Pregenerated sensors for TTC5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006288Ensembl transcript IDs: ENSMUST00000006451.8, ENSMUST00000226768.2, ENSMUST00000227751.2, ENSMUST00000228440.2
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTaGGTTCCAGGACTGCCAGGGCTACAGAGAAAGCCTGTCTCGAAA | + |
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Preference number: 1 (lower is better) Translates to: EAGGFLSSRPAWSTE*VPGLPGLQRKPVSK Trigger: TTTCGAGACAGGCTTTCTCTGTAGCCCTGGCAGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| 3UTR GCA 90 bp | GTCATTCACACTGCGGCCTTGAAGCTACTGTGGCAGAGGCTTGACTaGTGGAGTTCTGTGGCTTTCCATTCACCACCAGCAGAAGAGGCG | + |
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Preference number: 1 (lower is better) Translates to: VIHTAALKLLWQRLD*WSSVAFHSPPAEEA Trigger: CGCCTCTTCTGCTGGTGGTGAATGGAAAGCCACAGAACTCCAGCAGTCAAGCCTCTGCCACAGTAGCTTCAAGGCCGCAGTGTGAATGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227751.2 |
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| 3UTR GCA 90 bp | GATACTTCTCCACACCCTCTGCTTCAATTCCTGTCTCCAGGTTCCTaGCTTGAGTTCCTGCCCCAGCTTCCCTTCACAGTGGATGACAAG | + |
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Preference number: 1 (lower is better) Translates to: DTSPHPLLQFLSPGS*LEFLPQLPFTVDDK Trigger: CTTGTCATCCACTGTGAAGGGAAGCTGGGGCAGGAACTCAAGGCAGGAACCTGGAGACAGGAATTGAAGCAGAGGGTGTGGAGAAGTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| 3UTR CCA 90 bp | GCTTTCCATTCACCACCAGCAGAAGAGGCGTTTCCACACGCACGCTaGAGAAGGAATAGTCCTTTCCCTTGTGCCGGATTTGATGATGCC | + |
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Preference number: 1 (lower is better) Translates to: AFHSPPAEEAFPHAR*RRNSPFPCAGFDDA Trigger: GGCATCATCAAATCCGGCACAAGGGAAAGGACTATTCCTTCTCCAGCGTGCGTGTGGAAACGCCTCTTCTGCTGGTGGTGAATGGAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227751.2 |
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| 3UTR CCA 90 bp | ATTCACACTGCGGCCTTGAAGCTACTGTGGCAGAGGCTTGACTGCTaGAGTTCTGTGGCTTTCCATTCACCACCAGCAGAAGAGGCGTTT | + |
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Preference number: 1 (lower is better) Translates to: IHTAALKLLWQRLDC*SSVAFHSPPAEEAF Trigger: AAACGCCTCTTCTGCTGGTGGTGAATGGAAAGCCACAGAACTCCAGCAGTCAAGCCTCTGCCACAGTAGCTTCAAGGCCGCAGTGTGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227751.2 |
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| 3UTR CCA 90 bp | CATTGCCTCTACAAGGTCATTCACACTGCGGCCTTGAAGCTACTGTaGCAGAGGCTTGACTGCTGGAGTTCTGTGGCTTTCCATTCACCA | + |
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Preference number: 1 (lower is better) Translates to: HCLYKVIHTAALKLL*QRLDCWSSVAFHSP Trigger: TGGTGAATGGAAAGCCACAGAACTCCAGCAGTCAAGCCTCTGCCACAGTAGCTTCAAGGCCGCAGTGTGAATGACCTTGTAGAGGCAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227751.2 |
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| 3UTR GCA 90 bp | TCCCCATTTCCAACTCGCAGGGTGAGCTTAGCTATGAGACTTCATTaGCTCTACAAGGTCATTCACACTGCGGCCTTGAAGCTACTGTGG | + |
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Preference number: 1 (lower is better) Translates to: SPFPTRRVSLAMRLH*LYKVIHTAALKLLW Trigger: CCACAGTAGCTTCAAGGCCGCAGTGTGAATGACCTTGTAGAGGCAATGAAGTCTCATAGCTAAGCTCACCCTGCGAGTTGGAAATGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227751.2 |
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| 3UTR CCA 90 bp | GAGGCAGGAAGAATAAACAAGGGTCCCAATGGCTCTGAAGAGGGCTaGAATACAGCAGGGAAAAGGAAAGAGACTCAACTATGTTCCAGG | + |
|
Preference number: 1 (lower is better) Translates to: EAGRINKGPNGSEEG*NTAGKRKETQLCSR Trigger: CCTGGAACATAGTTGAGTCTCTTTCCTTTTCCCTGCTGTATTCCAGCCCTCTTCAGAGCCATTGGGACCCTTGTTTATTCTTCCTGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
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| 3UTR CCA 90 bp | CTTATAACTGGAGTTACAGATAGCTGTGAGCTGCCCTGTGAGTGCTaGGAATTGAACCTGGATCCTTTGGAAGAGCAGCCAGTGCTCTTA | + |
|
Preference number: 1 (lower is better) Translates to: LITGVTDSCELPCEC*ELNLDPLEEQPVLL Trigger: TAAGAGCACTGGCTGCTCTTCCAAAGGATCCAGGTTCAATTCCCAGCACTCACAGGGCAGCTCACAGCTATCTGTAACTCCAGTTATAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| 3UTR TCA 90 bp | ATTGGACTACAGGTGTATCTGTGGGGCATTTTCTTGATTAGTGACTaGTATGAGAGGATTCAACCTCCTGTGGACAATGCCACACCTGGA | + |
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Preference number: 1 (lower is better) Translates to: IGLQVYLWGIFLISD*YERIQPPVDNATPG Trigger: TCCAGGTGTGGCATTGTCCACAGGAGGTTGAATCCTCTCATATCAGTCACTAATCAAGAAAATGCCCCACAGATACACCTGTAGTCCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| 3UTR CCA 90 bp | ACACCTCAGTGGGTAAGAGTACCTAGGAATGTTGTTAATGTCTTCTaGCATCCACATGTGCACAGGCAATCACAAATGCATACACCATGC | + |
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Preference number: 1 (lower is better) Translates to: TPQWVRVPRNVVNVF*HPHVHRQSQMHTPC Trigger: GCATGGTGTATGCATTTGTGATTGCCTGTGCACATGTGGATGCCAGAAGACATTAACAACATTCCTAGGTACTCTTACCCACTGAGGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| 3UTR CCA 90 bp | GCAGTTCATCAAAGTAAGTTTAGAGGTGCTGAAGAAACACCTCAGTaGGTAAGAGTACCTAGGAATGTTGTTAATGTCTTCTGGCATCCA | + |
|
Preference number: 1 (lower is better) Translates to: AVHQSKFRGAEETPQ*VRVPRNVVNVFWHP Trigger: TGGATGCCAGAAGACATTAACAACATTCCTAGGTACTCTTACCCACTGAGGTGTTTCTTCAGCACCTCTAAACTTACTTTGATGAACTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| 3UTR CAA 90 bp | CACACGCACGCTGGAGAAGGAATAGTCCTTTCCCTTGTGCCGGATTaGATGATGCCGAAGGTTGGGCTCAGGAATAGCTACAGAGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: HTHAGEGIVLSLVPD*MMPKVGLRNSYRVP Trigger: GGGGACTCTGTAGCTATTCCTGAGCCCAACCTTCGGCATCATCAAATCCGGCACAAGGGAAAGGACTATTCCTTCTCCAGCGTGCGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227751.2 |
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| 3UTR CAA 90 bp | AGCTGTGAGCTGCCCTGTGAGTGCTGGGAATTGAACCTGGATCCTTaGGAAGAGCAGCCAGTGCTCTTAACCACTAAGCCATCTCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: SCELPCECWELNLDP*EEQPVLLTTKPSLQ Trigger: CTGGAGAGATGGCTTAGTGGTTAAGAGCACTGGCTGCTCTTCCAAAGGATCCAGGTTCAATTCCCAGCACTCACAGGGCAGCTCACAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| 3UTR-3UTR TCA 90 bp | CGCAGGGTGAGCTTAGCTATGAGACTTCATTGCCTCTACAAGGTCATTCACACTCTACAGAGTCCCCGATaGGCACTCCCCAGCTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: RRVSLAMRLHCLYKVIHTLQSPR*ALPSSA Trigger: TGCAGAGCTGGGGAGTGCTCATCGGGGACTCTGTAG...AGTGTGAATGACCTTGTAGAGGCAATGAAGTCTCATAGCTAAGCTCACCCTGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227751.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGGTCTCACCAATGTAGCCCTGGTTGGCCTCAAACTAACAAAGGTCCACCTGGGATTCAACCTCCTGTaGACAATGCCACACCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: QGLTNVALVGLKLTKVHLGFNLL*TMPHLD Trigger: GTCCAGGTGTGGCATTGTCCACAGGAGGTTGAATCC...CAGGTGGACCTTTGTTAGTTTGAGGCCAACCAGGGCTACATTGGTGAGACCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| 3UTR CAA 90 bp | GCTATGAGACTTCATTGCCTCTACAAGGTCATTCACACTGCGGCCTaGAAGCTACTGTGGCAGAGGCTTGACTGCTGGAGTTCTGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: AMRLHCLYKVIHTAA*KLLWQRLDCWSSVA Trigger: AGCCACAGAACTCCAGCAGTCAAGCCTCTGCCACAGTAGCTTCAAGGCCGCAGTGTGAATGACCTTGTAGAGGCAATGAAGTCTCATAGC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227751.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTACATACATATTGGACTCAGGAAGGAGGCGAGAACAGGGATCTCGTGGACTGGGTCCCAATGGCTCTaGAGAGGGCTGGAATACAGC | + |
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Preference number: 2 (lower is better) Translates to: MYIHIGLRKEARTGISWTGSQWL*RGLEYS Trigger: GCTGTATTCCAGCCCTCTTCAGAGCCATTGGGACCC...AGTCCACGAGATCCCTGTTCTCGCCTCCTTCCTGAGTCCAATATGTATGTACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
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| 3UTR-3UTR CCA 90 bp | CACCCTCTGCTTCAATTCCTGTCTCCAGGTTCCTGCCTTGAGTTCCTGCCCCAGGAAGAAACACCTCAGTaGGTAAGAGTACCTAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: HPLLQFLSPGSCLEFLPQEETPQ*VRVPRN Trigger: ATTCCTAGGTACTCTTACCCACTGAGGTGTTTCTTC...CTGGGGCAGGAACTCAAGGCAGGAACCTGGAGACAGGAATTGAAGCAGAGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| 3UTR-3UTR GCA 90 bp | GTCACAACACTGGACAAAATGACTCTCCCACCCCCAACCACCATTAACTGCCTACTTCTCCACACCCTCTaGTTCAATTCCTGTCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: VTTLDKMTLPPPTTINCLLLHTL*FNSCLQ Trigger: CTGGAGACAGGAATTGAAGCAGAGGGTGTGGAGAAG...TAGGCAGTTAATGGTGGTTGGGGGTGGGAGAGTCATTTTGTCCAGTGTTGTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| 3UTR-3UTR GCA 90 bp | AGCAGCAGAAGGCAAAGGAGGACTTCTGCACTGCTTACAGGGAAACATACGCTTTCTGGCATCCACATGTaGACAGGCAATCACAAATGC | + |
|
Preference number: 2 (lower is better) Translates to: SSRRQRRTSALLTGKHTLSGIHM*TGNHKC Trigger: GCATTTGTGATTGCCTGTGCACATGTGGATGCCAGA...AAGCGTATGTTTCCCTGTAAGCAGTGCAGAAGTCCTCCTTTGCCTTCTGCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCACCAAATTGGACTACAGGTGTATCTGTGGGGCATTTTCTTGATTAGTGACAGTGAGTTCCAGGACTaGCAGGGCTACAGAGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: LHQIGLQVYLWGIFLISDSEFQD*QGYRES Trigger: GCTTTCTCTGTAGCCCTGGCAGTCCTGGAACTCACT...GTCACTAATCAAGAAAATGCCCCACAGATACACCTGTAGTCCAATTTGGTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGTAAGAGTACCTAGGAATGTTGTTAATGTCTTCTGGCATCCACATGTGCACGTCAGACAACACAGCTaGACTCCAGGTGACTCTAGT | + |
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Preference number: 2 (lower is better) Translates to: WVRVPRNVVNVFWHPHVHVRQHS*TPGDSS Trigger: ACTAGAGTCACCTGGAGTCCAGCTGTGTTGTCTGAC...GTGCACATGTGGATGCCAGAAGACATTAACAACATTCCTAGGTACTCTTACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| 3UTR-3UTR TCA 90 bp | CATACATATTGGACTCAGGAAGGAGGCGAGAACAGGGATCTCGTGGACTGTCAAGTCCCAACAGTTCTATaGGTTCTTTGCTCTTTAAGT | + |
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Preference number: 2 (lower is better) Translates to: HTYWTQEGGENRDLVDCQVPTVL*VLCSLS Trigger: ACTTAAAGAGCAAAGAACTCATAGAACTGTTGGGAC...TTGACAGTCCACGAGATCCCTGTTCTCGCCTCCTTCCTGAGTCCAATATGTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
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| 3UTR-3UTR CCA 90 bp | ATAAATGCTTTCCTCCCAGTGCTTCTGGTCATGATGGTCATCACAGCAGCAGAAGTTGTTAATGTCTTCTaGCATCCACATGTGCACAGG | + |
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Preference number: 2 (lower is better) Translates to: INAFLPVLLVMMVITAAEVVNVF*HPHVHR Trigger: CCTGTGCACATGTGGATGCCAGAAGACATTAACAAC...TTCTGCTGCTGTGATGACCATCATGACCAGAAGCACTGGGAGGAAAGCATTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| 3UTR-3UTR TCA 90 bp | AGGACTTTAGGTCCTGAGTCTCTCATGACATGGTCCCAACAGTTCTATGAGTTCTTAAGTCGGCACCTTTaGAGAGGCAGGAAGAATAAA | + |
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Preference number: 2 (lower is better) Translates to: RTLGPESLMTWSQQFYEFLSRHL*RGRKNK Trigger: TTTATTCTTCCTGCCTCTTCAAAGGTGCCGACTTAA...GAACTCATAGAACTGTTGGGACCATGTCATGAGAGACTCAGGACCTAAAGTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGGCAAAGGAGGACTTCTGCACTGCTTACAGGGAAACATACGCTTCCTCTCTACAGGCAATCACAAATaGATACACCATGCACAATTA | + |
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Preference number: 2 (lower is better) Translates to: EGKGGLLHCLQGNIRFLSTGNHK*IHHAQL Trigger: TAATTGTGCATGGTGTATGCATTTGTGATTGCCTGT...AGAGAGGAAGCGTATGTTTCCCTGTAAGCAGTGCAGAAGTCCTCCTTTGCCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| 3UTR-3UTR GCA 90 bp | AATGGGCCCAGTAGTATGCAGGTCTTGTGCTTCCAGAAGTTTCTTTATATATTAGAGCTGCCCTGTGAGTaGTGGGAATTGAACCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: NGPSSMQVLCFQKFLYILELPCE*WELNLD Trigger: ATCCAGGTTCAATTCCCAGCACTCACAGGGCAGCTC...TAATATATAAAGAAACTTCTGGAAGCACAAGACCTGCATACTACTGGGCCCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| 3UTR-3UTR GCA 90 bp | AATGGGCCCAGTAGTATGCAGGTCTTGTGCTTCCAGAAGTTTCTTTATATATTAGCAAAGGAGGACTTCTaGACTGCTTACAGGGAAACA | + |
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Preference number: 2 (lower is better) Translates to: NGPSSMQVLCFQKFLYILAKEDF*TAYRET Trigger: TGTTTCCCTGTAAGCAGTGCAGAAGTCCTCCTTTGC...TAATATATAAAGAAACTTCTGGAAGCACAAGACCTGCATACTACTGGGCCCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| 3UTR-3UTR CCA 90 bp | CATCAAAGTAAGTTTAGAGGTGCTGAAGAAACACCTCAGTGGGTAAGAGTACCTTGTTTTAAACAAAGATaGCCTCAAGTCAGACAACAC | + |
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Preference number: 2 (lower is better) Translates to: HQSKFRGAEETPQWVRVPCFKQR*PQVRQH Trigger: GTGTTGTCTGACTTGAGGCCATCTTTGTTTAAAACA...AGGTACTCTTACCCACTGAGGTGTTTCTTCAGCACCTCTAAACTTACTTTGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| 3UTR TCA 72 bp | GGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTaGGTTCCAGGACTGCCAGGGCTACAGAGAAAGCCT | + |
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Preference number: 3 (lower is better) Translates to: GFLSSRPAWSTE*VPGLPGLQRKP Trigger: AGGCTTTCTCTGTAGCCCTGGCAGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| 3UTR GCA 72 bp | GTCAGGGTTGCTAGATGCTTTCCTGTCCACCTTCTCTaGTTGAGCATAGGCACTGAGGGCTTGCTGGGAGAT | + |
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Preference number: 3 (lower is better) Translates to: VRVARCFPVHLL*LSIGTEGLLGD Trigger: ATCTCCCAGCAAGCCCTCAGTGCCTATGCTCAAGCAGAGAAGGTGGACAGGAAAGCATCTAGCAACCCTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228440.2 |
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| 3UTR CCA 72 bp | TCACCACCAGCAGAAGAGGCGTTTCCACACGCACGCTaGAGAAGGAATAGTCCTTTCCCTTGTGCCGGATTT | + |
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Preference number: 3 (lower is better) Translates to: SPPAEEAFPHAR*RRNSPFPCAGF Trigger: AAATCCGGCACAAGGGAAAGGACTATTCCTTCTCCAGCGTGCGTGTGGAAACGCCTCTTCTGCTGGTGGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227751.2 |
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| 3UTR CCA 72 bp | GGAGTTACAGATAGCTGTGAGCTGCCCTGTGAGTGCTaGGAATTGAACCTGGATCCTTTGGAAGAGCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: GVTDSCELPCEC*ELNLDPLEEQP Trigger: TGGCTGCTCTTCCAAAGGATCCAGGTTCAATTCCCAGCACTCACAGGGCAGCTCACAGCTATCTGTAACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| 3UTR CCA 72 bp | TACAAGGTCATTCACACTGCGGCCTTGAAGCTACTGTaGCAGAGGCTTGACTGCTGGAGTTCTGTGGCTTTC | + |
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Preference number: 3 (lower is better) Translates to: YKVIHTAALKLL*QRLDCWSSVAF Trigger: GAAAGCCACAGAACTCCAGCAGTCAAGCCTCTGCCACAGTAGCTTCAAGGCCGCAGTGTGAATGACCTTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227751.2 |
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| 3UTR TCA 72 bp | TTCATTGCCTCTACAAGGTCATTCACACTGCGGCCTTaGAGCTACTGTGGCAGAGGCTTGACTGCTGGAGTT | + |
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Preference number: 3 (lower is better) Translates to: FIASTRSFTLRP*SYCGRGLTAGV Trigger: AACTCCAGCAGTCAAGCCTCTGCCACAGTAGCTTCAAGGCCGCAGTGTGAATGACCTTGTAGAGGCAATGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227751.2 |
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| 3UTR GCA 72 bp | ACTGGAGTTACAGATAGCTGTGAGCTGCCCTGTGAGTaGTGGGAATTGAACCTGGATCCTTTGGAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: TGVTDSCELPCE*WELNLDPLEEQ Trigger: CTGCTCTTCCAAAGGATCCAGGTTCAATTCCCAGCACTCACAGGGCAGCTCACAGCTATCTGTAACTCCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| 3UTR GCA 72 bp | CCAACTCGCAGGGTGAGCTTAGCTATGAGACTTCATTaGCTCTACAAGGTCATTCACACTGCGGCCTTGAAG | + |
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Preference number: 3 (lower is better) Translates to: PTRRVSLAMRLH*LYKVIHTAALK Trigger: CTTCAAGGCCGCAGTGTGAATGACCTTGTAGAGGCAATGAAGTCTCATAGCTAAGCTCACCCTGCGAGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227751.2 |
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| 3UTR GCA 72 bp | TGGTCATCACAGCAGCAGAAGGCAAAGGAGGACTTCTaGACTGCTTACAGGGAAACATACGCTTCCTCTCTT | + |
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Preference number: 3 (lower is better) Translates to: WSSQQQKAKEDF*TAYRETYASSL Trigger: AAGAGAGGAAGCGTATGTTTCCCTGTAAGCAGTGCAGAAGTCCTCCTTTGCCTTCTGCTGCTGTGATGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| 3UTR TCA 72 bp | TTAATGCTTAGAAGGGCATGGGTATGGTTATGTACCTaGCCCCGTACCAGTGGTCACAACACTGGACAAAAT | + |
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Preference number: 3 (lower is better) Translates to: LMLRRAWVWLCT*PRTSGHNTGQN Trigger: ATTTTGTCCAGTGTTGTGACCACTGGTACGGGGTCAGGTACATAACCATACCCATGCCCTTCTAAGCATTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| 3UTR-3UTR CAA 90 bp | ATAAATGCTTTCCTCCCAGTGCTTCTGGTCATGATGGTCATCACAGCAGCAGAAGAGTACCTAGGAATGTaGTTAATGTCTTCTGGCATC | + |
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Preference number: 3 (lower is better) Translates to: INAFLPVLLVMMVITAAEEYLGM*LMSSGI Trigger: GATGCCAGAAGACATTAACAACATTCCTAGGTACTC...TTCTGCTGCTGTGATGACCATCATGACCAGAAGCACTGGGAGGAAAGCATTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| 3UTR GCA 72 bp | CTAGGAATGTTGTTAATGTCTTCTGGCATCCACATGTaGACAGGCAATCACAAATGCATACACCATGCACAA | + |
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Preference number: 3 (lower is better) Translates to: LGMLLMSSGIHM*TGNHKCIHHAQ Trigger: TTGTGCATGGTGTATGCATTTGTGATTGCCTGTGCACATGTGGATGCCAGAAGACATTAACAACATTCCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| 3UTR CCA 72 bp | TGGGTAAGAGTACCTAGGAATGTTGTTAATGTCTTCTaGCATCCACATGTGCACAGGCAATCACAAATGCAT | + |
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Preference number: 3 (lower is better) Translates to: WVRVPRNVVNVF*HPHVHRQSQMH Trigger: ATGCATTTGTGATTGCCTGTGCACATGTGGATGCCAGAAGACATTAACAACATTCCTAGGTACTCTTACCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| 3UTR TCA 72 bp | AAATTGGACTACAGGTGTATCTGTGGGGCATTTTCTTaGTTAGTGACTGATATGAGAGGATTCAACCTCCTG | + |
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Preference number: 3 (lower is better) Translates to: KLDYRCICGAFS*LVTDMRGFNLL Trigger: CAGGAGGTTGAATCCTCTCATATCAGTCACTAATCAAGAAAATGCCCCACAGATACACCTGTAGTCCAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| 3UTR TCA 72 bp | AGTTGTCTGAGAATAGGGACAATTCAATTGATAAGATaGCTCCACCAAATTGGACTACAGGTGTATCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: SCLRIGTIQLIR*LHQIGLQVYLW Trigger: CCACAGATACACCTGTAGTCCAATTTGGTGGAGTCATCTTATCAATTGAATTGTCCCTATTCTCAGACAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| 3UTR CCA 72 bp | CAAAGTAAGTTTAGAGGTGCTGAAGAAACACCTCAGTaGGTAAGAGTACCTAGGAATGTTGTTAATGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: QSKFRGAEETPQ*VRVPRNVVNVF Trigger: GAAGACATTAACAACATTCCTAGGTACTCTTACCCACTGAGGTGTTTCTTCAGCACCTCTAAACTTACTTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| CDS-3UTR TCA 90 bp | GCGTTTCCACACGCACGCTGGAGAAGGAATAGTCCTTTCCCTTGTGCCGGATTTCCACAGGGGCCCAGATaGGCTGGGCGCAAGCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: AFPHARWRRNSPFPCAGFPQGPR*AGRKLP Trigger: GGGAAGCTTGCGCCCAGCTCATCTGGGCCCCTGTGG...AAATCCGGCACAAGGGAAAGGACTATTCCTTCTCCAGCGTGCGTGTGGAAACGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227751.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGGAAGAGAAGTCCCCATTTCCAACTCGCAGGGTGAGCTTAGCTATGAGTCGTTGCTGGGGCTCTaGCCACACAGGGTCCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GRGREVPISNSQGELSYESLLGL*PHRVQR Trigger: GCGCTGGACCCTGTGTGGCCAGAGCCCCAGCAACGA...CTCATAGCTAAGCTCACCCTGCGAGTTGGAAATGGGGACTTCTCTTCCCCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
||
| CDS-3UTR TCA 90 bp | CACCCTCTGCTTCAATTCCTGTCTCCAGGTTCCTGCCTTGAGTTCCTGCCCCAGGCCGGACGCTGTCCATaGCGTGGCGAGAATGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HPLLQFLSPGSCLEFLPQAGRCP*RGENVH Trigger: ATGAACATTCTCGCCACGTCATGGACAGCGTCCGGC...CTGGGGCAGGAACTCAAGGCAGGAACCTGGAGACAGGAATTGAAGCAGAGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
||
| CDS-3UTR TCA 90 bp | CATACATATTGGACTCAGGAAGGAGGCGAGAACAGGGATCTCGTGGACTGTCAACCACAGGGGCCCAGATaGGCTGGGCGCAAGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HTYWTQEGGENRDLVDCQPQGPR*AGRKLP Trigger: GGGAAGCTTGCGCCCAGCTCATCTGGGCCCCTGTGG...TTGACAGTCCACGAGATCCCTGTTCTCGCCTCCTTCCTGAGTCCAATATGTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGGAAGAGAAGTCCCCATTTCCAACTCGCAGGGTGAGCTTAGCTATGAGCACAGGGTCCAGCGCTaGAGCCTGAGAGAAACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GRGREVPISNSQGELSYEHRVQR*SLRETL Trigger: GAGGGTTTCTCTCAGGCTGCAGCGCTGGACCCTGTG...CTCATAGCTAAGCTCACCCTGCGAGTTGGAAATGGGGACTTCTCTTCCCCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAAGAGGCGTTTCCACACGCACGCTGGAGAAGGAATAGTCCTTTCCCTTGTGGGGCCCAGATGAGCTaGGCGCAAGCTTCCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AEEAFPHARWRRNSPFPCGAQMS*AQASQH Trigger: ATGCTGGGAAGCTTGCGCCCAGCTCATCTGGGCCCC...ACAAGGGAAAGGACTATTCCTTCTCCAGCGTGCGTGTGGAAACGCCTCTTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227751.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGGAAGAGAAGTCCCCATTTCCAACTCGCAGGGTGAGCTTAGCTATGAGCCTGAGAAGCAGGTGTaGGCAGACGCGACATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GRGREVPISNSQGELSYEPEKQV*ADATSP Trigger: AGGAGATGTCGCGTCTGCCCACACCTGCTTCTCAGG...CTCATAGCTAAGCTCACCCTGCGAGTTGGAAATGGGGACTTCTCTTCCCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
||
| CDS-3UTR GCA 90 bp | GCGTTTCCACACGCACGCTGGAGAAGGAATAGTCCTTTCCCTTGTGCCGGATTTTTCCCAGGACCACGGTaGCACTGTTCACACCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AFPHARWRRNSPFPCAGFFPGPR*HCSHQA Trigger: AGCCTGGTGTGAACAGTGGCACCGTGGTCCTGGGAA...AAATCCGGCACAAGGGAAAGGACTATTCCTTCTCCAGCGTGCGTGTGGAAACGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227751.2 |
||
| CDS-3UTR GCA 90 bp | TCAAGAGATCTAAGAATTCCAAAAACAGGCCGGGCAGTGGTGGTGCACGCCTTTACGGCCAACTTAGCCTaGCGGACGCTGTCCATGACG | + |
|
Preference number: 4 (lower is better) Translates to: SRDLRIPKTGRAVVVHAFTANLA*RTLSMT Trigger: CGTCATGGACAGCGTCCGGCAGGCTAAGTTGGCCGT...AAAGGCGTGCACCACCACTGCCCGGCCTGTTTTTGGAATTCTTAGATCTCTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGGAAGAGAAGTCCCCATTTCCAACTCGCAGGGTGAGCTTAGCTATGAGAGGAATTCCAGGAGTTaGTGTTCTCGTTGCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRGREVPISNSQGELSYERNSRS*CSRCWG Trigger: GCCCCAGCAACGAGAACAGCAACTCCTGGAATTCCT...CTCATAGCTAAGCTCACCCTGCGAGTTGGAAATGGGGACTTCTCTTCCCCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
||
| CDS-3UTR CCA 90 bp | CCATTTCCAACTCGCAGGGTGAGCTTAGCTATGAGACTTCATTGCCTCTACAAGGGGGCCCAGATGAGCTaGGCGCAAGCTTCCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PFPTRRVSLAMRLHCLYKGAQMS*AQASQH Trigger: ATGCTGGGAAGCTTGCGCCCAGCTCATCTGGGCCCC...CTTGTAGAGGCAATGAAGTCTCATAGCTAAGCTCACCCTGCGAGTTGGAAATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006451.8 ENSMUST00000227751.2 |
||
| CDS-3UTR TCA 90 bp | AAAGGAAAGAGACTCAACTATGTTCCAGGGCAGGGGAAGAGAAGTCCCCATTTCCTACAGAGTCCCCGATaGGCACTCCCCAGCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KGKRLNYVPGQGKRSPHFLQSPR*ALPSSA Trigger: TGCAGAGCTGGGGAGTGCTCATCGGGGACTCTGTAG...GAAATGGGGACTTCTCTTCCCCTGCCCTGGAACATAGTTGAGTCTCTTTCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAGAAAGATATGCATTCCCCAGGATATCTGCAAGAGCAACAGCAGTGGGCCACGGCCAACTTAGCCTaGCGGACGCTGTCCATGACG | + |
|
Preference number: 4 (lower is better) Translates to: KEKDMHSPGYLQEQQQWATANLA*RTLSMT Trigger: CGTCATGGACAGCGTCCGGCAGGCTAAGTTGGCCGT...GGCCCACTGCTGTTGCTCTTGCAGATATCCTGGGGAATGCATATCTTTCTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228440.2 |
||
| CDS-3UTR GCA 90 bp | GGCACCTTTGAAGAGGCAGGAAGAATAAACAAGGGTCCCAATGGCTCTGAAGAGTTCCCAGGACCACGGTaGCACTGTTCACACCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GTFEEAGRINKGPNGSEEFPGPR*HCSHQA Trigger: AGCCTGGTGTGAACAGTGGCACCGTGGTCCTGGGAA...CTCTTCAGAGCCATTGGGACCCTTGTTTATTCTTCCTGCCTCTTCAAAGGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
||
| 3UTR CAA 72 bp | CTGCCCTGTGAGTGCTGGGAATTGAACCTGGATCCTTaGGAAGAGCAGCCAGTGCTCTTAACCACTAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPCECWELNLDP*EEQPVLLTTKP Trigger: TGGCTTAGTGGTTAAGAGCACTGGCTGCTCTTCCAAAGGATCCAGGTTCAATTCCCAGCACTCACAGGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
||
| 3UTR CAA 72 bp | CTTCATTGCCTCTACAAGGTCATTCACACTGCGGCCTaGAAGCTACTGTGGCAGAGGCTTGACTGCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LHCLYKVIHTAA*KLLWQRLDCWS Trigger: ACTCCAGCAGTCAAGCCTCTGCCACAGTAGCTTCAAGGCCGCAGTGTGAATGACCTTGTAGAGGCAATGAAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227751.2 |
||
| CDS-3UTR TCA 90 bp | ATGTACATACATATTGGACTCAGGAAGGAGGCGAGAACAGGGATCTCGTGGACTTGTTCTTGCAGTGGGTaGGGGCTCCTGAGAAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MYIHIGLRKEARTGISWTCSCSG*GLLRSR Trigger: CCTGCTTCTCAGGAGCCCTCACCCACTGCAAGAACA...AGTCCACGAGATCCCTGTTCTCGCCTCCTTCCTGAGTCCAATATGTATGTACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
||
| CDS-3UTR TCA 90 bp | GAAGAGAAGTCCCCATTTCCAACTCGCAGGGTGAGCTTAGCTATGAGACTTCATGCCGGACGCTGTCCATaGCGTGGCGAGAATGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: EEKSPFPTRRVSLAMRLHAGRCP*RGENVH Trigger: ATGAACATTCTCGCCACGTCATGGACAGCGTCCGGC...ATGAAGTCTCATAGCTAAGCTCACCCTGCGAGTTGGAAATGGGGACTTCTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
||
| CDS-3UTR GCA 90 bp | ACTGATATGTACATACATATTGGACTCAGGAAGGAGGCGAGAACAGGGATCTCGACGGCCAACTTAGCCTaGCGGACGCTGTCCATGACG | + |
|
Preference number: 4 (lower is better) Translates to: TDMYIHIGLRKEARTGISTANLA*RTLSMT Trigger: CGTCATGGACAGCGTCCGGCAGGCTAAGTTGGCCGT...CGAGATCCCTGTTCTCGCCTCCTTCCTGAGTCCAATATGTATGTACATATCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
||
| CDS-3UTR GCA 90 bp | GGCACCTTTGAAGAGGCAGGAAGAATAAACAAGGGTCCCAATGGCTCTGAAGAGAGTTGCTGTTCTCGTTaGTGGGGCTCTGGCCACACA | + |
|
Preference number: 4 (lower is better) Translates to: GTFEEAGRINKGPNGSEESCCSR*WGSGHT Trigger: TGTGTGGCCAGAGCCCCAGCAACGAGAACAGCAACT...CTCTTCAGAGCCATTGGGACCCTTGTTTATTCTTCCTGCCTCTTCAAAGGTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
||
| CDS-3UTR TCA 90 bp | GAAGAGAAGTCCCCATTTCCAACTCGCAGGGTGAGCTTAGCTATGAGACTTCATGTAACGTCGCCCTGTTaGGATGAAGGTCAGGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: EEKSPFPTRRVSLAMRLHVTSPC*DEGQGC Trigger: GCAACCCTGACCTTCATCTCAACAGGGCGACGTTAC...ATGAAGTCTCATAGCTAAGCTCACCCTGCGAGTTGGAAATGGGGACTTCTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
||
| CDS-3UTR TCA 90 bp | ATATGTACATACATATTGGACTCAGGAAGGAGGCGAGAACAGGGATCTCGTGGATTCACACTGCGGCCTTaGAGCTACTGTGGCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ICTYILDSGRRREQGSRGFTLRP*SYCGRG Trigger: GCCTCTGCCACAGTAGCTTCAAGGCCGCAGTGTGAA...TCCACGAGATCCCTGTTCTCGCCTCCTTCCTGAGTCCAATATGTATGTACATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
||
| CDS-3UTR GCA 90 bp | GTCATCACAGCAGCAGAAGGCAAAGGAGGACTTCTGCACTGCTTACAGGGAAACTCTTCCTGTACATCCTaGTGCTTCCGTCCTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: VITAAEGKGGLLHCLQGNSSCTS*CFRPAS Trigger: AGATGCAGGACGGAAGCAGCAGGATGTACAGGAAGA...GTTTCCCTGTAAGCAGTGCAGAAGTCCTCCTTTGCCTTCTGCTGCTGTGATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTGTGTCAGGGTCTCACCAATGTAGCCCTGGTTGGCCTCAAACTAACAAAGTCAAGGACATCCATCTaGACGGCCAACTTAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLCQGLTNVALVGLKLTKSRTSI*TANLAC Trigger: GCAGGCTAAGTTGGCCGTGCAGATGGATGTCCTTGA...CTTTGTTAGTTTGAGGCCAACCAGGGCTACATTGGTGAGACCCTGACACAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
||
| CDS-3UTR GCA 90 bp | TCCCCATTTCCAACTCGCAGGGTGAGCTTAGCTATGAGACTTCATTGCCTCTACCCTGTCCACCTTCTCTaGTTGAGCATAGGCACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPFPTRRVSLAMRLHCLYPVHLL*LSIGTE Trigger: CTCAGTGCCTATGCTCAAGCAGAGAAGGTGGACAGG...GTAGAGGCAATGAAGTCTCATAGCTAAGCTCACCCTGCGAGTTGGAAATGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
||
| CDS-3UTR GCA 90 bp | CATACATATTGGACTCAGGAAGGAGGCGAGAACAGGGATCTCGTGGACTGTCAAGCTTTGTCTTCCCCTTaGTCTCCAGGAGGCTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: HTYWTQEGGENRDLVDCQALSSP*SPGGWL Trigger: TAACCAGCCTCCTGGAGAGCAAGGGGAAGACAAAGC...TTGACAGTCCACGAGATCCCTGTTCTCGCCTCCTTCCTGAGTCCAATATGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
||
| CDS-3UTR CCA 90 bp | GTCATCACAGCAGCAGAAGGCAAAGGAGGACTTCTGCACTGCTTACAGGGAAACACGCTGTCCATGACGTaGCGAGAATGTTCATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VITAAEGKGGLLHCLQGNTLSMT*RECSSP Trigger: TGGAGATGAACATTCTCGCCACGTCATGGACAGCGT...GTTTCCCTGTAAGCAGTGCAGAAGTCCTCCTTTGCCTTCTGCTGCTGTGATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
||
| CDS-3UTR CCA 90 bp | CCAACTCGCAGGGTGAGCTTAGCTATGAGACTTCATTGCCTCTACAAGGTCATTCTGCAGGGTGCTCAGTaGCTTAAGCTCCAGGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PTRRVSLAMRLHCLYKVILQGAQ*LKLQGH Trigger: ATGACCCTGGAGCTTAAGCCACTGAGCACCCTGCAG...AATGACCTTGTAGAGGCAATGAAGTCTCATAGCTAAGCTCACCCTGCGAGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227751.2 |
||
| CDS-3UTR CCA 90 bp | GAAGAGAAGTCCCCATTTCCAACTCGCAGGGTGAGCTTAGCTATGAGACTTCATGCCTTGAAGCTACTGTaGCAGAGGCTTGACTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EEKSPFPTRRVSLAMRLHALKLL*QRLDCW Trigger: CCAGCAGTCAAGCCTCTGCCACAGTAGCTTCAAGGC...ATGAAGTCTCATAGCTAAGCTCACCCTGCGAGTTGGAAATGGGGACTTCTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
||
| 3UTR CAA 72 bp | GCTGGAGAAGGAATAGTCCTTTCCCTTGTGCCGGATTaGATGATGCCGAAGGTTGGGCTCAGGAATAGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: AGEGIVLSLVPD*MMPKVGLRNSY Trigger: GTAGCTATTCCTGAGCCCAACCTTCGGCATCATCAAATCCGGCACAAGGGAAAGGACTATTCCTTCTCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227751.2 |
||
| CDS-3UTR TCA 90 bp | AGGACTTTAGGTCCTGAGTCTCTCATGACATGGTCCCAACAGTTCTATGAGTTCCTTGAGCATAGGCACTaGGGGCTTGCTGGGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: RTLGPESLMTWSQQFYEFLEHRH*GLAGRS Trigger: AGATCTCCCAGCAAGCCCTCAGTGCCTATGCTCAAG...GAACTCATAGAACTGTTGGGACCATGTCATGAGAGACTCAGGACCTAAAGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
||
| CDS-3UTR GCA 90 bp | AAAGGAAAGAGACTCAACTATGTTCCAGGGCAGGGGAAGAGAAGTCCCCATTTCTCAAGGACATCCATCTaGACGGCCAACTTAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KGKRLNYVPGQGKRSPHFSRTSI*TANLAC Trigger: GCAGGCTAAGTTGGCCGTGCAGATGGATGTCCTTGA...GAAATGGGGACTTCTCTTCCCCTGCCCTGGAACATAGTTGAGTCTCTTTCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAGAAAGATATGCATTCCCCAGGATATCTGCAAGAGCAACAGCAGTGGGCCTCAAGGACATCCATCTaGACGGCCAACTTAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KEKDMHSPGYLQEQQQWASRTSI*TANLAC Trigger: GCAGGCTAAGTTGGCCGTGCAGATGGATGTCCTTGA...GGCCCACTGCTGTTGCTCTTGCAGATATCCTGGGGAATGCATATCTTTCTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228440.2 |
||
| CDS-3UTR GCA 90 bp | CCATTTCCAACTCGCAGGGTGAGCTTAGCTATGAGACTTCATTGCCTCTACAAGCTTCCCAGCATGCTCTaGAGCTTCTTGGGCTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PFPTRRVSLAMRLHCLYKLPSML*SFLGFV Trigger: GACAAAGCCCAAGAAGCTGCAGAGCATGCTGGGAAG...CTTGTAGAGGCAATGAAGTCTCATAGCTAAGCTCACCCTGCGAGTTGGAAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
||
| CDS-3UTR CCA 90 bp | TCCCCATTTCCAACTCGCAGGGTGAGCTTAGCTATGAGACTTCATTGCCTCTACACTTTGTTCTTGCAGTaGGTGAGGGCTCCTGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPFPTRRVSLAMRLHCLYTLFLQ*VRAPEK Trigger: CTTCTCAGGAGCCCTCACCCACTGCAAGAACAAAGT...GTAGAGGCAATGAAGTCTCATAGCTAAGCTCACCCTGCGAGTTGGAAATGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
||
| CDS-3UTR CCA 90 bp | ATGTACATACATATTGGACTCAGGAAGGAGGCGAGAACAGGGATCTCGTGGACTTGCTCTGCAGCTTCTTaGGCTTTGTCTTCCCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: MYIHIGLRKEARTGISWTCSAAS*ALSSPC Trigger: GCAAGGGGAAGACAAAGCCCAAGAAGCTGCAGAGCA...AGTCCACGAGATCCCTGTTCTCGCCTCCTTCCTGAGTCCAATATGTATGTACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
||
| CDS-3UTR CCA 90 bp | AGGACTTTAGGTCCTGAGTCTCTCATGACATGGTCCCAACAGTTCTATGAGTTCCTGCAGGGTGCTCAGTaGCTTAAGCTCCAGGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RTLGPESLMTWSQQFYEFLQGAQ*LKLQGH Trigger: ATGACCCTGGAGCTTAAGCCACTGAGCACCCTGCAG...GAACTCATAGAACTGTTGGGACCATGTCATGAGAGACTCAGGACCTAAAGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
||
| CDS-3UTR CCA 90 bp | CATACATATTGGACTCAGGAAGGAGGCGAGAACAGGGATCTCGTGGACTGTCAACAGAGGCTTGACTGCTaGAGTTCTGTGGCTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HTYWTQEGGENRDLVDCQQRLDC*SSVAFH Trigger: ATGGAAAGCCACAGAACTCCAGCAGTCAAGCCTCTG...TTGACAGTCCACGAGATCCCTGTTCTCGCCTCCTTCCTGAGTCCAATATGTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
||
| 3UTR CAA 72 bp | TCCAACTCGCAGGGTGAGCTTAGCTATGAGACTTCATaGCCTCTACAAGGTCATTCACACTGCGGCCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SNSQGELSYETS*PLQGHSHCGLE Trigger: TTCAAGGCCGCAGTGTGAATGACCTTGTAGAGGCAATGAAGTCTCATAGCTAAGCTCACCCTGCGAGTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227751.2 |
||
| CDS-3UTR TCA 90 bp | AAACCAAATGGGCCCAGTAGTATGCAGGTCTTGTGCTTCCAGAAGTTTCTTTATTGTTCTTGCAGTGGGTaGGGGCTCCTGAGAAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KPNGPSSMQVLCFQKFLYCSCSG*GLLRSR Trigger: CCTGCTTCTCAGGAGCCCTCACCCACTGCAAGAACA...ATAAAGAAACTTCTGGAAGCACAAGACCTGCATACTACTGGGCCCATTTGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
||
| CDS-3UTR TCA 90 bp | AGGACTTTAGGTCCTGAGTCTCTCATGACATGGTCCCAACAGTTCTATGAGTTCGTCGCCCTGTTGAGATaGAGGTCAGGGTTGCTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RTLGPESLMTWSQQFYEFVALLR*RSGLLD Trigger: ATCTAGCAACCCTGACCTTCATCTCAACAGGGCGAC...GAACTCATAGAACTGTTGGGACCATGTCATGAGAGACTCAGGACCTAAAGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
||
| CDS-3UTR GCA 90 bp | ACTGATATGTACATACATATTGGACTCAGGAAGGAGGCGAGAACAGGGATCTCGTGGCAGAGGCTTGACTaGTGGAGTTCTGTGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TDMYIHIGLRKEARTGISWQRLD*WSSVAF Trigger: GAAAGCCACAGAACTCCAGCAGTCAAGCCTCTGCCA...CGAGATCCCTGTTCTCGCCTCCTTCCTGAGTCCAATATGTATGTACATATCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
||
| CDS-3UTR CCA 90 bp | CCATTTCCAACTCGCAGGGTGAGCTTAGCTATGAGACTTCATTGCCTCTACAAGACGCTGTCCATGACGTaGCGAGAATGTTCATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PFPTRRVSLAMRLHCLYKTLSMT*RECSSP Trigger: TGGAGATGAACATTCTCGCCACGTCATGGACAGCGT...CTTGTAGAGGCAATGAAGTCTCATAGCTAAGCTCACCCTGCGAGTTGGAAATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAGAAAGATATGCATTCCCCAGGATATCTGCAAGAGCAACAGCAGTGGGCCACGCTGTCCATGACGTaGCGAGAATGTTCATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KEKDMHSPGYLQEQQQWATLSMT*RECSSP Trigger: TGGAGATGAACATTCTCGCCACGTCATGGACAGCGT...GGCCCACTGCTGTTGCTCTTGCAGATATCCTGGGGAATGCATATCTTTCTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228440.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGAAGAATAAACAAGGGTCCCAATGGCTCTGAAGAGGGCTGGAATACAGCATTTCCACACGCACGCTaGAGAAGGAATAGTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AGRINKGPNGSEEGWNTAFPHAR*RRNSPF Trigger: GAAAGGACTATTCCTTCTCCAGCGTGCGTGTGGAAA...TGCTGTATTCCAGCCCTCTTCAGAGCCATTGGGACCCTTGTTTATTCTTCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
||
| CDS-3UTR TCA 90 bp | GAAATAAAGAGAAAGATATGCATTCCCCAGGATATCTGCAAGAGCAACAGCAGTTGTTCTTGCAGTGGGTaGGGGCTCCTGAGAAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EIKRKICIPQDICKSNSSCSCSG*GLLRSR Trigger: CCTGCTTCTCAGGAGCCCTCACCCACTGCAAGAACA...ACTGCTGTTGCTCTTGCAGATATCCTGGGGAATGCATATCTTTCTCTTTATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228440.2 |
||
| CDS-3UTR GCA 90 bp | ACTGATATGTACATACATATTGGACTCAGGAAGGAGGCGAGAACAGGGATCTCGTCTTCCTGTACATCCTaGTGCTTCCGTCCTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: TDMYIHIGLRKEARTGISSSCTS*CFRPAS Trigger: AGATGCAGGACGGAAGCAGCAGGATGTACAGGAAGA...CGAGATCCCTGTTCTCGCCTCCTTCCTGAGTCCAATATGTATGTACATATCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
||
| CDS-3UTR GCA 90 bp | AGGACTTTAGGTCCTGAGTCTCTCATGACATGGTCCCAACAGTTCTATGAGTTCAGGAGTCACATTCAGTaGCTTCCCCTTCAGCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: RTLGPESLMTWSQQFYEFRSHIQ*LPLQHQ Trigger: CTGATGCTGAAGGGGAAGGCACTGAATGTGACTCCT...GAACTCATAGAACTGTTGGGACCATGTCATGAGAGACTCAGGACCTAAAGTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
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| CDS-3UTR GCA 90 bp | AGGACTTTAGGTCCTGAGTCTCTCATGACATGGTCCCAACAGTTCTATGAGTTCAGCACTCCCCAGCTCTaGACCACATTATACACCATC | + |
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Preference number: 4 (lower is better) Translates to: RTLGPESLMTWSQQFYEFSTPQL*TTLYTI Trigger: GATGGTGTATAATGTGGTGCAGAGCTGGGGAGTGCT...GAACTCATAGAACTGTTGGGACCATGTCATGAGAGACTCAGGACCTAAAGTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
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| CDS-3UTR CCA 90 bp | GAAATAAAGAGAAAGATATGCATTCCCCAGGATATCTGCAAGAGCAACAGCAGTCCTGAGAAGCAGGTGTaGGCAGACGCGACATCTCCT | + |
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Preference number: 4 (lower is better) Translates to: EIKRKICIPQDICKSNSSPEKQV*ADATSP Trigger: AGGAGATGTCGCGTCTGCCCACACCTGCTTCTCAGG...ACTGCTGTTGCTCTTGCAGATATCCTGGGGAATGCATATCTTTCTCTTTATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228440.2 |
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| CDS-3UTR CCA 90 bp | ATATGTACATACATATTGGACTCAGGAAGGAGGCGAGAACAGGGATCTCGTGGAACTGCTGGAGTTCTGTaGCTTTCCATTCACCACCAG | + |
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Preference number: 4 (lower is better) Translates to: ICTYILDSGRRREQGSRGTAGVL*LSIHHQ Trigger: CTGGTGGTGAATGGAAAGCCACAGAACTCCAGCAGT...TCCACGAGATCCCTGTTCTCGCCTCCTTCCTGAGTCCAATATGTATGTACATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
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| CDS-3UTR GCA 90 bp | GGCACCTTTGAAGAGGCAGGAAGAATAAACAAGGGTCCCAATGGCTCTGAAGAGACCATGGACAAGTTCTaGAGAGAGACTTTGTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: GTFEEAGRINKGPNGSEETMDKF*RETLFL Trigger: CAAGAACAAAGTCTCTCTGCAGAACTTGTCCATGGT...CTCTTCAGAGCCATTGGGACCCTTGTTTATTCTTCCTGCCTCTTCAAAGGTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
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| CDS-3UTR GCA 90 bp | AAAGGAAAGAGACTCAACTATGTTCCAGGGCAGGGGAAGAGAAGTCCCCATTTCATTATACACCATCACTaGATAGCAGGGACCATCCGA | + |
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Preference number: 4 (lower is better) Translates to: KGKRLNYVPGQGKRSPHFIIHHH*IAGTIR Trigger: TCGGATGGTCCCTGCTATGCAGTGATGGTGTATAAT...GAAATGGGGACTTCTCTTCCCCTGCCCTGGAACATAGTTGAGTCTCTTTCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
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| CDS-3UTR CCA 90 bp | CATTTCCATACACGCACAAACTGTAGATTATATTTCTATCCTCCATCATCCCCTCCTGAGAAGCAGGTGTaGGCAGACGCGACATCTCCT | + |
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Preference number: 4 (lower is better) Translates to: HFHTRTNCRLYFYPPSSPPEKQV*ADATSP Trigger: AGGAGATGTCGCGTCTGCCCACACCTGCTTCTCAGG...AGGGGATGATGGAGGATAGAAATATAATCTACAGTTTGTGCGTGTATGGAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| CDS-3UTR CCA 90 bp | CTCCACCAAATTGGACTACAGGTGTATCTGTGGGGCATTTTCTTGATTAGTGACACTTTGTTCTTGCAGTaGGTGAGGGCTCCTGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: LHQIGLQVYLWGIFLISDTLFLQ*VRAPEK Trigger: CTTCTCAGGAGCCCTCACCCACTGCAAGAACAAAGT...GTCACTAATCAAGAAAATGCCCCACAGATACACCTGTAGTCCAATTTGGTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| CDS-3UTR GCA 90 bp | GAAATAAAGAGAAAGATATGCATTCCCCAGGATATCTGCAAGAGCAACAGCAGTTCTTCCTGTACATCCTaGTGCTTCCGTCCTGCATCT | + |
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Preference number: 4 (lower is better) Translates to: EIKRKICIPQDICKSNSSSSCTS*CFRPAS Trigger: AGATGCAGGACGGAAGCAGCAGGATGTACAGGAAGA...ACTGCTGTTGCTCTTGCAGATATCCTGGGGAATGCATATCTTTCTCTTTATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228440.2 |
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| CDS-3UTR GCA 90 bp | GACATTTCCATACACGCACAAACTGTAGATTATATTTCTATCCTCCATCATCCCAGGAGTCACATTCAGTaGCTTCCCCTTCAGCATCAG | + |
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Preference number: 4 (lower is better) Translates to: DISIHAQTVDYISILHHPRSHIQ*LPLQHQ Trigger: CTGATGCTGAAGGGGAAGGCACTGAATGTGACTCCT...GGGATGATGGAGGATAGAAATATAATCTACAGTTTGTGCGTGTATGGAAATGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| CDS-3UTR GCA 90 bp | CATCAAAGTAAGTTTAGAGGTGCTGAAGAAACACCTCAGTGGGTAAGAGTACCTACCATGGACAAGTTCTaGAGAGAGACTTTGTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: HQSKFRGAEETPQWVRVPTMDKF*RETLFL Trigger: CAAGAACAAAGTCTCTCTGCAGAACTTGTCCATGGT...AGGTACTCTTACCCACTGAGGTGTTTCTTCAGCACCTCTAAACTTACTTTGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| CDS-3UTR GCA 90 bp | AAAGGAAAGAGACTCAACTATGTTCCAGGGCAGGGGAAGAGAAGTCCCCATTTCATAAAGAGAAAGATATaGATTCCCCAGGATATACCA | + |
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Preference number: 4 (lower is better) Translates to: KGKRLNYVPGQGKRSPHFIKRKI*IPQDIP Trigger: TGGTATATCCTGGGGAATGCATATCTTTCTCTTTAT...GAAATGGGGACTTCTCTTCCCCTGCCCTGGAACATAGTTGAGTCTCTTTCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
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| CDS-3UTR GCA 90 bp | GAAATAAAGAGAAAGATATGCATTCCCCAGGATATCTGCAAGAGCAACAGCAGTACCATGGACAAGTTCTaGAGAGAGACTTTGTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: EIKRKICIPQDICKSNSSTMDKF*RETLFL Trigger: CAAGAACAAAGTCTCTCTGCAGAACTTGTCCATGGT...ACTGCTGTTGCTCTTGCAGATATCCTGGGGAATGCATATCTTTCTCTTTATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228440.2 |
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| CDS CCA 90 bp | CAGGACCACGGTGCCACTGTTCACACCAGGCTGCAGGGTGCTCAGTaGCTTAAGCTCCAGGGTCATCTTCTGCCCAGAGGCCGACTGATA | + |
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Preference number: 5 (lower is better) Translates to: QDHGATVHTRLQGAQ*LKLQGHLLPRGRLI Trigger: TATCAGTCGGCCTCTGGGCAGAAGATGACCCTGGAGCTTAAGCCACTGAGCACCCTGCAGCCTGGTGTGAACAGTGGCACCGTGGTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006451.8 ENSMUST00000227751.2 |
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| CDS-3UTR CAA 90 bp | GGCAGGGGAAGAGAAGTCCCCATTTCCAACTCGCAGGGTGAGCTTAGCTATGAGTCCAGCTTCACGGCCTaGGAGAGAAGCACCTCGGCC | + |
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Preference number: 5 (lower is better) Translates to: GRGREVPISNSQGELSYESSFTA*ERSTSA Trigger: GGCCGAGGTGCTTCTCTCCAAGGCCGTGAAGCTGGA...CTCATAGCTAAGCTCACCCTGCGAGTTGGAAATGGGGACTTCTCTTCCCCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
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| CDS GCA 90 bp | TCTCCAGAGTCGGTCTGCAGCTGGCGGAGCACCATGGACAAGTTCTaGAGAGAGACTTTGTTCTTGCAGTGGGTGAGGGCTCCTGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: SPESVCSWRSTMDKF*RETLFLQWVRAPEK Trigger: CTTCTCAGGAGCCCTCACCCACTGCAAGAACAAAGTCTCTCTGCAGAACTTGTCCATGGTGCTCCGCCAGCTGCAGACCGACTCTGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006451.8 ENSMUST00000226768.2 ENSMUST00000228440.2 |
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| CDS GCA 90 bp | CCCGATGAGCACTCCCCAGCTCTGCACCACATTATACACCATCACTaGATAGCAGGGACCATCCGAATCTACCAAGCCAAACGTGAAGGG | + |
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Preference number: 5 (lower is better) Translates to: PDEHSPALHHIIHHH*IAGTIRIYQAKREG Trigger: CCCTTCACGTTTGGCTTGGTAGATTCGGATGGTCCCTGCTATGCAGTGATGGTGTATAATGTGGTGCAGAGCTGGGGAGTGCTCATCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
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| CDS-3UTR CAA 90 bp | AAAGAGAAAGATATGCATTCCCCAGGATATCTGCAAGAGCAACAGCAGTGGGCCTCCAGCTTCACGGCCTaGGAGAGAAGCACCTCGGCC | + |
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Preference number: 5 (lower is better) Translates to: KEKDMHSPGYLQEQQQWASSFTA*ERSTSA Trigger: GGCCGAGGTGCTTCTCTCCAAGGCCGTGAAGCTGGA...GGCCCACTGCTGTTGCTCTTGCAGATATCCTGGGGAATGCATATCTTTCTCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228440.2 |
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| CDS-3UTR CAA 90 bp | GGCAGGGGAAGAGAAGTCCCCATTTCCAACTCGCAGGGTGAGCTTAGCTATGAGATGCTCTGCAGCTTCTaGGGCTTTGTCTTCCCCTTG | + |
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Preference number: 5 (lower is better) Translates to: GRGREVPISNSQGELSYEMLCSF*GFVFPL Trigger: CAAGGGGAAGACAAAGCCCAAGAAGCTGCAGAGCAT...CTCATAGCTAAGCTCACCCTGCGAGTTGGAAATGGGGACTTCTCTTCCCCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
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| CDS-3UTR CAA 90 bp | CATACATATTGGACTCAGGAAGGAGGCGAGAACAGGGATCTCGTGGACTGTCAAGTCCACCTTCTCTGCTaGAGCATAGGCACTGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: HTYWTQEGGENRDLVDCQVHLLC*SIGTEG Trigger: GCCCTCAGTGCCTATGCTCAAGCAGAGAAGGTGGAC...TTGACAGTCCACGAGATCCCTGTTCTCGCCTCCTTCCTGAGTCCAATATGTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
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| CDS-3UTR CAA 90 bp | AAAGGAAAGAGACTCAACTATGTTCCAGGGCAGGGGAAGAGAAGTCCCCATTTCGAGTTGCTGTTCTCGTaGCTGGGGCTCTGGCCACAC | + |
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Preference number: 5 (lower is better) Translates to: KGKRLNYVPGQGKRSPHFELLFS*LGLWPH Trigger: GTGTGGCCAGAGCCCCAGCAACGAGAACAGCAACTC...GAAATGGGGACTTCTCTTCCCCTGCCCTGGAACATAGTTGAGTCTCTTTCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
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| CDS-3UTR CAA 90 bp | CATACATATTGGACTCAGGAAGGAGGCGAGAACAGGGATCTCGTGGACTGTCAAGAGGAATTCCAGGAGTaGCTGTTCTCGTTGCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: HTYWTQEGGENRDLVDCQEEFQE*LFSLLG Trigger: CCCCAGCAACGAGAACAGCAACTCCTGGAATTCCTC...TTGACAGTCCACGAGATCCCTGTTCTCGCCTCCTTCCTGAGTCCAATATGTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
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| CDS-3UTR CAA 90 bp | CATCAAAGTAAGTTTAGAGGTGCTGAAGAAACACCTCAGTGGGTAAGAGTACCTTCCAGCTTCACGGCCTaGGAGAGAAGCACCTCGGCC | + |
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Preference number: 5 (lower is better) Translates to: HQSKFRGAEETPQWVRVPSSFTA*ERSTSA Trigger: GGCCGAGGTGCTTCTCTCCAAGGCCGTGAAGCTGGA...AGGTACTCTTACCCACTGAGGTGTTTCTTCAGCACCTCTAAACTTACTTTGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| CDS-3UTR CAA 90 bp | TCCCCATTTCCAACTCGCAGGGTGAGCTTAGCTATGAGACTTCATTGCCTCTACAGAGAGACTTTGTTCTaGCAGTGGGTGAGGGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: SPFPTRRVSLAMRLHCLYRETLF*QWVRAP Trigger: AGGAGCCCTCACCCACTGCAAGAACAAAGTCTCTCT...GTAGAGGCAATGAAGTCTCATAGCTAAGCTCACCCTGCGAGTTGGAAATGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
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| CDS-3UTR CAA 90 bp | AGGACTTTAGGTCCTGAGTCTCTCATGACATGGTCCCAACAGTTCTATGAGTTCGGCTTTGTCTTCCCCTaGCTCTCCAGGAGGCTGGTT | + |
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Preference number: 5 (lower is better) Translates to: RTLGPESLMTWSQQFYEFGFVFP*LSRRLV Trigger: AACCAGCCTCCTGGAGAGCAAGGGGAAGACAAAGCC...GAACTCATAGAACTGTTGGGACCATGTCATGAGAGACTCAGGACCTAAAGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
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| CDS-3UTR CAA 90 bp | GAAGAGAAGTCCCCATTTCCAACTCGCAGGGTGAGCTTAGCTATGAGACTTCATGCAGCTTCTTGGGCTTaGTCTTCCCCTTGCTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: EEKSPFPTRRVSLAMRLHAASWA*SSPCSP Trigger: TGGAGAGCAAGGGGAAGACAAAGCCCAAGAAGCTGC...ATGAAGTCTCATAGCTAAGCTCACCCTGCGAGTTGGAAATGGGGACTTCTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
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| CDS-3UTR CAA 90 bp | CTGTCAAAACCTCTCAGGACTTTAGGTCCTGAGTCTCTCATGACATGGTCCCAAATTCACACTGCGGCCTaGAAGCTACTGTGGCAGAGG | + |
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Preference number: 5 (lower is better) Translates to: LSKPLRTLGPESLMTWSQIHTAA*KLLWQR Trigger: CCTCTGCCACAGTAGCTTCAAGGCCGCAGTGTGAAT...TTGGGACCATGTCATGAGAGACTCAGGACCTAAAGTCCTGAGAGGTTTTGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
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| CDS-3UTR CAA 90 bp | ATATGTACATACATATTGGACTCAGGAAGGAGGCGAGAACAGGGATCTCGTGGATCCCTTGTGCCGGATTaGATGATGCCGAAGGTTGGG | + |
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Preference number: 5 (lower is better) Translates to: ICTYILDSGRRREQGSRGSLVPD*MMPKVG Trigger: CCCAACCTTCGGCATCATCAAATCCGGCACAAGGGA...TCCACGAGATCCCTGTTCTCGCCTCCTTCCTGAGTCCAATATGTATGTACATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
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| CDS-3UTR CAA 90 bp | ACTGATATGTACATACATATTGGACTCAGGAAGGAGGCGAGAACAGGGATCTCGTACTGTGGCAGAGGCTaGACTGCTGGAGTTCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: TDMYIHIGLRKEARTGISYCGRG*TAGVLW Trigger: CCACAGAACTCCAGCAGTCAAGCCTCTGCCACAGTA...CGAGATCCCTGTTCTCGCCTCCTTCCTGAGTCCAATATGTATGTACATATCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
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| CDS-3UTR CAA 90 bp | AAAGGAAAGAGACTCAACTATGTTCCAGGGCAGGGGAAGAGAAGTCCCCATTTCTTCTGCAGAGAGACTTaGTTCTTGCAGTGGGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: KGKRLNYVPGQGKRSPHFFCRET*FLQWVR Trigger: CCTCACCCACTGCAAGAACAAAGTCTCTCTGCAGAA...GAAATGGGGACTTCTCTTCCCCTGCCCTGGAACATAGTTGAGTCTCTTTCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
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| CDS-3UTR CAA 90 bp | CATCAAAGTAAGTTTAGAGGTGCTGAAGAAACACCTCAGTGGGTAAGAGTACCTTTCTGCAGAGAGACTTaGTTCTTGCAGTGGGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: HQSKFRGAEETPQWVRVPFCRET*FLQWVR Trigger: CCTCACCCACTGCAAGAACAAAGTCTCTCTGCAGAA...AGGTACTCTTACCCACTGAGGTGTTTCTTCAGCACCTCTAAACTTACTTTGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| CDS-3UTR CAA 90 bp | AATGGGCCCAGTAGTATGCAGGTCTTGTGCTTCCAGAAGTTTCTTTATATATTAAGAGAGACTTTGTTCTaGCAGTGGGTGAGGGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: NGPSSMQVLCFQKFLYILRETLF*QWVRAP Trigger: AGGAGCCCTCACCCACTGCAAGAACAAAGTCTCTCT...TAATATATAAAGAAACTTCTGGAAGCACAAGACCTGCATACTACTGGGCCCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226768.2 |
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| CDS-3UTR CAA 90 bp | GAAATAAAGAGAAAGATATGCATTCCCCAGGATATCTGCAAGAGCAACAGCAGTTTCTGCAGAGAGACTTaGTTCTTGCAGTGGGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: EIKRKICIPQDICKSNSSFCRET*FLQWVR Trigger: CCTCACCCACTGCAAGAACAAAGTCTCTCTGCAGAA...ACTGCTGTTGCTCTTGCAGATATCCTGGGGAATGCATATCTTTCTCTTTATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228440.2 |
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| CDS CCA 72 bp | GGTGCCACTGTTCACACCAGGCTGCAGGGTGCTCAGTaGCTTAAGCTCCAGGGTCATCTTCTGCCCAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: GATVHTRLQGAQ*LKLQGHLLPRG Trigger: GCCTCTGGGCAGAAGATGACCCTGGAGCTTAAGCCACTGAGCACCCTGCAGCCTGGTGTGAACAGTGGCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006451.8 ENSMUST00000227751.2 |
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| CDS CCA 72 bp | GAATTCCAGGAGTTGCTGTTCTCGTTGCTGGGGCTCTaGCCACACAGGGTCCAGCGCTGCAGCCTGAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: EFQELLFSLLGL*PHRVQRCSLRE Trigger: TTCTCTCAGGCTGCAGCGCTGGACCCTGTGTGGCCAGAGCCCCAGCAACGAGAACAGCAACTCCTGGAATTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
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| CDS GCA 72 bp | TCGGTCTGCAGCTGGCGGAGCACCATGGACAAGTTCTaGAGAGAGACTTTGTTCTTGCAGTGGGTGAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SVCSWRSTMDKF*RETLFLQWVRA Trigger: AGCCCTCACCCACTGCAAGAACAAAGTCTCTCTGCAGAACTTGTCCATGGTGCTCCGCCAGCTGCAGACCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006451.8 ENSMUST00000226768.2 ENSMUST00000228440.2 |
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| CDS GCA 72 bp | CCATCAAGGACATCCATCTGCACGGCCAACTTAGCCTaGCGGACGCTGTCCATGACGTGGCGAGAATGTTCA | + |
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Preference number: 6 (lower is better) Translates to: PSRTSICTANLA*RTLSMTWRECS Trigger: TGAACATTCTCGCCACGTCATGGACAGCGTCCGGCAGGCTAAGTTGGCCGTGCAGATGGATGTCCTTGATGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006451.8 ENSMUST00000226768.2 ENSMUST00000228440.2 |
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| CDS TCA 72 bp | ACAAGTTCTGCAGAGAGACTTTGTTCTTGCAGTGGGTaGGGGCTCCTGAGAAGCAGGTGTGGGCAGACGCGA | + |
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Preference number: 6 (lower is better) Translates to: TSSAERLCSCSG*GLLRSRCGQTR Trigger: TCGCGTCTGCCCACACCTGCTTCTCAGGAGCCCTCACCCACTGCAAGAACAAAGTCTCTCTGCAGAACTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006451.8 ENSMUST00000226768.2 ENSMUST00000228440.2 |
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| CDS CAA 72 bp | TGGCGGAGCACCATGGACAAGTTCTGCAGAGAGACTTaGTTCTTGCAGTGGGTGAGGGCTCCTGAGAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: WRSTMDKFCRET*FLQWVRAPEKQ Trigger: CTGCTTCTCAGGAGCCCTCACCCACTGCAAGAACAAAGTCTCTCTGCAGAACTTGTCCATGGTGCTCCGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006451.8 ENSMUST00000226768.2 ENSMUST00000228440.2 |
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| CDS CCA 72 bp | CATCTCCAGAGTCGGTCTGCAGCTGGCGGAGCACCATaGACAAGTTCTGCAGAGAGACTTTGTTCTTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: HLQSRSAAGGAP*TSSAERLCSCS Trigger: ACTGCAAGAACAAAGTCTCTCTGCAGAACTTGTCCATGGTGCTCCGCCAGCTGCAGACCGACTCTGGAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006451.8 ENSMUST00000226768.2 ENSMUST00000228440.2 |
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| CDS TCA 72 bp | CTCTCCTCATATTTATGTAACGTCGCCCTGTTGAGATaGAGGTCAGGGTTGCTAGATGCTTTCCTGTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: LSSYLCNVALLR*RSGLLDAFLST Trigger: GGTGGACAGGAAAGCATCTAGCAACCCTGACCTTCATCTCAACAGGGCGACGTTACATAAATATGAGGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006451.8 |
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