TGTGTGTATATGCTGGAGGAACTATGTAGCCCAGGTTaGCTTCAATCCTGTGACCCCACTTCCCACTCCCCC | + |
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Preference number: 3 (lower is better) Translates to: CVYMLEELCSPG*LQSCDPTSHSP Trigger: GGGGGAGTGGGAAGTGGGGTCACAGGATTGAAGCCAACCTGGGCTACATAGTTCCTCCAGCATATACACACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR GCA 72 bp | ACAGGGAAATTGGGGCTTGCAGAGCTAGAGCTTCTCTaGAGTACTCTCCTGCTCTCTGGGCAATGCACTTCT | + |
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Preference number: 3 (lower is better) Translates to: TGKLGLAELELL*STLLLSGQCTS Trigger: AGAAGTGCATTGCCCAGAGAGCAGGAGAGTACTGCAGAGAAGCTCTAGCTCTGCAAGCCCCAATTTCCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR CCA 72 bp | CTGTGTTCAGCTGACAGACTCTTCAAGGCTACCAGTTaGGCTCCGATGCAGACTACCAATGCTCCAGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: LCSADRLFKATS*APMQTTNAPAE Trigger: TTCTGCTGGAGCATTGGTAGTCTGCATCGGAGCCCAACTGGTAGCCTTGAAGAGTCTGTCAGCTGAACACAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR CCA 72 bp | AAAGAGCACCCCTTTCACCCAGTCCTGAGAATCCAGTaGGGCTGTGTTCAGCTGACAGACTCTTCAAGGCTA | + |
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Preference number: 3 (lower is better) Translates to: KEHPFHPVLRIQ*GCVQLTDSSRL Trigger: TAGCCTTGAAGAGTCTGTCAGCTGAACACAGCCCCACTGGATTCTCAGGACTGGGTGAAAGGGGTGCTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR CCA 72 bp | ACTCCCTTGCAGCAGTGTTCTGCTAAGGGTCACACATaGACACATTTCTCTGCAGGGCAACAACAGACAGCC | + |
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Preference number: 3 (lower is better) Translates to: TPLQQCSAKGHT*THFSAGQQQTA Trigger: GGCTGTCTGTTGTTGCCCTGCAGAGAAATGTGTCCATGTGTGACCCTTAGCAGAACACTGCTGCAAGGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR CCA 72 bp | GCACAGATGGGGCAGAAGTCTGAATGTCTGAACATTTaGGTGTCCCAGACTCCCTTGCAGCAGTGTTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: AQMGQKSECLNI*VSQTPLQQCSA Trigger: AGCAGAACACTGCTGCAAGGGAGTCTGGGACACCCAAATGTTCAGACATTCAGACTTCTGCCCCATCTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR CCA 72 bp | CTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCCGGACCTTCGGGAGAGCAATCG | + |
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Preference number: 3 (lower is better) Translates to: LVTDGCEPPCGC*DLNSGPSGEQS Trigger: CGATTGCTCTCCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR-3UTR CAA 90 bp | AGAGGGAGTCAGATCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGGCCCCTACAGTTGGGTaGACTCTCCTGATTGACCAA | + |
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Preference number: 3 (lower is better) Translates to: RGSQILLQMVVSHHVVAGAPTVG*TLLIDQ Trigger: TTGGTCAATCAGGAGAGTCAACCCAACTGTAGGGGC...CCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAGATCTGACTCCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR-3UTR CAA 90 bp | AATTTAGTCCTGTCAGCACAGAGTCTAGAATGCCTGAGGGACAGAGGGGCTGGGAATGCACTTCTCCTTTaGGAGGATGCTCCAGCATCC | + |
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Preference number: 3 (lower is better) Translates to: NLVLSAQSLECLRDRGAGNALLL*EDAPAS Trigger: GGATGCTGGAGCATCCTCCAAAAGGAGAAGTGCATT...CCCAGCCCCTCTGTCCCTCAGGCATTCTAGACTCTGTGCTGACAGGACTAAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR GCA 72 bp | GATCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCCGGACCTTCGGGAGAGCAA | + |
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Preference number: 3 (lower is better) Translates to: DLVTDGCEPPCG*WDLNSGPSGEQ Trigger: TTGCTCTCCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR GCA 72 bp | TTGGAGGATGCTCCAGCATCCCACTGTGTGTGTATATaGTGGAGGAACTATGTAGCCCAGGTTGGCTTCAAT | + |
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Preference number: 3 (lower is better) Translates to: LEDAPASHCVCI*WRNYVAQVGFN Trigger: ATTGAAGCCAACCTGGGCTACATAGTTCCTCCAGCATATACACACACAGTGGGATGCTGGAGCATCCTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR CCA 72 bp | TACTCTCCTGCTCTCTGGGCAATGCACTTCTCCTTTTaGAGGATGCTCCAGCATCCCACTGTGTGTGTATAT | + |
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Preference number: 3 (lower is better) Translates to: YSPALWAMHFSF*RMLQHPTVCVY Trigger: ATATACACACACAGTGGGATGCTGGAGCATCCTCCAAAAGGAGAAGTGCATTGCCCAGAGAGCAGGAGAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR TCA 72 bp | TGGACACATTTCTCTGCAGGGCAACAACAGACAGCCTaGGTATGGGAACAGCTAGAAGGAACACAGGGAAAT | + |
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Preference number: 3 (lower is better) Translates to: WTHFSAGQQQTA*VWEQLEGTQGN Trigger: ATTTCCCTGTGTTCCTTCTAGCTGTTCCCATACTCAGGCTGTCTGTTGTTGCCCTGCAGAGAAATGTGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR CCA 72 bp | CACTCCCCCACCTATCTCCATAGTGCACAGATCTCATaGAATACTTCTTCTTACCCAAACCCTAAGTTTTCT | + |
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Preference number: 3 (lower is better) Translates to: HSPTYLHSAQIS*NTSSYPNPKFS Trigger: AGAAAACTTAGGGTTTGGGTAAGAAGAAGTATTCCATGAGATCTGTGCACTATGGAGATAGGTGGGGGAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR TCA 90 bp | CACCCTGGCCTAGAGCCTGCTATTTGTAAGGACCACTTTGACCTCCCGCTCCTCGAACTTGAGGGCGACTaGGAGGCTGCTTCGGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: HPGLEPAICKDHFDLPLLELEGD*EAASGH Trigger: GTGGCCCGAAGCAGCCTCTCAGTCGCCCTCAAGTTC...GAGGAGCGGGAGGTCAAAGTGGTCCTTACAAATAGCAGGCTCTAGGCCAGGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CCA 90 bp | CACCCTGGCCTAGAGCCTGCTATTTGTAAGGACCACTTTGACCTCCCGCTCCTCGGCTTCTGCCTCTGCTaGCCTGTGGTCCACGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: HPGLEPAICKDHFDLPLLGFCLC*PVVHVL Trigger: GAGGACGTGGACCACAGGCCAGCAGAGGCAGAAGCC...GAGGAGCGGGAGGTCAAAGTGGTCCTTACAAATAGCAGGCTCTAGGCCAGGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CCA 90 bp | TGGGTGTCCCAGACTCCCTTGCAGCAGTGTTCTGCTAAGGGTCACACATGGACATCCTGGGCTGGTGTCTaGGACGCCCTCCTCCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: WVSQTPLQQCSAKGHTWTSWAGV*DALLLF Trigger: GAAGAGGAGGAGGGCGTCCCAGACACCAGCCCAGGA...TGTCCATGTGTGACCCTTAGCAGAACACTGCTGCAAGGGAGTCTGGGACACCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR GCA 90 bp | TGCATTCCACCTGACTACTCCGTTATCTGCACATCTGGGGAAGTGCTAGGTACAGGGCGACTGAGAGGCTaGTTCGGGCCACCATGGCCC | + |
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Preference number: 4 (lower is better) Translates to: CIPPDYSVICTSGEVLGTGRLRG*FGPPWP Trigger: GGGCCATGGTGGCCCGAAGCAGCCTCTCAGTCGCCC...TGTACCTAGCACTTCCCCAGATGTGCAGATAACGGAGTAGTCAGGTGGAATGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR TCA 90 bp | TGGGTGTCCCAGACTCCCTTGCAGCAGTGTTCTGCTAAGGGTCACACATGGACAAGCACCACTGCCTTCTaGGGAGTCCACCAGGGCATT | + |
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Preference number: 4 (lower is better) Translates to: WVSQTPLQQCSAKGHTWTSTTAF*GVHQGI Trigger: AATGCCCTGGTGGACTCCTCAGAAGGCAGTGGTGCT...TGTCCATGTGTGACCCTTAGCAGAACACTGCTGCAAGGGAGTCTGGGACACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CCA 90 bp | AATTTAGTCCTGTCAGCACAGAGTCTAGAATGCCTGAGGGACAGAGGGGCTGGGTCCTGGGCTGGTGTCTaGGGTTCCCTCCTCCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: NLVLSAQSLECLRDRGAGSWAGV*GSLLLF Trigger: GAAGAGGAGGAGGGAACCCCAGACACCAGCCCAGGA...CCCAGCCCCTCTGTCCCTCAGGCATTCTAGACTCTGTGCTGACAGGACTAAATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR TCA 90 bp | GAGGAACTATGTAGCCCAGGTTGGCTTCAATCCTGTGACCCCACTTCCCACTCCCCCAACACAGATACCTaGGGCTGCTTGCTCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EELCSPGWLQSCDPTSHSPNTDT*GCLLSK Trigger: CTTGGAGAGCAAGCAGCCTCAGGTATCTGTGTTGGG...GGAGTGGGAAGTGGGGTCACAGGATTGAAGCCAACCTGGGCTACATAGTTCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR TCA 90 bp | AATCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTCTAGTCCACCTTCTAGAAGACAAGGGCTCTaGTGGGGGCAGGGAGATACT | + |
|
Preference number: 4 (lower is better) Translates to: NRVLLPTEPSHQPSSPPSRRQGL*WGQGDT Trigger: AGTATCTCCCTGCCCCCATCAGAGCCCTTGTCTTCT...AGAAGGTGGACTAGAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR GCA 90 bp | TTTCTCTGCAGGGCAACAACAGACAGCCTGAGTATGGGAACAGCTAGAAGGAACCTGGGCTTCTGCCTCTaGTGGCCTGTGGTCCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: FLCRATTDSLSMGTARRNLGFCL*WPVVHV Trigger: GACGTGGACCACAGGCCAGCAGAGGCAGAAGCCCAG...GTTCCTTCTAGCTGTTCCCATACTCAGGCTGTCTGTTGTTGCCCTGCAGAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CCA 90 bp | CACCCTGGCCTAGAGCCTGCTATTTGTAAGGACCACTTTGACCTCCCGCTCCTCCTCTCCAAACTCTCTTaGGTTGGTGTCTGGGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HPGLEPAICKDHFDLPLLLSKLS*VGVWGS Trigger: GGAACCCCAGACACCAACCCAAGAGAGTTTGGAGAG...GAGGAGCGGGAGGTCAAAGTGGTCCTTACAAATAGCAGGCTCTAGGCCAGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CCA 90 bp | GAGGAACTATGTAGCCCAGGTTGGCTTCAATCCTGTGACCCCACTTCCCACTCCTCCTGGGCTGGTGTCTaGGATTCCCTCCTTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EELCSPGWLQSCDPTSHSSWAGV*DSLLLF Trigger: GAAGAGAAGGAGGGAATCCCAGACACCAGCCCAGGA...GGAGTGGGAAGTGGGGTCACAGGATTGAAGCCAACCTGGGCTACATAGTTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CCA 90 bp | CTCTGGGCAATGCACTTCTCCTTTTGGAGGATGCTCCAGCATCCCACTGTGTGTCGAGTTCTCCTGGGCTaGTGTCTGGGATTCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LWAMHFSFWRMLQHPTVCRVLLG*CLGFPP Trigger: AGGAGGGAATCCCAGACACCAGCCCAGGAGAACTCG...ACACACAGTGGGATGCTGGAGCATCCTCCAAAAGGAGAAGTGCATTGCCCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CCA 90 bp | TGCATTCCACCTGACTACTCCGTTATCTGCACATCTGGGGAAGTGCTAGGTACAGGCGCTGGGCTCCTCTaGGCTCCCTTCATCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CIPPDYSVICTSGEVLGTGAGLL*APFITV Trigger: GACAGTGATGAAGGGAGCCCAGAGGAGCCCAGCGCC...TGTACCTAGCACTTCCCCAGATGTGCAGATAACGGAGTAGTCAGGTGGAATGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCCGGACCTTCGGGAGAGCAATCGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NSGPSGEQSGA Trigger: AGCACCCGATTGCTCTCCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR TCA 90 bp | AATTTAGTCCTGTCAGCACAGAGTCTAGAATGCCTGAGGGACAGAGGGGCTGGGCGTCCTCCACAGCCTTaGTTAGCCTCTGGGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NLVLSAQSLECLRDRGAGRPPQP*LASGFL Trigger: CAGAAACCCAGAGGCTAATCAAGGCTGTGGAGGACG...CCCAGCCCCTCTGTCCCTCAGGCATTCTAGACTCTGTGCTGACAGGACTAAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR GCA 90 bp | GCTAGAAGGAACACAGGGAAATTGGGGCTTGCAGAGCTAGAGCTTCTCTGCAGTCCCTCACAGCACCACTaGCTTCTGAGGAGTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: ARRNTGKLGLAELELLCSPSQHH*LLRSPP Trigger: TGGTGGACTCCTCAGAAGGCAGTGGTGCTGTGAGGG...ACTGCAGAGAAGCTCTAGCTCTGCAAGCCCCAATTTCCCTGTGTTCCTTCTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CCA 90 bp | TTTCTCTGCAGGGCAACAACAGACAGCCTGAGTATGGGAACAGCTAGAAGGAACCTCTCTAAGGTCTCCTaGGCTGGTGTCTGGGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLCRATTDSLSMGTARRNLSKVS*AGVWDA Trigger: GGCGTCCCAGACACCAGCCCAGGAGACCTTAGAGAG...GTTCCTTCTAGCTGTTCCCATACTCAGGCTGTCTGTTGTTGCCCTGCAGAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CCA 90 bp | GTGCTCTTACCCACTGAGCCATCTCACCAGCCCTCTAGTCCACCTTCTAATAGTCTCTCCGAGTTCTCCTaGGCTGGTGTCTGGGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLLPTEPSHQPSSPPSNSLSEFS*AGVWDS Trigger: GGAATCCCAGACACCAGCCCAGGAGAACTCGGAGAG...ACTATTAGAAGGTGGACTAGAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
||
| CDS-3UTR CCA 90 bp | GCTAGAAGGAACACAGGGAAATTGGGGCTTGCAGAGCTAGAGCTTCTCTGCAGTCAAGACTGTCGGGGATaGGCTCCAATTCCTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ARRNTGKLGLAELELLCSQDCRG*APIPGS Trigger: GGAGCCAGGAATTGGAGCCCATCCCCGACAGTCTTG...ACTGCAGAGAAGCTCTAGCTCTGCAAGCCCCAATTTCCCTGTGTTCCTTCTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR GCA 90 bp | GAGGAACTATGTAGCCCAGGTTGGCTTCAATCCTGTGACCCCACTTCCCACTCCCACTTACTTTTGCACTaGATCCAGTTCCGGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EELCSPGWLQSCDPTSHSHLLLH*IQFRVS Trigger: GGAGACCCGGAACTGGATGCAGTGCAAAAGTAAGTG...GGAGTGGGAAGTGGGGTCACAGGATTGAAGCCAACCTGGGCTACATAGTTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR GCA 90 bp | CTAGAGCCTGCTATTTGTAAGGACCACTTTGACCTCCCGCTCCTCCTACCCCACCTGTCCACTTACTTTTaGACTGCATCCAGTTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LEPAICKDHFDLPLLLPHLSTYF*TASSSG Trigger: CCCGGAACTGGATGCAGTGCAAAAGTAAGTGGACAG...GTGGGGTAGGAGGAGCGGGAGGTCAAAGTGGTCCTTACAAATAGCAGGCTCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CCA 90 bp | CAGAAGAGGGAGTCAGATCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCCTCTCTAAGGTCTCCTaGGCTGGTGTCTGGGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QKRESDLVTDGCEPPCGCLSKVS*AGVWGS Trigger: GGAACCCCAGACACCAGCCCAGGAGACCTTAGAGAG...GCAACCACATGGTGGCTCACAACCATCTGTAACAAGATCTGACTCCCTCTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CCA 90 bp | CAGAAGAGGGAGTCAGATCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCCCCCAGCAAGGACACTaGAGGCTGCTCACTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QKRESDLVTDGCEPPCGCPQQGH*RLLTLQ Trigger: TTGGAGAGTGAGCAGCCTCCAGTGTCCTTGCTGGGG...GCAACCACATGGTGGCTCACAACCATCTGTAACAAGATCTGACTCCCTCTTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CCA 90 bp | AATTTAGTCCTGTCAGCACAGAGTCTAGAATGCCTGAGGGACAGAGGGGCTGGGTGCCTGAACAAAAGGTaGAGGGACATCCCCTATGGC | + |
|
Preference number: 4 (lower is better) Translates to: NLVLSAQSLECLRDRGAGCLNKR*RDIPYG Trigger: GCCATAGGGGATGTCCCTCCACCTTTTGTTCAGGCA...CCCAGCCCCTCTGTCCCTCAGGCATTCTAGACTCTGTGCTGACAGGACTAAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR TCA 90 bp | CTAGAGCCTGCTATTTGTAAGGACCACTTTGACCTCCCGCTCCTCCTACCCCACTTCACGCACTTTTGCTaGCCTTTGTCCCTTGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LEPAICKDHFDLPLLLPHFTHFC*PLSLAH Trigger: ATGAGCAAGGGACAAAGGTCAGCAAAAGTGCGTGAA...GTGGGGTAGGAGGAGCGGGAGGTCAAAGTGGTCCTTACAAATAGCAGGCTCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CCA 90 bp | GGAGACAGAAGATTGCTGAGTGGCACCAACGTAGACAGCAGTATATGGGCGGTTTCTTCCTCCTTCTCTTaGCTTTCCGAGGCTGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GDRRLLSGTNVDSSIWAVSSSFS*LSEAAH Trigger: GTGAGCAGCCTCGGAAAGCCAAGAGAAGGAGGAAGA...AACCGCCCATATACTGCTGTCTACGTTGGTGCCACTCAGCAATCTTCTGTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CCA 90 bp | GCTAGAAGGAACACAGGGAAATTGGGGCTTGCAGAGCTAGAGCTTCTCTGCAGTCCGACAGCTCCTCCATaGTGTGTGCTATCAAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ARRNTGKLGLAELELLCSPTAPP*CVLSSL Trigger: GAGACTTGATAGCACACACCATGGAGGAGCTGTCGG...ACTGCAGAGAAGCTCTAGCTCTGCAAGCCCCAATTTCCCTGTGTTCCTTCTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CCA 90 bp | TGTCTGAGAGTTCTCGGGAGACAGAAGATTGCTGAGTGGCACCAACGTAGACAGTGCTTCGGGCCACCATaGCCCCAATCTTTTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CLRVLGRQKIAEWHQRRQCFGPP*PQSFSS Trigger: ACTGGAAAAAGATTGGGGCCATGGTGGCCCGAAGCA...CTGTCTACGTTGGTGCCACTCAGCAATCTTCTGTCTCCCGAGAACTCTCAGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR TCA 90 bp | GGAGACAGAAGATTGCTGAGTGGCACCAACGTAGACAGCAGTATATGGGCGGTTCCTGTATGTCAGGAATaGACTCTCGCAGCTGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GDRRLLSGTNVDSSIWAVPVCQE*TLAAVS Trigger: TGAGACAGCTGCGAGAGTTCATTCCTGACATACAGG...AACCGCCCATATACTGCTGTCTACGTTGGTGCCACTCAGCAATCTTCTGTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR TCA 90 bp | ACTTCCCACTCCCCCACCTATCTCCATAGTGCACAGATCTCATGGAATACTTCTCAATCTGAGAGAACTTaGGGGCGACTGAGAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TSHSPTYLHSAQISWNTSQSERT*GRLRGC Trigger: GCAGCCTCTCAGTCGCCCTCAAGTTCTCTCAGATTG...AGAAGTATTCCATGAGATCTGTGCACTATGGAGATAGGTGGGGGAGTGGGAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR GCA 90 bp | GCTAGAAGGAACACAGGGAAATTGGGGCTTGCAGAGCTAGAGCTTCTCTGCAGTGTAGGTTCTAACCTCTaGATGGCTTCCCTGTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ARRNTGKLGLAELELLCSVGSNL*MASLCF Trigger: GAAGCACAGGGAAGCCATGCAGAGGTTAGAACCTAC...ACTGCAGAGAAGCTCTAGCTCTGCAAGCCCCAATTTCCCTGTGTTCCTTCTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR GCA 90 bp | TTTCTCTGCAGGGCAACAACAGACAGCCTGAGTATGGGAACAGCTAGAAGGAACGTCTTGTTTGGGAGCTaGAGGTGTTTGGATCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLCRATTDSLSMGTARRNVLFGS*RCLDLA Trigger: GGCCAGATCCAAACACCTGCAGCTCCCAAACAAGAC...GTTCCTTCTAGCTGTTCCCATACTCAGGCTGTCTGTTGTTGCCCTGCAGAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CCA 90 bp | CTCTGGGCAATGCACTTCTCCTTTTGGAGGATGCTCCAGCATCCCACTGTGTGTGCCTTGATTAGCCTCTaGGTTTCTGCCTTACTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LWAMHFSFWRMLQHPTVCALISL*VSALLQ Trigger: TTGGAGTAAGGCAGAAACCCAGAGGCTAATCAAGGC...ACACACAGTGGGATGCTGGAGCATCCTCCAAAAGGAGAAGTGCATTGCCCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CCA 90 bp | CACCCTGGCCTAGAGCCTGCTATTTGTAAGGACCACTTTGACCTCCCGCTCCTCAGTTCTCTTAACTCCTaGGGAGACATCTTCTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: HPGLEPAICKDHFDLPLLSSLNS*GDIFFR Trigger: CCTAAAGAAGATGTCTCCCCAGGAGTTAAGAGAACT...GAGGAGCGGGAGGTCAAAGTGGTCCTTACAAATAGCAGGCTCTAGGCCAGGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR TCA 90 bp | TCACCCAGTCCTGAGAATCCAGTGGGGCTGTGTTCAGCTGACAGACTCTTCAAGTCCGTTTTAGGTTGGTaGTCAGAGTCTTTTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPSPENPVGLCSADRLFKSVLGW*SESFPL Trigger: CAGAGGAAAAGACTCTGATCACCAACCTAAAACGGA...CTTGAAGAGTCTGTCAGCTGAACACAGCCCCACTGGATTCTCAGGACTGGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR GCA 90 bp | AGAGGGAGTCAGATCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAACAACATCCCAGGGTaGAACTTTCTGGAGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RGSQILLQMVVSHHVVAGNNIPG*NFLEVL Trigger: AAGCACCTCCAGAAAGTTGCACCCTGGGATGTTGTT...CCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAGATCTGACTCCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR GCA 90 bp | AATTTAGTCCTGTCAGCACAGAGTCTAGAATGCCTGAGGGACAGAGGGGCTGGGTGTGGGATTCTTTGGTaGTCTCACATTCTTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NLVLSAQSLECLRDRGAGCGILW*SHILLQ Trigger: CTGGAGAAGAATGTGAGAGCACCAAAGAATCCCACA...CCCAGCCCCTCTGTCCCTCAGGCATTCTAGACTCTGTGCTGACAGGACTAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR GCA 90 bp | ACTTCCCACTCCCCCACCTATCTCCATAGTGCACAGATCTCATGGAATACTTCTTGCATGGCTTCCCTGTaGTTCTCAGTGGAACAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TSHSPTYLHSAQISWNTSCMASL*FSVEQA Trigger: GGCTTGTTCCACTGAGAAGCACAGGGAAGCCATGCA...AGAAGTATTCCATGAGATCTGTGCACTATGGAGATAGGTGGGGGAGTGGGAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR GCA 90 bp | GTGCTCTTACCCACTGAGCCATCTCACCAGCCCTCTAGTCCACCTTCTAATAGTCCTCCACCCAAGATATaGCCTTGTAGAGTTTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VLLPTEPSHQPSSPPSNSPPPKI*PCRVFP Trigger: GGGAAAAACTCTACAAGGGCATATCTTGGGTGGAGG...ACTATTAGAAGGTGGACTAGAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CCA 90 bp | TGGGTGTCCCAGACTCCCTTGCAGCAGTGTTCTGCTAAGGGTCACACATGGACATTGCTTTCTTCTTCATaGGTAGGTTCTAACCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WVSQTPLQQCSAKGHTWTLLSSS*VGSNLC Trigger: GCAGAGGTTAGAACCTACCCATGAAGAAGAAAGCAA...TGTCCATGTGTGACCCTTAGCAGAACACTGCTGCAAGGGAGTCTGGGACACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CCA 90 bp | TGGGTGTCCCAGACTCCCTTGCAGCAGTGTTCTGCTAAGGGTCACACATGGACATTACTCCAAGCACCTTaGTTTCTAGTACCACCAATC | + |
|
Preference number: 4 (lower is better) Translates to: WVSQTPLQQCSAKGHTWTLLQAP*FLVPPI Trigger: GATTGGTGGTACTAGAAACCAAGGTGCTTGGAGTAA...TGTCCATGTGTGACCCTTAGCAGAACACTGCTGCAAGGGAGTCTGGGACACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR CAA 72 bp | CTGAGTATGGGAACAGCTAGAAGGAACACAGGGAAATaGGGGCTTGCAGAGCTAGAGCTTCTCTGCAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: LSMGTARRNTGK*GLAELELLCST Trigger: AGTACTGCAGAGAAGCTCTAGCTCTGCAAGCCCCAATTTCCCTGTGTTCCTTCTAGCTGTTCCCATACTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| 3UTR CAA 72 bp | TCTGAATGTCTGAACATTTGGGTGTCCCAGACTCCCTaGCAGCAGTGTTCTGCTAAGGGTCACACATGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SECLNIWVSQTP*QQCSAKGHTWT Trigger: TGTCCATGTGTGACCCTTAGCAGAACACTGCTGCAAGGGAGTCTGGGACACCCAAATGTTCAGACATTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR TCA 90 bp | CACATGAATGCTGGGTGCATTAGTGCATTCCACCTGACTACTCCGTTATCTGCATTCCTCTTGGCCTTTTaGGGCCACTCACTCTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: HMNAGCISAFHLTTPLSAFLLAF*GHSLSK Trigger: CTTAGAGAGTGAGTGGCCTCAAAAGGCCAAGAGGAA...TGCAGATAACGGAGTAGTCAGGTGGAATGCACTAATGCACCCAGCATTCATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR TCA 90 bp | GCACAGATGGGGCAGAAGTCTGAATGTCTGAACATTTGGGTGTCCCAGACTCCCTGCAGAATTGCTAGCTaGTTCCGAATTGCTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AQMGQKSECLNIWVSQTPCRIAS*FRIAFF Trigger: GAAGAAAGCAATTCGGAATCAGCTAGCAATTCTGCA...GGGAGTCTGGGACACCCAAATGTTCAGACATTCAGACTTCTGCCCCATCTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
||
| CDS-3UTR GCA 90 bp | CACATGAATGCTGGGTGCATTAGTGCATTCCACCTGACTACTCCGTTATCTGCAATGCCCTTCCCAATGTaGAGTCTGAAGGCATGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HMNAGCISAFHLTTPLSAMPFPM*SLKACF Trigger: GAAGCATGCCTTCAGACTGCACATTGGGAAGGGCAT...TGCAGATAACGGAGTAGTCAGGTGGAATGCACTAATGCACCCAGCATTCATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
||
| CDS-3UTR GCA 90 bp | TCACCCAGTCCTGAGAATCCAGTGGGGCTGTGTTCAGCTGACAGACTCTTCAAGATGGAGGGAATGGTATaGCTTCAGCTTCTTAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: SPSPENPVGLCSADRLFKMEGMV*LQLLSI Trigger: GATACTAAGAAGCTGAAGGCATACCATTCCCTCCAT...CTTGAAGAGTCTGTCAGCTGAACACAGCCCCACTGGATTCTCAGGACTGGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
||
| CDS-3UTR CCA 90 bp | GCACAGATGGGGCAGAAGTCTGAATGTCTGAACATTTGGGTGTCCCAGACTCCCTACTGTGGGATTCTTTaGTGCTCTCACATTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AQMGQKSECLNIWVSQTPYCGIL*CSHILL Trigger: GAGAAGAATGTGAGAGCACCAAAGAATCCCACAGTA...GGGAGTCTGGGACACCCAAATGTTCAGACATTCAGACTTCTGCCCCATCTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
||
| CDS-3UTR CCA 90 bp | TCTAGAATGCCTGAGGGACAGAGGGGCTGGGTAGAGAACCATGTACTAAAATACGTTCTAACCTCTGCATaGCTTCCCTGTGCTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRMPEGQRGWVENHVLKYVLTSA*LPCASQ Trigger: CTGAGAAGCACAGGGAAGCCATGCAGAGGTTAGAAC...GTATTTTAGTACATGGTTCTCTACCCAGCCCCTCTGTCCCTCAGGCATTCTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
||
| CDS-3UTR CCA 90 bp | TGTCTGAGAGTTCTCGGGAGACAGAAGATTGCTGAGTGGCACCAACGTAGACAGCAGAGTCTTTTCCTCTaGGTATCTGTCTGTGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: CLRVLGRQKIAEWHQRRQQSLFL*VSVCVQ Trigger: CTGTACACAGACAGATACCCAGAGGAAAAGACTCTG...CTGTCTACGTTGGTGCCACTCAGCAATCTTCTGTCTCCCGAGAACTCTCAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
||
| CDS-3UTR GCA 90 bp | CTGAGAGTTCTCGGGAGACAGAAGATTGCTGAGTGGCACCAACGTAGACAGCAGACACTGCTGCTTCTGTaGTTTTGCCTTCTAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRVLGRQKIAEWHQRRQQTLLLL*FCLLNL Trigger: AAGATTTAGAAGGCAAAAGCACAGAAGCAGCAGTGT...CTGCTGTCTACGTTGGTGCCACTCAGCAATCTTCTGTCTCCCGAGAACTCTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
||
| CDS-3UTR GCA 90 bp | TCTAGAATGCCTGAGGGACAGAGGGGCTGGGTAGAGAACCATGTACTAAAATACGTACAGCAGCTTGTCTaGACTCTCAATTCCAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRMPEGQRGWVENHVLKYVQQLV*TLNSSQ Trigger: CTGACTGGAATTGAGAGTGCAGACAAGCTGCTGTAC...GTATTTTAGTACATGGTTCTCTACCCAGCCCCTCTGTCCCTCAGGCATTCTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CCA 90 bp | TGTCTGAGAGTTCTCGGGAGACAGAAGATTGCTGAGTGGCACCAACGTAGACAGCAGGGTGCAACTTTCTaGAGGTGCTTTTGTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CLRVLGRQKIAEWHQRRQQGATF*RCFCFF Trigger: AAAGAAACAAAAGCACCTCCAGAAAGTTGCACCCTG...CTGTCTACGTTGGTGCCACTCAGCAATCTTCTGTCTCCCGAGAACTCTCAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CCA 90 bp | CACATGAATGCTGGGTGCATTAGTGCATTCCACCTGACTACTCCGTTATCTGCACCCTCAGGGTCTTCCTaGAGTTTAGAATCCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HMNAGCISAFHLTTPLSAPSGSS*SLESSS Trigger: AGAACTGGATTCTAAACTCCAGGAAGACCCTGAGGG...TGCAGATAACGGAGTAGTCAGGTGGAATGCACTAATGCACCCAGCATTCATGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CCA 90 bp | CACCCTGGCCTAGAGCCTGCTATTTGTAAGGACCACTTTGACCTCCCGCTCCTCGTAGTCAATGATTTCTaGAAAAGTCTTTTTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HPGLEPAICKDHFDLPLLVVNDF*KSLFLP Trigger: TGGCAGAAAAAGACTTTTCCAGAAATCATTGACTAC...GAGGAGCGGGAGGTCAAAGTGGTCCTTACAAATAGCAGGCTCTAGGCCAGGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CCA 90 bp | CTCTGGGCAATGCACTTCTCCTTTTGGAGGATGCTCCAGCATCCCACTGTGTGTCTGTCATCATCGCAATaGAAGATGTCTTTGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LWAMHFSFWRMLQHPTVCLSSSQ*KMSLNR Trigger: TCTGTTCAAAGACATCTTCCATTGCGATGATGACAG...ACACACAGTGGGATGCTGGAGCATCCTCCAAAAGGAGAAGTGCATTGCCCAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CCA 90 bp | TCACCCAGTCCTGAGAATCCAGTGGGGCTGTGTTCAGCTGACAGACTCTTCAAGTTTAAGAAAGGTTTCTaGAGTTTTCAGAAGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPSPENPVGLCSADRLFKFKKGF*SFQKGG Trigger: TCCTCCCTTCTGAAAACTCCAGAAACCTTTCTTAAA...CTTGAAGAGTCTGTCAGCTGAACACAGCCCCACTGGATTCTCAGGACTGGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR GCA 90 bp | TTTCTCTGCAGGGCAACAACAGACAGCCTGAGTATGGGAACAGCTAGAAGGAACAATAGCCACACCTTGTaGCTTAAATTCTTTGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: FLCRATTDSLSMGTARRNNSHTL*LKFFEA Trigger: CGCTTCAAAGAATTTAAGGCACAAGGTGTGGCTATT...GTTCCTTCTAGCTGTTCCCATACTCAGGCTGTCTGTTGTTGCCCTGCAGAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CCA 90 bp | TCACCCAGTCCTGAGAATCCAGTGGGGCTGTGTTCAGCTGACAGACTCTTCAAGTACAAAGTTTCAGTGTaGGTCTTAAATTTGCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPSPENPVGLCSADRLFKYKVSV*VLNLLV Trigger: CACAAGCAAATTTAAGACCCACACTGAAACTTTGTA...CTTGAAGAGTCTGTCAGCTGAACACAGCCCCACTGGATTCTCAGGACTGGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR GCA 90 bp | ACTTCCCACTCCCCCACCTATCTCCATAGTGCACAGATCTCATGGAATACTTCTCTGCTTCTGTGCTTTTaGCTTCTAAATCTTCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSHSPTYLHSAQISWNTSLLLCF*LLNLQK Trigger: CTTCTGAAGATTTAGAAGGCAAAAGCACAGAAGCAG...AGAAGTATTCCATGAGATCTGTGCACTATGGAGATAGGTGGGGGAGTGGGAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR GCA 90 bp | CAGAAGAGGGAGTCAGATCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCAGAGCAACAGACTTGTaGTTCTTTTTCTTGGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: QKRESDLVTDGCEPPCGCRATDL*FFFLDF Trigger: AAAGTCCAAGAAAAAGAAGCACAAGTCTGTTGCTCT...GCAACCACATGGTGGCTCACAACCATCTGTAACAAGATCTGACTCCCTCTTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CCA 90 bp | TGTCTGAGAGTTCTCGGGAGACAGAAGATTGCTGAGTGGCACCAACGTAGACAGTTCTTTTTCTTCTTGTaGGCAGAAGTGGTTTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: CLRVLGRQKIAEWHQRRQFFFFL*AEVVFL Trigger: TAAGAAAACCACTTCTGCCCACAAGAAGAAAAAGAA...CTGTCTACGTTGGTGCCACTCAGCAATCTTCTGTCTCCCGAGAACTCTCAGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS GCA 90 bp | GGCTTCCCTGTGCTTCTCAGTGGAACAAGCCTGGGCTTCTGCCTCTaGTGGCCTGTGGTCCACGTCCTCTTCCCTCACAGCACCACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GFPVLLSGTSLGFCL*WPVVHVLFPHSTTA Trigger: GGCAGTGGTGCTGTGAGGGAAGAGGACGTGGACCACAGGCCAGCAGAGGCAGAAGCCCAGGCTTGTTCCACTGAGAAGCACAGGGAAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS GCA 90 bp | CTGCATGGCTTCCCTGTGCTTCTCAGTGGAACAAGCCTGGGCTTCTaGCTCTGCTGGCCTGTGGTCCACGTCCTCTTCCCTCACAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: LHGFPVLLSGTSLGF*LCWPVVHVLFPHST Trigger: GGTGCTGTGAGGGAAGAGGACGTGGACCACAGGCCAGCAGAGGCAGAAGCCCAGGCTTGTTCCACTGAGAAGCACAGGGAAGCCATGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CCA 90 bp | TCTCCTGGGCTGGTGTCTGGGGTTCCCTCCTCCTCTTCTTCCTCTTaGCCTTTTGAGGCCACTCACTCTCTAAGGTCTCCTGGGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SPGLVSGVPSSSSSS*PFEATHSLRSPGLV Trigger: CACCAGCCCAGGAGACCTTAGAGAGTGAGTGGCCTCAAAAGGCCAAGAGGAAGAAGAGGAGGAGGGAACCCCAGACACCAGCCCAGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CCA 90 bp | CTCCTTCTCTTGGCTTTCCGAGGCTGCTCACTCTCCGAGTTCTCCTaGGCTGGTGTCTGGGATTCCCTCCTTCTCTTCCCCAGCAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LLLLAFRGCSLSEFS*AGVWDSLLLFPSKD Trigger: GTCCTTGCTGGGGAAGAGAAGGAGGGAATCCCAGACACCAGCCCAGGAGAACTCGGAGAGTGAGCAGCCTCGGAAAGCCAAGAGAAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CAA 90 bp | CACCCTGGCCTAGAGCCTGCTATTTGTAAGGACCACTTTGACCTCCCGCTCCTCACGTCCTCCACAGCCTaGATTAGCCTCTGGGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HPGLEPAICKDHFDLPLLTSSTA*ISLWVS Trigger: AGAAACCCAGAGGCTAATCAAGGCTGTGGAGGACGT...GAGGAGCGGGAGGTCAAAGTGGTCCTTACAAATAGCAGGCTCTAGGCCAGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS TCA 90 bp | ACCTTGGTTTCTAGTACCACCAATCTGAGAGAACTTGAGGGCGACTaGGAGGCTGCTTCGGGCCACCATGGCCCCAATCTTTTTCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TLVSSTTNLRELEGD*EAASGHHGPNLFPV Trigger: GACTGGAAAAAGATTGGGGCCATGGTGGCCCGAAGCAGCCTCTCAGTCGCCCTCAAGTTCTCTCAGATTGGTGGTACTAGAAACCAAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS TCA 90 bp | GTTTCTGCCTTACTCCAAGCACCTTGGTTTCTAGTACCACCAATCTaGGAGAACTTGAGGGCGACTGAGAGGCTGCTTCGGGCCACCATG | + |
|
Preference number: 5 (lower is better) Translates to: VSALLQAPWFLVPPI*ENLRATERLLRATM Trigger: CATGGTGGCCCGAAGCAGCCTCTCAGTCGCCCTCAAGTTCTCTCAGATTGGTGGTACTAGAAACCAAGGTGCTTGGAGTAAGGCAGAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS GCA 90 bp | CAGGGAGATACTCTCAGGCTGGCTCCCCTGAACAACATCCCAGGGTaGAACTTTCTGGAGGTGCTTTTGTTTCTTTCTGCTCCTGACGTC | + |
|
Preference number: 5 (lower is better) Translates to: QGDTLRLAPLNNIPG*NFLEVLLFLSAPDV Trigger: GACGTCAGGAGCAGAAAGAAACAAAAGCACCTCCAGAAAGTTGCACCCTGGGATGTTGTTCAGGGGAGCCAGCCTGAGAGTATCTCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CAA 90 bp | CTGAGAGTTCTCGGGAGACAGAAGATTGCTGAGTGGCACCAACGTAGACAGCAGTTCTTCCTCCTTCTCTaGGCTTTCCGAGGCTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LRVLGRQKIAEWHQRRQQFFLLL*AFRGCS Trigger: TGAGCAGCCTCGGAAAGCCAAGAGAAGGAGGAAGAA...CTGCTGTCTACGTTGGTGCCACTCAGCAATCTTCTGTCTCCCGAGAACTCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS GCA 90 bp | CGCCCTTTCCTGTATGTCAGGAATGAACTCTCGCAGCTGTCTCACTaGAGAGCCCAAATCAACATCCGAGTCATCAGACTCTCTCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RPFLYVRNELSQLSH*RAQINIRVIRLSPV Trigger: GACAGGAGAGAGTCTGATGACTCGGATGTTGATTTGGGCTCTGCAGTGAGACAGCTGCGAGAGTTCATTCCTGACATACAGGAAAGGGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS GCA 90 bp | TTCCAGGGCCGAGCGATGCCCTTCCCAATGTGCAGTCTGAAGGCATaGTTCCGTTTTAGGTTGGTGATCAGAGTCTTTTCCTCTGGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: FQGRAMPFPMCSLKA*FRFRLVIRVFSSGY Trigger: ATACCCAGAGGAAAAGACTCTGATCACCAACCTAAAACGGAAGCATGCCTTCAGACTGCACATTGGGAAGGGCATCGCTCGGCCCTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CCA 90 bp | TCTTTGGTGCTCTCACATTCTTCTCCAGCCCCGACAGCTCCTCCATaGTGTGTGCTATCAAGTCTCTCAGAGATGGTCTCCGAGTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SLVLSHSSPAPTAPP*CVLSSLSEMVSESS Trigger: TGATGACTCGGAGACCATCTCTGAGAGACTTGATAGCACACACCATGGAGGAGCTGTCGGGGCTGGAGAAGAATGTGAGAGCACCAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CCA 90 bp | GCGCTGGGCTCCTCTGGGCTCCCTTCATCACTGTCATCATCGCAATaGAAGATGTCTTTGAACAGAAAGTCTTGTTTGGGAGCTGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: ALGSSGLPSSLSSSQ*KMSLNRKSCLGAAG Trigger: ACCTGCAGCTCCCAAACAAGACTTTCTGTTCAAAGACATCTTCCATTGCGATGATGACAGTGATGAAGGGAGCCCAGAGGAGCCCAGCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS TCA 90 bp | CACCTCCACCCAAGATATGCCCTTGTAGAGTTTTTCCCGGACAATTaGCAGGCGACCCTCAGGGTCTTCCTGGAGTTTAGAATCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: HLHPRYALVEFFPDN*QATLRVFLEFRIQF Trigger: GAACTGGATTCTAAACTCCAGGAAGACCCTGAGGGTCGCCTGTCAATTGTCCGGGAAAAACTCTACAAGGGCATATCTTGGGTGGAGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CAA 90 bp | CACATGAATGCTGGGTGCATTAGTGCATTCCACCTGACTACTCCGTTATCTGCATCAGAAGGGAGGAAGTaGGTTGCTGGGACCCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: HMNAGCISAFHLTTPLSASEGRK*VAGTLS Trigger: GGAAAGGGTCCCAGCAACCAACTTCCTCCCTTCTGA...TGCAGATAACGGAGTAGTCAGGTGGAATGCACTAATGCACCCAGCATTCATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CAA 90 bp | AATTTAGTCCTGTCAGCACAGAGTCTAGAATGCCTGAGGGACAGAGGGGCTGGGCCATGGGTCATCCTTTaGGTAAGAATCTCTGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: NLVLSAQSLECLRDRGAGPWVIL*VRISVH Trigger: GTGGACAGAGATTCTTACCAAAAGGATGACCCATGG...CCCAGCCCCTCTGTCCCTCAGGCATTCTAGACTCTGTGCTGACAGGACTAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS GCA 90 bp | TGGGTCATCCTTTTGGTAAGAATCTCTGTCCACTTACTTTTGCACTaGATCCAGTTCCGGGTCTCCACTCTAGCTTCCACCTCCACCCAA | + |
|
Preference number: 5 (lower is better) Translates to: WVILLVRISVHLLLH*IQFRVSTLASTSTQ Trigger: TTGGGTGGAGGTGGAAGCTAGAGTGGAGACCCGGAACTGGATGCAGTGCAAAAGTAAGTGGACAGAGATTCTTACCAAAAGGATGACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CAA 90 bp | GAGGAACTATGTAGCCCAGGTTGGCTTCAATCCTGTGACCCCACTTCCCACTCCCTAGCTGATTCCGAATaGCTTTCTTCTTCATGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: EELCSPGWLQSCDPTSHSLADSE*LSSSWV Trigger: TACCCATGAAGAAGAAAGCAATTCGGAATCAGCTAG...GGAGTGGGAAGTGGGGTCACAGGATTGAAGCCAACCTGGGCTACATAGTTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CAA 90 bp | TGTCTGAGAGTTCTCGGGAGACAGAAGATTGCTGAGTGGCACCAACGTAGACAGTCTGTGTACAGCAGCTaGTCTGCACTCTCAATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CLRVLGRQKIAEWHQRRQSVYSS*SALSIP Trigger: TGGAATTGAGAGTGCAGACAAGCTGCTGTACACAGA...CTGTCTACGTTGGTGCCACTCAGCAATCTTCTGTCTCCCGAGAACTCTCAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS GCA 90 bp | TTCATTGTACCTGCCTTTGTAGTTATTCACATCAAAGATCTTCTTTaGACGGTAGTACACGAGCTTCCAGGGCCGAGCGATGCCCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: FIVPAFVVIHIKDLL*TVVHELPGPSDALP Trigger: GGGAAGGGCATCGCTCGGCCCTGGAAGCTCGTGTACTACCGTGCAAAGAAGATCTTTGATGTGAATAACTACAAAGGCAGGTACAATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CCA 90 bp | CTGCTTCGGGCCACCATGGCCCCAATCTTTTTCCAGTCGTTTCCATaGAGGGAATGGTATGCCTTCAGCTTCTTAGTATCTTCTTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: LLRATMAPIFFQSFP*REWYAFSFLVSSSL Trigger: CAATGAAGAAGATACTAAGAAGCTGAAGGCATACCATTCCCTCCATGGAAACGACTGGAAAAAGATTGGGGCCATGGTGGCCCGAAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CCA 90 bp | GACATCTTCTTTAGGATCACGTCCTCCACAGCCTTGATTAGCCTCTaGGTTTCTGCCTTACTCCAAGCACCTTGGTTTCTAGTACCACCA | + |
|
Preference number: 5 (lower is better) Translates to: DIFFRITSSTALISL*VSALLQAPWFLVPP Trigger: TGGTGGTACTAGAAACCAAGGTGCTTGGAGTAAGGCAGAAACCCAGAGGCTAATCAAGGCTGTGGAGGACGTGATCCTAAAGAAGATGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CCA 90 bp | CCCTCAGGGTCTTCCTGGAGTTTAGAATCCAGTTCTCTTAACTCCTaGGGAGACATCTTCTTTAGGATCACGTCCTCCACAGCCTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: PSGSSWSLESSSLNS*GDIFFRITSSTALI Trigger: AATCAAGGCTGTGGAGGACGTGATCCTAAAGAAGATGTCTCCCCAGGAGTTAAGAGAACTGGATTCTAAACTCCAGGAAGACCCTGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CAA 90 bp | GTGCTCTTACCCACTGAGCCATCTCACCAGCCCTCTAGTCCACCTTCTAATAGTGCAAGAGCAACAGACTaGTGCTTCTTTTTCTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VLLPTEPSHQPSSPPSNSARATD*CFFFLD Trigger: GTCCAAGAAAAAGAAGCACAAGTCTGTTGCTCTTGC...ACTATTAGAAGGTGGACTAGAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CAA 90 bp | ACTTCCCACTCCCCCACCTATCTCCATAGTGCACAGATCTCATGGAATACTTCTTCTGTCCACTTACTTTaGCACTGCATCCAGTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TSHSPTYLHSAQISWNTSSVHLL*HCIQFR Trigger: CCGGAACTGGATGCAGTGCAAAAGTAAGTGGACAGA...AGAAGTATTCCATGAGATCTGTGCACTATGGAGATAGGTGGGGGAGTGGGAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS TCA 90 bp | CTGTGGCTTAGCAGCGGGCAGCTCTCCTGTTTCACGCACTTTTGCTaGCCTTTGTCCCTTGCTCATATCAACATAAACAATATCCACATC | + |
|
Preference number: 5 (lower is better) Translates to: LWLSSGQLSCFTHFC*PLSLAHININNIHI Trigger: GATGTGGATATTGTTTATGTTGATATGAGCAAGGGACAAAGGTCAGCAAAAGTGCGTGAAACAGGAGAGCTGCCCGCTGCTAAGCCACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CAA 90 bp | TGCATTCCACCTGACTACTCCGTTATCTGCACATCTGGGGAAGTGCTAGGTACATTTCTGGAGGTGCTTTaGTTTCTTTCTGCTCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: CIPPDYSVICTSGEVLGTFLEVL*FLSAPD Trigger: GTCAGGAGCAGAAAGAAACAAAAGCACCTCCAGAAA...TGTACCTAGCACTTCCCCAGATGTGCAGATAACGGAGTAGTCAGGTGGAATGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CAA 90 bp | CACATGAATGCTGGGTGCATTAGTGCATTCCACCTGACTACTCCGTTATCTGCACATCAAAGATCTTCTTaGCACGGTAGTACACGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: HMNAGCISAFHLTTPLSAHQRSS*HGSTRA Trigger: AGCTCGTGTACTACCGTGCAAAGAAGATCTTTGATG...TGCAGATAACGGAGTAGTCAGGTGGAATGCACTAATGCACCCAGCATTCATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CAA 90 bp | CTCTGGGCAATGCACTTCTCCTTTTGGAGGATGCTCCAGCATCCCACTGTGTGTTCAGCTTATAAAATTTaGCCTGAACAAAAGGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LWAMHFSFWRMLQHPTVCSAYKI*PEQKVE Trigger: CTCCACCTTTTGTTCAGGCAAAATTTTATAAGCTGA...ACACACAGTGGGATGCTGGAGCATCCTCCAAAAGGAGAAGTGCATTGCCCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CAA 90 bp | ACTTCCCACTCCCCCACCTATCTCCATAGTGCACAGATCTCATGGAATACTTCTTTTGAACAGAAAGTCTaGTTTGGGAGCTGCAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: TSHSPTYLHSAQISWNTSFEQKV*FGSCRC Trigger: ACACCTGCAGCTCCCAAACAAGACTTTCTGTTCAAA...AGAAGTATTCCATGAGATCTGTGCACTATGGAGATAGGTGGGGGAGTGGGAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CAA 90 bp | CACATGAATGCTGGGTGCATTAGTGCATTCCACCTGACTACTCCGTTATCTGCACTATTCTTTTTCTTCTaGTGGGCAGAAGTGGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HMNAGCISAFHLTTPLSALFFFF*WAEVVF Trigger: GAAAACCACTTCTGCCCACAAGAAGAAAAAGAATAG...TGCAGATAACGGAGTAGTCAGGTGGAATGCACTAATGCACCCAGCATTCATGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CAA 90 bp | CAGAAGAGGGAGTCAGATCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTCTAATAGCCACACCTaGTGCCTTAAATTCTTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: QKRESDLVTDGCEPPCGCSNSHT*CLKFFE Trigger: TTCAAAGAATTTAAGGCACAAGGTGTGGCTATTAGA...GCAACCACATGGTGGCTCACAACCATCTGTAACAAGATCTGACTCCCTCTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS-3UTR CAA 90 bp | TCTAGAATGCCTGAGGGACAGAGGGGCTGGGTAGAGAACCATGTACTAAAATACCAATGGAAGATGTCTTaGAACAGAAAGTCTTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SRMPEGQRGWVENHVLKYQWKMS*NRKSCL Trigger: CAAACAAGACTTTCTGTTCAAAGACATCTTCCATTG...GTATTTTAGTACATGGTTCTCTACCCAGCCCCTCTGTCCCTCAGGCATTCTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS GCA 72 bp | GTGCTTCTCAGTGGAACAAGCCTGGGCTTCTGCCTCTaGTGGCCTGTGGTCCACGTCCTCTTCCCTCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: VLLSGTSLGFCL*WPVVHVLFPHS Trigger: GCTGTGAGGGAAGAGGACGTGGACCACAGGCCAGCAGAGGCAGAAGCCCAGGCTTGTTCCACTGAGAAGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CCA 72 bp | GGCCACTCACTCTCTAAGGTCTCCTGGGCTGGTGTCTaGGACGCCCTCCTCCTCTTCCCCAACACAGATACC | + |
|
Preference number: 6 (lower is better) Translates to: GHSLSKVSWAGV*DALLLFPNTDT Trigger: GGTATCTGTGTTGGGGAAGAGGAGGAGGGCGTCCCAGACACCAGCCCAGGAGACCTTAGAGAGTGAGTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS TCA 72 bp | GATGGGGGCAGGGAGATACTCTCAGGCTGGCTCCCCTaGACAACATCCCAGGGTGCAACTTTCTGGAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: DGGREILSGWLP*TTSQGATFWRC Trigger: GCACCTCCAGAAAGTTGCACCCTGGGATGTTGTTCAGGGGAGCCAGCCTGAGAGTATCTCCCTGCCCCCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CCA 72 bp | TTGGCTTTCCGAGGCTGCTCACTCTCCGAGTTCTCCTaGGCTGGTGTCTGGGATTCCCTCCTTCTCTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: LAFRGCSLSEFS*AGVWDSLLLFP Trigger: GGGGAAGAGAAGGAGGGAATCCCAGACACCAGCCCAGGAGAACTCGGAGAGTGAGCAGCCTCGGAAAGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS TCA 72 bp | GTCCACGTCCTCTTCCCTCACAGCACCACTGCCTTCTaGGGAGTCCACCAGGGCATTCTTAGCCTTGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: VHVLFPHSTTAF*GVHQGILSLAV Trigger: GACAGCAAGGCTAAGAATGCCCTGGTGGACTCCTCAGAAGGCAGTGGTGCTGTGAGGGAAGAGGACGTGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CAA 90 bp | ACAGCACCACTGCCTTCTGAGGAGTCCACCAGGGCATTCTTAGCCTaGCTGTCTGTCACTGAGGCACTGTCACTAGATGTGGCAAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: TAPLPSEESTRAFLA*LSVTEALSLDVARA Trigger: TGCTCTTGCCACATCTAGTGACAGTGCCTCAGTGACAGACAGCAAGGCTAAGAATGCCCTGGTGGACTCCTCAGAAGGCAGTGGTGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CCA 72 bp | CTCTCACATTCTTCTCCAGCCCCGACAGCTCCTCCATaGTGTGTGCTATCAAGTCTCTCAGAGATGGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: LSHSSPAPTAPP*CVLSSLSEMVS Trigger: GGAGACCATCTCTGAGAGACTTGATAGCACACACCATGGAGGAGCTGTCGGGGCTGGAGAAGAATGTGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS TCA 72 bp | GTCCACCAGGGCATTCTTAGCCTTGCTGTCTGTCACTaGGGCACTGTCACTAGATGTGGCAAGAGCAACAGA | + |
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Preference number: 6 (lower is better) Translates to: VHQGILSLAVCH*GTVTRCGKSNR Trigger: TCTGTTGCTCTTGCCACATCTAGTGACAGTGCCTCAGTGACAGACAGCAAGGCTAAGAATGCCCTGGTGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CCA 72 bp | TCCCGGACAATTGACAGGCGACCCTCAGGGTCTTCCTaGAGTTTAGAATCCAGTTCTCTTAACTCCTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: SRTIDRRPSGSS*SLESSSLNSWG Trigger: TCCCCAGGAGTTAAGAGAACTGGATTCTAAACTCCAGGAAGACCCTGAGGGTCGCCTGTCAATTGTCCGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CAA 90 bp | CCACCATGGGTCATCCTTTTGGTAAGAATCTCTGTCCACTTACTTTaGCACTGCATCCAGTTCCGGGTCTCCACTCTAGCTTCCACCTCC | + |
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Preference number: 6 (lower is better) Translates to: PPWVILLVRISVHLL*HCIQFRVSTLASTS Trigger: GGAGGTGGAAGCTAGAGTGGAGACCCGGAACTGGATGCAGTGCAAAAGTAAGTGGACAGAGATTCTTACCAAAAGGATGACCCATGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS TCA 72 bp | CAACTTTCTGGAGGTGCTTTTGTTTCTTTCTGCTCCTaGCGTCACCGAGCAGCTCTCGACAGCCATGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: QLSGGAFVSFCS*RHRAALDSHVP Trigger: AGGAACATGGCTGTCGAGAGCTGCTCGGTGACGTCAGGAGCAGAAAGAAACAAAAGCACCTCCAGAAAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS TCA 72 bp | TTACTCCAAGCACCTTGGTTTCTAGTACCACCAATCTaGGAGAACTTGAGGGCGACTGAGAGGCTGCTTCGG | + |
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Preference number: 6 (lower is better) Translates to: LLQAPWFLVPPI*ENLRATERLLR Trigger: CCGAAGCAGCCTCTCAGTCGCCCTCAAGTTCTCTCAGATTGGTGGTACTAGAAACCAAGGTGCTTGGAGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS GCA 72 bp | ACTCTCAGGCTGGCTCCCCTGAACAACATCCCAGGGTaGAACTTTCTGGAGGTGCTTTTGTTTCTTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: TLRLAPLNNIPG*NFLEVLLFLSA Trigger: AGCAGAAAGAAACAAAAGCACCTCCAGAAAGTTGCACCCTGGGATGTTGTTCAGGGGAGCCAGCCTGAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS GCA 72 bp | CGAGCGATGCCCTTCCCAATGTGCAGTCTGAAGGCATaGTTCCGTTTTAGGTTGGTGATCAGAGTCTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: RAMPFPMCSLKA*FRFRLVIRVFS Trigger: GGAAAAGACTCTGATCACCAACCTAAAACGGAAGCATGCCTTCAGACTGCACATTGGGAAGGGCATCGCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CAA 90 bp | AACTCCTGGGGAGACATCTTCTTTAGGATCACGTCCTCCACAGCCTaGATTAGCCTCTGGGTTTCTGCCTTACTCCAAGCACCTTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: NSWGDIFFRITSSTA*ISLWVSALLQAPWF Trigger: AAACCAAGGTGCTTGGAGTAAGGCAGAAACCCAGAGGCTAATCAAGGCTGTGGAGGACGTGATCCTAAAGAAGATGTCTCCCCAGGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS TCA 72 bp | CCAAGATATGCCCTTGTAGAGTTTTTCCCGGACAATTaGCAGGCGACCCTCAGGGTCTTCCTGGAGTTTAGA | + |
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Preference number: 6 (lower is better) Translates to: PRYALVEFFPDN*QATLRVFLEFR Trigger: TCTAAACTCCAGGAAGACCCTGAGGGTCGCCTGTCAATTGTCCGGGAAAAACTCTACAAGGGCATATCTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS GCA 72 bp | CTGTATGTCAGGAATGAACTCTCGCAGCTGTCTCACTaGAGAGCCCAAATCAACATCCGAGTCATCAGACTC | + |
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Preference number: 6 (lower is better) Translates to: LYVRNELSQLSH*RAQINIRVIRL Trigger: GAGTCTGATGACTCGGATGTTGATTTGGGCTCTGCAGTGAGACAGCTGCGAGAGTTCATTCCTGACATACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CAA 72 bp | GGAGACATCTTCTTTAGGATCACGTCCTCCACAGCCTaGATTAGCCTCTGGGTTTCTGCCTTACTCCAAGCA | + |
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Preference number: 6 (lower is better) Translates to: GDIFFRITSSTA*ISLWVSALLQA Trigger: TGCTTGGAGTAAGGCAGAAACCCAGAGGCTAATCAAGGCTGTGGAGGACGTGATCCTAAAGAAGATGTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CAA 90 bp | CTTCATTGTACCTGCCTTTGTAGTTATTCACATCAAAGATCTTCTTaGCACGGTAGTACACGAGCTTCCAGGGCCGAGCGATGCCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: LHCTCLCSYSHQRSS*HGSTRASRAERCPS Trigger: GGAAGGGCATCGCTCGGCCCTGGAAGCTCGTGTACTACCGTGCAAAGAAGATCTTTGATGTGAATAACTACAAAGGCAGGTACAATGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS GCA 72 bp | CCTGCCTTTGTAGTTATTCACATCAAAGATCTTCTTTaGACGGTAGTACACGAGCTTCCAGGGCCGAGCGAT | + |
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Preference number: 6 (lower is better) Translates to: PAFVVIHIKDLL*TVVHELPGPSD Trigger: ATCGCTCGGCCCTGGAAGCTCGTGTACTACCGTGCAAAGAAGATCTTTGATGTGAATAACTACAAAGGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CCA 72 bp | TTTAGGATCACGTCCTCCACAGCCTTGATTAGCCTCTaGGTTTCTGCCTTACTCCAAGCACCTTGGTTTCTA | + |
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Preference number: 6 (lower is better) Translates to: FRITSSTALISL*VSALLQAPWFL Trigger: TAGAAACCAAGGTGCTTGGAGTAAGGCAGAAACCCAGAGGCTAATCAAGGCTGTGGAGGACGTGATCCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CAA 72 bp | ACCTGCCTTTGTAGTTATTCACATCAAAGATCTTCTTaGCACGGTAGTACACGAGCTTCCAGGGCCGAGCGA | + |
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Preference number: 6 (lower is better) Translates to: TCLCSYSHQRSS*HGSTRASRAER Trigger: TCGCTCGGCCCTGGAAGCTCGTGTACTACCGTGCAAAGAAGATCTTTGATGTGAATAACTACAAAGGCAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CAA 72 bp | ACCCCACGATACACGAACCCACCATGGGTCATCCTTTaGGTAAGAATCTCTGTCCACTTACTTTTGCACTGC | + |
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Preference number: 6 (lower is better) Translates to: TPRYTNPPWVIL*VRISVHLLLHC Trigger: GCAGTGCAAAAGTAAGTGGACAGAGATTCTTACCAAAAGGATGACCCATGGTGGGTTCGTGTATCGTGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CAA 72 bp | AACCTTTCAATAAGGGTGATTTTGGCCTGTAGAGCATaGACCCCACGATACACGAACCCACCATGGGTCATC | + |
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Preference number: 6 (lower is better) Translates to: NLSIRVILACRA*TPRYTNPPWVI Trigger: GATGACCCATGGTGGGTTCGTGTATCGTGGGGTCAATGCTCTACAGGCCAAAATCACCCTTATTGAAAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CAA 90 bp | AGAGCATTGACCCCACGATACACGAACCCACCATGGGTCATCCTTTaGGTAAGAATCTCTGTCCACTTACTTTTGCACTGCATCCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: RALTPRYTNPPWVIL*VRISVHLLLHCIQF Trigger: GAACTGGATGCAGTGCAAAAGTAAGTGGACAGAGATTCTTACCAAAAGGATGACCCATGGTGGGTTCGTGTATCGTGGGGTCAATGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS TCA 72 bp | AGCAGCGGGCAGCTCTCCTGTTTCACGCACTTTTGCTaGCCTTTGTCCCTTGCTCATATCAACATAAACAAT | + |
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Preference number: 6 (lower is better) Translates to: SSGQLSCFTHFC*PLSLAHININN Trigger: ATTGTTTATGTTGATATGAGCAAGGGACAAAGGTCAGCAAAAGTGCGTGAAACAGGAGAGCTGCCCGCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CCA 72 bp | GAATTGCTAGCTGATTCCGAATTGCTTTCTTCTTCATaGGTAGGTTCTAACCTCTGCATGGCTTCCCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: ELLADSELLSSS*VGSNLCMASLC Trigger: GCACAGGGAAGCCATGCAGAGGTTAGAACCTACCCATGAAGAAGAAAGCAATTCGGAATCAGCTAGCAATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CAA 72 bp | CCAAATCTAATAGCCACACCTTGTGCCTTAAATTCTTaGAAGCGCCCTAGGTCATCCCGATACATGCGTCTG | + |
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Preference number: 6 (lower is better) Translates to: PNLIATPCALNS*KRPRSSRYMRL Trigger: CAGACGCATGTATCGGGATGACCTAGGGCGCTTCAAAGAATTTAAGGCACAAGGTGTGGCTATTAGATTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CAA 72 bp | CCAATGTGCAGTCTGAAGGCATGCTTCCGTTTTAGGTaGGTGATCAGAGTCTTTTCCTCTGGGTATCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: PMCSLKACFRFR*VIRVFSSGYLS Trigger: AGACAGATACCCAGAGGAAAAGACTCTGATCACCAACCTAAAACGGAAGCATGCCTTCAGACTGCACATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CCA 72 bp | TCTTCCTGGAGTTTAGAATCCAGTTCTCTTAACTCCTaGGGAGACATCTTCTTTAGGATCACGTCCTCCACA | + |
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Preference number: 6 (lower is better) Translates to: SSWSLESSSLNS*GDIFFRITSST Trigger: TGTGGAGGACGTGATCCTAAAGAAGATGTCTCCCCAGGAGTTAAGAGAACTGGATTCTAAACTCCAGGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CCA 72 bp | TCCTCTGGGCTCCCTTCATCACTGTCATCATCGCAATaGAAGATGTCTTTGAACAGAAAGTCTTGTTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: SSGLPSSLSSSQ*KMSLNRKSCLG Trigger: TCCCAAACAAGACTTTCTGTTCAAAGACATCTTCCATTGCGATGATGACAGTGATGAAGGGAGCCCAGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CAA 72 bp | TCGCAATGGAAGATGTCTTTGAACAGAAAGTCTTGTTaGGGAGCTGCAGGTGTTTGGATCTGGCCGTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: SQWKMSLNRKSC*GAAGVWIWPSF Trigger: AAAAGACGGCCAGATCCAAACACCTGCAGCTCCCAAACAAGACTTTCTGTTCAAAGACATCTTCCATTGCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CAA 90 bp | TCATCAGACTCTCTCCTGTCCTCAGATATGTGTCTTGCTGCAGAATaGCTAGCTGATTCCGAATTGCTTTCTTCTTCATGGGTAGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: SSDSLLSSDMCLAAE*LADSELLSSSWVGS Trigger: AGAACCTACCCATGAAGAAGAAAGCAATTCGGAATCAGCTAGCAATTCTGCAGCAAGACACATATCTGAGGACAGGAGAGAGTCTGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CCA 72 bp | GCCCCAATCTTTTTCCAGTCGTTTCCATGGAGGGAATaGTATGCCTTCAGCTTCTTAGTATCTTCTTCATTG | + |
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Preference number: 6 (lower is better) Translates to: APIFFQSFPWRE*YAFSFLVSSSL Trigger: CAATGAAGAAGATACTAAGAAGCTGAAGGCATACCATTCCCTCCATGGAAACGACTGGAAAAAGATTGGGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CAA 72 bp | ATGTGTCTTGCTGCAGAATTGCTAGCTGATTCCGAATaGCTTTCTTCTTCATGGGTAGGTTCTAACCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: MCLAAELLADSE*LSSSWVGSNLC Trigger: GCAGAGGTTAGAACCTACCCATGAAGAAGAAAGCAATTCGGAATCAGCTAGCAATTCTGCAGCAAGACACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CAA 72 bp | TCTCTCCTGTCCTCAGATATGTGTCTTGCTGCAGAATaGCTAGCTGATTCCGAATTGCTTTCTTCTTCATGG | + |
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Preference number: 6 (lower is better) Translates to: SLLSSDMCLAAE*LADSELLSSSW Trigger: CCATGAAGAAGAAAGCAATTCGGAATCAGCTAGCAATTCTGCAGCAAGACACATATCTGAGGACAGGAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS TCA 72 bp | CTAGCAGGTTCTCCATGTTTTCTTTATCTACAAGGATaGTCCCAGTTTCCATATCCACCTCCAGAACACTAT | + |
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Preference number: 6 (lower is better) Translates to: LAGSPCFLYLQG*SQFPYPPPEHY Trigger: ATAGTGTTCTGGAGGTGGATATGGAAACTGGGATCATCCTTGTAGATAAAGAAAACATGGAGAACCTGCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS CAA 90 bp | ATCCCAGTTTCCATATCCACCTCCAGAACACTATTCTTTTTCTTCTaGTGGGCAGAAGTGGTTTTCTTAGCTTTAAGAAAGGTTTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: IPVSISTSRTLFFFF*WAEVVFLALRKVSG Trigger: TCCAGAAACCTTTCTTAAAGCTAAGAAAACCACTTCTGCCCACAAGAAGAAAAAGAATAGTGTTCTGGAGGTGGATATGGAAACTGGGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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| CDS GCA 72 bp | AATCTTTTTCCAGTCGTTTCCATGGAGGGAATGGTATaGCTTCAGCTTCTTAGTATCTTCTTCATTGTACCT | + |
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Preference number: 6 (lower is better) Translates to: NLFPVVSMEGMV*LQLLSIFFIVP Trigger: AGGTACAATGAAGAAGATACTAAGAAGCTGAAGGCATACCATTCCCTCCATGGAAACGACTGGAAAAAGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100237.4 |
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