Pregenerated sensors for TTC9C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071660Ensembl transcript IDs: ENSMUST00000088092.6, ENSMUST00000096751.11, ENSMUST00000153281.2
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGATCCAGGGTAAACAGAATGACAGACCAGCCACCAGTAGCTGAATaGCACCGAGGCAAGGCAAGGCAAGACAACCCTAGGTTTGCACCC | + |
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Preference number: 1 (lower is better) Translates to: GSRVNRMTDQPPVAE*HRGKARQDNPRFAP Trigger: GGGTGCAAACCTAGGGTTGTCTTGCCTTGCCTTGCCTCGGTGGCATTCAGCTACTGGTGGCTGGTCTGTCATTCTGTTTACCCTGGATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096751.11 |
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| 3UTR TCA 90 bp | GCCACCGAGGCAAGGCAAGGCAAGACAACCCTAGGTTTGCACCCATaGGTGACACAGCTTCTTCAGGATTCTATCAGGTGCTTCCAACAC | + |
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Preference number: 1 (lower is better) Translates to: ATEARQGKTTLGLHP*VTQLLQDSIRCFQH Trigger: GTGTTGGAAGCACCTGATAGAATCCTGAAGAAGCTGTGTCACTCATGGGTGCAAACCTAGGGTTGTCTTGCCTTGCCTTGCCTCGGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096751.11 |
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| 3UTR TCA 90 bp | TTTGAACTCAGGACTTTTGGAAGAGCAGTCAGTGCTCTTAACCGCTaGGCCATCTCTCCAGCCCCTACGGTACACTTTCAAGAAGACAAA | + |
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Preference number: 1 (lower is better) Translates to: FELRTFGRAVSALNR*AISPAPTVHFQEDK Trigger: TTTGTCTTCTTGAAAGTGTACCGTAGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCCAAAAGTCCTGAGTTCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096751.11 |
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| 3UTR CCA 90 bp | TACACACACACCCAGAGAAAGTGCACCAGCACTTGGGTTCCTTCTTaGCACAAGGTCAGAGAGAAGGTAAAAACAGGGTTTCATGTATCC | + |
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Preference number: 1 (lower is better) Translates to: YTHTQRKCTSTWVPS*HKVREKVKTGFHVS Trigger: GGATACATGAAACCCTGTTTTTACCTTCTCTCTGACCTTGTGCCAAGAAGGAACCCAAGTGCTGGTGCACTTTCTCTGGGTGTGTGTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096751.11 |
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| 3UTR CCA 90 bp | GTAAAGGGTGAACTCCTTTTGCTGAGTGAGGCTCAGATTCCCCAATaGGCCTTTGCTTGTCCACTTGAGTTCAAGTTGAGAAATGTCTCT | + |
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Preference number: 1 (lower is better) Translates to: VKGELLLLSEAQIPQ*AFACPLEFKLRNVS Trigger: AGAGACATTTCTCAACTTGAACTCAAGTGGACAAGCAAAGGCCCATTGGGGAATCTGAGCCTCACTCAGCAAAAGGAGTTCACCCTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
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| 3UTR GCA 90 bp | CAAGAAACATATTTGGTTTTTGATTATATAATGGCTAGCGACACATaGTTATTATCTCTGCTTATAAAGGTGGAGGCCTACTACATGGTC | + |
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Preference number: 1 (lower is better) Translates to: QETYLVFDYIMASDT*LLSLLIKVEAYYMV Trigger: GACCATGTAGTAGGCCTCCACCTTTATAAGCAGAGATAATAAGCATGTGTCGCTAGCCATTATATAATCAAAAACCAAATATGTTTCTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096751.11 |
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| 3UTR-3UTR TCA 90 bp | CACTCTGTAGACCAGACTAGCCTCAAACTCAGAAATCTGCCTGACTCCCCCAAGACTCCTTTTGCTGAGTaGGGCTCAGATTCCCCAATG | + |
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Preference number: 2 (lower is better) Translates to: HSVDQTSLKLRNLPDSPKTPFAE*GSDSPM Trigger: CATTGGGGAATCTGAGCCTCACTCAGCAAAAGGAGT...CTTGGGGGAGTCAGGCAGATTTCTGAGTTTGAGGCTAGTCTGGTCTACAGAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000096751.11 ENSMUST00000153281.2 |
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| 3UTR CAA 90 bp | CAAAATGGAAATCCACCTGGGTCAGAGGTAAAGGGTGAACTCCTTTaGCTGAGTGAGGCTCAGATTCCCCAATGGGCCTTTGCTTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: QNGNPPGSEVKGELL*LSEAQIPQWAFACP Trigger: TGGACAAGCAAAGGCCCATTGGGGAATCTGAGCCTCACTCAGCAAAAGGAGTTCACCCTTTACCTCTGACCCAGGTGGATTTCCATTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
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| 3UTR-3UTR CCA 90 bp | GATTCCTGTTTGCCTGTCCTTACTCTCTCACCCTTCACCGGCCCTCTCCTCTGTGAACAGGAAACAAAATaGAAATCCACCTGGGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: DSCLPVLTLSPFTGPLLCEQETK*KSTWVR Trigger: TCTGACCCAGGTGGATTTCCATTTTGTTTCCTGTTC...ACAGAGGAGAGGGCCGGTGAAGGGTGAGAGAGTAAGGACAGGCAAACAGGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
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| 3UTR-3UTR TCA 90 bp | AAGATTCCTGTTTGCCTGTCCTTACTCTCTCACCCTTCACCGGCCCTCTCCTCTCTTTGCTTGTCCACTTaGGTTCAAGTTGAGAAATGT | + |
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Preference number: 2 (lower is better) Translates to: KIPVCLSLLSHPSPALSSLCLST*VQVEKC Trigger: ACATTTCTCAACTTGAACTCAAGTGGACAAGCAAAG...AGAGGAGAGGGCCGGTGAAGGGTGAGAGAGTAAGGACAGGCAAACAGGAATCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGTGCACCAGCACTTGGGTTCCTTCTTGGCACAAGGTCAGAGAGAAGGTAACTTTGTCAGTGATCTaGGTGCAAGCAATAGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: RKCTSTWVPSWHKVREKVTLSVI*VQAIAR Trigger: CCTTGCTATTGCTTGCACTCAGATCACTGACAAAGT...TACCTTCTCTCTGACCTTGTGCCAAGAAGGAACCCAAGTGCTGGTGCACTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096751.11 |
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| 3UTR-3UTR CCA 90 bp | CACTCTGTAGACCAGACTAGCCTCAAACTCAGAAATCTGCCTGACTCCCCCAAGGAACAGGAAACAAAATaGAAATCCACCTGGGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: HSVDQTSLKLRNLPDSPKEQETK*KSTWVR Trigger: TCTGACCCAGGTGGATTTCCATTTTGTTTCCTGTTC...CTTGGGGGAGTCAGGCAGATTTCTGAGTTTGAGGCTAGTCTGGTCTACAGAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096751.11 ENSMUST00000153281.2 |
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| 3UTR CAA 90 bp | ATACACACACACCCAGAGAAAGTGCACCAGCACTTGGGTTCCTTCTaGGCACAAGGTCAGAGAGAAGGTAAAAACAGGGTTTCATGTATC | + |
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Preference number: 2 (lower is better) Translates to: IHTHPEKVHQHLGSF*AQGQREGKNRVSCI Trigger: GATACATGAAACCCTGTTTTTACCTTCTCTCTGACCTTGTGCCAAGAAGGAACCCAAGTGCTGGTGCACTTTCTCTGGGTGTGTGTGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096751.11 |
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| 3UTR-3UTR TCA 90 bp | AGAAGAGGGAGTCAGATCTCATTAGGGATGGTTGTGAGCCACCAAGTGGTCGCTCTTTGCTTGTCCACTTaGGTTCAAGTTGAGAAATGT | + |
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Preference number: 2 (lower is better) Translates to: RRGSQISLGMVVSHQVVALCLST*VQVEKC Trigger: ACATTTCTCAACTTGAACTCAAGTGGACAAGCAAAG...AGCGACCACTTGGTGGCTCACAACCATCCCTAATGAGATCTGACTCCCTCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096751.11 |
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| 3UTR-3UTR CCA 90 bp | AAGATTCCTGTTTGCCTGTCCTTACTCTCTCACCCTTCACCGGCCCTCTCCTCTAATAAACGATGCAGATaGTCTAAGGAGCAAAGAACT | + |
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Preference number: 2 (lower is better) Translates to: KIPVCLSLLSHPSPALSSNKRCR*SKEQRT Trigger: AGTTCTTTGCTCCTTAGACCATCTGCATCGTTTATT...AGAGGAGAGGGCCGGTGAAGGGTGAGAGAGTAAGGACAGGCAAACAGGAATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCAGAAGAGGGAGTCAGATCTCATTAGGGATGGTTGTGAGCCACCAAGTGGTTGTTATTTCGTTGGTTaGTTTTGTAGCACTGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: LQKRESDLIRDGCEPPSGCYFVG*FCSTGE Trigger: TTCCCCAGTGCTACAAAACCAACCAACGAAATAACA...ACCACTTGGTGGCTCACAACCATCCCTAATGAGATCTGACTCCCTCTTCTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096751.11 |
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| 3UTR-3UTR TCA 90 bp | CACTCTGTAGACCAGACTAGCCTCAAACTCAGAAATCTGCCTGACTCCCCCAAGCACTTGAGTTCAAGTTaGGAAATGTCTCTTTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: HSVDQTSLKLRNLPDSPKHLSSS*EMSLFF Trigger: GAAGAAAAGAGACATTTCTCAACTTGAACTCAAGTG...CTTGGGGGAGTCAGGCAGATTTCTGAGTTTGAGGCTAGTCTGGTCTACAGAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096751.11 ENSMUST00000153281.2 |
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| 3UTR-3UTR CCA 90 bp | CACTCTGTAGACCAGACTAGCCTCAAACTCAGAAATCTGCCTGACTCCCCCAAGAATAAACGATGCAGATaGTCTAAGGAGCAAAGAACT | + |
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Preference number: 2 (lower is better) Translates to: HSVDQTSLKLRNLPDSPKNKRCR*SKEQRT Trigger: AGTTCTTTGCTCCTTAGACCATCTGCATCGTTTATT...CTTGGGGGAGTCAGGCAGATTTCTGAGTTTGAGGCTAGTCTGGTCTACAGAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096751.11 ENSMUST00000153281.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCCAGCCCCTACGGTACACTTTCAAGAAGACAAAAGTAATGCCTTTCAGAAATCAAACTCAGAAATCTaGCTGACTCCCCCAAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: SPAPTVHFQEDKSNAFQKSNSEI*LTPPSA Trigger: AGCACTTGGGGGAGTCAGGCAGATTTCTGAGTTTGA...TTTCTGAAAGGCATTACTTTTGTCTTCTTGAAAGTGTACCGTAGGGGCTGGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000096751.11 |
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| 3UTR-3UTR CCA 90 bp | GGTTTATTATATGTAAGTACACTGTTGCTGTCTTCAGACACTCCAGAAGAGGGAACTTGGGTTCCTTCTTaGCACAAGGTCAGAGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: GLLYVSTLLLSSDTPEEGTWVPS*HKVREK Trigger: CTTCTCTCTGACCTTGTGCCAAGAAGGAACCCAAGT...TCCCTCTTCTGGAGTGTCTGAAGACAGCAACAGTGTACTTACATATAATAAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096751.11 |
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| 3UTR-3UTR GCA 90 bp | TCTCCAGCCCCTACGGTACACTTTCAAGAAGACAAAAGTAATGCCTTTCAGAAAATCTACCACCAAGTCTaGCTAGAAAGAAGATACTTT | + |
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Preference number: 2 (lower is better) Translates to: SPAPTVHFQEDKSNAFQKIYHQV*LERRYF Trigger: AAAGTATCTTCTTTCTAGGCAGACTTGGTGGTAGAT...TTTCTGAAAGGCATTACTTTTGTCTTCTTGAAAGTGTACCGTAGGGGCTGGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000096751.11 |
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| 3UTR-3UTR TCA 90 bp | CCCATTAAATCTATGCCACAAATACAGTTGATTCCACCCACAGTCGATGAATGTCACTTGAGTTCAAGTTaGGAAATGTCTCTTTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: PIKSMPQIQLIPPTVDECHLSSS*EMSLFF Trigger: GAAGAAAAGAGACATTTCTCAACTTGAACTCAAGTG...ACATTCATCGACTGTGGGTGGAATCAACTGTATTTGTGGCATAGATTTAATGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
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| 3UTR-3UTR CCA 90 bp | ATTAAATCTATGCCACAAATACAGTTGATTCCACCCACAGTCGATGAATGTTCTGAACAGGAAACAAAATaGAAATCCACCTGGGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: IKSMPQIQLIPPTVDECSEQETK*KSTWVR Trigger: TCTGACCCAGGTGGATTTCCATTTTGTTTCCTGTTC...AGAACATTCATCGACTGTGGGTGGAATCAACTGTATTTGTGGCATAGATTTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCCACCCACAGTCGATGAATGTTCTCAGATTGTAAGCCATACAAATACACTACACTTGAGTTCAAGTTaGGAAATGTCTCTTTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: IPPTVDECSQIVSHTNTLHLSSS*EMSLFF Trigger: GAAGAAAAGAGACATTTCTCAACTTGAACTCAAGTG...TAGTGTATTTGTATGGCTTACAATCTGAGAACATTCATCGACTGTGGGTGGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
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| 3UTR TCA 72 bp | CAGGGTAAACAGAATGACAGACCAGCCACCAGTAGCTaGATGCCACCGAGGCAAGGCAAGGCAAGACAACCC | + |
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Preference number: 3 (lower is better) Translates to: QGKQNDRPATSS*MPPRQGKARQP Trigger: GGGTTGTCTTGCCTTGCCTTGCCTCGGTGGCATTCAGCTACTGGTGGCTGGTCTGTCATTCTGTTTACCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096751.11 |
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| 3UTR GCA 72 bp | GTAAACAGAATGACAGACCAGCCACCAGTAGCTGAATaGCACCGAGGCAAGGCAAGGCAAGACAACCCTAGG | + |
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Preference number: 3 (lower is better) Translates to: VNRMTDQPPVAE*HRGKARQDNPR Trigger: CCTAGGGTTGTCTTGCCTTGCCTTGCCTCGGTGGCATTCAGCTACTGGTGGCTGGTCTGTCATTCTGTTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096751.11 |
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| 3UTR-3UTR CAA 90 bp | AGAAGAGGGAGTCAGATCTCATTAGGGATGGTTGTGAGCCACCAAGTGGTCGCTAAAGTGCACCAGCACTaGGGTTCCTTCTTGGCACAA | + |
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Preference number: 3 (lower is better) Translates to: RRGSQISLGMVVSHQVVAKVHQH*GSFLAQ Trigger: TTGTGCCAAGAAGGAACCCAAGTGCTGGTGCACTTT...AGCGACCACTTGGTGGCTCACAACCATCCCTAATGAGATCTGACTCCCTCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096751.11 |
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| 3UTR TCA 72 bp | AGGACTTTTGGAAGAGCAGTCAGTGCTCTTAACCGCTaGGCCATCTCTCCAGCCCCTACGGTACACTTTCAA | + |
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Preference number: 3 (lower is better) Translates to: RTFGRAVSALNR*AISPAPTVHFQ Trigger: TTGAAAGTGTACCGTAGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCCAAAAGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096751.11 |
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| 3UTR-3UTR CAA 90 bp | CTCCAGAAGAGGGAGTCAGATCTCATTAGGGATGGTTGTGAGCCACCAAGTGGTAAGGGTGAACTCCTTTaGCTGAGTGAGGCTCAGATT | + |
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Preference number: 3 (lower is better) Translates to: LQKRESDLIRDGCEPPSGKGELL*LSEAQI Trigger: AATCTGAGCCTCACTCAGCAAAAGGAGTTCACCCTT...ACCACTTGGTGGCTCACAACCATCCCTAATGAGATCTGACTCCCTCTTCTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096751.11 |
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| 3UTR GCA 72 bp | CAAAAGCATCTGAAGATACTACAGAAGATTCCTGTTTaGCTGTCCTTACTCTCTCACCCTTCACCGGCCCTC | + |
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Preference number: 3 (lower is better) Translates to: QKHLKILQKIPV*LSLLSHPSPAL Trigger: GAGGGCCGGTGAAGGGTGAGAGAGTAAGGACAGGCAAACAGGAATCTTCTGTAGTATCTTCAGATGCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
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| 3UTR CCA 72 bp | GAACTCCTTTTGCTGAGTGAGGCTCAGATTCCCCAATaGGCCTTTGCTTGTCCACTTGAGTTCAAGTTGAGA | + |
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Preference number: 3 (lower is better) Translates to: ELLLLSEAQIPQ*AFACPLEFKLR Trigger: TCTCAACTTGAACTCAAGTGGACAAGCAAAGGCCCATTGGGGAATCTGAGCCTCACTCAGCAAAAGGAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
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| 3UTR CCA 72 bp | ACCCAGAGAAAGTGCACCAGCACTTGGGTTCCTTCTTaGCACAAGGTCAGAGAGAAGGTAAAAACAGGGTTT | + |
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Preference number: 3 (lower is better) Translates to: TQRKCTSTWVPS*HKVREKVKTGF Trigger: AAACCCTGTTTTTACCTTCTCTCTGACCTTGTGCCAAGAAGGAACCCAAGTGCTGGTGCACTTTCTCTGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096751.11 |
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| 3UTR-3UTR CAA 90 bp | GATTCCTGTTTGCCTGTCCTTACTCTCTCACCCTTCACCGGCCCTCTCCTCTGTCCACTTGAGTTCAAGTaGAGAAATGTCTCTTTTCTT | + |
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Preference number: 3 (lower is better) Translates to: DSCLPVLTLSPFTGPLLCPLEFK*RNVSFL Trigger: AAGAAAAGAGACATTTCTCAACTTGAACTCAAGTGG...ACAGAGGAGAGGGCCGGTGAAGGGTGAGAGAGTAAGGACAGGCAAACAGGAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
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| 3UTR TCA 72 bp | ACTGGCCTTATAGTAATCCTTCTGCCTCAGCACTCTTaGGTGCTGAAATCACAGACATATGCTAACTTTAGC | + |
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Preference number: 3 (lower is better) Translates to: TGLIVILLPQHS*VLKSQTYANFS Trigger: GCTAAAGTTAGCATATGTCTGTGATTTCAGCACTCAAGAGTGCTGAGGCAGAAGGATTACTATAAGGCCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096751.11 |
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| 3UTR-3UTR CAA 90 bp | TTGATTCCACCCACAGTCGATGAATGTTCTCAGATTGTAAGCCATACAAATACAAAGGGTGAACTCCTTTaGCTGAGTGAGGCTCAGATT | + |
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Preference number: 3 (lower is better) Translates to: LIPPTVDECSQIVSHTNTKGELL*LSEAQI Trigger: AATCTGAGCCTCACTCAGCAAAAGGAGTTCACCCTT...TGTATTTGTATGGCTTACAATCTGAGAACATTCATCGACTGTGGGTGGAATCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
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| 3UTR-3UTR CAA 90 bp | AAGGTAAAAACAGGGTTTCATGTATCCCAGGCATTCACTCCAGAAGTTTTAAAAACAGAAGATTCCTGTTaGCCTGTCCTTACTCTCTCA | + |
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Preference number: 3 (lower is better) Translates to: KVKTGFHVSQAFTPEVLKTEDSC*PVLTLS Trigger: TGAGAGAGTAAGGACAGGCAAACAGGAATCTTCTGT...TTTTAAAACTTCTGGAGTGAATGCCTGGGATACATGAAACCCTGTTTTTACCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000096751.11 |
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| 3UTR TCA 72 bp | TATGCCACAAATACAGTTGATTCCACCCACAGTCGATaGATGTTCTCAGATTGTAAGCCATACAAATACACT | + |
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Preference number: 3 (lower is better) Translates to: YATNTVDSTHSR*MFSDCKPYKYT Trigger: AGTGTATTTGTATGGCTTACAATCTGAGAACATTCATCGACTGTGGGTGGAATCAACTGTATTTGTGGCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
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| 3UTR-3UTR CAA 90 bp | TTGATTCCACCCACAGTCGATGAATGTTCTCAGATTGTAAGCCATACAAATACACCACTTGAGTTCAAGTaGAGAAATGTCTCTTTTCTT | + |
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Preference number: 3 (lower is better) Translates to: LIPPTVDECSQIVSHTNTPLEFK*RNVSFL Trigger: AAGAAAAGAGACATTTCTCAACTTGAACTCAAGTGG...TGTATTTGTATGGCTTACAATCTGAGAACATTCATCGACTGTGGGTGGAATCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
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| 3UTR TCA 72 bp | CACAACAGCCAGGAAGCAAAACCAGCTCTGAAGAAGTaGAACATGCAAGATGACAATGATTTTAATTATTTT | + |
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Preference number: 3 (lower is better) Translates to: HNSQEAKPALKK*NMQDDNDFNYF Trigger: AAAATAATTAAAATCATTGTCATCTTGCATGTTTCACTTCTTCAGAGCTGGTTTTGCTTCCTGGCTGTTGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096751.11 |
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| CDS-3UTR CCA 90 bp | GATTCCTGTTTGCCTGTCCTTACTCTCTCACCCTTCACCGGCCCTCTCCTCTGTTTCACTGGCTCCATCTaGAGGAGACAGGCAGCTAGG | + |
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Preference number: 4 (lower is better) Translates to: DSCLPVLTLSPFTGPLLCFTGSI*RRQAAR Trigger: CCTAGCTGCCTGTCTCCTCCAGATGGAGCCAGTGAA...ACAGAGGAGAGGGCCGGTGAAGGGTGAGAGAGTAAGGACAGGCAAACAGGAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 |
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| 3UTR CAA 72 bp | GCCACCAAGTGGTCGCTGCATTTGAACTCAGGACTTTaGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: ATKWSLHLNSGL*EEQSVLLTAEP Trigger: TGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCCAAAAGTCCTGAGTTCAAATGCAGCGACCACTTGGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096751.11 |
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| CDS-3UTR CCA 90 bp | AGTGAGGCTCAGATTCCCCAATGGGCCTTTGCTTGTCCACTTGAGTTCAAGTTGTTCACTGGCTCCATCTaGAGGAGACAGGCAGCTAGG | + |
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Preference number: 4 (lower is better) Translates to: SEAQIPQWAFACPLEFKLFTGSI*RRQAAR Trigger: CCTAGCTGCCTGTCTCCTCCAGATGGAGCCAGTGAA...CAACTTGAACTCAAGTGGACAAGCAAAGGCCCATTGGGGAATCTGAGCCTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 |
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| CDS-3UTR TCA 90 bp | AGTGAGGCTCAGATTCCCCAATGGGCCTTTGCTTGTCCACTTGAGTTCAAGTTGGTAGCTGCTGAGTTCTaGCTGCGTCAACTGGAGGTA | + |
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Preference number: 4 (lower is better) Translates to: SEAQIPQWAFACPLEFKLVAAEF*LRQLEV Trigger: TACCTCCAGTTGACGCAGTCAGAACTCAGCAGCTAC...CAACTTGAACTCAAGTGGACAAGCAAAGGCCCATTGGGGAATCTGAGCCTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
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| CDS-3UTR TCA 90 bp | CACTCTGTAGACCAGACTAGCCTCAAACTCAGAAATCTGCCTGACTCCCCCAAGTCCTATGGTAGCTGCTaGGTTCTGACTGCGTCAACT | + |
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Preference number: 4 (lower is better) Translates to: HSVDQTSLKLRNLPDSPKSYGSC*VLTAST Trigger: AGTTGACGCAGTCAGAACTCAGCAGCTACCATAGGA...CTTGGGGGAGTCAGGCAGATTTCTGAGTTTGAGGCTAGTCTGGTCTACAGAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096751.11 ENSMUST00000153281.2 |
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| 3UTR CAA 72 bp | AATCCACCTGGGTCAGAGGTAAAGGGTGAACTCCTTTaGCTGAGTGAGGCTCAGATTCCCCAATGGGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NPPGSEVKGELL*LSEAQIPQWAF Trigger: AAAGGCCCATTGGGGAATCTGAGCCTCACTCAGCAAAAGGAGTTCACCCTTTACCTCTGACCCAGGTGGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
||
| CDS-3UTR TCA 90 bp | AGTGAGGCTCAGATTCCCCAATGGGCCTTTGCTTGTCCACTTGAGTTCAAGTTGTCCTATGGTAGCTGCTaGGTTCTGACTGCGTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: SEAQIPQWAFACPLEFKLSYGSC*VLTAST Trigger: AGTTGACGCAGTCAGAACTCAGCAGCTACCATAGGA...CAACTTGAACTCAAGTGGACAAGCAAAGGCCCATTGGGGAATCTGAGCCTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
||
| CDS-3UTR CCA 90 bp | CAAAAGCATCTGAAGATACTACAGAAGATTCCTGTTTGCCTGTCCTTACTCTCTCTCCGGTGTGAGAGCTaGGCCCTGAGGTCCCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: QKHLKILQKIPVCLSLLSLRCES*ALRSQT Trigger: AGTCTGGGACCTCAGGGCCCAGCTCTCACACCGGAG...AGAGAGTAAGGACAGGCAAACAGGAATCTTCTGTAGTATCTTCAGATGCTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
||
| CDS-3UTR TCA 90 bp | TCAGAGGTAAAGGGTGAACTCCTTTTGCTGAGTGAGGCTCAGATTCCCCAATGGCGTTCTAGGACTTTCTaGCTGTATTCCCTCACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SEVKGELLLLSEAQIPQWRSRTF*LYSLTR Trigger: ACGAGTGAGGGAATACAGTCAGAAAGTCCTAGAACG...CCATTGGGGAATCTGAGCCTCACTCAGCAAAAGGAGTTCACCCTTTACCTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 |
||
| CDS-3UTR GCA 90 bp | TCAGAGGTAAAGGGTGAACTCCTTTTGCTGAGTGAGGCTCAGATTCCCCAATGGTGGGTCTGGATGGTGTaGAGTATGTTTTCTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SEVKGELLLLSEAQIPQWWVWMV*SMFSCS Trigger: GGAGCAAGAAAACATACTGCACACCATCCAGACCCA...CCATTGGGGAATCTGAGCCTCACTCAGCAAAAGGAGTTCACCCTTTACCTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
||
| CDS-3UTR CCA 90 bp | GGGTCAGAGGTAAAGGGTGAACTCCTTTTGCTGAGTGAGGCTCAGATTCCCCAAAGCAGTGGGTCTGGATaGTGTGCAGTATGTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GSEVKGELLLLSEAQIPQSSGSG*CAVCFL Trigger: AAGAAAACATACTGCACACCATCCAGACCCACTGCT...TTGGGGAATCTGAGCCTCACTCAGCAAAAGGAGTTCACCCTTTACCTCTGACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
||
| CDS-3UTR TCA 90 bp | CCCATTAAATCTATGCCACAAATACAGTTGATTCCACCCACAGTCGATGAATGTTCCAGACCCCGCAGCTaGAGAAGAGCTCGATGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PIKSMPQIQLIPPTVDECSRPRS*RRARWY Trigger: GTACCATCGAGCTCTTCTTCAGCTGCGGGGTCTGGA...ACATTCATCGACTGTGGGTGGAATCAACTGTATTTGTGGCATAGATTTAATGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
||
| CDS-3UTR TCA 90 bp | GGTTTATTATATGTAAGTACACTGTTGCTGTCTTCAGACACTCCAGAAGAGGGATCCAGACCCCGCAGCTaGAGAAGAGCTCGATGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GLLYVSTLLLSSDTPEEGSRPRS*RRARWY Trigger: GTACCATCGAGCTCTTCTTCAGCTGCGGGGTCTGGA...TCCCTCTTCTGGAGTGTCTGAAGACAGCAACAGTGTACTTACATATAATAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096751.11 |
||
| CDS-3UTR TCA 90 bp | ATTCCACCCACAGTCGATGAATGTTCTCAGATTGTAAGCCATACAAATACACTATCCAGACCCCGCAGCTaGAGAAGAGCTCGATGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: IPPTVDECSQIVSHTNTLSRPRS*RRARWY Trigger: GTACCATCGAGCTCTTCTTCAGCTGCGGGGTCTGGA...TAGTGTATTTGTATGGCTTACAATCTGAGAACATTCATCGACTGTGGGTGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
||
| CDS-3UTR TCA 90 bp | ATTCCACCCACAGTCGATGAATGTTCTCAGATTGTAAGCCATACAAATACACTAGTGAGAGCTGGGCCCTaGGGTCCCAGACTAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: IPPTVDECSQIVSHTNTLVRAGP*GPRLER Trigger: TCTTTCTAGTCTGGGACCTCAGGGCCCAGCTCTCAC...TAGTGTATTTGTATGGCTTACAATCTGAGAACATTCATCGACTGTGGGTGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
||
| CDS-3UTR TCA 90 bp | TTGATTCCACCCACAGTCGATGAATGTTCTCAGATTGTAAGCCATACAAATACAGTGAGAGCTGGGCCCTaGGGTCCCAGACTAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LIPPTVDECSQIVSHTNTVRAGP*GPRLER Trigger: TCTTTCTAGTCTGGGACCTCAGGGCCCAGCTCTCAC...TGTATTTGTATGGCTTACAATCTGAGAACATTCATCGACTGTGGGTGGAATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
||
| CDS-3UTR TCA 90 bp | TCTCCAGCCCCTACGGTACACTTTCAAGAAGACAAAAGTAATGCCTTTCAGAAAGTAGCTGCTGAGTTCTaGCTGCGTCAACTGGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SPAPTVHFQEDKSNAFQKVAAEF*LRQLEV Trigger: TACCTCCAGTTGACGCAGTCAGAACTCAGCAGCTAC...TTTCTGAAAGGCATTACTTTTGTCTTCTTGAAAGTGTACCGTAGGGGCTGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096751.11 |
||
| CDS-3UTR GCA 90 bp | CCCATTAAATCTATGCCACAAATACAGTTGATTCCACCCACAGTCGATGAATGTCTGCTGAGTTCTGACTaGGTCAACTGGAGGTACCGC | + |
|
Preference number: 4 (lower is better) Translates to: PIKSMPQIQLIPPTVDECLLSSD*VNWRYR Trigger: GCGGTACCTCCAGTTGACGCAGTCAGAACTCAGCAG...ACATTCATCGACTGTGGGTGGAATCAACTGTATTTGTGGCATAGATTTAATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
||
| CDS-3UTR CCA 90 bp | CTGTGTCTGAGAACATTTAATAACACCCCATTAAATCTATGCCACAAATACAGTCTCCGGTGTGAGAGCTaGGCCCTGAGGTCCCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LCLRTFNNTPLNLCHKYSLRCES*ALRSQT Trigger: AGTCTGGGACCTCAGGGCCCAGCTCTCACACCGGAG...ACTGTATTTGTGGCATAGATTTAATGGGGTGTTATTAAATGTTCTCAGACACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
||
| CDS-3UTR CCA 90 bp | AACAGGAAACAAAATGGAAATCCACCTGGGTCAGAGGTAAAGGGTGAACTCCTTCCCGATACAAGGCCTTaGCATTATCGGGTTGTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: NRKQNGNPPGSEVKGELLPDTRP*HYRVVV Trigger: AACGACAACCCGATAATGCCAAGGCCTTGTATCGGG...AAGGAGTTCACCCTTTACCTCTGACCCAGGTGGATTTCCATTTTGTTTCCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 |
||
| 3UTR CAA 72 bp | ACAAAAGCATCTGAAGATACTACAGAAGATTCCTGTTaGCCTGTCCTTACTCTCTCACCCTTCACCGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TKASEDTTEDSC*PVLTLSPFTGP Trigger: AGGGCCGGTGAAGGGTGAGAGAGTAAGGACAGGCAAACAGGAATCTTCTGTAGTATCTTCAGATGCTTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
||
| CDS-3UTR TCA 90 bp | TTGATTCCACCCACAGTCGATGAATGTTCTCAGATTGTAAGCCATACAAATACAGTAGCTGCTGAGTTCTaGCTGCGTCAACTGGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LIPPTVDECSQIVSHTNTVAAEF*LRQLEV Trigger: TACCTCCAGTTGACGCAGTCAGAACTCAGCAGCTAC...TGTATTTGTATGGCTTACAATCTGAGAACATTCATCGACTGTGGGTGGAATCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
||
| CDS-3UTR GCA 90 bp | AAGGTAAAAACAGGGTTTCATGTATCCCAGGCATTCACTCCAGAAGTTTTAAAACTGCTGAGTTCTGACTaGGTCAACTGGAGGTACCGC | + |
|
Preference number: 4 (lower is better) Translates to: KVKTGFHVSQAFTPEVLKLLSSD*VNWRYR Trigger: GCGGTACCTCCAGTTGACGCAGTCAGAACTCAGCAG...TTTTAAAACTTCTGGAGTGAATGCCTGGGATACATGAAACCCTGTTTTTACCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000096751.11 |
||
| CDS-3UTR CCA 90 bp | AACAGGAAACAAAATGGAAATCCACCTGGGTCAGAGGTAAAGGGTGAACTCCTTAGCAGTGGGTCTGGATaGTGTGCAGTATGTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NRKQNGNPPGSEVKGELLSSGSG*CAVCFL Trigger: AAGAAAACATACTGCACACCATCCAGACCCACTGCT...AAGGAGTTCACCCTTTACCTCTGACCCAGGTGGATTTCCATTTTGTTTCCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
||
| CDS-3UTR CCA 90 bp | TTGATTCCACCCACAGTCGATGAATGTTCTCAGATTGTAAGCCATACAAATACATCTGACTGCGTCAACTaGAGGTACCGCCGAACATTG | + |
|
Preference number: 4 (lower is better) Translates to: LIPPTVDECSQIVSHTNTSDCVN*RYRRTL Trigger: CAATGTTCGGCGGTACCTCCAGTTGACGCAGTCAGA...TGTATTTGTATGGCTTACAATCTGAGAACATTCATCGACTGTGGGTGGAATCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
||
| CDS-3UTR CCA 90 bp | TCAGATTGTAAGCCATACAAATACACTAGGGGACAGACAATAAACGATGCAGATTCTGACTGCGTCAACTaGAGGTACCGCCGAACATTG | + |
|
Preference number: 4 (lower is better) Translates to: SDCKPYKYTRGQTINDADSDCVN*RYRRTL Trigger: CAATGTTCGGCGGTACCTCCAGTTGACGCAGTCAGA...ATCTGCATCGTTTATTGTCTGTCCCCTAGTGTATTTGTATGGCTTACAATCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
||
| CDS-3UTR GCA 90 bp | CCCATTAAATCTATGCCACAAATACAGTTGATTCCACCCACAGTCGATGAATGTTGGGTCTGGATGGTGTaGAGTATGTTTTCTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PIKSMPQIQLIPPTVDECWVWMV*SMFSCS Trigger: GGAGCAAGAAAACATACTGCACACCATCCAGACCCA...ACATTCATCGACTGTGGGTGGAATCAACTGTATTTGTGGCATAGATTTAATGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
||
| CDS-3UTR CCA 90 bp | ATTAAATCTATGCCACAAATACAGTTGATTCCACCCACAGTCGATGAATGTTCTTCTGACTGCGTCAACTaGAGGTACCGCCGAACATTG | + |
|
Preference number: 4 (lower is better) Translates to: IKSMPQIQLIPPTVDECSSDCVN*RYRRTL Trigger: CAATGTTCGGCGGTACCTCCAGTTGACGCAGTCAGA...AGAACATTCATCGACTGTGGGTGGAATCAACTGTATTTGTGGCATAGATTTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
||
| CDS-3UTR TCA 90 bp | ATTCCACCCACAGTCGATGAATGTTCTCAGATTGTAAGCCATACAAATACACTACGTTCTAGGACTTTCTaGCTGTATTCCCTCACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: IPPTVDECSQIVSHTNTLRSRTF*LYSLTR Trigger: ACGAGTGAGGGAATACAGTCAGAAAGTCCTAGAACG...TAGTGTATTTGTATGGCTTACAATCTGAGAACATTCATCGACTGTGGGTGGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 |
||
| CDS-3UTR GCA 90 bp | TTGATTCCACCCACAGTCGATGAATGTTCTCAGATTGTAAGCCATACAAATACATGGGTCTGGATGGTGTaGAGTATGTTTTCTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LIPPTVDECSQIVSHTNTWVWMV*SMFSCS Trigger: GGAGCAAGAAAACATACTGCACACCATCCAGACCCA...TGTATTTGTATGGCTTACAATCTGAGAACATTCATCGACTGTGGGTGGAATCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
||
| CDS-3UTR CCA 90 bp | ATTAAATCTATGCCACAAATACAGTTGATTCCACCCACAGTCGATGAATGTTCTCCCGATACAAGGCCTTaGCATTATCGGGTTGTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: IKSMPQIQLIPPTVDECSPDTRP*HYRVVV Trigger: AACGACAACCCGATAATGCCAAGGCCTTGTATCGGG...AGAACATTCATCGACTGTGGGTGGAATCAACTGTATTTGTGGCATAGATTTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 |
||
| CDS-3UTR CCA 90 bp | ATTAAATCTATGCCACAAATACAGTTGATTCCACCCACAGTCGATGAATGTTCTAGCAGTGGGTCTGGATaGTGTGCAGTATGTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IKSMPQIQLIPPTVDECSSSGSG*CAVCFL Trigger: AAGAAAACATACTGCACACCATCCAGACCCACTGCT...AGAACATTCATCGACTGTGGGTGGAATCAACTGTATTTGTGGCATAGATTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
||
| CDS-3UTR CAA 90 bp | AAGATTCCTGTTTGCCTGTCCTTACTCTCTCACCCTTCACCGGCCCTCTCCTCTGCCCGATACAAGGCCTaGGCATTATCGGGTTGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: KIPVCLSLLSHPSPALSSARYKA*ALSGCR Trigger: ACGACAACCCGATAATGCCAAGGCCTTGTATCGGGC...AGAGGAGAGGGCCGGTGAAGGGTGAGAGAGTAAGGACAGGCAAACAGGAATCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 |
||
| CDS TCA 90 bp | AGACTAGAAAGAGGGGAAGGCAGACTTGGGTCCAGACCCCGCAGCTaGAGAAGAGCTCGATGGTACCTACTCACAGCATCTCGGTACTTT | + |
|
Preference number: 5 (lower is better) Translates to: RLERGEGRLGSRPRS*RRARWYLLTASRYF Trigger: AAAGTACCGAGATGCTGTGAGTAGGTACCATCGAGCTCTTCTTCAGCTGCGGGGTCTGGACCCAAGTCTGCCTTCCCCTCTTTCTAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
||
| CDS TCA 90 bp | GCCCAGGTACAGCTGTTTCTCCTTCCTATGGTAGCTGCTGAGTTCTaGCTGCGTCAACTGGAGGTACCGCCGAACATTGGCATCTTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: AQVQLFLLPMVAAEF*LRQLEVPPNIGIFR Trigger: CCTAAAGATGCCAATGTTCGGCGGTACCTCCAGTTGACGCAGTCAGAACTCAGCAGCTACCATAGGAAGGAGAAACAGCTGTACCTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 |
||
| CDS TCA 90 bp | CAAACATGCCCAGGTACAGCTGTTTCTCCTTCCTATGGTAGCTGCTaGGTTCTGACTGCGTCAACTGGAGGTACCGCCGAACATTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: QTCPGTAVSPSYGSC*VLTASTGGTAEHWH Trigger: ATGCCAATGTTCGGCGGTACCTCCAGTTGACGCAGTCAGAACTCAGCAGCTACCATAGGAAGGAGAAACAGCTGTACCTGGGCATGTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
||
| CDS CCA 90 bp | AGTCTTGCAGGTGGAAGAAGGCTACTCCAGCCCGATACAAGGCCTTaGCATTATCGGGTTGTCGTTCTAGGACTTTCTGACTGTATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SLAGGRRLLQPDTRP*HYRVVVLGLSDCIP Trigger: GGGAATACAGTCAGAAAGTCCTAGAACGACAACCCGATAATGCCAAGGCCTTGTATCGGGCTGGAGTAGCCTTCTTCCACCTGCAAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 |
||
| CDS-3UTR CAA 90 bp | TTGATTCCACCCACAGTCGATGAATGTTCTCAGATTGTAAGCCATACAAATACAGAGGGGAAGGCAGACTaGGGTCCAGACCCCGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LIPPTVDECSQIVSHTNTEGKAD*GPDPAA Trigger: AGCTGCGGGGTCTGGACCCAAGTCTGCCTTCCCCTC...TGTATTTGTATGGCTTACAATCTGAGAACATTCATCGACTGTGGGTGGAATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
||
| CDS-3UTR CAA 90 bp | ATTCCACCCACAGTCGATGAATGTTCTCAGATTGTAAGCCATACAAATACACTAGAGGGGAAGGCAGACTaGGGTCCAGACCCCGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: IPPTVDECSQIVSHTNTLEGKAD*GPDPAA Trigger: AGCTGCGGGGTCTGGACCCAAGTCTGCCTTCCCCTC...TAGTGTATTTGTATGGCTTACAATCTGAGAACATTCATCGACTGTGGGTGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
||
| CDS-3UTR CAA 90 bp | GCTCAGATTCCCCAATGGGCCTTTGCTTGTCCACTTGAGTTCAAGTTGAGAAATGCCCGATACAAGGCCTaGGCATTATCGGGTTGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: AQIPQWAFACPLEFKLRNARYKA*ALSGCR Trigger: ACGACAACCCGATAATGCCAAGGCCTTGTATCGGGC...ATTTCTCAACTTGAACTCAAGTGGACAAGCAAAGGCCCATTGGGGAATCTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 |
||
| CDS-3UTR CAA 90 bp | ATTAAATCTATGCCACAAATACAGTTGATTCCACCCACAGTCGATGAATGTTCTGAGGGGAAGGCAGACTaGGGTCCAGACCCCGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: IKSMPQIQLIPPTVDECSEGKAD*GPDPAA Trigger: AGCTGCGGGGTCTGGACCCAAGTCTGCCTTCCCCTC...AGAACATTCATCGACTGTGGGTGGAATCAACTGTATTTGTGGCATAGATTTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
||
| CDS-3UTR CAA 90 bp | AAGGTAAAAACAGGGTTTCATGTATCCCAGGCATTCACTCCAGAAGTTTTAAAAGTGCAGTATGTTTTCTaGCTCCGGTGTGAGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KVKTGFHVSQAFTPEVLKVQYVF*LRCESW Trigger: CCAGCTCTCACACCGGAGCAAGAAAACATACTGCAC...TTTTAAAACTTCTGGAGTGAATGCCTGGGATACATGAAACCCTGTTTTTACCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000096751.11 |
||
| CDS-3UTR CAA 90 bp | CTGTGTCTGAGAACATTTAATAACACCCCATTAAATCTATGCCACAAATACAGTGTGCAGTATGTTTTCTaGCTCCGGTGTGAGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LCLRTFNNTPLNLCHKYSVQYVF*LRCESW Trigger: CCAGCTCTCACACCGGAGCAAGAAAACATACTGCAC...ACTGTATTTGTGGCATAGATTTAATGGGGTGTTATTAAATGTTCTCAGACACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
||
| CDS-3UTR CAA 90 bp | TTGATTCCACCCACAGTCGATGAATGTTCTCAGATTGTAAGCCATACAAATACAATTGGCATCTTTAGGTaGCCTATTGACAGCAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LIPPTVDECSQIVSHTNTIGIFR*PIDSSK Trigger: CTTGCTGCTGTCAATAGGCAACCTAAAGATGCCAAT...TGTATTTGTATGGCTTACAATCTGAGAACATTCATCGACTGTGGGTGGAATCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 |
||
| CDS-3UTR CAA 90 bp | ATTAAATCTATGCCACAAATACAGTTGATTCCACCCACAGTCGATGAATGTTCTATTGGCATCTTTAGGTaGCCTATTGACAGCAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: IKSMPQIQLIPPTVDECSIGIFR*PIDSSK Trigger: CTTGCTGCTGTCAATAGGCAACCTAAAGATGCCAAT...AGAACATTCATCGACTGTGGGTGGAATCAACTGTATTTGTGGCATAGATTTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 |
||
| CDS CAA 90 bp | CCTATTGACAGCAGCAAGCAGGTGGTGTCGAGCCCGGTCATAGTCTaGCAGGTGGAAGAAGGCTACTCCAGCCCGATACAAGGCCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PIDSSKQVVSSPVIV*QVEEGYSSPIQGLG Trigger: GCCAAGGCCTTGTATCGGGCTGGAGTAGCCTTCTTCCACCTGCAAGACTATGACCGGGCTCGACACCACCTGCTTGCTGCTGTCAATAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 |
||
| CDS TCA 72 bp | AGAGGGGAAGGCAGACTTGGGTCCAGACCCCGCAGCTaGAGAAGAGCTCGATGGTACCTACTCACAGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: RGEGRLGSRPRS*RRARWYLLTAS Trigger: AGATGCTGTGAGTAGGTACCATCGAGCTCTTCTTCAGCTGCGGGGTCTGGACCCAAGTCTGCCTTCCCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
||
| CDS CAA 72 bp | AGCAGCAAGCAGGTGGTGTCGAGCCCGGTCATAGTCTaGCAGGTGGAAGAAGGCTACTCCAGCCCGATACAA | + |
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Preference number: 6 (lower is better) Translates to: SSKQVVSSPVIV*QVEEGYSSPIQ Trigger: TTGTATCGGGCTGGAGTAGCCTTCTTCCACCTGCAAGACTATGACCGGGCTCGACACCACCTGCTTGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 |
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| CDS CAA 72 bp | AGGTACCGCCGAACATTGGCATCTTTAGGTTGCCTATaGACAGCAGCAAGCAGGTGGTGTCGAGCCCGGTCA | + |
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Preference number: 6 (lower is better) Translates to: RYRRTLASLGCL*TAASRWCRARS Trigger: TGACCGGGCTCGACACCACCTGCTTGCTGCTGTCAATAGGCAACCTAAAGATGCCAATGTTCGGCGGTACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 |
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| CDS TCA 72 bp | CAGCTGTTTCTCCTTCCTATGGTAGCTGCTGAGTTCTaGCTGCGTCAACTGGAGGTACCGCCGAACATTGGC | + |
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Preference number: 6 (lower is better) Translates to: QLFLLPMVAAEF*LRQLEVPPNIG Trigger: GCCAATGTTCGGCGGTACCTCCAGTTGACGCAGTCAGAACTCAGCAGCTACCATAGGAAGGAGAAACAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
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| CDS TCA 72 bp | CCAGGTACAGCTGTTTCTCCTTCCTATGGTAGCTGCTaGGTTCTGACTGCGTCAACTGGAGGTACCGCCGAA | + |
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Preference number: 6 (lower is better) Translates to: PGTAVSPSYGSC*VLTASTGGTAE Trigger: TTCGGCGGTACCTCCAGTTGACGCAGTCAGAACTCAGCAGCTACCATAGGAAGGAGAAACAGCTGTACCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 ENSMUST00000153281.2 |
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| CDS GCA 72 bp | AACTGGAGGTACCGCCGAACATTGGCATCTTTAGGTTaGCTATTGACAGCAGCAAGCAGGTGGTGTCGAGCC | + |
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Preference number: 6 (lower is better) Translates to: NWRYRRTLASLG*LLTAASRWCRA Trigger: GGCTCGACACCACCTGCTTGCTGCTGTCAATAGGCAACCTAAAGATGCCAATGTTCGGCGGTACCTCCAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 |
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| CDS CCA 72 bp | GTTCTGACTGCGTCAACTGGAGGTACCGCCGAACATTaGCATCAGCTAGGTTGTTGTAGCAGTGGGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: VLTASTGGTAEH*HQLGCCSSGSG Trigger: TCCAGACCCACTGCTACAACAACCTAGCTGATGCCAATGTTCGGCGGTACCTCCAGTTGACGCAGTCAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153281.2 |
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| CDS CAA 72 bp | CAACTGGAGGTACCGCCGAACATTGGCATCTTTAGGTaGCCTATTGACAGCAGCAAGCAGGTGGTGTCGAGC | + |
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Preference number: 6 (lower is better) Translates to: QLEVPPNIGIFR*PIDSSKQVVSS Trigger: GCTCGACACCACCTGCTTGCTGCTGTCAATAGGCAACCTAAAGATGCCAATGTTCGGCGGTACCTCCAGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 |
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| CDS CCA 72 bp | GGTGGAAGAAGGCTACTCCAGCCCGATACAAGGCCTTaGCATTATCGGGTTGTCGTTCTAGGACTTTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: GGRRLLQPDTRP*HYRVVVLGLSD Trigger: GTCAGAAAGTCCTAGAACGACAACCCGATAATGCCAAGGCCTTGTATCGGGCTGGAGTAGCCTTCTTCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 |
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| CDS CAA 72 bp | AGTTCTGACTGCGTCAACTGGAGGTACCGCCGAACATaGGCATCTTTAGGTTGCCTATTGACAGCAGCAAGC | + |
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Preference number: 6 (lower is better) Translates to: SSDCVNWRYRRT*ASLGCLLTAAS Trigger: GCTTGCTGCTGTCAATAGGCAACCTAAAGATGCCAATGTTCGGCGGTACCTCCAGTTGACGCAGTCAGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088092.6 ENSMUST00000096751.11 |
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