Pregenerated sensors for TTC8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021013Ensembl transcript IDs: ENSMUST00000079146.13, ENSMUST00000085109.10, ENSMUST00000132878.2
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTTTGCAGTCTTGTAGGATGCCTTATGAGGTCTGCATCACAGTATTaGTACAAATGCACTCAGTGCGTTTTCTTCCCTGTGCGCTGGCCC | + |
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Preference number: 1 (lower is better) Translates to: VCSLVGCLMRSASQY*YKCTQCVFFPVRWP Trigger: GGGCCAGCGCACAGGGAAGAAAACGCACTGAGTGCATTTGTACCAATACTGTGATGCAGACCTCATAAGGCATCCTACAAGACTGCAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| 3UTR-3UTR CCA 90 bp | TTACCTTATAAAACAACAAAGTTCAGACAACAGGTTCGGGTTTGCAGTCTTGTATCTGCATCACAGTATTaGTACAAATGCACTCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: LPYKTTKFRQQVRVCSLVSASQY*YKCTQC Trigger: GCACTGAGTGCATTTGTACCAATACTGTGATGCAGA...TACAAGACTGCAAACCCGAACCTGTTGTCTGAACTTTGTTGTTTTATAAGGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| 3UTR CCA 72 bp | TACAAATGCACTCAGTGCGTTTTCTTCCCTGTGCGCTaGCCCTCCGTGAAGGCTTATGTGGCCCAAGCACTG | + |
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Preference number: 3 (lower is better) Translates to: YKCTQCVFFPVR*PSVKAYVAQAL Trigger: CAGTGCTTGGGCCACATAAGCCTTCACGGAGGGCCAGCGCACAGGGAAGAAAACGCACTGAGTGCATTTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| 3UTR CCA 72 bp | CTTGTAGGATGCCTTATGAGGTCTGCATCACAGTATTaGTACAAATGCACTCAGTGCGTTTTCTTCCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: LVGCLMRSASQY*YKCTQCVFFPV Trigger: CACAGGGAAGAAAACGCACTGAGTGCATTTGTACCAATACTGTGATGCAGACCTCATAAGGCATCCTACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| 3UTR GCA 72 bp | TTCAGACAACAGGTTCGGGTTTGCAGTCTTGTAGGATaGCTTATGAGGTCTGCATCACAGTATTGGTACAAA | + |
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Preference number: 3 (lower is better) Translates to: FRQQVRVCSLVG*LMRSASQYWYK Trigger: TTTGTACCAATACTGTGATGCAGACCTCATAAGGCATCCTACAAGACTGCAAACCCGAACCTGTTGTCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| 3UTR-3UTR CAA 90 bp | TTACCTTATAAAACAACAAAGTTCAGACAACAGGTTCGGGTTTGCAGTCTTGTAGTCTGCATCACAGTATaGGTACAAATGCACTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: LPYKTTKFRQQVRVCSLVVCITV*VQMHSV Trigger: CACTGAGTGCATTTGTACCAATACTGTGATGCAGAC...TACAAGACTGCAAACCCGAACCTGTTGTCTGAACTTTGTTGTTTTATAAGGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| 3UTR TCA 72 bp | GAGAGGAGAGCATGGCAGAAGTGCACCCAACATATATaGCATATGTCTTTGAAAATGTCTGTATCTAACAAT | + |
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Preference number: 3 (lower is better) Translates to: ERRAWQKCTQHI*HMSLKMSVSNN Trigger: ATTGTTAGATACAGACATTTTCAAAGACATATGTCATATATGTTGGGTGCACTTCTGCCATGCTCTCCTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR CCA 90 bp | GTACAAATGCACTCAGTGCGTTTTCTTCCCTGTGCGCTGGCCCTCCGTGAAGGCGCATGGTGGTTGTTGTaGACCAGGGCCAGCCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: VQMHSVRFLPCALALREGAWWLL*TRASLK Trigger: CTTCAGGCTGGCCCTGGTCCACAACAACCACCATGC...GCCTTCACGGAGGGCCAGCGCACAGGGAAGAAAACGCACTGAGTGCATTTGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR GCA 90 bp | GTACAAATGCACTCAGTGCGTTTTCTTCCCTGTGCGCTGGCCCTCCGTGAAGGCCCGCATCTCCAGCACTaGCAGGTTGTTGTAGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: VQMHSVRFLPCALALREGPHLQH*QVVVGF Trigger: GAAGCCTACAACAACCTGGCAGTGCTGGAGATGCGG...GCCTTCACGGAGGGCCAGCGCACAGGGAAGAAAACGCACTGAGTGCATTTGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR CCA 90 bp | ATGCACTCAGTGCGTTTTCTTCCCTGTGCGCTGGCCCTCCGTGAAGGCTTATGTGCATGGTGGTTGTTGTaGACCAGGGCCAGCCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: MHSVRFLPCALALREGLCAWWLL*TRASLK Trigger: CTTCAGGCTGGCCCTGGTCCACAACAACCACCATGC...ACATAAGCCTTCACGGAGGGCCAGCGCACAGGGAAGAAAACGCACTGAGTGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR TCA 90 bp | GTACAAATGCACTCAGTGCGTTTTCTTCCCTGTGCGCTGGCCCTCCGTGAAGGCAAGCAGTCCCCAGTCTaGCGAATCTTCCAGATGAGC | + |
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Preference number: 4 (lower is better) Translates to: VQMHSVRFLPCALALREGKQSPV*RIFQMS Trigger: GCTCATCTGGAAGATTCGTCAGACTGGGGACTGCTT...GCCTTCACGGAGGGCCAGCGCACAGGGAAGAAAACGCACTGAGTGCATTTGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR TCA 90 bp | GCATCACAGTATTGGTACAAATGCACTCAGTGCGTTTTCTTCCCTGTGCGCTGGGGACCAGGGCCAGCCTaGAGCATTGGTGGGCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: ASQYWYKCTQCVFFPVRWGPGPA*SIGGPS Trigger: ACTTGGCCCACCAATGCTTCAGGCTGGCCCTGGTCC...CCAGCGCACAGGGAAGAAAACGCACTGAGTGCATTTGTACCAATACTGTGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR CCA 90 bp | GTACAAATGCACTCAGTGCGTTTTCTTCCCTGTGCGCTGGCCCTCCGTGAAGGCTCCAGCTTGAGTGATTaGCCTGACAGCTTGAGTCGG | + |
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Preference number: 4 (lower is better) Translates to: VQMHSVRFLPCALALREGSSLSD*PDSLSR Trigger: CCGACTCAAGCTGTCAGGCCAATCACTCAAGCTGGA...GCCTTCACGGAGGGCCAGCGCACAGGGAAGAAAACGCACTGAGTGCATTTGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR CCA 90 bp | GTACAAATGCACTCAGTGCGTTTTCTTCCCTGTGCGCTGGCCCTCCGTGAAGGCTGTGGCTCATACATGTaGGGTGCCAAAGACGATGCG | + |
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Preference number: 4 (lower is better) Translates to: VQMHSVRFLPCALALREGCGSYM*GAKDDA Trigger: CGCATCGTCTTTGGCACCCCACATGTATGAGCCACA...GCCTTCACGGAGGGCCAGCGCACAGGGAAGAAAACGCACTGAGTGCATTTGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR GCA 90 bp | GTACAAATGCACTCAGTGCGTTTTCTTCCCTGTGCGCTGGCCCTCCGTGAAGGCATTCCCACAGCTATGTaGCCCAGGTTGTACCAGACA | + |
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Preference number: 4 (lower is better) Translates to: VQMHSVRFLPCALALREGIPTAM*PRLYQT Trigger: TGTCTGGTACAACCTGGGGCACATAGCTGTGGGAAT...GCCTTCACGGAGGGCCAGCGCACAGGGAAGAAAACGCACTGAGTGCATTTGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR TCA 90 bp | AGGTCTGCATCACAGTATTGGTACAAATGCACTCAGTGCGTTTTCTTCCCTGTGGGACCAGGGCCAGCCTaGAGCATTGGTGGGCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: RSASQYWYKCTQCVFFPVGPGPA*SIGGPS Trigger: ACTTGGCCCACCAATGCTTCAGGCTGGCCCTGGTCC...CACAGGGAAGAAAACGCACTGAGTGCATTTGTACCAATACTGTGATGCAGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR CCA 90 bp | ATGCACTCAGTGCGTTTTCTTCCCTGTGCGCTGGCCCTCCGTGAAGGCTTATGTAGATCGGCGCAGAGCTaGAACTTCCTGCGTCTAAAA | + |
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Preference number: 4 (lower is better) Translates to: MHSVRFLPCALALREGLCRSAQS*NFLRLK Trigger: TTTTAGACGCAGGAAGTTCCAGCTCTGCGCCGATCT...ACATAAGCCTTCACGGAGGGCCAGCGCACAGGGAAGAAAACGCACTGAGTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR CCA 90 bp | ATGCACTCAGTGCGTTTTCTTCCCTGTGCGCTGGCCCTCCGTGAAGGCTTATGTAGCCTGAAGCATTGGTaGGCCAAGTTTGTATCTCCG | + |
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Preference number: 4 (lower is better) Translates to: MHSVRFLPCALALREGLCSLKHW*AKFVSP Trigger: CGGAGATACAAACTTGGCCCACCAATGCTTCAGGCT...ACATAAGCCTTCACGGAGGGCCAGCGCACAGGGAAGAAAACGCACTGAGTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR TCA 90 bp | ACAAAGTTCAGACAACAGGTTCGGGTTTGCAGTCTTGTAGGATGCCTTATGAGGCGTGCCTGTTCAACGTaGCCCTTCCGCATCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: TKFRQQVRVCSLVGCLMRRACST*PFRISS Trigger: GCTGGAGATGCGGAAGGGTCACGTTGAACAGGCACG...CCTCATAAGGCATCCTACAAGACTGCAAACCCGAACCTGTTGTCTGAACTTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR GCA 90 bp | GTACAAATGCACTCAGTGCGTTTTCTTCCCTGTGCGCTGGCCCTCCGTGAAGGCGTACCAGACATCAGCTaGCTCTTCTTCATTTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: VQMHSVRFLPCALALREGVPDIS*LFFIFS Trigger: GCTGAAAATGAAGAAGAGGCAGCTGATGTCTGGTAC...GCCTTCACGGAGGGCCAGCGCACAGGGAAGAAAACGCACTGAGTGCATTTGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR TCA 90 bp | GTACAAATGCACTCAGTGCGTTTTCTTCCCTGTGCGCTGGCCCTCCGTGAAGGCGTACTCTGCTGCAGATaGACTGTTATTCATTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: VQMHSVRFLPCALALREGVLCCR*TVIHFL Trigger: GAGGAAATGAATAACAGTTCATCTGCAGCAGAGTAC...GCCTTCACGGAGGGCCAGCGCACAGGGAAGAAAACGCACTGAGTGCATTTGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR GCA 90 bp | GCATCACAGTATTGGTACAAATGCACTCAGTGCGTTTTCTTCCCTGTGCGCTGGAGTGGTTGCTTCCAATaGAGGCGATGGCTTCCACGT | + |
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Preference number: 4 (lower is better) Translates to: ASQYWYKCTQCVFFPVRWSGCFQ*RRWLPR Trigger: ACGTGGAAGCCATCGCCTGCATTGGAAGCAACCACT...CCAGCGCACAGGGAAGAAAACGCACTGAGTGCATTTGTACCAATACTGTGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR TCA 90 bp | ACAACAGGTTCGGGTTTGCAGTCTTGTAGGATGCCTTATGAGGTCTGCATCACAATGGGTCTTCCAGCTTaGGTGATTGGCCTGACAGCT | + |
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Preference number: 4 (lower is better) Translates to: TTGSGLQSCRMPYEVCITMGLPA*VIGLTA Trigger: AGCTGTCAGGCCAATCACTCAAGCTGGAAGACCCAT...TGTGATGCAGACCTCATAAGGCATCCTACAAGACTGCAAACCCGAACCTGTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR GCA 90 bp | AGGTCTGCATCACAGTATTGGTACAAATGCACTCAGTGCGTTTTCTTCCCTGTGTCTCCAGCATCTGCGTaGATAGATCGGCGCAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: RSASQYWYKCTQCVFFPVSPASA*IDRRRA Trigger: AGCTCTGCGCCGATCTATGCACGCAGATGCTGGAGA...CACAGGGAAGAAAACGCACTGAGTGCATTTGTACCAATACTGTGATGCAGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR GCA 90 bp | ATGCACTCAGTGCGTTTTCTTCCCTGTGCGCTGGCCCTCCGTGAAGGCTTATGTGTGTCTACCATTTCCTaGTGCTTCAAGGCTGATTTA | + |
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Preference number: 4 (lower is better) Translates to: MHSVRFLPCALALREGLCVSTIS*CFKADL Trigger: TAAATCAGCCTTGAAGCAGCAGGAAATGGTAGACAC...ACATAAGCCTTCACGGAGGGCCAGCGCACAGGGAAGAAAACGCACTGAGTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR GCA 90 bp | ACAACAGGTTCGGGTTTGCAGTCTTGTAGGATGCCTTATGAGGTCTGCATCACAAGTGGTTGCTTCCAATaGAGGCGATGGCTTCCACGT | + |
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Preference number: 4 (lower is better) Translates to: TTGSGLQSCRMPYEVCITSGCFQ*RRWLPR Trigger: ACGTGGAAGCCATCGCCTGCATTGGAAGCAACCACT...TGTGATGCAGACCTCATAAGGCATCCTACAAGACTGCAAACCCGAACCTGTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR GCA 90 bp | ACAAAGTTCAGACAACAGGTTCGGGTTTGCAGTCTTGTAGGATGCCTTATGAGGCCGCATCTCCAGCACTaGCAGGTTGTTGTAGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: TKFRQQVRVCSLVGCLMRPHLQH*QVVVGF Trigger: GAAGCCTACAACAACCTGGCAGTGCTGGAGATGCGG...CCTCATAAGGCATCCTACAAGACTGCAAACCCGAACCTGTTGTCTGAACTTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR GCA 90 bp | ATGCACTCAGTGCGTTTTCTTCCCTGTGCGCTGGCCCTCCGTGAAGGCTTATGTCAGAGCATAGCAAAGTaGTGCTTCAGCTGCTTAATT | + |
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Preference number: 4 (lower is better) Translates to: MHSVRFLPCALALREGLCQSIAK*CFSCLI Trigger: AATTAAGCAGCTGAAGCAGCACTTTGCTATGCTCTG...ACATAAGCCTTCACGGAGGGCCAGCGCACAGGGAAGAAAACGCACTGAGTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR CCA 90 bp | GCATCACAGTATTGGTACAAATGCACTCAGTGCGTTTTCTTCCCTGTGCGCTGGCCGAAGGGCAACCTCTaGCTGGTCAGAATAAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: ASQYWYKCTQCVFFPVRWPKGNL*LVRIKV Trigger: CACTTTTATTCTGACCAGCCAGAGGTTGCCCTTCGG...CCAGCGCACAGGGAAGAAAACGCACTGAGTGCATTTGTACCAATACTGTGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR TCA 90 bp | ACAAAGTTCAGACAACAGGTTCGGGTTTGCAGTCTTGTAGGATGCCTTATGAGGATGGGTCTTCCAGCTTaGGTGATTGGCCTGACAGCT | + |
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Preference number: 4 (lower is better) Translates to: TKFRQQVRVCSLVGCLMRMGLPA*VIGLTA Trigger: AGCTGTCAGGCCAATCACTCAAGCTGGAAGACCCAT...CCTCATAAGGCATCCTACAAGACTGCAAACCCGAACCTGTTGTCTGAACTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR TCA 90 bp | AGGTCTGCATCACAGTATTGGTACAAATGCACTCAGTGCGTTTTCTTCCCTGTGAAGCAGTCCCCAGTCTaGCGAATCTTCCAGATGAGC | + |
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Preference number: 4 (lower is better) Translates to: RSASQYWYKCTQCVFFPVKQSPV*RIFQMS Trigger: GCTCATCTGGAAGATTCGTCAGACTGGGGACTGCTT...CACAGGGAAGAAAACGCACTGAGTGCATTTGTACCAATACTGTGATGCAGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR TCA 90 bp | ACAACAGGTTCGGGTTTGCAGTCTTGTAGGATGCCTTATGAGGTCTGCATCACACACCAGTCCTTGTACTaGGAATACTCCGTGGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: TTGSGLQSCRMPYEVCITHQSLY*EYSVER Trigger: CCTTTCCACGGAGTATTCTCAGTACAAGGACTGGTG...TGTGATGCAGACCTCATAAGGCATCCTACAAGACTGCAAACCCGAACCTGTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR GCA 90 bp | ACAAAGTTCAGACAACAGGTTCGGGTTTGCAGTCTTGTAGGATGCCTTATGAGGGATTTCTCCAGCATCTaGGTGCATAGATCGGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: TKFRQQVRVCSLVGCLMRDFSSI*VHRSAQ Trigger: CTGCGCCGATCTATGCACGCAGATGCTGGAGAAATC...CCTCATAAGGCATCCTACAAGACTGCAAACCCGAACCTGTTGTCTGAACTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR CCA 90 bp | ACAAAGTTCAGACAACAGGTTCGGGTTTGCAGTCTTGTAGGATGCCTTATGAGGTGTGGCTCATACATGTaGGGTGCCAAAGACGATGCG | + |
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Preference number: 4 (lower is better) Translates to: TKFRQQVRVCSLVGCLMRCGSYM*GAKDDA Trigger: CGCATCGTCTTTGGCACCCCACATGTATGAGCCACA...CCTCATAAGGCATCCTACAAGACTGCAAACCCGAACCTGTTGTCTGAACTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR TCA 90 bp | GCATCACAGTATTGGTACAAATGCACTCAGTGCGTTTTCTTCCCTGTGCGCTGGGCGATGGCTTCCACGTaGGTATTGTCTTGTTTTAGA | + |
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Preference number: 4 (lower is better) Translates to: ASQYWYKCTQCVFFPVRWAMAST*VLSCFR Trigger: TCTAAAACAAGACAATACTCACGTGGAAGCCATCGC...CCAGCGCACAGGGAAGAAAACGCACTGAGTGCATTTGTACCAATACTGTGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR GCA 90 bp | ACAAAGTTCAGACAACAGGTTCGGGTTTGCAGTCTTGTAGGATGCCTTATGAGGATTCCCACAGCTATGTaGCCCAGGTTGTACCAGACA | + |
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Preference number: 4 (lower is better) Translates to: TKFRQQVRVCSLVGCLMRIPTAM*PRLYQT Trigger: TGTCTGGTACAACCTGGGGCACATAGCTGTGGGAAT...CCTCATAAGGCATCCTACAAGACTGCAAACCCGAACCTGTTGTCTGAACTTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR CCA 90 bp | AGGTCTGCATCACAGTATTGGTACAAATGCACTCAGTGCGTTTTCTTCCCTGTGAGATCGGCGCAGAGCTaGAACTTCCTGCGTCTAAAA | + |
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Preference number: 4 (lower is better) Translates to: RSASQYWYKCTQCVFFPVRSAQS*NFLRLK Trigger: TTTTAGACGCAGGAAGTTCCAGCTCTGCGCCGATCT...CACAGGGAAGAAAACGCACTGAGTGCATTTGTACCAATACTGTGATGCAGACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR CCA 90 bp | GTACAAATGCACTCAGTGCGTTTTCTTCCCTGTGCGCTGGCCCTCCGTGAAGGCGCCAACTTAGGCTTCTaGGAATATTTTGTTAAATTC | + |
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Preference number: 4 (lower is better) Translates to: VQMHSVRFLPCALALREGANLGF*EYFVKF Trigger: GAATTTAACAAAATATTCCCAGAAGCCTAAGTTGGC...GCCTTCACGGAGGGCCAGCGCACAGGGAAGAAAACGCACTGAGTGCATTTGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR CCA 90 bp | AGGTCTGCATCACAGTATTGGTACAAATGCACTCAGTGCGTTTTCTTCCCTGTGCCGAAGGGCAACCTCTaGCTGGTCAGAATAAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: RSASQYWYKCTQCVFFPVPKGNL*LVRIKV Trigger: CACTTTTATTCTGACCAGCCAGAGGTTGCCCTTCGG...CACAGGGAAGAAAACGCACTGAGTGCATTTGTACCAATACTGTGATGCAGACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR TCA 90 bp | ACAACAGGTTCGGGTTTGCAGTCTTGTAGGATGCCTTATGAGGTCTGCATCACAACAGGCCCAGGTTGTTaGAAAGCTGGCAGTTATAAA | + |
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Preference number: 4 (lower is better) Translates to: TTGSGLQSCRMPYEVCITTGPGC*KAGSYK Trigger: TTTATAACTGCCAGCTTTTCAACAACCTGGGCCTGT...TGTGATGCAGACCTCATAAGGCATCCTACAAGACTGCAAACCCGAACCTGTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR TCA 90 bp | CCTGTTTTTCTAGTGTTACCTTATAAAACAACAAAGTTCAGACAACAGGTTCGGCGTGCCTGTTCAACGTaGCCCTTCCGCATCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: PVFLVLPYKTTKFRQQVRRACST*PFRISS Trigger: GCTGGAGATGCGGAAGGGTCACGTTGAACAGGCACG...CCGAACCTGTTGTCTGAACTTTGTTGTTTTATAAGGTAACACTAGAAAAACAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR CCA 90 bp | AGGTCTGCATCACAGTATTGGTACAAATGCACTCAGTGCGTTTTCTTCCCTGTGCTGTTCCATTGTACCTaGTCTTCCACTCTGTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: RSASQYWYKCTQCVFFPVLFHCT*SSTLCA Trigger: AGCACACAGAGTGGAAGACCAGGTACAATGGAACAG...CACAGGGAAGAAAACGCACTGAGTGCATTTGTACCAATACTGTGATGCAGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR CCA 90 bp | ACAAAGTTCAGACAACAGGTTCGGGTTTGCAGTCTTGTAGGATGCCTTATGAGGCTGTTCCATTGTACCTaGTCTTCCACTCTGTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: TKFRQQVRVCSLVGCLMRLFHCT*SSTLCA Trigger: AGCACACAGAGTGGAAGACCAGGTACAATGGAACAG...CCTCATAAGGCATCCTACAAGACTGCAAACCCGAACCTGTTGTCTGAACTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS-3UTR TCA 90 bp | ACAACAGGTTCGGGTTTGCAGTCTTGTAGGATGCCTTATGAGGTCTGCATCACAGTACTCTGCTGCAGATaGACTGTTATTCATTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TTGSGLQSCRMPYEVCITVLCCR*TVIHFL Trigger: GAGGAAATGAATAACAGTTCATCTGCAGCAGAGTAC...TGTGATGCAGACCTCATAAGGCATCCTACAAGACTGCAAACCCGAACCTGTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS-3UTR TCA 90 bp | AGGTCTGCATCACAGTATTGGTACAAATGCACTCAGTGCGTTTTCTTCCCTGTGACAGGCCCAGGTTGTTaGAAAGCTGGCAGTTATAAA | + |
|
Preference number: 4 (lower is better) Translates to: RSASQYWYKCTQCVFFPVTGPGC*KAGSYK Trigger: TTTATAACTGCCAGCTTTTCAACAACCTGGGCCTGT...CACAGGGAAGAAAACGCACTGAGTGCATTTGTACCAATACTGTGATGCAGACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS-3UTR GCA 90 bp | AGGTCTGCATCACAGTATTGGTACAAATGCACTCAGTGCGTTTTCTTCCCTGTGGTACCAGACATCAGCTaGCTCTTCTTCATTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSASQYWYKCTQCVFFPVVPDIS*LFFIFS Trigger: GCTGAAAATGAAGAAGAGGCAGCTGATGTCTGGTAC...CACAGGGAAGAAAACGCACTGAGTGCATTTGTACCAATACTGTGATGCAGACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS-3UTR GCA 90 bp | ACAACAGGTTCGGGTTTGCAGTCTTGTAGGATGCCTTATGAGGTCTGCATCACATCTACCATTTCCTGCTaGTTCAAGGCTGATTTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TTGSGLQSCRMPYEVCITSTISC*FKADLN Trigger: GTTTAAATCAGCCTTGAAGCAGCAGGAAATGGTAGA...TGTGATGCAGACCTCATAAGGCATCCTACAAGACTGCAAACCCGAACCTGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS-3UTR GCA 90 bp | ACAAAGTTCAGACAACAGGTTCGGGTTTGCAGTCTTGTAGGATGCCTTATGAGGGTGTCTACCATTTCCTaGTGCTTCAAGGCTGATTTA | + |
|
Preference number: 4 (lower is better) Translates to: TKFRQQVRVCSLVGCLMRVSTIS*CFKADL Trigger: TAAATCAGCCTTGAAGCAGCAGGAAATGGTAGACAC...CCTCATAAGGCATCCTACAAGACTGCAAACCCGAACCTGTTGTCTGAACTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS-3UTR GCA 90 bp | ACAACAGGTTCGGGTTTGCAGTCTTGTAGGATGCCTTATGAGGTCTGCATCACACTTATCAGAGACTGTTaGGAAATTAAAGTGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TTGSGLQSCRMPYEVCITLIRDC*EIKVWL Trigger: GAGCCACACTTTAATTTCGCAACAGTCTCTGATAAG...TGTGATGCAGACCTCATAAGGCATCCTACAAGACTGCAAACCCGAACCTGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS-3UTR GCA 90 bp | ACAAAGTTCAGACAACAGGTTCGGGTTTGCAGTCTTGTAGGATGCCTTATGAGGCAGAGCATAGCAAAGTaGTGCTTCAGCTGCTTAATT | + |
|
Preference number: 4 (lower is better) Translates to: TKFRQQVRVCSLVGCLMRQSIAK*CFSCLI Trigger: AATTAAGCAGCTGAAGCAGCACTTTGCTATGCTCTG...CCTCATAAGGCATCCTACAAGACTGCAAACCCGAACCTGTTGTCTGAACTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS-3UTR CCA 90 bp | ACAACAGGTTCGGGTTTGCAGTCTTGTAGGATGCCTTATGAGGTCTGCATCACATCAGCAATTCCTTCCTaGTCCACATCAATTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: TTGSGLQSCRMPYEVCITSAIPS*STSISS Trigger: AGATGAAATTGATGTGGACCAGGAAGGAATTGCTGA...TGTGATGCAGACCTCATAAGGCATCCTACAAGACTGCAAACCCGAACCTGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| 3UTR CAA 72 bp | TCTTGTAGGATGCCTTATGAGGTCTGCATCACAGTATaGGTACAAATGCACTCAGTGCGTTTTCTTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SCRMPYEVCITV*VQMHSVRFLPC Trigger: ACAGGGAAGAAAACGCACTGAGTGCATTTGTACCAATACTGTGATGCAGACCTCATAAGGCATCCTACAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS-3UTR GCA 90 bp | CCTGTTTTTCTAGTGTTACCTTATAAAACAACAAAGTTCAGACAACAGGTTCGGGATTTCTCCAGCATCTaGGTGCATAGATCGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PVFLVLPYKTTKFRQQVRDFSSI*VHRSAQ Trigger: CTGCGCCGATCTATGCACGCAGATGCTGGAGAAATC...CCGAACCTGTTGTCTGAACTTTGTTGTTTTATAAGGTAACACTAGAAAAACAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS-3UTR GCA 90 bp | AGGTCTGCATCACAGTATTGGTACAAATGCACTCAGTGCGTTTTCTTCCCTGTGTCTACCATTTCCTGCTaGTTCAAGGCTGATTTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RSASQYWYKCTQCVFFPVSTISC*FKADLN Trigger: GTTTAAATCAGCCTTGAAGCAGCAGGAAATGGTAGA...CACAGGGAAGAAAACGCACTGAGTGCATTTGTACCAATACTGTGATGCAGACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS-3UTR GCA 90 bp | ACAAAGTTCAGACAACAGGTTCGGGTTTGCAGTCTTGTAGGATGCCTTATGAGGCTTATCAGAGACTGTTaGGAAATTAAAGTGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TKFRQQVRVCSLVGCLMRLIRDC*EIKVWL Trigger: GAGCCACACTTTAATTTCGCAACAGTCTCTGATAAG...CCTCATAAGGCATCCTACAAGACTGCAAACCCGAACCTGTTGTCTGAACTTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS-3UTR CCA 90 bp | CCTGTTTTTCTAGTGTTACCTTATAAAACAACAAAGTTCAGACAACAGGTTCGGGCCAGCCTGAAGCATTaGTGGGCCAAGTTTGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: PVFLVLPYKTTKFRQQVRASLKH*WAKFVS Trigger: AGATACAAACTTGGCCCACCAATGCTTCAGGCTGGC...CCGAACCTGTTGTCTGAACTTTGTTGTTTTATAAGGTAACACTAGAAAAACAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS-3UTR CCA 90 bp | TTACCTTATAAAACAACAAAGTTCAGACAACAGGTTCGGGTTTGCAGTCTTGTAGCCAGCCTGAAGCATTaGTGGGCCAAGTTTGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: LPYKTTKFRQQVRVCSLVASLKH*WAKFVS Trigger: AGATACAAACTTGGCCCACCAATGCTTCAGGCTGGC...TACAAGACTGCAAACCCGAACCTGTTGTCTGAACTTTGTTGTTTTATAAGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS-3UTR CCA 90 bp | AGGTCTGCATCACAGTATTGGTACAAATGCACTCAGTGCGTTTTCTTCCCTGTGGCCAACTTAGGCTTCTaGGAATATTTTGTTAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: RSASQYWYKCTQCVFFPVANLGF*EYFVKF Trigger: GAATTTAACAAAATATTCCCAGAAGCCTAAGTTGGC...CACAGGGAAGAAAACGCACTGAGTGCATTTGTACCAATACTGTGATGCAGACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS-3UTR GCA 90 bp | TTACCTTATAAAACAACAAAGTTCAGACAACAGGTTCGGGTTTGCAGTCTTGTAAAGTGCTGCTTCAGCTaGTTAATTAAGTGCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPYKTTKFRQQVRVCSLVKCCFS*LIKCCV Trigger: CACACAGCACTTAATTAAGCAGCTGAAGCAGCACTT...TACAAGACTGCAAACCCGAACCTGTTGTCTGAACTTTGTTGTTTTATAAGGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS-3UTR GCA 90 bp | CCTGTTTTTCTAGTGTTACCTTATAAAACAACAAAGTTCAGACAACAGGTTCGGAAGTGCTGCTTCAGCTaGTTAATTAAGTGCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PVFLVLPYKTTKFRQQVRKCCFS*LIKCCV Trigger: CACACAGCACTTAATTAAGCAGCTGAAGCAGCACTT...CCGAACCTGTTGTCTGAACTTTGTTGTTTTATAAGGTAACACTAGAAAAACAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS-3UTR CCA 90 bp | CCTGTTTTTCTAGTGTTACCTTATAAAACAACAAAGTTCAGACAACAGGTTCGGTCAGCAATTCCTTCCTaGTCCACATCAATTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PVFLVLPYKTTKFRQQVRSAIPS*STSISS Trigger: AGATGAAATTGATGTGGACCAGGAAGGAATTGCTGA...CCGAACCTGTTGTCTGAACTTTGTTGTTTTATAAGGTAACACTAGAAAAACAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS GCA 90 bp | GAGCGCGCGTGCCTGTTCAACGTGACCCTTCCGCATCTCCAGCACTaGCAGGTTGTTGTAGGCTTCAGCATGGTGGTTGTTGTGGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: ERACLFNVTLPHLQH*QVVVGFSMVVVVDQ Trigger: CTGGTCCACAACAACCACCATGCTGAAGCCTACAACAACCTGGCAGTGCTGGAGATGCGGAAGGGTCACGTTGAACAGGCACGCGCGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS CCA 90 bp | GCTTCAGCATGGTGGTTGTTGTGGACCAGGGCCAGCCTGAAGCATTaGTGGGCCAAGTTTGTATCTCCGATTCCCACAGCTATGTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ASAWWLLWTRASLKH*WAKFVSPIPTAMCP Trigger: GGGGCACATAGCTGTGGGAATCGGAGATACAAACTTGGCCCACCAATGCTTCAGGCTGGCCCTGGTCCACAACAACCACCATGCTGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS-3UTR CAA 90 bp | ATGCACTCAGTGCGTTTTCTTCCCTGTGCGCTGGCCCTCCGTGAAGGCTTATGTAGTCGGTCCTCCTGTTaGGTTAGTGCCAGGGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: MHSVRFLPCALALREGLCSRSSC*VSAREL Trigger: AAGCTCCCTGGCACTAACCAAACAGGAGGACCGACT...ACATAAGCCTTCACGGAGGGCCAGCGCACAGGGAAGAAAACGCACTGAGTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS-3UTR CAA 90 bp | GTACAAATGCACTCAGTGCGTTTTCTTCCCTGTGCGCTGGCCCTCCGTGAAGGCTATGGGTCTTCCAGCTaGAGTGATTGGCCTGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: VQMHSVRFLPCALALREGYGSSS*SDWPDS Trigger: GCTGTCAGGCCAATCACTCAAGCTGGAAGACCCATA...GCCTTCACGGAGGGCCAGCGCACAGGGAAGAAAACGCACTGAGTGCATTTGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS CCA 90 bp | GCTGGGCCTAAGGAAACCTGTTATGGGTCTTCCAGCTTGAGTGATTaGCCTGACAGCTTGAGTCGGTCCTCCTGTTTGGTTAGTGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AGPKETCYGSSSLSD*PDSLSRSSCLVSAR Trigger: CCTGGCACTAACCAAACAGGAGGACCGACTCAAGCTGTCAGGCCAATCACTCAAGCTGGAAGACCCATAACAGGTTTCCTTAGGCCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 ENSMUST00000132878.2 |
||
| CDS TCA 90 bp | TGTTGTAGGCTTCAGCATGGTGGTTGTTGTGGACCAGGGCCAGCCTaGAGCATTGGTGGGCCAAGTTTGTATCTCCGATTCCCACAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: CCRLQHGGCCGPGPA*SIGGPSLYLRFPQL Trigger: TAGCTGTGGGAATCGGAGATACAAACTTGGCCCACCAATGCTTCAGGCTGGCCCTGGTCCACAACAACCACCATGCTGAAGCCTACAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS CCA 90 bp | CTCTGTCAGCGCCCGTGCTTTCAAAATCCAAGCCGCCTGAGACACTaGCAAATCAGGAGCTGGTTCCTGATCATAAGGGGATTTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LCQRPCFQNPSRLRH*QIRSWFLIIRGFLQ Trigger: CTGGAGAAATCCCCTTATGATCAGGAACCAGCTCCTGATTTGCCAGTGTCTCAGGCGGCTTGGATTTTGAAAGCACGGGCGCTGACAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079146.13 |
||
| CDS CCA 90 bp | AACTCCCATCTGCAAGAGGCGCCTGTAAAACCGAAGGGCAACCTCTaGCTGGTCAGAATAAAAGTGGTTGCTTCCAATGCAGGCGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: NSHLQEAPVKPKGNL*LVRIKVVASNAGDG Trigger: GCCATCGCCTGCATTGGAAGCAACCACTTTTATTCTGACCAGCCAGAGGTTGCCCTTCGGTTTTACAGGCGCCTCTTGCAGATGGGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS GCA 90 bp | TCCGATTCCCACAGCTATGTGCCCCAGGTTGTACCAGACATCAGCTaGCTCTTCTTCATTTTCAGCCAGGGAAAGGGCACGTTCAAACGA | + |
|
Preference number: 5 (lower is better) Translates to: SDSHSYVPQVVPDIS*LFFIFSQGKGTFKR Trigger: TCGTTTGAACGTGCCCTTTCCCTGGCTGAAAATGAAGAAGAGGCAGCTGATGTCTGGTACAACCTGGGGCACATAGCTGTGGGAATCGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS-3UTR CAA 90 bp | ACAACAGGTTCGGGTTTGCAGTCTTGTAGGATGCCTTATGAGGTCTGCATCACAGCTATGTGCCCCAGGTaGTACCAGACATCAGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TTGSGLQSCRMPYEVCITAMCPR*YQTSAA Trigger: GGCAGCTGATGTCTGGTACAACCTGGGGCACATAGC...TGTGATGCAGACCTCATAAGGCATCCTACAAGACTGCAAACCCGAACCTGTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS-3UTR CAA 90 bp | GCATCACAGTATTGGTACAAATGCACTCAGTGCGTTTTCTTCCCTGTGCGCTGGTATGGGTCTTCCAGCTaGAGTGATTGGCCTGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: ASQYWYKCTQCVFFPVRWYGSSS*SDWPDS Trigger: GCTGTCAGGCCAATCACTCAAGCTGGAAGACCCATA...CCAGCGCACAGGGAAGAAAACGCACTGAGTGCATTTGTACCAATACTGTGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS TCA 90 bp | TGGTTAGTGCCAGGGAGCTTCAAAGATGTGCCAGGGCGTGGGACCTaGGCAATAGCATTTTCATCCAGGATCATTTCAGCAATTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: WLVPGSFKDVPGRGT*AIAFSSRIISAIPS Trigger: GGAAGGAATTGCTGAAATGATCCTGGATGAAAATGCTATTGCTCAGGTCCCACGCCCTGGCACATCTTTGAAGCTCCCTGGCACTAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 ENSMUST00000132878.2 |
||
| CDS GCA 90 bp | GTCCACATCAATTTCATCTATGTACACCATCTCTGTCAGCGCCCGTaGTTTCAAAATCCAAGCCGCCTGAGACACTGGCAAATCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VHINFIYVHHLCQRP*FQNPSRLRHWQIRS Trigger: GCTCCTGATTTGCCAGTGTCTCAGGCGGCTTGGATTTTGAAAGCACGGGCGCTGACAGAGATGGTGTACATAGATGAAATTGATGTGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079146.13 |
||
| CDS CCA 90 bp | TCCTGTTTGGTTAGTGCCAGGGAGCTTCAAAGATGTGCCAGGGCGTaGGACCTGAGCAATAGCATTTTCATCCAGGATCATTTCAGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SCLVSARELQRCARA*DLSNSIFIQDHFSN Trigger: ATTGCTGAAATGATCCTGGATGAAAATGCTATTGCTCAGGTCCCACGCCCTGGCACATCTTTGAAGCTCCCTGGCACTAACCAAACAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 ENSMUST00000132878.2 |
||
| CDS CCA 90 bp | ATCTTATCAGAGACTGTTGCGAAATTAAAGTGTGGCTCATACATGTaGGGTGCCAAAGACGATGCGGTTTGTAAGAGCGCGCGTGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ILSETVAKLKCGSYM*GAKDDAVCKSARAC Trigger: ACAGGCACGCGCGCTCTTACAAACCGCATCGTCTTTGGCACCCCACATGTATGAGCCACACTTTAATTTCGCAACAGTCTCTGATAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS-3UTR CAA 90 bp | AGGTCTGCATCACAGTATTGGTACAAATGCACTCAGTGCGTTTTCTTCCCTGTGCAGCACAGGCCCAGGTaGTTGAAAAGCTGGCAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: RSASQYWYKCTQCVFFPVQHRPR*LKSWQL Trigger: TAACTGCCAGCTTTTCAACAACCTGGGCCTGTGCTG...CACAGGGAAGAAAACGCACTGAGTGCATTTGTACCAATACTGTGATGCAGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS GCA 90 bp | GTCCACATCAATTTCATCTATGTACACCATCTCTGTCAGCGCCCGTaGTTTCAAAATCCAAGCCGCCTGATCATAAGGGGATTTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VHINFIYVHHLCQRP*FQNPSRLIIRGFLQ Trigger: CTGGAGAAATCCCCTTATGATCAGGCGGCTTGGATTTTGAAAGCACGGGCGCTGACAGAGATGGTGTACATAGATGAAATTGATGTGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085109.10 |
||
| CDS GCA 90 bp | GAAGGGCAACCTCTGGCTGGTCAGAATAAAAGTGGTTGCTTCCAATaGAGGCGATGGCTTCCACGTGAGTATTGTCTTGTTTTAGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: EGQPLAGQNKSGCFQ*RRWLPREYCLVLEL Trigger: AAGTTCTAAAACAAGACAATACTCACGTGGAAGCCATCGCCTGCATTGGAAGCAACCACTTTTATTCTGACCAGCCAGAGGTTGCCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS-3UTR CAA 90 bp | TTACCTTATAAAACAACAAAGTTCAGACAACAGGTTCGGGTTTGCAGTCTTGTAGCTATGTGCCCCAGGTaGTACCAGACATCAGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LPYKTTKFRQQVRVCSLVAMCPR*YQTSAA Trigger: GGCAGCTGATGTCTGGTACAACCTGGGGCACATAGC...TACAAGACTGCAAACCCGAACCTGTTGTCTGAACTTTGTTGTTTTATAAGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS-3UTR CAA 90 bp | CCTGTTTTTCTAGTGTTACCTTATAAAACAACAAAGTTCAGACAACAGGTTCGGAGTCGGTCCTCCTGTTaGGTTAGTGCCAGGGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PVFLVLPYKTTKFRQQVRSRSSC*VSAREL Trigger: AAGCTCCCTGGCACTAACCAAACAGGAGGACCGACT...CCGAACCTGTTGTCTGAACTTTGTTGTTTTATAAGGTAACACTAGAAAAACAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS-3UTR CAA 90 bp | CCTGTTTTTCTAGTGTTACCTTATAAAACAACAAAGTTCAGACAACAGGTTCGGGGCCAGCCTGAAGCATaGGTGGGCCAAGTTTGTATC | + |
|
Preference number: 5 (lower is better) Translates to: PVFLVLPYKTTKFRQQVRGQPEA*VGQVCI Trigger: GATACAAACTTGGCCCACCAATGCTTCAGGCTGGCC...CCGAACCTGTTGTCTGAACTTTGTTGTTTTATAAGGTAACACTAGAAAAACAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS CCA 90 bp | AGTACTCTGCTGCAGATGAACTGTTATTCATTTCCTCATAGATCCTaGCAATTCCACAAAGCAGGGTCACCTCTCCTGGAAACTTATCTA | + |
|
Preference number: 5 (lower is better) Translates to: STLLQMNCYSFPHRS*QFHKAGSPLLETYL Trigger: TAGATAAGTTTCCAGGAGAGGTGACCCTGCTTTGTGGAATTGCCAGGATCTATGAGGAAATGAATAACAGTTCATCTGCAGCAGAGTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS TCA 72 bp | GATGCGGTTTGTAAGAGCGCGCGTGCCTGTTCAACGTaGCCCTTCCGCATCTCCAGCACTGCCAGGTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: DAVCKSARACST*PFRISSTARLL Trigger: CAACAACCTGGCAGTGCTGGAGATGCGGAAGGGTCACGTTGAACAGGCACGCGCGCTCTTACAAACCGCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS CAA 90 bp | TCCAGCTTGAGTGATTGGCCTGACAGCTTGAGTCGGTCCTCCTGTTaGGTTAGTGCCAGGGAGCTTCAAAGATGTGCCAGGGCGTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SSLSDWPDSLSRSSC*VSARELQRCARAWD Trigger: GTCCCACGCCCTGGCACATCTTTGAAGCTCCCTGGCACTAACCAAACAGGAGGACCGACTCAAGCTGTCAGGCCAATCACTCAAGCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 ENSMUST00000132878.2 |
||
| CDS CAA 90 bp | GGCTTCAGCATGGTGGTTGTTGTGGACCAGGGCCAGCCTGAAGCATaGGTGGGCCAAGTTTGTATCTCCGATTCCCACAGCTATGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: GFSMVVVVDQGQPEA*VGQVCISDSHSYVP Trigger: GGGCACATAGCTGTGGGAATCGGAGATACAAACTTGGCCCACCAATGCTTCAGGCTGGCCCTGGTCCACAACAACCACCATGCTGAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
||
| CDS GCA 72 bp | CCGCCTGATCATAAGGGGATTTCTCCAGCATCTGCGTaGATAGATCGGCGCAGAGCTGGAACTTCCTGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: PPDHKGISPASA*IDRRRAGTSCV Trigger: GACGCAGGAAGTTCCAGCTCTGCGCCGATCTATGCACGCAGATGCTGGAGAAATCCCCTTATGATCAGGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085109.10 |
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| CDS CCA 72 bp | TGGTGGTTGTTGTGGACCAGGGCCAGCCTGAAGCATTaGTGGGCCAAGTTTGTATCTCCGATTCCCACAGCT | + |
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Preference number: 6 (lower is better) Translates to: WWLLWTRASLKH*WAKFVSPIPTA Trigger: AGCTGTGGGAATCGGAGATACAAACTTGGCCCACCAATGCTTCAGGCTGGCCCTGGTCCACAACAACCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS CAA 72 bp | GCTGGGCCTAAGGAAACCTGTTATGGGTCTTCCAGCTaGAGTGATTGGCCTGACAGCTTGAGTCGGTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: AGPKETCYGSSS*SDWPDSLSRSS Trigger: GGAGGACCGACTCAAGCTGTCAGGCCAATCACTCAAGCTGGAAGACCCATAACAGGTTTCCTTAGGCCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 ENSMUST00000132878.2 |
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| CDS CAA 72 bp | ATGGTGGTTGTTGTGGACCAGGGCCAGCCTGAAGCATaGGTGGGCCAAGTTTGTATCTCCGATTCCCACAGC | + |
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Preference number: 6 (lower is better) Translates to: MVVVVDQGQPEA*VGQVCISDSHS Trigger: GCTGTGGGAATCGGAGATACAAACTTGGCCCACCAATGCTTCAGGCTGGCCCTGGTCCACAACAACCACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS TCA 72 bp | CTTCAGCATGGTGGTTGTTGTGGACCAGGGCCAGCCTaGAGCATTGGTGGGCCAAGTTTGTATCTCCGATTC | + |
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Preference number: 6 (lower is better) Translates to: LQHGGCCGPGPA*SIGGPSLYLRF Trigger: GAATCGGAGATACAAACTTGGCCCACCAATGCTTCAGGCTGGCCCTGGTCCACAACAACCACCATGCTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS GCA 72 bp | GTTCCTGATCATAAGGGGATTTCTCCAGCATCTGCGTaGATAGATCGGCGCAGAGCTGGAACTTCCTGCGTC | + |
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Preference number: 6 (lower is better) Translates to: VPDHKGISPASA*IDRRRAGTSCV Trigger: GACGCAGGAAGTTCCAGCTCTGCGCCGATCTATGCACGCAGATGCTGGAGAAATCCCCTTATGATCAGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079146.13 |
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| CDS GCA 72 bp | TGCCTGTTCAACGTGACCCTTCCGCATCTCCAGCACTaGCAGGTTGTTGTAGGCTTCAGCATGGTGGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: CLFNVTLPHLQH*QVVVGFSMVVV Trigger: AACAACCACCATGCTGAAGCCTACAACAACCTGGCAGTGCTGGAGATGCGGAAGGGTCACGTTGAACAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS CAA 72 bp | AGTGATTGGCCTGACAGCTTGAGTCGGTCCTCCTGTTaGGTTAGTGCCAGGGAGCTTCAAAGATGTGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SDWPDSLSRSSC*VSARELQRCAR Trigger: CCTGGCACATCTTTGAAGCTCCCTGGCACTAACCAAACAGGAGGACCGACTCAAGCTGTCAGGCCAATCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 ENSMUST00000132878.2 |
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| CDS CAA 90 bp | ACTCTGTGTGCTGGGCCTAAGGAAACCTGTTATGGGTCTTCCAGCTaGAGTGATTGGCCTGACAGCTTGAGTCGGTCCTCCTGTTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: TLCAGPKETCYGSSS*SDWPDSLSRSSCLV Trigger: AACCAAACAGGAGGACCGACTCAAGCTGTCAGGCCAATCACTCAAGCTGGAAGACCCATAACAGGTTTCCTTAGGCCCAGCACACAGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 ENSMUST00000132878.2 |
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| CDS TCA 72 bp | CCAGGGAGCTTCAAAGATGTGCCAGGGCGTGGGACCTaGGCAATAGCATTTTCATCCAGGATCATTTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: PGSFKDVPGRGT*AIAFSSRIISA Trigger: TGCTGAAATGATCCTGGATGAAAATGCTATTGCTCAGGTCCCACGCCCTGGCACATCTTTGAAGCTCCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 ENSMUST00000132878.2 |
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| CDS TCA 72 bp | CATGGAAGCAGTCCCCAGTCTGACGAATCTTCCAGATaGGCTAGTGATAGGTCGTGCTGTGTAGGCAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: HGSSPQSDESSR*ASDRSCCVGSS Trigger: AGAACTGCCTACACAGCACGACCTATCACTAGCTCATCTGGAAGATTCGTCAGACTGGGGACTGCTTCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 ENSMUST00000132878.2 |
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| CDS CCA 72 bp | AATCCAAGCCGCCTGAGACACTGGCAAATCAGGAGCTaGTTCCTGATCATAAGGGGATTTCTCCAGCATCTG | + |
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Preference number: 6 (lower is better) Translates to: NPSRLRHWQIRS*FLIIRGFLQHL Trigger: CAGATGCTGGAGAAATCCCCTTATGATCAGGAACCAGCTCCTGATTTGCCAGTGTCTCAGGCGGCTTGGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079146.13 |
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| CDS CCA 72 bp | GTTAGTGCCAGGGAGCTTCAAAGATGTGCCAGGGCGTaGGACCTGAGCAATAGCATTTTCATCCAGGATCAT | + |
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Preference number: 6 (lower is better) Translates to: VSARELQRCARA*DLSNSIFIQDH Trigger: ATGATCCTGGATGAAAATGCTATTGCTCAGGTCCCACGCCCTGGCACATCTTTGAAGCTCCCTGGCACTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 ENSMUST00000132878.2 |
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| CDS CCA 72 bp | CTGCAAGAGGCGCCTGTAAAACCGAAGGGCAACCTCTaGCTGGTCAGAATAAAAGTGGTTGCTTCCAATGCA | + |
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Preference number: 6 (lower is better) Translates to: LQEAPVKPKGNL*LVRIKVVASNA Trigger: TGCATTGGAAGCAACCACTTTTATTCTGACCAGCCAGAGGTTGCCCTTCGGTTTTACAGGCGCCTCTTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS CCA 72 bp | AAGGAAACCTGTTATGGGTCTTCCAGCTTGAGTGATTaGCCTGACAGCTTGAGTCGGTCCTCCTGTTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: KETCYGSSSLSD*PDSLSRSSCLV Trigger: AACCAAACAGGAGGACCGACTCAAGCTGTCAGGCCAATCACTCAAGCTGGAAGACCCATAACAGGTTTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 ENSMUST00000132878.2 |
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| CDS CCA 72 bp | GAGACTGTTGCGAAATTAAAGTGTGGCTCATACATGTaGGGTGCCAAAGACGATGCGGTTTGTAAGAGCGCG | + |
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Preference number: 6 (lower is better) Translates to: ETVAKLKCGSYM*GAKDDAVCKSA Trigger: CGCGCTCTTACAAACCGCATCGTCTTTGGCACCCCACATGTATGAGCCACACTTTAATTTCGCAACAGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS GCA 72 bp | AATTTCATCTATGTACACCATCTCTGTCAGCGCCCGTaGTTTCAAAATCCAAGCCGCCTGAGACACTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: NFIYVHHLCQRP*FQNPSRLRHWQ Trigger: TTGCCAGTGTCTCAGGCGGCTTGGATTTTGAAAGCACGGGCGCTGACAGAGATGGTGTACATAGATGAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079146.13 |
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| CDS GCA 72 bp | CCTCTGGCTGGTCAGAATAAAAGTGGTTGCTTCCAATaGAGGCGATGGCTTCCACGTGAGTATTGTCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: PLAGQNKSGCFQ*RRWLPREYCLV Trigger: AACAAGACAATACTCACGTGGAAGCCATCGCCTGCATTGGAAGCAACCACTTTTATTCTGACCAGCCAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS GCA 72 bp | AGCATAGCAAAGTGCTGCTTCAGCTGCTTAATTAAGTaGTGTGTGTCCACGTGTTCAGGAAACGCCACTTCA | + |
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Preference number: 6 (lower is better) Translates to: SIAKCCFSCLIK*CVSTCSGNATS Trigger: TGAAGTGGCGTTTCCTGAACACGTGGACACACAGCACTTAATTAAGCAGCTGAAGCAGCACTTTGCTATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS GCA 72 bp | AATTTCATCTATGTACACCATCTCTGTCAGCGCCCGTaGTTTCAAAATCCAAGCCGCCTGATCATAAGGGGA | + |
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Preference number: 6 (lower is better) Translates to: NFIYVHHLCQRP*FQNPSRLIIRG Trigger: TCCCCTTATGATCAGGCGGCTTGGATTTTGAAAGCACGGGCGCTGACAGAGATGGTGTACATAGATGAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085109.10 |
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| CDS CAA 72 bp | TTTGTATCTCCGATTCCCACAGCTATGTGCCCCAGGTaGTACCAGACATCAGCTGCCTCTTCTTCATTTTCA | + |
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Preference number: 6 (lower is better) Translates to: FVSPIPTAMCPR*YQTSAASSSFS Trigger: TGAAAATGAAGAAGAGGCAGCTGATGTCTGGTACAACCTGGGGCACATAGCTGTGGGAATCGGAGATACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS CCA 72 bp | GGTCAGAATAAAAGTGGTTGCTTCCAATGCAGGCGATaGCTTCCACGTGAGTATTGTCTTGTTTTAGAACTT | + |
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Preference number: 6 (lower is better) Translates to: GQNKSGCFQCRR*LPREYCLVLEL Trigger: AAGTTCTAAAACAAGACAATACTCACGTGGAAGCCATCGCCTGCATTGGAAGCAACCACTTTTATTCTGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS CCA 72 bp | GCATTTTCATCCAGGATCATTTCAGCAATTCCTTCCTaGTCCACATCAATTTCATCTATGTACACCATCTCT | + |
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Preference number: 6 (lower is better) Translates to: AFSSRIISAIPS*STSISSMYTIS Trigger: AGAGATGGTGTACATAGATGAAATTGATGTGGACCAGGAAGGAATTGCTGAAATGATCCTGGATGAAAATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 |
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| CDS CCA 72 bp | GACGCCAAATCCAAAGCCATCTTAACATCGTTTTCATaGTGGAGAATATATTCAAATAGAGCCTTTGCCAAC | + |
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Preference number: 6 (lower is better) Translates to: DAKSKAILTSFS*WRIYSNRAFAN Trigger: GTTGGCAAAGGCTCTATTTGAATATATTCTCCACCATGAAAACGATGTTAAGATGGCTTTGGATTTGGCGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 ENSMUST00000132878.2 |
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| CDS CCA 72 bp | GCCAAATCCAAAGCCATCTTAACATCGTTTTCATGGTaGAGAATATATTCAAATAGAGCCTTTGCCAACTTA | + |
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Preference number: 6 (lower is better) Translates to: AKSKAILTSFSW*RIYSNRAFANL Trigger: TAAGTTGGCAAAGGCTCTATTTGAATATATTCTCCACCATGAAAACGATGTTAAGATGGCTTTGGATTTGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079146.13 ENSMUST00000085109.10 ENSMUST00000132878.2 |
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