Pregenerated sensors for TTC9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042734Ensembl transcript IDs: ENSMUST00000036116.6, ENSMUST00000218362.2
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGGGAAGAGAGGGAGAGAGCCCACGTCGGGACTCTCCACCACCGGTaGCTGGAAGTCCCTGGTCAGGTACGAGTGTGGCTTGAGAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: REERERAHVGTLHHR*LEVPGQVRVWLERG Trigger: GCCTCTCTCAAGCCACACTCGTACCTGACCAGGGACTTCCAGGCACCGGTGGTGGAGAGTCCCGACGTGGGCTCTCTCCCTCTCTTCCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
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| 3UTR CCA 90 bp | TTTCACCCTGCCCTTCTGCTGTTACAGCTGCCGGCTAGCTGGGGGTaGGAGAATGGTATGTGTGGTCACCAGAGGGCACTGAGAGTGGGC | + |
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Preference number: 1 (lower is better) Translates to: FHPALLLLQLPASWG*ENGMCGHQRALRVG Trigger: GCCCACTCTCAGTGCCCTCTGGTGACCACACATACCATTCTCCCACCCCCAGCTAGCCGGCAGCTGTAACAGCAGAAGGGCAGGGTGAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
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| 3UTR CCA 90 bp | GGCTCATTTCACCCTGCCCTTCTGCTGTTACAGCTGCCGGCTAGCTaGGGGTGGGAGAATGGTATGTGTGGTCACCAGAGGGCACTGAGA | + |
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Preference number: 1 (lower is better) Translates to: GSFHPALLLLQLPAS*GWENGMCGHQRALR Trigger: TCTCAGTGCCCTCTGGTGACCACACATACCATTCTCCCACCCCCAGCTAGCCGGCAGCTGTAACAGCAGAAGGGCAGGGTGAAATGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
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| 3UTR GCA 90 bp | CCCCAACCTTTGGCTCATTTCACCCTGCCCTTCTGCTGTTACAGCTaGCGGCTAGCTGGGGGTGGGAGAATGGTATGTGTGGTCACCAGA | + |
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Preference number: 1 (lower is better) Translates to: PQPLAHFTLPFCCYS*RLAGGGRMVCVVTR Trigger: TCTGGTGACCACACATACCATTCTCCCACCCCCAGCTAGCCGGCAGCTGTAACAGCAGAAGGGCAGGGTGAAATGAGCCAAAGGTTGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
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| 3UTR GCA 90 bp | AGTCTGCTCTGCCCCCAACCTTTGGCTCATTTCACCCTGCCCTTCTaGTGTTACAGCTGCCGGCTAGCTGGGGGTGGGAGAATGGTATGT | + |
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Preference number: 1 (lower is better) Translates to: SLLCPQPLAHFTLPF*CYSCRLAGGGRMVC Trigger: ACATACCATTCTCCCACCCCCAGCTAGCCGGCAGCTGTAACAGCAGAAGGGCAGGGTGAAATGAGCCAAAGGTTGGGGGCAGAGCAGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
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| 3UTR CCA 90 bp | CAAGATGCTCTGATCCACTGGGAAGGAGTAGAAGGGTCCAGGCTGTaGGCACCATACACCTGCCAGGCTCAGAAACACTGGGCCAAGTCA | + |
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Preference number: 1 (lower is better) Translates to: QDALIHWEGVEGSRL*APYTCQAQKHWAKS Trigger: TGACTTGGCCCAGTGTTTCTGAGCCTGGCAGGTGTATGGTGCCCACAGCCTGGACCCTTCTACTCCTTCCCAGTGGATCAGAGCATCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
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| 3UTR TCA 90 bp | TACAAGCCTGGACAAGTCCGGGGGTGTGGCAGGAGCTCAGGTGACTaGCTGAGGGGGCAGAAGGAAATTCACATCCTCAGCATTAGTTCG | + |
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Preference number: 1 (lower is better) Translates to: YKPGQVRGCGRSSGD*LRGQKEIHILSISS Trigger: CGAACTAATGCTGAGGATGTGAATTTCCTTCTGCCCCCTCAGTCAGTCACCTGAGCTCCTGCCACACCCCCGGACTTGTCCAGGCTTGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
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| 3UTR TCA 90 bp | CTAGCTGGGGGTGGGAGAATGGTATGTGTGGTCACCAGAGGGCACTaGGAGTGGGCCTTAAAGGCATGTGAATCCTGGCAAAGACCTGAC | + |
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Preference number: 1 (lower is better) Translates to: LAGGGRMVCVVTRGH*EWALKACESWQRPD Trigger: GTCAGGTCTTTGCCAGGATTCACATGCCTTTAAGGCCCACTCTCAGTGCCCTCTGGTGACCACACATACCATTCTCCCACCCCCAGCTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
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| 3UTR TCA 90 bp | CCCCACACACATATACTGGGAGTGTTTGGGGGAGCTGTGTGGATATaGGCTGGGCTGCTGGCTTCTGGATCTTGCAACTGGCAAAGCAAC | + |
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Preference number: 1 (lower is better) Translates to: PHTHILGVFGGAVWI*AGLLASGSCNWQSN Trigger: GTTGCTTTGCCAGTTGCAAGATCCAGAAGCCAGCAGCCCAGCTCATATCCACACAGCTCCCCCAAACACTCCCAGTATATGTGTGTGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
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| 3UTR GCA 90 bp | TCCACCCAATGCTCTTTCTTTCCCTCCTCTGTCACCTACTCAGTCTaGTCTGCCCCCAACCTTTGGCTCATTTCACCCTGCCCTTCTGCT | + |
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Preference number: 1 (lower is better) Translates to: STQCSFFPSSVTYSV*SAPNLWLISPCPSA Trigger: AGCAGAAGGGCAGGGTGAAATGAGCCAAAGGTTGGGGGCAGAGCAGACTGAGTAGGTGACAGAGGAGGGAAAGAAAGAGCATTGGGTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
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| 3UTR CCA 90 bp | TGGATATTTCTAGCACCTTCCTGCAGCACCCCCACACACATATACTaGGAGTGTTTGGGGGAGCTGTGTGGATATGAGCTGGGCTGCTGG | + |
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Preference number: 1 (lower is better) Translates to: WIFLAPSCSTPTHIY*ECLGELCGYELGCW Trigger: CCAGCAGCCCAGCTCATATCCACACAGCTCCCCCAAACACTCCCAGTATATGTGTGTGGGGGTGCTGCAGGAAGGTGCTAGAAATATCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
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| 3UTR GCA 90 bp | CCAATGCTCTTTCTTTCCCTCCTCTGTCACCTACTCAGTCTGCTCTaGCCCCAACCTTTGGCTCATTTCACCCTGCCCTTCTGCTGTTAC | + |
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Preference number: 1 (lower is better) Translates to: PMLFLSLLCHLLSLL*PQPLAHFTLPFCCY Trigger: GTAACAGCAGAAGGGCAGGGTGAAATGAGCCAAAGGTTGGGGGCAGAGCAGACTGAGTAGGTGACAGAGGAGGGAAAGAAAGAGCATTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
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| 3UTR TCA 90 bp | GTTCAACGGTGGCACCCACCAAGTCTGCAGGTAGAGTACAGTCCTTaGTTTCGGGAGACGTGGAAGAAGGAAGAGAAACAGCTCTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: VQRWHPPSLQVEYSP*FRETWKKEEKQLSG Trigger: TCCAGAGAGCTGTTTCTCTTCCTTCTTCCACGTCTCCCGAAATCAAGGACTGTACTCTACCTGCAGACTTGGTGGGTGCCACCGTTGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
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| 3UTR CCA 90 bp | CACACATATACTGGGAGTGTTTGGGGGAGCTGTGTGGATATGAGCTaGGCTGCTGGCTTCTGGATCTTGCAACTGGCAAAGCAACAGCTT | + |
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Preference number: 1 (lower is better) Translates to: HTYTGSVWGSCVDMS*AAGFWILQLAKQQL Trigger: AAGCTGTTGCTTTGCCAGTTGCAAGATCCAGAAGCCAGCAGCCCAGCTCATATCCACACAGCTCCCCCAAACACTCCCAGTATATGTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
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| 3UTR CCA 90 bp | AGTGTTTGGGGGAGCTGTGTGGATATGAGCTGGGCTGCTGGCTTCTaGATCTTGCAACTGGCAAAGCAACAGCTTGAAGAAATAACACAC | + |
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Preference number: 1 (lower is better) Translates to: SVWGSCVDMSWAAGF*ILQLAKQQLEEITH Trigger: GTGTGTTATTTCTTCAAGCTGTTGCTTTGCCAGTTGCAAGATCCAGAAGCCAGCAGCCCAGCTCATATCCACACAGCTCCCCCAAACACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
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| 3UTR TCA 90 bp | GGAGACGTGGAAGAAGGAAGAGAAACAGCTCTCTGGAGACTCTGCTaGCAAATGAACAGAAAATTCATCCCTGCCACCCCTTGTGTTAAC | + |
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Preference number: 1 (lower is better) Translates to: GDVEEGRETALWRLC*QMNRKFIPATPCVN Trigger: GTTAACACAAGGGGTGGCAGGGATGAATTTTCTGTTCATTTGTCAGCAGAGTCTCCAGAGAGCTGTTTCTCTTCCTTCTTCCACGTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
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| 3UTR TCA 90 bp | AAAGTCTGGGTCACAGTGAATGGAGTTCCCACGGGTGTCTGTATCTaGGTCACTTATTGTGCTTTTTCAAACGTTCTCTTTGGAGTGGCA | + |
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Preference number: 1 (lower is better) Translates to: KVWVTVNGVPTGVCI*VTYCAFSNVLFGVA Trigger: TGCCACTCCAAAGAGAACGTTTGAAAAAGCACAATAAGTGACTCAGATACAGACACCCGTGGGAACTCCATTCACTGTGACCCAGACTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
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| 3UTR TCA 90 bp | CTGGGCTGCTGGCTTCTGGATCTTGCAACTGGCAAAGCAACAGCTTaGAGAAATAACACACAATTAACTTTGTGTTTCCCTTTAGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: LGCWLLDLATGKATA*RNNTQLTLCFPLVS Trigger: GGAGACTAAAGGGAAACACAAAGTTAATTGTGTGTTATTTCTTCAAGCTGTTGCTTTGCCAGTTGCAAGATCCAGAAGCCAGCAGCCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
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| 3UTR TCA 90 bp | GTCTCTTTCTCTCTTGCCTATGTAAATATAAGGGGGTGGGAGGATTaGTGTGTGAATCATGTTTCAACTTTATGGAAATTGTTCTGCTCT | + |
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Preference number: 1 (lower is better) Translates to: VSFSLAYVNIRGWED*CVNHVSTLWKLFCS Trigger: AGAGCAGAACAATTTCCATAAAGTTGAAACATGATTCACACATCAATCCTCCCACCCCCTTATATTTACATAGGCAAGAGAGAAAGAGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
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| 3UTR CCA 90 bp | TTAAGCATCATATATCTTAACGGTGTCATTGGTAATAATCTCATATaGATTTCCCAACTTCCCTATCTTCATGAAGACTGGGACTCTGTC | + |
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Preference number: 1 (lower is better) Translates to: LSIIYLNGVIGNNLI*ISQLPYLHEDWDSV Trigger: GACAGAGTCCCAGTCTTCATGAAGATAGGGAAGTTGGGAAATCCATATGAGATTATTACCAATGACACCGTTAAGATATATGATGCTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
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| 3UTR TCA 90 bp | AGAATGTCAGTTACAACATTATTTACAGTAAAGACTGGAAACAGGTaGACTCATCTGTGTTTGTGGATGGGTTACAAAATAAAGATCCAC | + |
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Preference number: 1 (lower is better) Translates to: RMSVTTLFTVKTGNR*THLCLWMGYKIKIH Trigger: GTGGATCTTTATTTTGTAACCCATCCACAAACACAGATGAGTTCACCTGTTTCCAGTCTTTACTGTAAATAATGTTGTAACTGACATTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
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| 3UTR CAA 90 bp | CTTTCCCTCCTCTGTCACCTACTCAGTCTGCTCTGCCCCCAACCTTaGGCTCATTTCACCCTGCCCTTCTGCTGTTACAGCTGCCGGCTA | + |
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Preference number: 2 (lower is better) Translates to: LSLLCHLLSLLCPQP*AHFTLPFCCYSCRL Trigger: TAGCCGGCAGCTGTAACAGCAGAAGGGCAGGGTGAAATGAGCCAAAGGTTGGGGGCAGAGCAGACTGAGTAGGTGACAGAGGAGGGAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
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| 3UTR CAA 90 bp | CTAGCACCTTCCTGCAGCACCCCCACACACATATACTGGGAGTGTTaGGGGGAGCTGTGTGGATATGAGCTGGGCTGCTGGCTTCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: LAPSCSTPTHIYWEC*GELCGYELGCWLLD Trigger: ATCCAGAAGCCAGCAGCCCAGCTCATATCCACACAGCTCCCCCAAACACTCCCAGTATATGTGTGTGGGGGTGCTGCAGGAAGGTGCTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCAAGTCCTGGGGCAGTTTCTACAATCCCAGCCCACTCCACTAAGCACAGAGGTCACCAGAGGGCACTaGGAGTGGGCCTTAAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: SQVLGQFLQSQPTPLSTEVTRGH*EWALKA Trigger: TGCCTTTAAGGCCCACTCTCAGTGCCCTCTGGTGAC...CTCTGTGCTTAGTGGAGTGGGCTGGGATTGTAGAAACTGCCCCAGGACTTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
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| 3UTR-3UTR GCA 90 bp | GAGACCAGGCGGGGACCCGATTGGTTTAAGGCAGGAGAGTCAGTCTGCAGTCGACTACTCAGTCTGCTCTaGCCCCAACCTTTGGCTCAT | + |
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Preference number: 2 (lower is better) Translates to: ETRRGPDWFKAGESVCSRLLSLL*PQPLAH Trigger: ATGAGCCAAAGGTTGGGGGCAGAGCAGACTGAGTAG...TCGACTGCAGACTGACTCTCCTGCCTTAAACCAATCGGGTCCCCGCCTGGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCAAGTCCTGGGGCAGTTTCTACAATCCCAGCCCACTCCACTAAGCACAGAGCCGGCTAGCTGGGGGTaGGAGAATGGTATGTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: SQVLGQFLQSQPTPLSTEPASWG*ENGMCG Trigger: ACCACACATACCATTCTCCCACCCCCAGCTAGCCGG...CTCTGTGCTTAGTGGAGTGGGCTGGGATTGTAGAAACTGCCCCAGGACTTGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCTATATTGCACTATGGTGGGGGACCAGTGAGCCCTCGGGACATGTTTCACAGCTGCCGGCTAGCTaGGGGTGGGAGAATGGTATG | + |
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Preference number: 2 (lower is better) Translates to: LSYIALWWGTSEPSGHVSQLPAS*GWENGM Trigger: CATACCATTCTCCCACCCCCAGCTAGCCGGCAGCTG...TGAAACATGTCCCGAGGGCTCACTGGTCCCCCACCATAGTGCAATATAGGACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
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| 3UTR-3UTR TCA 90 bp | CCTATATTGCACTATGGTGGGGGACCAGTGAGCCCTCGGGACATGTTTCAATGTGTAGGTCACTCTGCCTaGGGGACAAGGAGGGAACAG | + |
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Preference number: 2 (lower is better) Translates to: PILHYGGGPVSPRDMFQCVGHSA*GTRREQ Trigger: CTGTTCCCTCCTTGTCCCTCAGGCAGAGTGACCTAC...ACATTGAAACATGTCCCGAGGGCTCACTGGTCCCCCACCATAGTGCAATATAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
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| 3UTR CAA 90 bp | ACTCCACTAAGCACAGAGGCTGTGGCCAACCTGATGTATATAGTCTaGGTCGGAAGCTGTAGGTCACTCTGCCTGAGGGACAAGGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: TPLSTEAVANLMYIV*VGSCRSLCLRDKEG Trigger: TCCCTCCTTGTCCCTCAGGCAGAGTGACCTACAGCTTCCGACCAAGACTATATACATCAGGTTGGCCACAGCCTCTGTGCTTAGTGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCTATATTGCACTATGGTGGGGGACCAGTGAGCCCTCGGGACATGTTTCAGGAGAATGGTATGTGTaGTCACCAGAGGGCACTGAG | + |
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Preference number: 2 (lower is better) Translates to: LSYIALWWGTSEPSGHVSGEWYV*SPEGTE Trigger: CTCAGTGCCCTCTGGTGACCACACATACCATTCTCC...TGAAACATGTCCCGAGGGCTCACTGGTCCCCCACCATAGTGCAATATAGGACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGTCAGTAGCCAGAGCTCTGGAACCAGTCAGATCTGGTTCAGTCCTAGCCATCCGGCTAGCTGGGGGTaGGAGAATGGTATGTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: IVSSQSSGTSQIWFSPSHPASWG*ENGMCG Trigger: ACCACACATACCATTCTCCCACCCCCAGCTAGCCGG...ATGGCTAGGACTGAACCAGATCTGACTGGTTCCAGAGCTCTGGCTACTGACTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
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| 3UTR CAA 90 bp | AGTTCAACGGTGGCACCCACCAAGTCTGCAGGTAGAGTACAGTCCTaGATTTCGGGAGACGTGGAAGAAGGAAGAGAAACAGCTCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: SSTVAPTKSAGRVQS*ISGDVEEGRETALW Trigger: CCAGAGAGCTGTTTCTCTTCCTTCTTCCACGTCTCCCGAAATCAAGGACTGTACTCTACCTGCAGACTTGGTGGGTGCCACCGTTGAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
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| 3UTR-3UTR TCA 90 bp | ATATTGCACTATGGTGGGGGACCAGTGAGCCCTCGGGACATGTTTCAATGTGGCTGGGGAGCAACAGAATaGGCAACAGGAGAAGTACAG | + |
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Preference number: 2 (lower is better) Translates to: ILHYGGGPVSPRDMFQCGWGATE*ATGEVQ Trigger: CTGTACTTCTCCTGTTGCTCATTCTGTTGCTCCCCA...GCCACATTGAAACATGTCCCGAGGGCTCACTGGTCCCCCACCATAGTGCAATAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCCTATATTGCACTATGGTGGGGGACCAGTGAGCCCTCGGGACATGTTTCAACTACTCAGTCTGCTCTaGCCCCAACCTTTGGCTCAT | + |
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Preference number: 2 (lower is better) Translates to: CPILHYGGGPVSPRDMFQLLSLL*PQPLAH Trigger: ATGAGCCAAAGGTTGGGGGCAGAGCAGACTGAGTAG...TTGAAACATGTCCCGAGGGCTCACTGGTCCCCCACCATAGTGCAATATAGGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
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| 3UTR-3UTR CCA 90 bp | ATATTGCACTATGGTGGGGGACCAGTGAGCCCTCGGGACATGTTTCAATGTGGCCACAAAGCCAAGTCCTaGGGCAGTTTCTACAATCCC | + |
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Preference number: 2 (lower is better) Translates to: ILHYGGGPVSPRDMFQCGHKAKS*GSFYNP Trigger: GGGATTGTAGAAACTGCCCCAGGACTTGGCTTTGTG...GCCACATTGAAACATGTCCCGAGGGCTCACTGGTCCCCCACCATAGTGCAATAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
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| 3UTR CAA 90 bp | CTCACGAAGGTCCAAGACCGCCTCTCACCTTCTTACAGACAAGAGTaGGGGAGCAACAGAATGAGCAACAGGAGAAGTACAGGAAGAACC | + |
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Preference number: 2 (lower is better) Translates to: LTKVQDRLSPSYRQE*GSNRMSNRRSTGRT Trigger: GGTTCTTCCTGTACTTCTCCTGTTGCTCATTCTGTTGCTCCCCAACTCTTGTCTGTAAGAAGGTGAGAGGCGGTCTTGGACCTTCGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
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| 3UTR-3UTR GCA 90 bp | GGGACCAGTGAGCCCTCGGGACATGTTTCAATGTGGCATAGCATAAAAAGCATAAGCTGTAGGTCACTCTaGCTGAGGGACAAGGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: GTSEPSGHVSMWHSIKSISCRSL*LRDKEG Trigger: TCCCTCCTTGTCCCTCAGGCAGAGTGACCTACAGCT...TATGCTTTTTATGCTATGCCACATTGAAACATGTCCCGAGGGCTCACTGGTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCGCTTCTTACGTTCATCACAGTCTCCTCAAGATGCTCTGATCCACTGGGAACAGGCTCAGAAACACTaGGCCAAGTCAAAGCCACAG | + |
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Preference number: 2 (lower is better) Translates to: QRFLRSSQSPQDALIHWEQAQKH*AKSKPQ Trigger: CTGTGGCTTTGACTTGGCCCAGTGTTTCTGAGCCTG...TTCCCAGTGGATCAGAGCATCTTGAGGAGACTGTGATGAACGTAAGAAGCGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
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| 3UTR CAA 90 bp | GCCAGGGCTGAGAGGAGTCTGGGGTTGGGGTTAGGAGAAGCCATTTaGGAGGAAGAAGACAGAATATGTTCTAAAGTCAGGGAAAGTGGT | + |
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Preference number: 2 (lower is better) Translates to: ARAERSLGLGLGEAI*EEEDRICSKVRESG Trigger: ACCACTTTCCCTGACTTTAGAACATATTCTGTCTTCTTCCTCCAAAATGGCTTCTCCTAACCCCAACCCCAGACTCCTCTCAGCCCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCTATATTGCACTATGGTGGGGGACCAGTGAGCCCTCGGGACATGTTTCAGACCTGACCTCACAGTaGGAGAAAACAAAGTACAAG | + |
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Preference number: 2 (lower is better) Translates to: LSYIALWWGTSEPSGHVSDLTSQ*EKTKYK Trigger: CTTGTACTTTGTTTTCTCCCACTGTGAGGTCAGGTC...TGAAACATGTCCCGAGGGCTCACTGGTCCCCCACCATAGTGCAATATAGGACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
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| 3UTR-3UTR GCA 90 bp | GTTTCAATGTGGCATAGCATAAAAAGCATATGTGTCAGGAGACCAGGCGGGGACCCTCAGTCCACCCAATaGTCTTTCTTTCCCTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: VSMWHSIKSICVRRPGGDPQSTQ*SFFPSS Trigger: AGAGGAGGGAAAGAAAGAGCATTGGGTGGACTGAGG...GTCCCCGCCTGGTCTCCTGACACATATGCTTTTTATGCTATGCCACATTGAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGCAGGTAGAGTACAGTCCTTGATTTCGGGAGACGTGGAAGAAGGAAGAGAACCATTCCTAATGCATTaGAGAGCAAAGGAGGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: SAGRVQSLISGDVEEGREPFLMH*RAKEVP Trigger: AGGCACCTCCTTTGCTCTTCAATGCATTAGGAATGG...TTCTCTTCCTTCTTCCACGTCTCCCGAAATCAAGGACTGTACTCTACCTGCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
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| 3UTR-3UTR CCA 90 bp | ATTGGTTTAAGGCAGGAGAGTCAGTCTGCAGTCGAAATGTACCCATTTGACAAATCTGCCCCCAACCTTTaGCTCATTTCACCCTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: IGLRQESQSAVEMYPFDKSAPNL*LISPCP Trigger: AGGGCAGGGTGAAATGAGCCAAAGGTTGGGGGCAGA...TTTGTCAAATGGGTACATTTCGACTGCAGACTGACTCTCCTGCCTTAAACCAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
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| 3UTR-3UTR CCA 90 bp | ATTGGTTTAAGGCAGGAGAGTCAGTCTGCAGTCGAAATGTACCCATTTGACAAAGATGCTCTGATCCACTaGGAAGGAGTAGAAGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: IGLRQESQSAVEMYPFDKDALIH*EGVEGS Trigger: GGACCCTTCTACTCCTTCCCAGTGGATCAGAGCATC...TTTGTCAAATGGGTACATTTCGACTGCAGACTGACTCTCCTGCCTTAAACCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTGCTGTGGGCACACAGGGAAGAAGAGTTACTTTCAACTACAGAGTTTGTATGGAGAATGGTATGTGTaGTCACCAGAGGGCACTGAG | + |
|
Preference number: 2 (lower is better) Translates to: LCCGHTGKKSYFQLQSLYGEWYV*SPEGTE Trigger: CTCAGTGCCCTCTGGTGACCACACATACCATTCTCC...ATACAAACTCTGTAGTTGAAAGTAACTCTTCTTCCCTGTGTGCCCACAGCAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
||
| 3UTR-3UTR GCA 90 bp | GAACAGTGTCTGGGTATAAACTCTCTACAGGGTATTGGCAACATGTATCAAAATTGGGCACCATACACCTaGCAGGCTCAGAAACACTGG | + |
|
Preference number: 2 (lower is better) Translates to: EQCLGINSLQGIGNMYQNWAPYT*QAQKHW Trigger: CCAGTGTTTCTGAGCCTGGCAGGTGTATGGTGCCCA...ATTTTGATACATGTTGCCAATACCCTGTAGAGAGTTTATACCCAGACACTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTTGCTGTGGGCACACAGGGAAGAAGAGTTACTTTCAACTACAGAGTTTGTATCCTCAGTCCACCCAATaGTCTTTCTTTCCCTCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: LCCGHTGKKSYFQLQSLYPQSTQ*SFFPSS Trigger: AGAGGAGGGAAAGAAAGAGCATTGGGTGGACTGAGG...ATACAAACTCTGTAGTTGAAAGTAACTCTTCTTCCCTGTGTGCCCACAGCAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
||
| 3UTR-3UTR GCA 90 bp | GTAATAATCTCATATGGATTTCCCAACTTCCCTATCTTCATGAAGACTGGGACTAGCTGTAGGTCACTCTaGCTGAGGGACAAGGAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: VIISYGFPNFPIFMKTGTSCRSL*LRDKEG Trigger: TCCCTCCTTGTCCCTCAGGCAGAGTGACCTACAGCT...AGTCCCAGTCTTCATGAAGATAGGGAAGTTGGGAAATCCATATGAGATTATTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTTGCTGTGGGCACACAGGGAAGAAGAGTTACTTTCAACTACAGAGTTTGTATCAGGGAAAGTGGTCCTaGGATGGCTTTTTCCTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: LCCGHTGKKSYFQLQSLYQGKWS*DGFFLF Trigger: GAAAAGGAAAAAGCCATCCCAGGACCACTTTCCCTG...ATACAAACTCTGTAGTTGAAAGTAACTCTTCTTCCCTGTGTGCCCACAGCAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
||
| 3UTR CAA 90 bp | CACAGTGAATGGAGTTCCCACGGGTGTCTGTATCTGAGTCACTTATaGTGCTTTTTCAAACGTTCTCTTTGGAGTGGCAATGGTTTTATT | + |
|
Preference number: 2 (lower is better) Translates to: HSEWSSHGCLYLSHL*CFFKRSLWSGNGFI Trigger: AATAAAACCATTGCCACTCCAAAGAGAACGTTTGAAAAAGCACAATAAGTGACTCAGATACAGACACCCGTGGGAACTCCATTCACTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
||
| 3UTR GCA 72 bp | AGGGAGAGAGCCCACGTCGGGACTCTCCACCACCGGTaGCTGGAAGTCCCTGGTCAGGTACGAGTGTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: RERAHVGTLHHR*LEVPGQVRVWL Trigger: AAGCCACACTCGTACCTGACCAGGGACTTCCAGGCACCGGTGGTGGAGAGTCCCGACGTGGGCTCTCTCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| 3UTR GCA 72 bp | TGCCCCCAACCTTTGGCTCATTTCACCCTGCCCTTCTaGTGTTACAGCTGCCGGCTAGCTGGGGGTGGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: CPQPLAHFTLPF*CYSCRLAGGGR Trigger: TCTCCCACCCCCAGCTAGCCGGCAGCTGTAACAGCAGAAGGGCAGGGTGAAATGAGCCAAAGGTTGGGGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| 3UTR CCA 72 bp | GCCCTTCTGCTGTTACAGCTGCCGGCTAGCTGGGGGTaGGAGAATGGTATGTGTGGTCACCAGAGGGCACTG | + |
|
Preference number: 3 (lower is better) Translates to: ALLLLQLPASWG*ENGMCGHQRAL Trigger: CAGTGCCCTCTGGTGACCACACATACCATTCTCCCACCCCCAGCTAGCCGGCAGCTGTAACAGCAGAAGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| 3UTR TCA 72 bp | GGACAAGTCCGGGGGTGTGGCAGGAGCTCAGGTGACTaGCTGAGGGGGCAGAAGGAAATTCACATCCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: GQVRGCGRSSGD*LRGQKEIHILS Trigger: GCTGAGGATGTGAATTTCCTTCTGCCCCCTCAGTCAGTCACCTGAGCTCCTGCCACACCCCCGGACTTGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| 3UTR CCA 72 bp | CCTGCAGCACCCCCACACACATATACTGGGAGTGTTTaGGGGAGCTGTGTGGATATGAGCTGGGCTGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: PAAPPHTYTGSV*GSCVDMSWAAG Trigger: GCCAGCAGCCCAGCTCATATCCACACAGCTCCCCCAAACACTCCCAGTATATGTGTGTGGGGGTGCTGCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
||
| 3UTR TCA 72 bp | CTTATGACCTCTGAGCTTAGGGATGGCACTGAGGGCTaGGGGGATGGGTGCAGGCATATGCCAGGGCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LMTSELRDGTEG*GDGCRHMPGLR Trigger: TCTCAGCCCTGGCATATGCCTGCACCCATCCCCTCAGCCCTCAGTGCCATCCCTAAGCTCAGAGGTCATAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
||
| 3UTR GCA 72 bp | TTGGCTCATTTCACCCTGCCCTTCTGCTGTTACAGCTaGCGGCTAGCTGGGGGTGGGAGAATGGTATGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LAHFTLPFCCYS*RLAGGGRMVCV Trigger: CACACATACCATTCTCCCACCCCCAGCTAGCCGGCAGCTGTAACAGCAGAAGGGCAGGGTGAAATGAGCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| 3UTR CCA 72 bp | CGTTCATCACAGTCTCCTCAAGATGCTCTGATCCACTaGGAAGGAGTAGAAGGGTCCAGGCTGTGGGCACCA | + |
|
Preference number: 3 (lower is better) Translates to: RSSQSPQDALIH*EGVEGSRLWAP Trigger: TGGTGCCCACAGCCTGGACCCTTCTACTCCTTCCCAGTGGATCAGAGCATCTTGAGGAGACTGTGATGAACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| 3UTR TCA 72 bp | CCCGGTCCACAAGACTTCCCTAGCTGTCCCATTTGCTaGCCTACTAGAGAAAAGGACAAGTCCACGTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PGPQDFPSCPIC*PTREKDKSTSG Trigger: CCCAGACGTGGACTTGTCCTTTTCTCTAGTAGGTCAGCAAATGGGACAGCTAGGGAAGTCTTGTGGACCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| 3UTR TCA 72 bp | GGTGGGAGAATGGTATGTGTGGTCACCAGAGGGCACTaGGAGTGGGCCTTAAAGGCATGTGAATCCTGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GGRMVCVVTRGH*EWALKACESWQ Trigger: TTGCCAGGATTCACATGCCTTTAAGGCCCACTCTCAGTGCCCTCTGGTGACCACACATACCATTCTCCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| 3UTR GCA 72 bp | GAGTGTTTGGGGGAGCTGTGTGGATATGAGCTGGGCTaGTGGCTTCTGGATCTTGCAACTGGCAAAGCAACA | + |
|
Preference number: 3 (lower is better) Translates to: ECLGELCGYELG*WLLDLATGKAT Trigger: TGTTGCTTTGCCAGTTGCAAGATCCAGAAGCCAGCAGCCCAGCTCATATCCACACAGCTCCCCCAAACACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
||
| 3UTR GCA 72 bp | CCAGCGCTTCTTACGTTCATCACAGTCTCCTCAAGATaGTCTGATCCACTGGGAAGGAGTAGAAGGGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PALLTFITVSSR*SDPLGRSRRVQ Trigger: CTGGACCCTTCTACTCCTTCCCAGTGGATCAGAGCATCTTGAGGAGACTGTGATGAACGTAAGAAGCGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| 3UTR CCA 72 bp | TGCCTGAGGGACAAGGAGGGAACAGAAATAAGGGAGTaGACTGTCTCCACGGGAAATGACAGGAATGGATGC | + |
|
Preference number: 3 (lower is better) Translates to: CLRDKEGTEIRE*TVSTGNDRNGC Trigger: GCATCCATTCCTGTCATTTCCCGTGGAGACAGTCCACTCCCTTATTTCTGTTCCCTCCTTGTCCCTCAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| 3UTR CCA 72 bp | AAGCATATGTGTCAGGAGACCAGGCGGGGACCCGATTaGTTTAAGGCAGGAGAGTCAGTCTGCAGTCGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: KHMCQETRRGPD*FKAGESVCSRN Trigger: ATTTCGACTGCAGACTGACTCTCCTGCCTTAAACCAATCGGGTCCCCGCCTGGTCTCCTGACACATATGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| 3UTR TCA 72 bp | TGGCACCCACCAAGTCTGCAGGTAGAGTACAGTCCTTaGTTTCGGGAGACGTGGAAGAAGGAAGAGAAACAG | + |
|
Preference number: 3 (lower is better) Translates to: WHPPSLQVEYSP*FRETWKKEEKQ Trigger: CTGTTTCTCTTCCTTCTTCCACGTCTCCCGAAATCAAGGACTGTACTCTACCTGCAGACTTGGTGGGTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
||
| 3UTR CCA 72 bp | ATAGTCAGTAGCCAGAGCTCTGGAACCAGTCAGATCTaGTTCAGTCCTAGCCATATCCTGCAAGGCCATGTG | + |
|
Preference number: 3 (lower is better) Translates to: IVSSQSSGTSQI*FSPSHILQGHV Trigger: CACATGGCCTTGCAGGATATGGCTAGGACTGAACCAGATCTGACTGGTTCCAGAGCTCTGGCTACTGACTAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
||
| 3UTR CCA 72 bp | TTCCTTTTCTTCTTCTCCAGAGCCATGGTGGGACTCTaGATATTTCTAGCACCTTCCTGCAGCACCCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: FLFFFSRAMVGL*IFLAPSCSTPT Trigger: TGTGGGGGTGCTGCAGGAAGGTGCTAGAAATATCCAGAGTCCCACCATGGCTCTGGAGAAGAAGAAAAGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
||
| 3UTR TCA 72 bp | TATACTTGGGATCCTTTCTCACTGCTGGCCATTCAGTaGGGAAGGCCAGGTGGATTGTTCAGATTCATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: YTWDPFSLLAIQ*GRPGGLFRFML Trigger: CAGCATGAATCTGAACAATCCACCTGGCCTTCCTCACTGAATGGCCAGCAGTGAGAAAGGATCCCAAGTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
||
| 3UTR CCA 72 bp | TTTCTCACTGCTGGCCATTCAGTGAGGAAGGCCAGGTaGATTGTTCAGATTCATGCTGATCCATCAGCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: FLTAGHSVRKAR*IVQIHADPSAN Trigger: ATTTGCTGATGGATCAGCATGAATCTGAACAATCCACCTGGCCTTCCTCACTGAATGGCCAGCAGTGAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
||
| 3UTR GCA 72 bp | AGTTCCCACGGGTGTCTGTATCTGAGTCACTTATTGTaGTTTTTCAAACGTTCTCTTTGGAGTGGCAATGGT | + |
|
Preference number: 3 (lower is better) Translates to: SSHGCLYLSHLL*FFKRSLWSGNG Trigger: ACCATTGCCACTCCAAAGAGAACGTTTGAAAAAGCACAATAAGTGACTCAGATACAGACACCCGTGGGAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
||
| 3UTR TCA 72 bp | GTCACAGTGAATGGAGTTCCCACGGGTGTCTGTATCTaGGTCACTTATTGTGCTTTTTCAAACGTTCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: VTVNGVPTGVCI*VTYCAFSNVLF Trigger: AAAGAGAACGTTTGAAAAAGCACAATAAGTGACTCAGATACAGACACCCGTGGGAACTCCATTCACTGTGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
||
| 3UTR CCA 72 bp | TCACTTATTGTGCTTTTTCAAACGTTCTCTTTGGAGTaGCAATGGTTTTATTCCTATGACTATAGCCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SLIVLFQTFSLE*QWFYSYDYSPS Trigger: GGAAGGGCTATAGTCATAGGAATAAAACCATTGCCACTCCAAAGAGAACGTTTGAAAAAGCACAATAAGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
||
| 3UTR CCA 72 bp | CTGAGTCACTTATTGTGCTTTTTCAAACGTTCTCTTTaGAGTGGCAATGGTTTTATTCCTATGACTATAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LSHLLCFFKRSL*SGNGFIPMTIA Trigger: GGCTATAGTCATAGGAATAAAACCATTGCCACTCCAAAGAGAACGTTTGAAAAAGCACAATAAGTGACTCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
||
| 3UTR TCA 72 bp | TCTCTTGCCTATGTAAATATAAGGGGGTGGGAGGATTaGTGTGTGAATCATGTTTCAACTTTATGGAAATTG | + |
|
Preference number: 3 (lower is better) Translates to: SLAYVNIRGWED*CVNHVSTLWKL Trigger: CAATTTCCATAAAGTTGAAACATGATTCACACATCAATCCTCCCACCCCCTTATATTTACATAGGCAAGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
||
| 3UTR CCA 72 bp | ATATATCTTAACGGTGTCATTGGTAATAATCTCATATaGATTTCCCAACTTCCCTATCTTCATGAAGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: IYLNGVIGNNLI*ISQLPYLHEDW Trigger: CCAGTCTTCATGAAGATAGGGAAGTTGGGAAATCCATATGAGATTATTACCAATGACACCGTTAAGATATAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR TCA 90 bp | ACGTCGGGACTCTCCACCACCGGTGCCTGGAAGTCCCTGGTCAGGTACGAGTGTGCGCCCCTTGGCTCTTaGACTCGTGTGCGCGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSGLSTTGAWKSLVRYECAPLGS*TRVRAG Trigger: TCCGGCGCGCACACGAGTTCAAGAGCCAAGGGGCGC...ACACTCGTACCTGACCAGGGACTTCCAGGCACCGGTGGTGGAGAGTCCCGACGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR TCA 90 bp | AGGGAGAGAGCCCACGTCGGGACTCTCCACCACCGGTGCCTGGAAGTCCCTGGTCTTGCTCTGCTCCTCTaGGAGGCGGCTGGATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RERAHVGTLHHRCLEVPGLALLL*EAAGFG Trigger: CCCAAATCCAGCCGCCTCTCAGAGGAGCAGAGCAAG...ACCAGGGACTTCCAGGCACCGGTGGTGGAGAGTCCCGACGTGGGCTCTCTCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR CCA 90 bp | GCCCCCAACCTTTGGCTCATTTCACCCTGCCCTTCTGCTGTTACAGCTGCCGGCAGAGGCGGCTGGATTTaGGAACCCCTGCCGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: APNLWLISPCPSAVTAAGRGGWI*EPLPRR Trigger: CCTCCTCGGCAGGGGTTCCCAAATCCAGCCGCCTCT...GCCGGCAGCTGTAACAGCAGAAGGGCAGGGTGAAATGAGCCAAAGGTTGGGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGTTACAGCTGCCGGCTAGCTGGGGGTGGGAGAATGGTATGTGTGGTCACCCTTGCTCTGCTCCTCTaGGAGGCGGCTGGATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CCYSCRLAGGGRMVCVVTLALLL*EAAGFG Trigger: CCCAAATCCAGCCGCCTCTCAGAGGAGCAGAGCAAG...GGTGACCACACATACCATTCTCCCACCCCCAGCTAGCCGGCAGCTGTAACAGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR TCA 90 bp | CCAAGACCGCCTCTCACCTTCTTACAGACAAGAGTTGGGGAGCAACAGAATGAGGCGCCCCTTGGCTCTTaGACTCGTGTGCGCGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PRPPLTFLQTRVGEQQNEAPLGS*TRVRAG Trigger: TCCGGCGCGCACACGAGTTCAAGAGCCAAGGGGCGC...CTCATTCTGTTGCTCCCCAACTCTTGTCTGTAAGAAGGTGAGAGGCGGTCTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR GCA 90 bp | GCCAGGCTCAGAAACACTGGGCCAAGTCAAAGCCACAGAACCATCCCCGGTCCATCAACCGTCTTGCTCTaGTCCTCTGAGAGGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ARLRNTGPSQSHRTIPGPSTVLL*SSERRL Trigger: CAGCCGCCTCTCAGAGGAGCAGAGCAAGACGGTTGA...TGGACCGGGGATGGTTCTGTGGCTTTGACTTGGCCCAGTGTTTCTGAGCCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR CCA 90 bp | ACGTCGGGACTCTCCACCACCGGTGCCTGGAAGTCCCTGGTCAGGTACGAGTGTTGTACCGAATCACATTaGTGTCTGTGGGTTGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TSGLSTTGAWKSLVRYECCTESH*CLWVVG Trigger: CCCGACAACCCACAGACACCAATGTGATTCGGTACA...ACACTCGTACCTGACCAGGGACTTCCAGGCACCGGTGGTGGAGAGTCCCGACGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| 3UTR CAA 72 bp | TCCTGCAGCACCCCCACACACATATACTGGGAGTGTTaGGGGGAGCTGTGTGGATATGAGCTGGGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SCSTPTHIYWEC*GELCGYELGCW Trigger: CCAGCAGCCCAGCTCATATCCACACAGCTCCCCCAAACACTCCCAGTATATGTGTGTGGGGGTGCTGCAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
||
| CDS-3UTR GCA 90 bp | AGCCAAGTCCTGGGGCAGTTTCTACAATCCCAGCCCACTCCACTAAGCACAGAGACGCCCGGTGGTATTTaGCGATGGCTTCGCGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: SQVLGQFLQSQPTPLSTETPGGI*RWLRGI Trigger: AATTCCGCGAAGCCATCGGCAAATACCACCGGGCGT...CTCTGTGCTTAGTGGAGTGGGCTGGGATTGTAGAAACTGCCCCAGGACTTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR GCA 90 bp | CTGAGGGGGCAGAAGGAAATTCACATCCTCAGCATTAGTTCGCCCAGCGCTTCTTCAACCGTCTTGCTCTaGTCCTCTGAGAGGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRGQKEIHILSISSPSASSTVLL*SSERRL Trigger: CAGCCGCCTCTCAGAGGAGCAGAGCAAGACGGTTGA...AGAAGCGCTGGGCGAACTAATGCTGAGGATGTGAATTTCCTTCTGCCCCCTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR CCA 90 bp | GCCCCCAACCTTTGGCTCATTTCACCCTGCCCTTCTGCTGTTACAGCTGCCGGCGGTGGTATTTGCCGATaGCTTCGCGGAATTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: APNLWLISPCPSAVTAAGGGICR*LRGISC Trigger: ACAAGAAATTCCGCGAAGCCATCGGCAAATACCACC...GCCGGCAGCTGTAACAGCAGAAGGGCAGGGTGAAATGAGCCAAAGGTTGGGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR GCA 90 bp | CTGTCCTATATTGCACTATGGTGGGGGACCAGTGAGCCCTCGGGACATGTTTCAACGCCCGGTGGTATTTaGCGATGGCTTCGCGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: LSYIALWWGTSEPSGHVSTPGGI*RWLRGI Trigger: AATTCCGCGAAGCCATCGGCAAATACCACCGGGCGT...TGAAACATGTCCCGAGGGCTCACTGGTCCCCCACCATAGTGCAATATAGGACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGGCTCAGAAACACTGGGCCAAGTCAAAGCCACAGAACCATCCCCGGTCCAGCTTCTTTCTCCCTTTaGGAACATCTGCTGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ARLRNTGPSQSHRTIPGPASFSL*EHLLSF Trigger: GAAGCTCAGCAGATGTTCCCAAAGGGAGAAAGAAGC...TGGACCGGGGATGGTTCTGTGGCTTTGACTTGGCCCAGTGTTTCTGAGCCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR CCA 90 bp | GAGTGGCAATGGTTTTATTCCTATGACTATAGCCCTTCCCCCGACACATTCATCAGAGGCGGCTGGATTTaGGAACCCCTGCCGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EWQWFYSYDYSPSPDTFIRGGWI*EPLPRR Trigger: CCTCCTCGGCAGGGGTTCCCAAATCCAGCCGCCTCT...GATGAATGTGTCGGGGGAAGGGCTATAGTCATAGGAATAAAACCATTGCCACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
||
| 3UTR CAA 72 bp | GTGGCACCCACCAAGTCTGCAGGTAGAGTACAGTCCTaGATTTCGGGAGACGTGGAAGAAGGAAGAGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: VAPTKSAGRVQS*ISGDVEEGRET Trigger: TGTTTCTCTTCCTTCTTCCACGTCTCCCGAAATCAAGGACTGTACTCTACCTGCAGACTTGGTGGGTGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
||
| CDS-3UTR CCA 90 bp | TGTCCTATATTGCACTATGGTGGGGGACCAGTGAGCCCTCGGGACATGTTTCAAGCTTCTTTCTCCCTTTaGGAACATCTGCTGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CPILHYGGGPVSPRDMFQASFSL*EHLLSF Trigger: GAAGCTCAGCAGATGTTCCCAAAGGGAGAAAGAAGC...TTGAAACATGTCCCGAGGGCTCACTGGTCCCCCACCATAGTGCAATATAGGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGCAAAGACCTGACCTCACAGTGGGAGAAAACAAAGTACAAGCCTGGACAAGGTGGTATTTGCCGATaGCTTCGCGGAATTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PGKDLTSQWEKTKYKPGQGGICR*LRGISC Trigger: ACAAGAAATTCCGCGAAGCCATCGGCAAATACCACC...TTGTCCAGGCTTGTACTTTGTTTTCTCCCACTGTGAGGTCAGGTCTTTGCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR CCA 90 bp | GTTTCAATGTGGCATAGCATAAAAAGCATATGTGTCAGGAGACCAGGCGGGGACTGTACCGAATCACATTaGTGTCTGTGGGTTGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSMWHSIKSICVRRPGGDCTESH*CLWVVG Trigger: CCCGACAACCCACAGACACCAATGTGATTCGGTACA...GTCCCCGCCTGGTCTCCTGACACATATGCTTTTTATGCTATGCCACATTGAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTACGTTCATCACAGTCTCCTCAAGATGCTCTGATCCACTGGGAAGGAGTATCACATTGGTGTCTGTaGGTTGTCGGGTCCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FLRSSQSPQDALIHWEGVSHWCL*VVGSLL Trigger: AAGCAAGGACCCGACAACCCACAGACACCAATGTGA...TACTCCTTCCCAGTGGATCAGAGCATCTTGAGGAGACTGTGATGAACGTAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR CCA 90 bp | ATAGTCAGTAGCCAGAGCTCTGGAACCAGTCAGATCTGGTTCAGTCCTAGCCATTTCATCTCCGTCAGCTaGATGTACCGAATCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: IVSSQSSGTSQIWFSPSHFISVS*MYRITL Trigger: CAATGTGATTCGGTACATCCAGCTGACGGAGATGAA...ATGGCTAGGACTGAACCAGATCTGACTGGTTCCAGAGCTCTGGCTACTGACTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
||
| CDS-3UTR CCA 90 bp | GGGACCAGTGAGCCCTCGGGACATGTTTCAATGTGGCATAGCATAAAAAGCATATTCATCTCCGTCAGCTaGATGTACCGAATCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: GTSEPSGHVSMWHSIKSIFISVS*MYRITL Trigger: CAATGTGATTCGGTACATCCAGCTGACGGAGATGAA...TATGCTTTTTATGCTATGCCACATTGAAACATGTCCCGAGGGCTCACTGGTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR TCA 90 bp | AGGCAGGAGAGTCAGTCTGCAGTCGAAATGTACCCATTTGACAAAAATTCTTTATTTGGGAACATCTGCTaGGCTTCATCTCCGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RQESQSAVEMYPFDKNSLFGNIC*ASSPSA Trigger: AGCTGACGGAGATGAAGCTCAGCAGATGTTCCCAAA...TAAAGAATTTTTGTCAAATGGGTACATTTCGACTGCAGACTGACTCTCCTGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| 3UTR CAA 72 bp | CCACTGGAAATTCGTACCAAAACCATTCCTAATGCATaGAAGAGCAAAGGAGGTGCCTGCCAGTTTAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: PLEIRTKTIPNA*KSKGGACQFKL Trigger: GAGTTTAAACTGGCAGGCACCTCCTTTGCTCTTCAATGCATTAGGAATGGTTTTGGTACGAATTTCCAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
||
| 3UTR CAA 72 bp | TGGAGTTCCCACGGGTGTCTGTATCTGAGTCACTTATaGTGCTTTTTCAAACGTTCTCTTTGGAGTGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: WSSHGCLYLSHL*CFFKRSLWSGN Trigger: ATTGCCACTCCAAAGAGAACGTTTGAAAAAGCACAATAAGTGACTCAGATACAGACACCCGTGGGAACTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
||
| 3UTR CAA 72 bp | GGCAGGAGAGTCAGTCTGCAGTCGAAATGTACCCATTaGACAAAAATTCTTTATGCACTAGATATTGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRRVSLQSKCTH*TKILYALDIEF Trigger: GAACTCAATATCTAGTGCATAAAGAATTTTTGTCAAATGGGTACATTTCGACTGCAGACTGACTCTCCTGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| 3UTR CAA 72 bp | TCTGAGTCACTTATTGTGCTTTTTCAAACGTTCTCTTaGGAGTGGCAATGGTTTTATTCCTATGACTATAGC | + |
|
Preference number: 4 (lower is better) Translates to: SESLIVLFQTFS*EWQWFYSYDYS Trigger: GCTATAGTCATAGGAATAAAACCATTGCCACTCCAAAGAGAACGTTTGAAAAAGCACAATAAGTGACTCAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218362.2 |
||
| CDS CCA 90 bp | TGTGCGCGCCGGATAAGCTCCGCGGGCTCGGCCGCCGTTCCAGCCTaGCCCCGCTCCGGGGCTCCTCCGCCGCTCGGGACGCACGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: CARRISSAGSAAVPA*PRSGAPPPLGTHGG Trigger: GCCGCCGTGCGTCCCGAGCGGCGGAGGAGCCCCGGAGCGGGGCCAGGCTGGAACGGCGGCCGAGCCCGCGGAGCTTATCCGGCGCGCACA 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS TCA 90 bp | GGGAACCCCTGCCGAGGAGGCTGGCCGTGCGTCCCGCTCCTCTTGTaGCGGCAGCAATCCCTTCAGCTCCAGCAACGCCCGGTGGTATTT | + |
|
Preference number: 5 (lower is better) Translates to: GNPCRGGWPCVPLLL*RQQSLQLQQRPVVF Trigger: AAATACCACCGGGCGTTGCTGGAGCTGAAGGGATTGCTGCCGTCACAAGAGGAGCGGGACGCACGGCCAGCCTCCTCGGCAGGGGTTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS GCA 90 bp | TTTCTTGTCCTTGTAGCACTGCGCCCCTTGGCTCTTGAACTCGTGTaGGCGCCGGATAAGCTCCGCGGGCTCGGCCGCCGTTCCAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FLVLVALRPLALELV*APDKLRGLGRRSSL Trigger: CAGGCTGGAACGGCGGCCGAGCCCGCGGAGCTTATCCGGCGCGCACACGAGTTCAAGAGCCAAGGGGCGCAGTGCTACAAGGACAAGAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS CCA 90 bp | TGGCTTCAACCGTCTTGCTCTGCTCCTCTGAGAGGCGGCTGGATTTaGGAACCCCTGCCGAGGAGGCTGGCCGTGCGTCCCGCTCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: WLQPSCSAPLRGGWI*EPLPRRLAVRPAPL Trigger: AAGAGGAGCGGGACGCACGGCCAGCCTCCTCGGCAGGGGTTCCCAAATCCAGCCGCCTCTCAGAGGAGCAGAGCAAGACGGTTGAAGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR CAA 90 bp | AGGGAGAGAGCCCACGTCGGGACTCTCCACCACCGGTGCCTGGAAGTCCCTGGTGTAGCACTGCGCCCCTaGGCTCTTGAACTCGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RERAHVGTLHHRCLEVPGVALRP*ALELVC Trigger: GCACACGAGTTCAAGAGCCAAGGGGCGCAGTGCTAC...ACCAGGGACTTCCAGGCACCGGTGGTGGAGAGTCCCGACGTGGGCTCTCTCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS CCA 90 bp | TCTCAATGGCTTCAACCGTCTTGCTCTGCTCCTCTGAGAGGCGGCTaGATTTGGGAACCCCTGCCGAGGAGGCTGGCCGTGCGTCCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: SQWLQPSCSAPLRGG*IWEPLPRRLAVRPA Trigger: AGCGGGACGCACGGCCAGCCTCCTCGGCAGGGGTTCCCAAATCCAGCCGCCTCTCAGAGGAGCAGAGCAAGACGGTTGAAGCCATTGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR CAA 90 bp | ACTCTCCACCACCGGTGCCTGGAAGTCCCTGGTCAGGTACGAGTGTGGCTTGAGGTAGCACTGCGCCCCTaGGCTCTTGAACTCGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TLHHRCLEVPGQVRVWLEVALRP*ALELVC Trigger: GCACACGAGTTCAAGAGCCAAGGGGCGCAGTGCTAC...CTCAAGCCACACTCGTACCTGACCAGGGACTTCCAGGCACCGGTGGTGGAGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS TCA 90 bp | GTAACAGTCGATCTCAATGGCTTCAACCGTCTTGCTCTGCTCCTCTaGGAGGCGGCTGGATTTGGGAACCCCTGCCGAGGAGGCTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: VTVDLNGFNRLALLL*EAAGFGNPCRGGWP Trigger: CGGCCAGCCTCCTCGGCAGGGGTTCCCAAATCCAGCCGCCTCTCAGAGGAGCAGAGCAAGACGGTTGAAGCCATTGAGATCGACTGTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR CAA 90 bp | AGACCTGACCTCACAGTGGGAGAAAACAAAGTACAAGCCTGGACAAGTCCGGGGTGCGCCCCTTGGCTCTaGAACTCGTGTGCGCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RPDLTVGENKVQAWTSPGCAPWL*NSCARR Trigger: CCGGCGCGCACACGAGTTCAAGAGCCAAGGGGCGCA...CCCCGGACTTGTCCAGGCTTGTACTTTGTTTTCTCCCACTGTGAGGTCAGGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR CAA 90 bp | AAACACTGGGCCAAGTCAAAGCCACAGAACCATCCCCGGTCCACAAGACTTCCCGAGAGGCGGCTGGATTaGGGAACCCCTGCCGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KHWAKSKPQNHPRSTRLPERRLD*GTPAEE Trigger: CTCCTCGGCAGGGGTTCCCAAATCCAGCCGCCTCTC...GGGAAGTCTTGTGGACCGGGGATGGTTCTGTGGCTTTGACTTGGCCCAGTGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS GCA 90 bp | GTGACGGCAGCAATCCCTTCAGCTCCAGCAACGCCCGGTGGTATTTaGCGATGGCTTCGCGGAATTTCTTGTCCTTGTAGCACTGCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VTAAIPSAPATPGGI*RWLRGISCPCSTAP Trigger: GGGCGCAGTGCTACAAGGACAAGAAATTCCGCGAAGCCATCGGCAAATACCACCGGGCGTTGCTGGAGCTGAAGGGATTGCTGCCGTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS CCA 90 bp | GCAGCAATCCCTTCAGCTCCAGCAACGCCCGGTGGTATTTGCCGATaGCTTCGCGGAATTTCTTGTCCTTGTAGCACTGCGCCCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: AAIPSAPATPGGICR*LRGISCPCSTAPLG Trigger: GCCAAGGGGCGCAGTGCTACAAGGACAAGAAATTCCGCGAAGCCATCGGCAAATACCACCGGGCGTTGCTGGAGCTGAAGGGATTGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS GCA 90 bp | CTGCCAGGCTGTTGTAACAGTCGATCTCAATGGCTTCAACCGTCTTaGTCTGCTCCTCTGAGAGGCGGCTGGATTTGGGAACCCCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LPGCCNSRSQWLQPS*SAPLRGGWIWEPLP Trigger: CGGCAGGGGTTCCCAAATCCAGCCGCCTCTCAGAGGAGCAGAGCAAGACGGTTGAAGCCATTGAGATCGACTGTTACAACAGCCTGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR CAA 90 bp | GTTTCAATGTGGCATAGCATAAAAAGCATATGTGTCAGGAGACCAGGCGGGGACTGCGCCCCTTGGCTCTaGAACTCGTGTGCGCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: VSMWHSIKSICVRRPGGDCAPWL*NSCARR Trigger: CCGGCGCGCACACGAGTTCAAGAGCCAAGGGGCGCA...GTCCCCGCCTGGTCTCCTGACACATATGCTTTTTATGCTATGCCACATTGAAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR CAA 90 bp | AGCCAAGTCCTGGGGCAGTTTCTACAATCCCAGCCCACTCCACTAAGCACAGAGATGGCTTCAACCGTCTaGCTCTGCTCCTCTGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SQVLGQFLQSQPTPLSTEMASTV*LCSSER Trigger: CCTCTCAGAGGAGCAGAGCAAGACGGTTGAAGCCAT...CTCTGTGCTTAGTGGAGTGGGCTGGGATTGTAGAAACTGCCCCAGGACTTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR CAA 90 bp | TGCTGTTACAGCTGCCGGCTAGCTGGGGGTGGGAGAATGGTATGTGTGGTCACCATTGGTGTCTGTGGGTaGTCGGGTCCTTGCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: CCYSCRLAGGGRMVCVVTIGVCG*SGPCFF Trigger: AAAGAAGCAAGGACCCGACAACCCACAGACACCAAT...GGTGACCACACATACCATTCTCCCACCCCCAGCTAGCCGGCAGCTGTAACAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR CAA 90 bp | CCTTTGGCTCATTTCACCCTGCCCTTCTGCTGTTACAGCTGCCGGCTAGCTGGGATGTACCGAATCACATaGGTGTCTGTGGGTTGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PLAHFTLPFCCYSCRLAGMYRIT*VSVGCR Trigger: CCGACAACCCACAGACACCAATGTGATTCGGTACAT...CCCAGCTAGCCGGCAGCTGTAACAGCAGAAGGGCAGGGTGAAATGAGCCAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR CAA 90 bp | AGACCTGACCTCACAGTGGGAGAAAACAAAGTACAAGCCTGGACAAGTCCGGGGATGGCTTCAACCGTCTaGCTCTGCTCCTCTGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RPDLTVGENKVQAWTSPGMASTV*LCSSER Trigger: CCTCTCAGAGGAGCAGAGCAAGACGGTTGAAGCCAT...CCCCGGACTTGTCCAGGCTTGTACTTTGTTTTCTCCCACTGTGAGGTCAGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR CAA 90 bp | GGGACCAGTGAGCCCTCGGGACATGTTTCAATGTGGCATAGCATAAAAAGCATAAACGCCCGGTGGTATTaGCCGATGGCTTCGCGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GTSEPSGHVSMWHSIKSINARWY*PMASRN Trigger: ATTCCGCGAAGCCATCGGCAAATACCACCGGGCGTT...TATGCTTTTTATGCTATGCCACATTGAAACATGTCCCGAGGGCTCACTGGTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR CAA 90 bp | ATATTGCACTATGGTGGGGGACCAGTGAGCCCTCGGGACATGTTTCAATGTGGCATTGGTGTCTGTGGGTaGTCGGGTCCTTGCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: ILHYGGGPVSPRDMFQCGIGVCG*SGPCFF Trigger: AAAGAAGCAAGGACCCGACAACCCACAGACACCAAT...GCCACATTGAAACATGTCCCGAGGGCTCACTGGTCCCCCACCATAGTGCAATAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR CAA 90 bp | TGTCCTATATTGCACTATGGTGGGGGACCAGTGAGCCCTCGGGACATGTTTCAAATGTACCGAATCACATaGGTGTCTGTGGGTTGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: CPILHYGGGPVSPRDMFQMYRIT*VSVGCR Trigger: CCGACAACCCACAGACACCAATGTGATTCGGTACAT...TTGAAACATGTCCCGAGGGCTCACTGGTCCCCCACCATAGTGCAATATAGGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR CAA 90 bp | CCTATATTGCACTATGGTGGGGGACCAGTGAGCCCTCGGGACATGTTTCAATGTGGCTTCTTTCTCCCTTaGGGAACATCTGCTGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PILHYGGGPVSPRDMFQCGFFLP*GTSAEL Trigger: AAGCTCAGCAGATGTTCCCAAAGGGAGAAAGAAGCC...ACATTGAAACATGTCCCGAGGGCTCACTGGTCCCCCACCATAGTGCAATATAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR CAA 90 bp | GTAATAATCTCATATGGATTTCCCAACTTCCCTATCTTCATGAAGACTGGGACTGAGAGGCGGCTGGATTaGGGAACCCCTGCCGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VIISYGFPNFPIFMKTGTERRLD*GTPAEE Trigger: CTCCTCGGCAGGGGTTCCCAAATCCAGCCGCCTCTC...AGTCCCAGTCTTCATGAAGATAGGGAAGTTGGGAAATCCATATGAGATTATTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS-3UTR CAA 90 bp | ATGTGGCATAGCATAAAAAGCATATGTGTCAGGAGACCAGGCGGGGACCCGATTGGCTTCTTTCTCCCTTaGGGAACATCTGCTGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: MWHSIKSICVRRPGGDPIGFFLP*GTSAEL Trigger: AAGCTCAGCAGATGTTCCCAAAGGGAGAAAGAAGCC...AATCGGGTCCCCGCCTGGTCTCCTGACACATATGCTTTTTATGCTATGCCACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS GCA 72 bp | CTTGTAGCACTGCGCCCCTTGGCTCTTGAACTCGTGTaGGCGCCGGATAAGCTCCGCGGGCTCGGCCGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: LVALRPLALELV*APDKLRGLGRR Trigger: ACGGCGGCCGAGCCCGCGGAGCTTATCCGGCGCGCACACGAGTTCAAGAGCCAAGGGGCGCAGTGCTACAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS CCA 72 bp | CCGTCTTGCTCTGCTCCTCTGAGAGGCGGCTGGATTTaGGAACCCCTGCCGAGGAGGCTGGCCGTGCGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PSCSAPLRGGWI*EPLPRRLAVRP Trigger: GGGACGCACGGCCAGCCTCCTCGGCAGGGGTTCCCAAATCCAGCCGCCTCTCAGAGGAGCAGAGCAAGACGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS CAA 72 bp | ACCGTCTTGCTCTGCTCCTCTGAGAGGCGGCTGGATTaGGGAACCCCTGCCGAGGAGGCTGGCCGTGCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TVLLCSSERRLD*GTPAEEAGRAS Trigger: GGACGCACGGCCAGCCTCCTCGGCAGGGGTTCCCAAATCCAGCCGCCTCTCAGAGGAGCAGAGCAAGACGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS CAA 90 bp | ATGGCTTCAACCGTCTTGCTCTGCTCCTCTGAGAGGCGGCTGGATTaGGGAACCCCTGCCGAGGAGGCTGGCCGTGCGTCCCGCTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: MASTVLLCSSERRLD*GTPAEEAGRASRSS Trigger: AGAGGAGCGGGACGCACGGCCAGCCTCCTCGGCAGGGGTTCCCAAATCCAGCCGCCTCTCAGAGGAGCAGAGCAAGACGGTTGAAGCCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS CCA 72 bp | CTTCAACCGTCTTGCTCTGCTCCTCTGAGAGGCGGCTaGATTTGGGAACCCCTGCCGAGGAGGCTGGCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: LQPSCSAPLRGG*IWEPLPRRLAV Trigger: CACGGCCAGCCTCCTCGGCAGGGGTTCCCAAATCCAGCCGCCTCTCAGAGGAGCAGAGCAAGACGGTTGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS CAA 90 bp | GCCGATGGCTTCGCGGAATTTCTTGTCCTTGTAGCACTGCGCCCCTaGGCTCTTGAACTCGTGTGCGCGCCGGATAAGCTCCGCGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ADGFAEFLVLVALRP*ALELVCAPDKLRGL Trigger: GAGCCCGCGGAGCTTATCCGGCGCGCACACGAGTTCAAGAGCCAAGGGGCGCAGTGCTACAAGGACAAGAAATTCCGCGAAGCCATCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS CCA 72 bp | CCTTCAGCTCCAGCAACGCCCGGTGGTATTTGCCGATaGCTTCGCGGAATTTCTTGTCCTTGTAGCACTGCG | + |
|
Preference number: 6 (lower is better) Translates to: PSAPATPGGICR*LRGISCPCSTA Trigger: CGCAGTGCTACAAGGACAAGAAATTCCGCGAAGCCATCGGCAAATACCACCGGGCGTTGCTGGAGCTGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS GCA 72 bp | GCAATCCCTTCAGCTCCAGCAACGCCCGGTGGTATTTaGCGATGGCTTCGCGGAATTTCTTGTCCTTGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: AIPSAPATPGGI*RWLRGISCPCS Trigger: GCTACAAGGACAAGAAATTCCGCGAAGCCATCGGCAAATACCACCGGGCGTTGCTGGAGCTGAAGGGATTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS GCA 72 bp | TGTTGTAACAGTCGATCTCAATGGCTTCAACCGTCTTaGTCTGCTCCTCTGAGAGGCGGCTGGATTTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: CCNSRSQWLQPS*SAPLRGGWIWE Trigger: TTCCCAAATCCAGCCGCCTCTCAGAGGAGCAGAGCAAGACGGTTGAAGCCATTGAGATCGACTGTTACAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||
| CDS CAA 72 bp | ACCGAATCACATTGGTGTCTGTGGGTTGTCGGGTCCTaGCTTCTTTTAGGTAGTAGAGAGCTTTATCATAGT | + |
|
Preference number: 6 (lower is better) Translates to: TESHWCLWVVGS*LLLGSRELYHS Trigger: ACTATGATAAAGCTCTCTACTACCTAAAAGAAGCAAGGACCCGACAACCCACAGACACCAATGTGATTCGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036116.6 ENSMUST00000218362.2 |
||