Pregenerated sensors for TTC41 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044937Ensembl transcript IDs: ENSMUST00000061458.9, ENSMUST00000075632.14, ENSMUST00000217747.2, ENSMUST00000219108.2, ENSMUST00000219476.2
Found 220 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCTGTGGAAACAAAACAAGATTGTCCTTGGTGAGGATGAGGGACTaGACCAGCAGGGGGCAGCAGAAACAGAACAACCGAGAAACTGGG | + |
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Preference number: 1 (lower is better) Translates to: PCGNKTRLSLVRMRD*TSRGQQKQNNRETG Trigger: CCCAGTTTCTCGGTTGTTCTGTTTCTGCTGCCCCCTGCTGGTGCAGTCCCTCATCCTCACCAAGGACAATCTTGTTTTGTTTCCACAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
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| 3UTR GCA 90 bp | TGGCCTGCTAGTTTACACAAGGTGTCGCTGAGGCTTATACTCAGATaGTTCCTCACAAGCTTGCAGGTGGCCACCGTATCTGCCTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: WPASLHKVSLRLILR*FLTSLQVATVSAFS Trigger: GGAGAAGGCAGATACGGTGGCCACCTGCAAGCTTGTGAGGAAGCATCTGAGTATAAGCCTCAGCGACACCTTGTGTAAACTAGCAGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR TCA 90 bp | AGTCACCTGACAACAGCTGGCCTGCTAGTTTACACAAGGTGTCGCTaGGGCTTATACTCAGATGCTTCCTCACAAGCTTGCAGGTGGCCA | + |
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Preference number: 1 (lower is better) Translates to: SHLTTAGLLVYTRCR*GLYSDASSQACRWP Trigger: TGGCCACCTGCAAGCTTGTGAGGAAGCATCTGAGTATAAGCCTCAGCGACACCTTGTGTAAACTAGCAGGCCAGCTGTTGTCAGGTGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR TCA 90 bp | GCCCCAGGTGAGCTGCCCTTAAATCAAGTGACCTATACAAATAGCTaGCTGCCTCCATTGTGGCATGATGGCAGAAGTCACCTGACAACA | + |
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Preference number: 1 (lower is better) Translates to: APGELPLNQVTYTNS*LPPLWHDGRSHLTT Trigger: TGTTGTCAGGTGACTTCTGCCATCATGCCACAATGGAGGCAGTCAGCTATTTGTATAGGTCACTTGATTTAAGGGCAGCTCACCTGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR TCA 90 bp | GAAAAGCCATTCCTAGAACCGTTAGGGAATAGATGGTTCATGCTTTaGGGCCAAGACCTCCTGCCCCGGGACCTCTGGATTTCCCTTAAA | + |
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Preference number: 1 (lower is better) Translates to: EKPFLEPLGNRWFML*GQDLLPRDLWISLK Trigger: TTTAAGGGAAATCCAGAGGTCCCGGGGCAGGAGGTCTTGGCCTCAAAGCATGAACCATCTATTCCCTAACGGTTCTAGGAATGGCTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR CCA 90 bp | ACTGAGGAGTGTGGAAGAGCCACTTTTCTGACACGAGTTCCGATATaGACTTCCAGGGATTGTCCACATTATGAGGTAGCTGCAGGGGTT | + |
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Preference number: 1 (lower is better) Translates to: TEECGRATFLTRVPI*TSRDCPHYEVAAGV Trigger: AACCCCTGCAGCTACCTCATAATGTGGACAATCCCTGGAAGTCCATATCGGAACTCGTGTCAGAAAAGTGGCTCTTCCACACTCCTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR TCA 90 bp | CTGAGGAGTGAAGCAGTACTGAGGAGTGTGGAAGAGCCACTTTTCTaGCACGAGTTCCGATATGGACTTCCAGGGATTGTCCACATTATG | + |
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Preference number: 1 (lower is better) Translates to: LRSEAVLRSVEEPLF*HEFRYGLPGIVHIM Trigger: CATAATGTGGACAATCCCTGGAAGTCCATATCGGAACTCGTGTCAGAAAAGTGGCTCTTCCACACTCCTCAGTACTGCTTCACTCCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR GCA 90 bp | TTTGTGAGTCTGAAGCCTGACGTTGGAACTTTTCCTCAGCAGACTTaGACAGAATTGGAGCCAAGGTCTTCTTTCCTTTGCCGGGAACAT | + |
|
Preference number: 1 (lower is better) Translates to: FVSLKPDVGTFPQQT*TELEPRSSFLCREH Trigger: ATGTTCCCGGCAAAGGAAAGAAGACCTTGGCTCCAATTCTGTGCAAGTCTGCTGAGGAAAAGTTCCAACGTCAGGCTTCAGACTCACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR TCA 90 bp | CCGGAAGCCAACATGAGAACACCTTCAGTATATTTCATGGTAGCATaGTCACGGGGATTACCAGTCACGTACTTGGAGATTTCGGTAGCA | + |
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Preference number: 1 (lower is better) Translates to: PEANMRTPSVYFMVA*SRGLPVTYLEISVA Trigger: TGCTACCGAAATCTCCAAGTACGTGACTGGTAATCCCCGTGATCATGCTACCATGAAATATACTGAAGGTGTTCTCATGTTGGCTTCCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR TCA 90 bp | GCAGGTTGTCTTCTTGGACTATTCCATATTTGTGAGTCTGAAGCCTaGCGTTGGAACTTTTCCTCAGCAGACTTGCACAGAATTGGAGCC | + |
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Preference number: 1 (lower is better) Translates to: AGCLLGLFHICESEA*RWNFSSADLHRIGA Trigger: GGCTCCAATTCTGTGCAAGTCTGCTGAGGAAAAGTTCCAACGTCAGGCTTCAGACTCACAAATATGGAATAGTCCAAGAAGACAACCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR TCA 90 bp | TCATCCCAATCTCAAGATATAATTCCCCAATGGCATTCTGAGCTCTaGGCAGCATTTCTGTCATGGATGGGCTCTGTAGTAACAAGTCCT | + |
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Preference number: 1 (lower is better) Translates to: SSQSQDIIPQWHSEL*AAFLSWMGSVVTSP Trigger: AGGACTTGTTACTACAGAGCCCATCCATGACAGAAATGCTGCTCAGAGCTCAGAATGCCATTGGGGAATTATATCTTGAGATTGGGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR TCA 90 bp | AGCCAAGGTCTTCTTTCCTTTGCCGGGAACATATTTTGGTTTATCTaGAACCAGAGAAGGCTGTGTGCTTTTAACTCTCTGAAACCTACG | + |
|
Preference number: 1 (lower is better) Translates to: SQGLLSFAGNIFWFI*NQRRLCAFNSLKPT Trigger: CGTAGGTTTCAGAGAGTTAAAAGCACACAGCCTTCTCTGGTTTCAGATAAACCAAAATATGTTCCCGGCAAAGGAAAGAAGACCTTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR TCA 90 bp | TTTAGGTCGCTGAGTGTAAACCGCAGCAGATTTGACCAAGCTTTCTaGAAATATGTGAGTCCTTTCGGAGTCATCCCAATCTCAAGATAT | + |
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Preference number: 1 (lower is better) Translates to: FRSLSVNRSRFDQAF*KYVSPFGVIPISRY Trigger: ATATCTTGAGATTGGGATGACTCCGAAAGGACTCACATATTTTCAGAAAGCTTGGTCAAATCTGCTGCGGTTTACACTCAGCGACCTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR TCA 90 bp | TTGTTTGTTTTACCCCAACTAGGAAGGAAAGAGCTGTTACTAAACTaGGAAAGGTCTAGGAGAAAGTTGAAGAGGAAATCAGGCATCAAG | + |
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Preference number: 1 (lower is better) Translates to: LFVLPQLGRKELLLN*ERSRRKLKRKSGIK Trigger: CTTGATGCCTGATTTCCTCTTCAACTTTCTCCTAGACCTTTCTCAGTTTAGTAACAGCTCTTTCCTTCCTAGTTGGGGTAAAACAAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
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| 3UTR TCA 90 bp | CTACGTATATTCATACACATTGCAGTGTTTACCGTGTCAGAACTCTaGGCGCTGTGGAAGTTTAATTTAGGCACATTCTCCCATAATGAA | + |
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Preference number: 1 (lower is better) Translates to: LRIFIHIAVFTVSEL*ALWKFNLGTFSHNE Trigger: TTCATTATGGGAGAATGTGCCTAAATTAAACTTCCACAGCGCTCAGAGTTCTGACACGGTAAACACTGCAATGTGTATGAATATACGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR TCA 90 bp | CAAAACCAGTTGTTTTCTGGTCTTAGGAACTTTCTGGCTTTACTTTaGCAAGCGAGATGGGAGGTGTTTAAAGCAGTCTTGTTGGTATTT | + |
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Preference number: 1 (lower is better) Translates to: QNQLFSGLRNFLALL*QARWEVFKAVLLVF Trigger: AAATACCAACAAGACTGCTTTAAACACCTCCCATCTCGCTTGTCAAAGTAAAGCCAGAAAGTTCCTAAGACCAGAAAACAACTGGTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217747.2 |
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| 3UTR TCA 90 bp | TTTGGTTTATCTGAAACCAGAGAAGGCTGTGTGCTTTTAACTCTCTaGAACCTACGTATATTCATACACATTGCAGTGTTTACCGTGTCA | + |
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Preference number: 1 (lower is better) Translates to: FGLSETREGCVLLTL*NLRIFIHIAVFTVS Trigger: TGACACGGTAAACACTGCAATGTGTATGAATATACGTAGGTTTCAGAGAGTTAAAAGCACACAGCCTTCTCTGGTTTCAGATAAACCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR-3UTR GCA 90 bp | GGTTGCCGGCAGATGGAAGTGATCAGGCCCTTTCTGCTGTCCAGCTCAGCAGAACTTAAGGGGACAGGCTaGCTTTTTCCTGGCAGGTTG | + |
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Preference number: 2 (lower is better) Translates to: GCRQMEVIRPFLLSSSAELKGTG*LFPGRL Trigger: CAACCTGCCAGGAAAAAGGCAGCCTGTCCCCTTAAG...TTCTGCTGAGCTGGACAGCAGAAAGGGCCTGATCACTTCCATCTGCCGGCAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR-3UTR GCA 90 bp | AGGAAATCAGGCATCAAGGTGCCAGGAGAGCCAAGGTATATAGCACACCCTTTTGTGAGGATGAGGGACTaGACCAGCAGGGGGCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: RKSGIKVPGEPRYIAHPFVRMRD*TSRGQQ Trigger: CTGCTGCCCCCTGCTGGTGCAGTCCCTCATCCTCAC...AAAAGGGTGTGCTATATACCTTGGCTCTCCTGGCACCTTGATGCCTGATTTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGGTGTCGCTGAGGCTTATACTCAGATGCTTCCTCACAAGCTTGCAGGTGGCTGGCATTCTGAGCTCTaGGCAGCATTTCTGTCATGG | + |
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Preference number: 2 (lower is better) Translates to: QGVAEAYTQMLPHKLAGGWHSEL*AAFLSW Trigger: CCATGACAGAAATGCTGCTCAGAGCTCAGAATGCCA...GCCACCTGCAAGCTTGTGAGGAAGCATCTGAGTATAAGCCTCAGCGACACCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR-3UTR TCA 90 bp | GGCCAAGACCTCCTGCCCCGGGACCTCTGGATTTCCCTTAAAAGGTGTAGTATTTATTTCATGGTAGCATaGTCACGGGGATTACCAGTC | + |
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Preference number: 2 (lower is better) Translates to: GQDLLPRDLWISLKRCSIYFMVA*SRGLPV Trigger: GACTGGTAATCCCCGTGATCATGCTACCATGAAATA...AATACTACACCTTTTAAGGGAAATCCAGAGGTCCCGGGGCAGGAGGTCTTGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR-3UTR TCA 90 bp | ACTTTTCCTCAGCAGACTTGCACAGAATTGGAGCCAAGGTCTTCTTTCCTTTGCAGATGGTTCATGCTTTaGGGCCAAGACCTCCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: TFPQQTCTELEPRSSFLCRWFML*GQDLLP Trigger: GGGCAGGAGGTCTTGGCCTCAAAGCATGAACCATCT...GCAAAGGAAAGAAGACCTTGGCTCCAATTCTGTGCAAGTCTGCTGAGGAAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR CAA 90 bp | CACAAGGTGTCGCTGAGGCTTATACTCAGATGCTTCCTCACAAGCTaGCAGGTGGCCACCGTATCTGCCTTCTCCTTGATTTTTATGACT | + |
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Preference number: 2 (lower is better) Translates to: HKVSLRLILRCFLTS*QVATVSAFSLIFMT Trigger: AGTCATAAAAATCAAGGAGAAGGCAGATACGGTGGCCACCTGCAAGCTTGTGAGGAAGCATCTGAGTATAAGCCTCAGCGACACCTTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR-3UTR TCA 90 bp | GGCACATTCTCCCATAATGAAAAGCCATTCCTAGAACCGTTAGGGAATAGATGGGCCTCCATTGTGGCATaGTGGCAGAAGTCACCTGAC | + |
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Preference number: 2 (lower is better) Translates to: GTFSHNEKPFLEPLGNRWASIVA*WQKSPD Trigger: GTCAGGTGACTTCTGCCATCATGCCACAATGGAGGC...CCATCTATTCCCTAACGGTTCTAGGAATGGCTTTTCATTATGGGAGAATGTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR-3UTR CCA 90 bp | TGCACAGAATTGGAGCCAAGGTCTTCTTTCCTTTGCCGGGAACATATTTTGGTTCTGCCCCGGGACCTCTaGATTTCCCTTAAAAGGTGT | + |
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Preference number: 2 (lower is better) Translates to: CTELEPRSSFLCREHILVLPRDL*ISLKRC Trigger: ACACCTTTTAAGGGAAATCCAGAGGTCCCGGGGCAG...AACCAAAATATGTTCCCGGCAAAGGAAAGAAGACCTTGGCTCCAATTCTGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR CAA 90 bp | CTGAAGCCTGACGTTGGAACTTTTCCTCAGCAGACTTGCACAGAATaGGAGCCAAGGTCTTCTTTCCTTTGCCGGGAACATATTTTGGTT | + |
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Preference number: 2 (lower is better) Translates to: LKPDVGTFPQQTCTE*EPRSSFLCREHILV Trigger: AACCAAAATATGTTCCCGGCAAAGGAAAGAAGACCTTGGCTCCAATTCTGTGCAAGTCTGCTGAGGAAAAGTTCCAACGTCAGGCTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR-3UTR TCA 90 bp | GGCCAAGACCTCCTGCCCCGGGACCTCTGGATTTCCCTTAAAAGGTGTAGTATTTTTGACCAAGCTTTCTaGAAATATGTGAGTCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: GQDLLPRDLWISLKRCSIFDQAF*KYVSPF Trigger: GAAAGGACTCACATATTTTCAGAAAGCTTGGTCAAA...AATACTACACCTTTTAAGGGAAATCCAGAGGTCCCGGGGCAGGAGGTCTTGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGATGGAAGTGATCAGGCCCTTTCTGCTGTCCAGCTCAGCAGAAGAAACACTAAACCGCAGCAGATTTaGCCAAGCTTTCTGAAAATA | + |
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Preference number: 2 (lower is better) Translates to: ADGSDQALSAVQLSRRNTKPQQI*PSFLKI Trigger: TATTTTCAGAAAGCTTGGTCAAATCTGCTGCGGTTT...AGTGTTTCTTCTGCTGAGCTGGACAGCAGAAAGGGCCTGATCACTTCCATCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGATGGAAGTGATCAGGCCCTTTCTGCTGTCCAGCTCAGCAGAAGAAACACTATATTTTGGTTTATCTaGAACCAGAGAAGGCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: ADGSDQALSAVQLSRRNTIFWFI*NQRRLC Trigger: ACACAGCCTTCTCTGGTTTCAGATAAACCAAAATAT...AGTGTTTCTTCTGCTGAGCTGGACAGCAGAAAGGGCCTGATCACTTCCATCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR-3UTR CCA 90 bp | GTTTCCGGAAGCCAACATGAGAACACCTTCAGTATATTTCATGGTAGCATGATCTGCTTCATCAATTCCTaGCTGATCTTTAGGTCGCTG | + |
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Preference number: 2 (lower is better) Translates to: VSGSQHENTFSIFHGSMICFINS*LIFRSL Trigger: CAGCGACCTAAAGATCAGCCAGGAATTGATGAAGCA...GATCATGCTACCATGAAATATACTGAAGGTGTTCTCATGTTGGCTTCCGGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTCCGGAAGCCAACATGAGAACACCTTCAGTATATTTCATGGTAGCATGATCCTTTCTGAAAATATGTaGGTCCTTTCGGAGTCATCC | + |
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Preference number: 2 (lower is better) Translates to: VSGSQHENTFSIFHGSMILSENM*VLSESS Trigger: GGATGACTCCGAAAGGACTCACATATTTTCAGAAAG...GATCATGCTACCATGAAATATACTGAAGGTGTTCTCATGTTGGCTTCCGGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTTCTTGGACTATTCCATATTTGTGAGTCTGAAGCCTGACGTTGGAACTTTTGCAGCATTTCTGTCATaGATGGGCTCTGTAGTAACA | + |
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Preference number: 2 (lower is better) Translates to: VFLDYSIFVSLKPDVGTFAAFLS*MGSVVT Trigger: TGTTACTACAGAGCCCATCCATGACAGAAATGCTGC...AAAAGTTCCAACGTCAGGCTTCAGACTCACAAATATGGAATAGTCCAAGAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGTTTGTTTTACCCCAACTAGGAAGGAAAGAGCTGTTACTAAACTGAGAAAGAATCAGGCATCAAGGTaGCAGGAGAGCCAAGGTATA | + |
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Preference number: 2 (lower is better) Translates to: FVCFTPTRKERAVTKLRKNQASR*QESQGI Trigger: TATACCTTGGCTCTCCTGGCACCTTGATGCCTGATT...CTTTCTCAGTTTAGTAACAGCTCTTTCCTTCCTAGTTGGGGTAAAACAAACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCTGCCTTTTTCCTGGCAGGTTGTCTTCTTGGACTATTCCATATTTGTGAGTATCACTTTAACTTTCTaGTTCATCAATTCCTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: RLPFSWQVVFLDYSIFVSITLTF*FINSWL Trigger: CAGCCAGGAATTGATGAAGCAGAAAGTTAAAGTGAT...ACTCACAAATATGGAATAGTCCAAGAAGACAACCTGCCAGGAAAAAGGCAGCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR-3UTR CCA 90 bp | GGCACATTCTCCCATAATGAAAAGCCATTCCTAGAACCGTTAGGGAATAGATGGGCATATTCCAGAACGTaGTTTTCTTTTAAGAATTCC | + |
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Preference number: 2 (lower is better) Translates to: GTFSHNEKPFLEPLGNRWAYSRT*FSFKNS Trigger: GGAATTCTTAAAAGAAAACCACGTTCTGGAATATGC...CCATCTATTCCCTAACGGTTCTAGGAATGGCTTTTCATTATGGGAGAATGTGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR TCA 72 bp | TATGAGGTAGCTGCAGGGGTTGCCGGCAGATGGAAGTaGTCAGGCCCTTTCTGCTGTCCAGCTCAGCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: YEVAAGVAGRWK*SGPFCCPAQQK Trigger: CTTCTGCTGAGCTGGACAGCAGAAAGGGCCTGATCACTTCCATCTGCCGGCAACCCCTGCAGCTACCTCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR TCA 72 bp | TTCCTAGAACCGTTAGGGAATAGATGGTTCATGCTTTaGGGCCAAGACCTCCTGCCCCGGGACCTCTGGATT | + |
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Preference number: 3 (lower is better) Translates to: FLEPLGNRWFML*GQDLLPRDLWI Trigger: AATCCAGAGGTCCCGGGGCAGGAGGTCTTGGCCTCAAAGCATGAACCATCTATTCCCTAACGGTTCTAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR-3UTR CAA 90 bp | GGTTGCCGGCAGATGGAAGTGATCAGGCCCTTTCTGCTGTCCAGCTCAGCAGAAAAGGTCTTCTTTCCTTaGCCGGGAACATATTTTGGT | + |
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Preference number: 3 (lower is better) Translates to: GCRQMEVIRPFLLSSSAEKVFFP*PGTYFG Trigger: ACCAAAATATGTTCCCGGCAAAGGAAAGAAGACCTT...TTCTGCTGAGCTGGACAGCAGAAAGGGCCTGATCACTTCCATCTGCCGGCAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR TCA 72 bp | TCTGCTGTCCAGCTCAGCAGAAGAAACACTCTGCCTTaGGAGTCTCACCAAGCCGTTCTTGTCAATGAGCGA | + |
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Preference number: 3 (lower is better) Translates to: SAVQLSRRNTLP*ESHQAVLVNER Trigger: TCGCTCATTGACAAGAACGGCTTGGTGAGACTCTCAAGGCAGAGTGTTTCTTCTGCTGAGCTGGACAGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR GCA 72 bp | AACAAAACAAGATTGTCCTTGGTGAGGATGAGGGACTaGACCAGCAGGGGGCAGCAGAAACAGAACAACCGA | + |
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Preference number: 3 (lower is better) Translates to: NKTRLSLVRMRD*TSRGQQKQNNR Trigger: TCGGTTGTTCTGTTTCTGCTGCCCCCTGCTGGTGCAGTCCCTCATCCTCACCAAGGACAATCTTGTTTTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
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| 3UTR GCA 72 bp | GGAATAGATGGTTCATGCTTTGAGGCCAAGACCTCCTaGCCCGGGACCTCTGGATTTCCCTTAAAAGGTGTA | + |
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Preference number: 3 (lower is better) Translates to: GIDGSCFEAKTS*PGTSGFPLKGV Trigger: TACACCTTTTAAGGGAAATCCAGAGGTCCCGGGGCAGGAGGTCTTGGCCTCAAAGCATGAACCATCTATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR GCA 72 bp | CCCTTTCTGCTGTCCAGCTCAGCAGAAGAAACACTCTaGCTTGAGAGTCTCACCAAGCCGTTCTTGTCAATG | + |
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Preference number: 3 (lower is better) Translates to: PFLLSSSAEETL*LESLTKPFLSM Trigger: CATTGACAAGAACGGCTTGGTGAGACTCTCAAGGCAGAGTGTTTCTTCTGCTGAGCTGGACAGCAGAAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR TCA 72 bp | ACAACAGCTGGCCTGCTAGTTTACACAAGGTGTCGCTaGGGCTTATACTCAGATGCTTCCTCACAAGCTTGC | + |
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Preference number: 3 (lower is better) Translates to: TTAGLLVYTRCR*GLYSDASSQAC Trigger: GCAAGCTTGTGAGGAAGCATCTGAGTATAAGCCTCAGCGACACCTTGTGTAAACTAGCAGGCCAGCTGTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR TCA 72 bp | GAAGCAGTACTGAGGAGTGTGGAAGAGCCACTTTTCTaGCACGAGTTCCGATATGGACTTCCAGGGATTGTC | + |
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Preference number: 3 (lower is better) Translates to: EAVLRSVEEPLF*HEFRYGLPGIV Trigger: GACAATCCCTGGAAGTCCATATCGGAACTCGTGTCAGAAAAGTGGCTCTTCCACACTCCTCAGTACTGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR GCA 72 bp | AGTTTACACAAGGTGTCGCTGAGGCTTATACTCAGATaGTTCCTCACAAGCTTGCAGGTGGCCACCGTATCT | + |
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Preference number: 3 (lower is better) Translates to: SLHKVSLRLILR*FLTSLQVATVS Trigger: AGATACGGTGGCCACCTGCAAGCTTGTGAGGAAGCATCTGAGTATAAGCCTCAGCGACACCTTGTGTAAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR GCA 72 bp | CTTGTCAATGAGCGAGACCGTCTTAAGGGGACAGGCTaGCTTTTTCCTGGCAGGTTGTCTTCTTGGACTATT | + |
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Preference number: 3 (lower is better) Translates to: LVNERDRLKGTG*LFPGRLSSWTI Trigger: AATAGTCCAAGAAGACAACCTGCCAGGAAAAAGGCAGCCTGTCCCCTTAAGACGGTCTCGCTCATTGACAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR GCA 72 bp | CTGAAGCCTGACGTTGGAACTTTTCCTCAGCAGACTTaGACAGAATTGGAGCCAAGGTCTTCTTTCCTTTGC | + |
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Preference number: 3 (lower is better) Translates to: LKPDVGTFPQQT*TELEPRSSFLC Trigger: GCAAAGGAAAGAAGACCTTGGCTCCAATTCTGTGCAAGTCTGCTGAGGAAAAGTTCCAACGTCAGGCTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
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| 3UTR-3UTR CAA 90 bp | AGGAAATCAGGCATCAAGGTGCCAGGAGAGCCAAGGTATATAGCACACCCTTTTAAAACAAGATTGTCCTaGGTGAGGATGAGGGACTGC | + |
|
Preference number: 3 (lower is better) Translates to: RKSGIKVPGEPRYIAHPFKTRLS*VRMRDC Trigger: GCAGTCCCTCATCCTCACCAAGGACAATCTTGTTTT...AAAAGGGTGTGCTATATACCTTGGCTCTCCTGGCACCTTGATGCCTGATTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| 3UTR TCA 72 bp | GAGCTGCCCTTAAATCAAGTGACCTATACAAATAGCTaGCTGCCTCCATTGTGGCATGATGGCAGAAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: ELPLNQVTYTNS*LPPLWHDGRSH Trigger: GTGACTTCTGCCATCATGCCACAATGGAGGCAGTCAGCTATTTGTATAGGTCACTTGATTTAAGGGCAGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
||
| 3UTR CCA 72 bp | ACGTTGGAACTTTTCCTCAGCAGACTTGCACAGAATTaGAGCCAAGGTCTTCTTTCCTTTGCCGGGAACATA | + |
|
Preference number: 3 (lower is better) Translates to: TLELFLSRLAQN*SQGLLSFAGNI Trigger: TATGTTCCCGGCAAAGGAAAGAAGACCTTGGCTCCAATTCTGTGCAAGTCTGCTGAGGAAAAGTTCCAACGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
||
| 3UTR CCA 72 bp | TGTGGAAGAGCCACTTTTCTGACACGAGTTCCGATATaGACTTCCAGGGATTGTCCACATTATGAGGTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: CGRATFLTRVPI*TSRDCPHYEVA Trigger: AGCTACCTCATAATGTGGACAATCCCTGGAAGTCCATATCGGAACTCGTGTCAGAAAAGTGGCTCTTCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
||
| 3UTR TCA 72 bp | ATCCCAATCTCAAGATATAATTCCCCAATGGCATTCTaGGCTCTGAGCAGCATTTCTGTCATGGATGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: IPISRYNSPMAF*ALSSISVMDGL Trigger: GAGCCCATCCATGACAGAAATGCTGCTCAGAGCTCAGAATGCCATTGGGGAATTATATCTTGAGATTGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
||
| 3UTR TCA 72 bp | TCTCAAGATATAATTCCCCAATGGCATTCTGAGCTCTaGGCAGCATTTCTGTCATGGATGGGCTCTGTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: SQDIIPQWHSEL*AAFLSWMGSVV Trigger: TACTACAGAGCCCATCCATGACAGAAATGCTGCTCAGAGCTCAGAATGCCATTGGGGAATTATATCTTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
||
| 3UTR TCA 72 bp | CTTCTTGGACTATTCCATATTTGTGAGTCTGAAGCCTaGCGTTGGAACTTTTCCTCAGCAGACTTGCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: LLGLFHICESEA*RWNFSSADLHR Trigger: TCTGTGCAAGTCTGCTGAGGAAAAGTTCCAACGTCAGGCTTCAGACTCACAAATATGGAATAGTCCAAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
||
| 3UTR TCA 72 bp | TTGCCAAATAGCCATCTTCTGATAGTTAAACACTCTTaGAACTTGAGTTTTGCCAGGGCTGCGTTTCCGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LPNSHLLIVKHS*NLSFARAAFPE Trigger: TTCCGGAAACGCAGCCCTGGCAAAACTCAAGTTTCAAGAGTGTTTAACTATCAGAAGATGGCTATTTGGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
||
| 3UTR TCA 72 bp | TTCATACACATTGCAGTGTTTACCGTGTCAGAACTCTaGGCGCTGTGGAAGTTTAATTTAGGCACATTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: FIHIAVFTVSEL*ALWKFNLGTFS Trigger: GGAGAATGTGCCTAAATTAAACTTCCACAGCGCTCAGAGTTCTGACACGGTAAACACTGCAATGTGTATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
||
| 3UTR TCA 72 bp | ACCGCAGCAGATTTGACCAAGCTTTCTGAAAATATGTaGGTCCTTTCGGAGTCATCCCAATCTCAAGATATA | + |
|
Preference number: 3 (lower is better) Translates to: TAADLTKLSENM*VLSESSQSQDI Trigger: TATATCTTGAGATTGGGATGACTCCGAAAGGACTCACATATTTTCAGAAAGCTTGGTCAAATCTGCTGCGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
||
| 3UTR TCA 72 bp | AACATGAGAACACCTTCAGTATATTTCATGGTAGCATaGTCACGGGGATTACCAGTCACGTACTTGGAGATT | + |
|
Preference number: 3 (lower is better) Translates to: NMRTPSVYFMVA*SRGLPVTYLEI Trigger: AATCTCCAAGTACGTGACTGGTAATCCCCGTGATCATGCTACCATGAAATATACTGAAGGTGTTCTCATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
||
| 3UTR TCA 72 bp | CTTCTTTCCTTTGCCGGGAACATATTTTGGTTTATCTaGAACCAGAGAAGGCTGTGTGCTTTTAACTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LLSFAGNIFWFI*NQRRLCAFNSL Trigger: CAGAGAGTTAAAAGCACACAGCCTTCTCTGGTTTCAGATAAACCAAAATATGTTCCCGGCAAAGGAAAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
||
| 3UTR TCA 72 bp | TTGTTTTCTGGTCTTAGGAACTTTCTGGCTTTACTTTaGCAAGCGAGATGGGAGGTGTTTAAAGCAGTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LFSGLRNFLALL*QARWEVFKAVL Trigger: CAAGACTGCTTTAAACACCTCCCATCTCGCTTGTCAAAGTAAAGCCAGAAAGTTCCTAAGACCAGAAAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217747.2 |
||
| 3UTR GCA 72 bp | ATGCTTCCTCACAAGCTTGCAGGTGGCCACCGTATCTaGCTTCTCCTTGATTTTTATGACTTGTTTATAATA | + |
|
Preference number: 3 (lower is better) Translates to: MLPHKLAGGHRI*LLLDFYDLFII Trigger: TATTATAAACAAGTCATAAAAATCAAGGAGAAGGCAGATACGGTGGCCACCTGCAAGCTTGTGAGGAAGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
||
| 3UTR TCA 72 bp | TTACCCCAACTAGGAAGGAAAGAGCTGTTACTAAACTaGGAAAGGTCTAGGAGAAAGTTGAAGAGGAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: LPQLGRKELLLN*ERSRRKLKRKS Trigger: TGATTTCCTCTTCAACTTTCTCCTAGACCTTTCTCAGTTTAGTAACAGCTCTTTCCTTCCTAGTTGGGGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| 3UTR-3UTR CAA 90 bp | ACGTACTTGGAGATTTCGGTAGCATATTCCAGAACGTGGTTTTCTTTTAAGAATAGCTTTTCAGCTTCATaGATCTTGCCCATTAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: TYLEISVAYSRTWFSFKNSFSAS*ILPISF Trigger: GAAGCTAATGGGCAAGATCAATGAAGCTGAAAAGCT...ATTCTTAAAAGAAAACCACGTTCTGGAATATGCTACCGAAATCTCCAAGTACGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
||
| CDS-3UTR TCA 90 bp | GATGAGGGACTGCACCAGCAGGGGGCAGCAGAAACAGAACAACCGAGAAACTGGGCAGCTCGCTGGCGATaGTTGCGAGCTTCAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DEGLHQQGAAETEQPRNWAARWR*LRASEG Trigger: GCCCTCTGAAGCTCGCAATCATCGCCAGCGAGCTGC...CCAGTTTCTCGGTTGTTCTGTTTCTGCTGCCCCCTGCTGGTGCAGTCCCTCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| CDS-3UTR TCA 90 bp | GGCCAAGACCTCCTGCCCCGGGACCTCTGGATTTCCCTTAAAAGGTGTAGTATTTGCCAGGGCAGCTCCTaGTACACCCTCCAGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: GQDLLPRDLWISLKRCSICQGSS*YTLQKM Trigger: CATCTTCTGGAGGGTGTATCAGGAGCTGCCCTGGCA...AATACTACACCTTTTAAGGGAAATCCAGAGGTCCCGGGGCAGGAGGTCTTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
||
| CDS-3UTR CCA 90 bp | GATGAGGGACTGCACCAGCAGGGGGCAGCAGAAACAGAACAACCGAGAAACTGGACTGCCCACAAAGTATaGGATCATCAGCACTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: DEGLHQQGAAETEQPRNWTAHKV*DHQHSG Trigger: CCCGGAGTGCTGATGATCCCATACTTTGTGGGCAGT...CCAGTTTCTCGGTTGTTCTGTTTCTGCTGCCCCCTGCTGGTGCAGTCCCTCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| CDS-3UTR TCA 90 bp | GATGAGGGACTGCACCAGCAGGGGGCAGCAGAAACAGAACAACCGAGAAACTGGGGTCTCTGTAGAATCTaGCAGGAAGCCCTTTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: DEGLHQQGAAETEQPRNWGLCRI*QEALCQ Trigger: TTGGCAAAGGGCTTCCTGTCAGATTCTACAGAGACC...CCAGTTTCTCGGTTGTTCTGTTTCTGCTGCCCCCTGCTGGTGCAGTCCCTCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| CDS-3UTR GCA 90 bp | AGGATGAGGGACTGCACCAGCAGGGGGCAGCAGAAACAGAACAACCGAGAAACTTCGGCAGGGGAGAGGTaGTGTCTGAAGATGTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RMRDCTSRGQQKQNNRETSAGER*CLKMLN Trigger: GTTCAACATCTTCAGACAGCACCTCTCCCCTGCCGA...AGTTTCTCGGTTGTTCTGTTTCTGCTGCCCCCTGCTGGTGCAGTCCCTCATCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| CDS-3UTR CCA 90 bp | AGGATGAGGGACTGCACCAGCAGGGGGCAGCAGAAACAGAACAACCGAGAAACTAGTTGGCAATCAGTGTaGACTTCCCACAGCCGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: RMRDCTSRGQQKQNNRETSWQSV*TSHSRV Trigger: AACGCGGCTGTGGGAAGTCCACACTGATTGCCAACT...AGTTTCTCGGTTGTTCTGTTTCTGCTGCCCCCTGCTGGTGCAGTCCCTCATCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| CDS-3UTR CCA 90 bp | AGGATGAGGGACTGCACCAGCAGGGGGCAGCAGAAACAGAACAACCGAGAAACTACTTGCAGGACAGACTaGAGGAGACGCTGCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RMRDCTSRGQQKQNNRETTCRTD*RRRCSE Trigger: TTCTGAGCAGCGTCTCCTCCAGTCTGTCCTGCAAGT...AGTTTCTCGGTTGTTCTGTTTCTGCTGCCCCCTGCTGGTGCAGTCCCTCATCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| CDS-3UTR GCA 90 bp | AGGAAATCAGGCATCAAGGTGCCAGGAGAGCCAAGGTATATAGCACACCCTTTTGGGCACACAGCGACTTaGAGGACAGACTGGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKSGIKVPGEPRYIAHPFGHTAT*RTDWRR Trigger: TCTCCTCCAGTCTGTCCTGCAAGTCGCTGTGTGCCC...AAAAGGGTGTGCTATATACCTTGGCTCTCCTGGCACCTTGATGCCTGATTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| CDS-3UTR GCA 90 bp | GAGGAAATCAGGCATCAAGGTGCCAGGAGAGCCAAGGTATATAGCACACCCTTTAACTCCCAGAGCTCCTaGACAGAGGCAACCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EEIRHQGARRAKVYSTPFNSQSS*TEATSK Trigger: CTTGGAGGTTGCCTCTGTGCAGGAGCTCTGGGAGTT...AAAGGGTGTGCTATATACCTTGGCTCTCCTGGCACCTTGATGCCTGATTTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| CDS-3UTR CCA 90 bp | TGTCCAGCTCAGCAGAAGAAACACTCTGCCTTGAGAGTCTCACCAAGCCGTTCTACACCCTCCAGAAGATaGTTTGCCGCTGGAAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: CPAQQKKHSALRVSPSRSTPSRR*FAAGRT Trigger: GGTTCTTCCAGCGGCAAACCATCTTCTGGAGGGTGT...AGAACGGCTTGGTGAGACTCTCAAGGCAGAGTGTTTCTTCTGCTGAGCTGGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
||
| CDS-3UTR GCA 90 bp | GGGACTGCACCAGCAGGGGGCAGCAGAAACAGAACAACCGAGAAACTGGGACAATTTCTTCCGGAATACTaGTTGGATGATCTCGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: GTAPAGGSRNRTTEKLGQFLPEY*LDDLEL Trigger: GAGTTCGAGATCATCCAAGCAGTATTCCGGAAGAAA...TTGTCCCAGTTTCTCGGTTGTTCTGTTTCTGCTGCCCCCTGCTGGTGCAGTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| 3UTR CAA 72 bp | TCGCTGAGGCTTATACTCAGATGCTTCCTCACAAGCTaGCAGGTGGCCACCGTATCTGCCTTCTCCTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: SLRLILRCFLTS*QVATVSAFSLI Trigger: AATCAAGGAGAAGGCAGATACGGTGGCCACCTGCAAGCTTGTGAGGAAGCATCTGAGTATAAGCCTCAGCGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
||
| CDS-3UTR TCA 90 bp | ACCCTTTTAGTCCCAGAACTCGGGAGGCAGAAGCAGATGGAGCTGTGTGAGTTTAGACGCTGCTCAGAATaGATTTACAGTGAGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLLVPELGRQKQMELCEFRRCSE*IYSEEA Trigger: TGCCTCCTCACTGTAAATTCATTCTGAGCAGCGTCT...AAACTCACACAGCTCCATCTGCTTCTGCCTCCCGAGTTCTGGGACTAAAAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCAGGGGGCAGCAGAAACAGAACAACCGAGAAACTGGGACAAACAAGTCTTCCGGGGTGTTTGCTTTaGAAATTACTGACCCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PAGGSRNRTTEKLGQTSLPGCLL*KLLTQL Trigger: CAACTGGGTCAGTAATTTCCAAAGCAAACACCCCGG...AAGACTTGTTTGTCCCAGTTTCTCGGTTGTTCTGTTTCTGCTGCCCCCTGCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| CDS-3UTR GCA 90 bp | CCAGCAGGGGGCAGCAGAAACAGAACAACCGAGAAACTGGGACAAACAAGTCTTGACACTGGAACTCATTaGGGTAGATTTTGCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PAGGSRNRTTEKLGQTSLDTGTH*GRFCTP Trigger: AGGAGTGCAAAATCTACCGCAATGAGTTCCAGTGTC...AAGACTTGTTTGTCCCAGTTTCTCGGTTGTTCTGTTTCTGCTGCCCCCTGCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| 3UTR CAA 72 bp | GACGTTGGAACTTTTCCTCAGCAGACTTGCACAGAATaGGAGCCAAGGTCTTCTTTCCTTTGCCGGGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: DVGTFPQQTCTE*EPRSSFLCREH Trigger: ATGTTCCCGGCAAAGGAAAGAAGACCTTGGCTCCAATTCTGTGCAAGTCTGCTGAGGAAAAGTTCCAACGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
||
| CDS-3UTR TCA 90 bp | AGGATGAGGGACTGCACCAGCAGGGGGCAGCAGAAACAGAACAACCGAGAAACTTTCAAAGGTTCTGTTTaGCTCCTTGGAAGTAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: RMRDCTSRGQQKQNNRETFKGSV*LLGSNK Trigger: TTTGTTACTTCCAAGGAGTCAAACAGAACCTTTGAA...AGTTTCTCGGTTGTTCTGTTTCTGCTGCCCCCTGCTGGTGCAGTCCCTCATCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| CDS-3UTR CCA 90 bp | ACCCTTTTAGTCCCAGAACTCGGGAGGCAGAAGCAGATGGAGCTGTGTGAGTTTCAGACAAGAGCAAAATaGACTTACAAGTTGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLLVPELGRQKQMELCEFQTRAK*TYKLEG Trigger: CCCTTCCAACTTGTAAGTCCATTTTGCTCTTGTCTG...AAACTCACACAGCTCCATCTGCTTCTGCCTCCCGAGTTCTGGGACTAAAAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| CDS-3UTR TCA 90 bp | CCAGCAGGGGGCAGCAGAAACAGAACAACCGAGAAACTGGGACAAACAAGTCTTAAAGACCAAGACATTTaGGTCCTCGTTAAGGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: PAGGSRNRTTEKLGQTSLKDQDI*VLVKEI Trigger: GATTTCCTTAACGAGGACTCAAATGTCTTGGTCTTT...AAGACTTGTTTGTCCCAGTTTCTCGGTTGTTCTGTTTCTGCTGCCCCCTGCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCAGGGGGCAGCAGAAACAGAACAACCGAGAAACTGGGACAAACAAGTCTTATATGTAAGGTAGGATaGGTTTCTGGCGCTTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PAGGSRNRTTEKLGQTSLICKVG*VSGALK Trigger: TTTTAAAGCGCCAGAAACCCATCCTACCTTACATAT...AAGACTTGTTTGTCCCAGTTTCTCGGTTGTTCTGTTTCTGCTGCCCCCTGCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCAGGGGGCAGCAGAAACAGAACAACCGAGAAACTGGGACAAACAAGTCTTAATGGACTTACAAGTTaGAAGGGAATTGATTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PAGGSRNRTTEKLGQTSLNGLTS*KGIDSE Trigger: CTCAGAATCAATTCCCTTCCAACTTGTAAGTCCATT...AAGACTTGTTTGTCCCAGTTTCTCGGTTGTTCTGTTTCTGCTGCCCCCTGCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| CDS-3UTR CCA 90 bp | TACTTTGACAAGCGAGATGGGAGGTGTTTAAAGCAGTCTTGTTGGTATTTATATTGGCCCGGTTACCGTTaGCTCTGTGCTGAAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YFDKRDGRCLKQSCWYLYWPGYR*LCAEAP Trigger: TGGAGCTTCAGCACAGAGCCAACGGTAACCGGGCCA...ATATAAATACCAACAAGACTGCTTTAAACACCTCCCATCTCGCTTGTCAAAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR CCA 90 bp | GACAAGCGAGATGGGAGGTGTTTAAAGCAGTCTTGTTGGTATTTATATAAAGTATGGCCCGGTTACCGTTaGCTCTGTGCTGAAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DKRDGRCLKQSCWYLYKVWPGYR*LCAEAP Trigger: TGGAGCTTCAGCACAGAGCCAACGGTAACCGGGCCA...TACTTTATATAAATACCAACAAGACTGCTTTAAACACCTCCCATCTCGCTTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR CCA 90 bp | CTTTACTTTGACAAGCGAGATGGGAGGTGTTTAAAGCAGTCTTGTTGGTATTTAAGTTGGCAATCAGTGTaGACTTCCCACAGCCGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LYFDKRDGRCLKQSCWYLSWQSV*TSHSRV Trigger: AACGCGGCTGTGGGAAGTCCACACTGATTGCCAACT...TAAATACCAACAAGACTGCTTTAAACACCTCCCATCTCGCTTGTCAAAGTAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR CCA 90 bp | TGGCTTTACTTTGACAAGCGAGATGGGAGGTGTTTAAAGCAGTCTTGTTGGTATCCGGGGTGTTTGCTTTaGAAATTACTGACCCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WLYFDKRDGRCLKQSCWYPGCLL*KLLTQL Trigger: CAACTGGGTCAGTAATTTCCAAAGCAAACACCCCGG...ATACCAACAAGACTGCTTTAAACACCTCCCATCTCGCTTGTCAAAGTAAAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR TCA 90 bp | CTTTACTTTGACAAGCGAGATGGGAGGTGTTTAAAGCAGTCTTGTTGGTATTTAGGTCTCTGTAGAATCTaGCAGGAAGCCCTTTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LYFDKRDGRCLKQSCWYLGLCRI*QEALCQ Trigger: TTGGCAAAGGGCTTCCTGTCAGATTCTACAGAGACC...TAAATACCAACAAGACTGCTTTAAACACCTCCCATCTCGCTTGTCAAAGTAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR CCA 90 bp | GAGACCCTGTGGAAACAAAACAAGATTGTCCTTGGTGAGGATGAGGGACTGCACAAGGGTAACCATTTTTaGCAGCAATGTATAGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: ETLWKQNKIVLGEDEGLHKGNHF*QQCIDS Trigger: AGAATCTATACATTGCTGCCAAAAATGGTTACCCTT...GTGCAGTCCCTCATCCTCACCAAGGACAATCTTGTTTTGTTTCCACAGGGTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| CDS-3UTR CCA 90 bp | TCTTGTTGGTATTTATATAAAGTAAAAGTGGAGTTCAGAGAGACTAGCAGGGGAACTGCCCACAAAGTATaGGATCATCAGCACTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SCWYLYKVKVEFRETSRGTAHKV*DHQHSG Trigger: CCCGGAGTGCTGATGATCCCATACTTTGTGGGCAGT...TCCCCTGCTAGTCTCTCTGAACTCCACTTTTACTTTATATAAATACCAACAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR CCA 90 bp | TGTTGGTATTTATATAAAGTAAAAGTGGAGTTCAGAGAGACTAGCAGGGGACTTACTGCCCACAAAGTATaGGATCATCAGCACTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: CWYLYKVKVEFRETSRGLTAHKV*DHQHSG Trigger: CCCGGAGTGCTGATGATCCCATACTTTGTGGGCAGT...AAGTCCCCTGCTAGTCTCTCTGAACTCCACTTTTACTTTATATAAATACCAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| 3UTR CAA 72 bp | TCAGCGCTCAAGAACAGCTTTTCAGCTTCATTGATCTaGCCCATTAGCTTCAGGAAACTTCCAATAAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SALKNSFSASLI*PISFRKLPIKR Trigger: CCTCTTTATTGGAAGTTTCCTGAAGCTAATGGGCAAGATCAATGAAGCTGAAAAGCTGTTCTTGAGCGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
||
| 3UTR CAA 72 bp | AAGTCCTCAGCGCTCAAGAACAGCTTTTCAGCTTCATaGATCTTGCCCATTAGCTTCAGGAAACTTCCAATA | + |
|
Preference number: 4 (lower is better) Translates to: KSSALKNSFSAS*ILPISFRKLPI Trigger: TATTGGAAGTTTCCTGAAGCTAATGGGCAAGATCAATGAAGCTGAAAAGCTGTTCTTGAGCGCTGAGGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219476.2 |
||
| CDS-3UTR TCA 90 bp | TGTTGGTATTTATATAAAGTAAAAGTGGAGTTCAGAGAGACTAGCAGGGGACTTGGTCTCTGTAGAATCTaGCAGGAAGCCCTTTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CWYLYKVKVEFRETSRGLGLCRI*QEALCQ Trigger: TTGGCAAAGGGCTTCCTGTCAGATTCTACAGAGACC...AAGTCCCCTGCTAGTCTCTCTGAACTCCACTTTTACTTTATATAAATACCAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR GCA 90 bp | TGGCTTTACTTTGACAAGCGAGATGGGAGGTGTTTAAAGCAGTCTTGTTGGTATTTTCTTCCGGAATACTaGTTGGATGATCTCGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: WLYFDKRDGRCLKQSCWYFLPEY*LDDLEL Trigger: GAGTTCGAGATCATCCAAGCAGTATTCCGGAAGAAA...ATACCAACAAGACTGCTTTAAACACCTCCCATCTCGCTTGTCAAAGTAAAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR CCA 90 bp | AAGCAGTCTTGTTGGTATTTATATAAAGTAAAAGTGGAGTTCAGAGAGACTAGCAGTTGGCAATCAGTGTaGACTTCCCACAGCCGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: KQSCWYLYKVKVEFRETSSWQSV*TSHSRV Trigger: AACGCGGCTGTGGGAAGTCCACACTGATTGCCAACT...GCTAGTCTCTCTGAACTCCACTTTTACTTTATATAAATACCAACAAGACTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR CCA 90 bp | GACAAGCGAGATGGGAGGTGTTTAAAGCAGTCTTGTTGGTATTTATATAAAGTACCGGGGTGTTTGCTTTaGAAATTACTGACCCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: DKRDGRCLKQSCWYLYKVPGCLL*KLLTQL Trigger: CAACTGGGTCAGTAATTTCCAAAGCAAACACCCCGG...TACTTTATATAAATACCAACAAGACTGCTTTAAACACCTCCCATCTCGCTTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR TCA 90 bp | AAGCAGTCTTGTTGGTATTTATATAAAGTAAAAGTGGAGTTCAGAGAGACTAGCGTTCAACAGATATGCTaGGGACAGCTTCTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KQSCWYLYKVKVEFRETSVQQIC*GQLLLF Trigger: GAAGAGGAGAAGCTGTCCTCAGCATATCTGTTGAAC...GCTAGTCTCTCTGAACTCCACTTTTACTTTATATAAATACCAACAAGACTGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR TCA 90 bp | TTTGACAAGCGAGATGGGAGGTGTTTAAAGCAGTCTTGTTGGTATTTATATAAAGTTCAACAGATATGCTaGGGACAGCTTCTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FDKRDGRCLKQSCWYLYKVQQIC*GQLLLF Trigger: GAAGAGGAGAAGCTGTCCTCAGCATATCTGTTGAAC...TTTATATAAATACCAACAAGACTGCTTTAAACACCTCCCATCTCGCTTGTCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR CCA 90 bp | CTTTACTTTGACAAGCGAGATGGGAGGTGTTTAAAGCAGTCTTGTTGGTATTTACAGACAAGAGCAAAATaGACTTACAAGTTGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LYFDKRDGRCLKQSCWYLQTRAK*TYKLEG Trigger: CCCTTCCAACTTGTAAGTCCATTTTGCTCTTGTCTG...TAAATACCAACAAGACTGCTTTAAACACCTCCCATCTCGCTTGTCAAAGTAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR GCA 90 bp | TGTTGGTATTTATATAAAGTAAAAGTGGAGTTCAGAGAGACTAGCAGGGGACTTTTTCTTCCGGAATACTaGTTGGATGATCTCGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: CWYLYKVKVEFRETSRGLFLPEY*LDDLEL Trigger: GAGTTCGAGATCATCCAAGCAGTATTCCGGAAGAAA...AAGTCCCCTGCTAGTCTCTCTGAACTCCACTTTTACTTTATATAAATACCAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR CCA 90 bp | TGGCTTTACTTTGACAAGCGAGATGGGAGGTGTTTAAAGCAGTCTTGTTGGTATCTTGAAAATCTAGAGTaGAACATATGTAAGGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WLYFDKRDGRCLKQSCWYLENLE*NICKVG Trigger: TCCTACCTTACATATGTTCCACTCTAGATTTTCAAG...ATACCAACAAGACTGCTTTAAACACCTCCCATCTCGCTTGTCAAAGTAAAGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR CCA 90 bp | TGGCTTTACTTTGACAAGCGAGATGGGAGGTGTTTAAAGCAGTCTTGTTGGTATAAGGGTAACCATTTTTaGCAGCAATGTATAGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: WLYFDKRDGRCLKQSCWYKGNHF*QQCIDS Trigger: AGAATCTATACATTGCTGCCAAAAATGGTTACCCTT...ATACCAACAAGACTGCTTTAAACACCTCCCATCTCGCTTGTCAAAGTAAAGCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR CCA 90 bp | TACTTTGACAAGCGAGATGGGAGGTGTTTAAAGCAGTCTTGTTGGTATTTATATCAGACAAGAGCAAAATaGACTTACAAGTTGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YFDKRDGRCLKQSCWYLYQTRAK*TYKLEG Trigger: CCCTTCCAACTTGTAAGTCCATTTTGCTCTTGTCTG...ATATAAATACCAACAAGACTGCTTTAAACACCTCCCATCTCGCTTGTCAAAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR GCA 90 bp | TGGTATTTATATAAAGTAAAAGTGGAGTTCAGAGAGACTAGCAGGGGACTTGTCGAAGTAACAAAAACTTaGTTGCAGTTCTCCACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: WYLYKVKVEFRETSRGLVEVTKT*LQFSTN Trigger: GTTTGTGGAGAACTGCAAGCAAGTTTTTGTTACTTC...GACAAGTCCCCTGCTAGTCTCTCTGAACTCCACTTTTACTTTATATAAATACCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR CCA 90 bp | TGGTATTTATATAAAGTAAAAGTGGAGTTCAGAGAGACTAGCAGGGGACTTGTCATATGTAAGGTAGGATaGGTTTCTGGCGCTTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: WYLYKVKVEFRETSRGLVICKVG*VSGALK Trigger: TTTTAAAGCGCCAGAAACCCATCCTACCTTACATAT...GACAAGTCCCCTGCTAGTCTCTCTGAACTCCACTTTTACTTTATATAAATACCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR TCA 90 bp | TGTTGGTATTTATATAAAGTAAAAGTGGAGTTCAGAGAGACTAGCAGGGGACTTAAGTCTCTCTCTTCTTaGAAATCTAGAGTGGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: CWYLYKVKVEFRETSRGLKSLSS*KSRVEH Trigger: ATGTTCCACTCTAGATTTTCAAGAAGAGAGAGACTT...AAGTCCCCTGCTAGTCTCTCTGAACTCCACTTTTACTTTATATAAATACCAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR TCA 90 bp | TCTTGTTGGTATTTATATAAAGTAAAAGTGGAGTTCAGAGAGACTAGCAGGGGAAAGTCTCTCTCTTCTTaGAAATCTAGAGTGGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: SCWYLYKVKVEFRETSRGKSLSS*KSRVEH Trigger: ATGTTCCACTCTAGATTTTCAAGAAGAGAGAGACTT...TCCCCTGCTAGTCTCTCTGAACTCCACTTTTACTTTATATAAATACCAACAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR TCA 90 bp | TTTGTTTGTTTTACCCCAACTAGGAAGGAAAGAGCTGTTACTAAACTGAGAAAGAAGTCTCTCTCTTCTTaGAAATCTAGAGTGGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: FVCFTPTRKERAVTKLRKKSLSS*KSRVEH Trigger: ATGTTCCACTCTAGATTTTCAAGAAGAGAGAGACTT...CTTTCTCAGTTTAGTAACAGCTCTTTCCTTCCTAGTTGGGGTAAAACAAACAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| CDS-3UTR TCA 90 bp | TCTTGTTGGTATTTATATAAAGTAAAAGTGGAGTTCAGAGAGACTAGCAGGGGATTCAAAGGTTCTGTTTaGCTCCTTGGAAGTAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SCWYLYKVKVEFRETSRGFKGSV*LLGSNK Trigger: TTTGTTACTTCCAAGGAGTCAAACAGAACCTTTGAA...TCCCCTGCTAGTCTCTCTGAACTCCACTTTTACTTTATATAAATACCAACAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR TCA 90 bp | TGTTGGTATTTATATAAAGTAAAAGTGGAGTTCAGAGAGACTAGCAGGGGACTTTTCAAAGGTTCTGTTTaGCTCCTTGGAAGTAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: CWYLYKVKVEFRETSRGLFKGSV*LLGSNK Trigger: TTTGTTACTTCCAAGGAGTCAAACAGAACCTTTGAA...AAGTCCCCTGCTAGTCTCTCTGAACTCCACTTTTACTTTATATAAATACCAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR CCA 90 bp | CTTTACTTTGACAAGCGAGATGGGAGGTGTTTAAAGCAGTCTTGTTGGTATTTACTTGAAAATCTAGAGTaGAACATATGTAAGGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LYFDKRDGRCLKQSCWYLLENLE*NICKVG Trigger: TCCTACCTTACATATGTTCCACTCTAGATTTTCAAG...TAAATACCAACAAGACTGCTTTAAACACCTCCCATCTCGCTTGTCAAAGTAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR CCA 90 bp | TACTTTGACAAGCGAGATGGGAGGTGTTTAAAGCAGTCTTGTTGGTATTTATATAATGGACTTACAAGTTaGAAGGGAATTGATTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YFDKRDGRCLKQSCWYLYNGLTS*KGIDSE Trigger: CTCAGAATCAATTCCCTTCCAACTTGTAAGTCCATT...ATATAAATACCAACAAGACTGCTTTAAACACCTCCCATCTCGCTTGTCAAAGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
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| CDS-3UTR CCA 90 bp | TCTTGTTGGTATTTATATAAAGTAAAAGTGGAGTTCAGAGAGACTAGCAGGGGAAATGGACTTACAAGTTaGAAGGGAATTGATTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SCWYLYKVKVEFRETSRGNGLTS*KGIDSE Trigger: CTCAGAATCAATTCCCTTCCAACTTGTAAGTCCATT...TCCCCTGCTAGTCTCTCTGAACTCCACTTTTACTTTATATAAATACCAACAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR GCA 90 bp | AAGCAGTCTTGTTGGTATTTATATAAAGTAAAAGTGGAGTTCAGAGAGACTAGCGAAGTAACAAAAACTTaGTTGCAGTTCTCCACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KQSCWYLYKVKVEFRETSEVTKT*LQFSTN Trigger: GTTTGTGGAGAACTGCAAGCAAGTTTTTGTTACTTC...GCTAGTCTCTCTGAACTCCACTTTTACTTTATATAAATACCAACAAGACTGCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR CCA 90 bp | AAGCAGTCTTGTTGGTATTTATATAAAGTAAAAGTGGAGTTCAGAGAGACTAGCATATGTAAGGTAGGATaGGTTTCTGGCGCTTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KQSCWYLYKVKVEFRETSICKVG*VSGALK Trigger: TTTTAAAGCGCCAGAAACCCATCCTACCTTACATAT...GCTAGTCTCTCTGAACTCCACTTTTACTTTATATAAATACCAACAAGACTGCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
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| CDS GCA 90 bp | ATTGGGCTTCTCCTGGATCCAGGTTTTGGTGGCTTGGCGGAAGGCTaGCCAGTGCACCGCCGTCACTTTGTGGTGGTCCCTGTAGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: IGLLLDPGFGGLAEG*PVHRRHFVVVPVAH Trigger: ATGGGCTACAGGGACCACCACAAAGTGACGGCGGTGCACTGGGCAGCCTTCCGCCAAGCCACCAAAACCTGGATCCAGGAGAAGCCCAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075632.14 |
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| CDS CCA 90 bp | GGAAGTAGAGGAGACCATTGGGCTTCTCCTGGATCCAGGTTTTGGTaGCTTGGCGGAAGGCTGCCCAGTGCACCGCCGTCACTTTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GSRGDHWASPGSRFW*LGGRLPSAPPSLCG Trigger: ACCACAAAGTGACGGCGGTGCACTGGGCAGCCTTCCGCCAAGCCACCAAAACCTGGATCCAGGAGAAGCCCAATGGTCTCCTCTACTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075632.14 |
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| CDS CCA 90 bp | GCTGGAAGTAGAGGAGACCATTGGGCTTCTCCTGGATCCAGGTTTTaGTGGCTTGGCGGAAGGCTGCCCAGTGCACCGCCGTCACTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: AGSRGDHWASPGSRF*WLGGRLPSAPPSLC Trigger: ACAAAGTGACGGCGGTGCACTGGGCAGCCTTCCGCCAAGCCACCAAAACCTGGATCCAGGAGAAGCCCAATGGTCTCCTCTACTTCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075632.14 |
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| CDS GCA 90 bp | ATGGGCTTGCTCTGCCCGAAGCGTTCTTGGTCGGCAGGGGAGAGGTaGTGTCTGAAGATGTTGAACTTGGTGTCTTCGTCCCCGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MGLLCPKRSWSAGER*CLKMLNLVSSSPML Trigger: CAGCATCGGGGACGAAGACACCAAGTTCAACATCTTCAGACAGCACCTCTCCCCTGCCGACCAAGAACGCTTCGGGCAGAGCAAGCCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075632.14 ENSMUST00000219108.2 |
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| CDS GCA 90 bp | TCACGCTGTTCTGGGCCACATTGGGATTGCTCTCTCTCACCGGAGTaGTTACACCCAGCAGCTTGTGCTCCACGGCACTCCTTAGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: SRCSGPHWDCSLSPE*LHPAACAPRHSLGT Trigger: AGTCCCTAAGGAGTGCCGTGGAGCACAAGCTGCTGGGTGTAAGCACTCCGGTGAGAGAGAGCAATCCCAATGTGGCCCAGAACAGCGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075632.14 |
||
| CDS TCA 90 bp | CACACAGCGACTTGCAGGACAGACTGGAGGAGACGCTGCTCAGAATaGATTTACAGTGAGGAGGCAGGGAGCGCGGCAGCCAGGAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: HTATCRTDWRRRCSE*IYSEEAGSAAARRN Trigger: ATTTCTCCTGGCTGCCGCGCTCCCTGCCTCCTCACTGTAAATTCATTCTGAGCAGCGTCTCCTCCAGTCTGTCCTGCAAGTCGCTGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075632.14 ENSMUST00000219108.2 |
||
| CDS TCA 90 bp | TTGCAGGACAGACTGGAGGAGACGCTGCTCAGAATGAATTTACAGTaGGGAGGCAGGGAGCGCGGCAGCCAGGAGAAATCTTTCGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LQDRLEETLLRMNLQ*GGRERGSQEKSFAF Trigger: GAAGGCGAAAGATTTCTCCTGGCTGCCGCGCTCCCTGCCTCCTCACTGTAAATTCATTCTGAGCAGCGTCTCCTCCAGTCTGTCCTGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075632.14 ENSMUST00000219108.2 |
||
| CDS TCA 90 bp | ATCGTGTCCAAAAGCTGGAGCAGTTCATCCTCAGCCAGCCCGCAGTaGGAGATGCAGAGCAAGCACAGCACATCCACTACCCAGCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: IVSKSWSSSSSASPQ*EMQSKHSTSTTQPL Trigger: AAGTGGCTGGGTAGTGGATGTGCTGTGCTTGCTCTGCATCTCTCACTGCGGGCTGGCTGAGGATGAACTGCTCCAGCTTTTGGACACGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075632.14 |
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| CDS TCA 90 bp | AGACCTTCCCAATACCCGCTCATCTTCATGTGCCAGGGCAGCTCCTaGTACACCCTCCAGAAGATGGTTTGCCGCTGGAAGAACCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: RPSQYPLIFMCQGSS*YTLQKMVCRWKNLI Trigger: GATGAGGTTCTTCCAGCGGCAAACCATCTTCTGGAGGGTGTATCAGGAGCTGCCCTGGCACATGAAGATGAGCGGGTATTGGGAAGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075632.14 ENSMUST00000219476.2 |
||
| CDS TCA 90 bp | AGTATGGGATCATCAGCACTCCGGGGTGTTTGCTTTGGAAATTACTaGCCCAGTTGGCAATCAGTGTGGACTTCCCACAGCCGCGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SMGSSALRGVCFGNY*PSWQSVWTSHSRVP Trigger: GGGAACGCGGCTGTGGGAAGTCCACACTGATTGCCAACTGGGTCAGTAATTTCCAAAGCAAACACCCCGGAGTGCTGATGATCCCATACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061458.9 ENSMUST00000075632.14 ENSMUST00000217747.2 ENSMUST00000219108.2 |
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| CDS CCA 90 bp | TTTGGTTTCTTCCTCAAAATGGGCTTGCTCTGCCCGAAGCGTTCTTaGTCGGCAGGGGAGAGGTGCTGTCTGAAGATGTTGAACTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FGFFLKMGLLCPKRS*SAGERCCLKMLNLV Trigger: CACCAAGTTCAACATCTTCAGACAGCACCTCTCCCCTGCCGACCAAGAACGCTTCGGGCAGAGCAAGCCCATTTTGAGGAAGAAACCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075632.14 ENSMUST00000219108.2 |
||
| CDS CCA 90 bp | TCATCTTCATGTGCCAGGGCAGCTCCTGATACACCCTCCAGAAGATaGTTTGCCGCTGGAAGAACCTCATCAAGACCTGGTGGAAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSCARAAPDTPSRR*FAAGRTSSRPGGNV Trigger: CACATTTCCACCAGGTCTTGATGAGGTTCTTCCAGCGGCAAACCATCTTCTGGAGGGTGTATCAGGAGCTGCCCTGGCACATGAAGATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075632.14 |
||
| CDS-3UTR CAA 90 bp | AGGATGAGGGACTGCACCAGCAGGGGGCAGCAGAAACAGAACAACCGAGAAACTTCCGGGGTGTTTGCTTaGGAAATTACTGACCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: RMRDCTSRGQQKQNNRETSGVFA*EITDPV Trigger: AACTGGGTCAGTAATTTCCAAAGCAAACACCCCGGA...AGTTTCTCGGTTGTTCTGTTTCTGCTGCCCCCTGCTGGTGCAGTCCCTCATCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| CDS GCA 90 bp | GATGGTTTGCCGCTGGAAGAACCTCATCAAGACCTGGTGGAAATGTaGCTTCTTGTGATTCACGCTGTTCTGGGCCACATTGGGATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: DGLPLEEPHQDLVEM*LLVIHAVLGHIGIA Trigger: AGCAATCCCAATGTGGCCCAGAACAGCGTGAATCACAAGAAGGCACATTTCCACCAGGTCTTGATGAGGTTCTTCCAGCGGCAAACCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075632.14 |
||
| CDS CCA 90 bp | CTGCCCACAAAGTATGGGATCATCAGCACTCCGGGGTGTTTGCTTTaGAAATTACTGACCCAGTTGGCAATCAGTGTGGACTTCCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: LPTKYGIISTPGCLL*KLLTQLAISVDFPQ Trigger: CTGTGGGAAGTCCACACTGATTGCCAACTGGGTCAGTAATTTCCAAAGCAAACACCCCGGAGTGCTGATGATCCCATACTTTGTGGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061458.9 ENSMUST00000075632.14 ENSMUST00000217747.2 ENSMUST00000219108.2 |
||
| CDS-3UTR CAA 90 bp | CCAGCAGGGGGCAGCAGAAACAGAACAACCGAGAAACTGGGACAAACAAGTCTTCTGACAGGAAGCCCTTaGCCAATGATCTTAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PAGGSRNRTTEKLGQTSLLTGSP*PMILAL Trigger: CAAGGCTAAGATCATTGGCAAAGGGCTTCCTGTCAG...AAGACTTGTTTGTCCCAGTTTCTCGGTTGTTCTGTTTCTGCTGCCCCCTGCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| CDS-3UTR CAA 90 bp | AGGATGAGGGACTGCACCAGCAGGGGGCAGCAGAAACAGAACAACCGAGAAACTAAATTACTGACCCAGTaGGCAATCAGTGTGGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: RMRDCTSRGQQKQNNRETKLLTQ*AISVDF Trigger: GAAGTCCACACTGATTGCCAACTGGGTCAGTAATTT...AGTTTCTCGGTTGTTCTGTTTCTGCTGCCCCCTGCTGGTGCAGTCCCTCATCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| CDS TCA 90 bp | GCCTTTATCAGCAGCAGTAATCTCGGACAGGCTGCATTCCAGCACTaGGAGTGTGGTTCGCTTCTTGAGTTTCTGGAATTGTTCCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AFISSSNLGQAAFQH*ECGSLLEFLELFPF Trigger: GAAGGGGAACAATTCCAGAAACTCAAGAAGCGAACCACACTCTCAGTGCTGGAATGCAGCCTGTCCGAGATTACTGCTGCTGATAAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075632.14 |
||
| CDS-3UTR CAA 90 bp | GAGGAAATCAGGCATCAAGGTGCCAGGAGAGCCAAGGTATATAGCACACCCTTTTACTGTCGGAACTGGTaGCTGGTGAAGGACTTATGG | + |
|
Preference number: 5 (lower is better) Translates to: EEIRHQGARRAKVYSTPFYCRNW*LVKDLW Trigger: CCATAAGTCCTTCACCAGCAACCAGTTCCGACAGTA...AAAGGGTGTGCTATATACCTTGGCTCTCCTGGCACCTTGATGCCTGATTTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| CDS-3UTR CAA 90 bp | GATGAGGGACTGCACCAGCAGGGGGCAGCAGAAACAGAACAACCGAGAAACTGGGGAAGTAACAAAAACTaGCTTGCAGTTCTCCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: DEGLHQQGAAETEQPRNWGSNKN*LAVLHK Trigger: TTTGTGGAGAACTGCAAGCAAGTTTTTGTTACTTCC...CCAGTTTCTCGGTTGTTCTGTTTCTGCTGCCCCCTGCTGGTGCAGTCCCTCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| CDS CCA 90 bp | GAGTGGAACATATGTAAGGTAGGATGGGTTTCTGGCGCTTTAAAATaGGTTGACCGTTGTATCTTTGTCCGGTCTCACTTGCCTCGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: EWNICKVGWVSGALK*VDRCIFVRSHLPRR Trigger: GCGACGAGGCAAGTGAGACCGGACAAAGATACAACGGTCAACCCATTTTAAAGCGCCAGAAACCCATCCTACCTTACATATGTTCCACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061458.9 ENSMUST00000075632.14 ENSMUST00000217747.2 ENSMUST00000219108.2 |
||
| CDS CCA 90 bp | CACAGACATGATGTCACAGCTCTCACACGTACTGCCCACAAAGTATaGGATCATCAGCACTCCGGGGTGTTTGCTTTGGAAATTACTGAC | + |
|
Preference number: 5 (lower is better) Translates to: HRHDVTALTRTAHKV*DHQHSGVFALEITD Trigger: GTCAGTAATTTCCAAAGCAAACACCCCGGAGTGCTGATGATCCCATACTTTGTGGGCAGTACGTGTGAGAGCTGTGACATCATGTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061458.9 ENSMUST00000075632.14 ENSMUST00000217747.2 ENSMUST00000219108.2 |
||
| CDS CCA 90 bp | AGGCTGCATTCCAGCACTGAGAGTGTGGTTCGCTTCTTGAGTTTCTaGAATTGTTCCCCTTCTATCTTGGCAACAGAGAGCAGAAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RLHSSTESVVRFLSF*NCSPSILATESRKA Trigger: GGCTTTTCTGCTCTCTGTTGCCAAGATAGAAGGGGAACAATTCCAGAAACTCAAGAAGCGAACCACACTCTCAGTGCTGGAATGCAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075632.14 |
||
| CDS-3UTR CAA 90 bp | GAGGAAATCAGGCATCAAGGTGCCAGGAGAGCCAAGGTATATAGCACACCCTTTCGAGGGAAGATGCTTTaGGCCAAAAAGTCTCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: EEIRHQGARRAKVYSTPFRGKML*AKKSLS Trigger: AGAGAGAGACTTTTTGGCCAAAAGCATCTTCCCTCG...AAAGGGTGTGCTATATACCTTGGCTCTCCTGGCACCTTGATGCCTGATTTCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| CDS-3UTR CAA 90 bp | GAGGAAATCAGGCATCAAGGTGCCAGGAGAGCCAAGGTATATAGCACACCCTTTTCAGAGGGCTCAGGTTaGGTTTCTTCCTCAAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: EEIRHQGARRAKVYSTPFSEGSG*VSSSKW Trigger: CCATTTTGAGGAAGAAACCAAACCTGAGCCCTCTGA...AAAGGGTGTGCTATATACCTTGGCTCTCCTGGCACCTTGATGCCTGATTTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| CDS-3UTR CAA 90 bp | TTTGTTTGTTTTACCCCAACTAGGAAGGAAAGAGCTGTTACTAAACTGAGAAAGCGGGCACACAGCGACTaGCAGGACAGACTGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: FVCFTPTRKERAVTKLRKRAHSD*QDRLEE Trigger: CTCCTCCAGTCTGTCCTGCAAGTCGCTGTGTGCCCG...CTTTCTCAGTTTAGTAACAGCTCTTTCCTTCCTAGTTGGGGTAAAACAAACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| CDS-3UTR CAA 90 bp | ACCCTTTTAGTCCCAGAACTCGGGAGGCAGAAGCAGATGGAGCTGTGTGAGTTTGTAACAAAAACTTGCTaGCAGTTCTCCACAAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: TLLVPELGRQKQMELCEFVTKTC*QFSTNS Trigger: AGAGTTTGTGGAGAACTGCAAGCAAGTTTTTGTTAC...AAACTCACACAGCTCCATCTGCTTCTGCCTCCCGAGTTCTGGGACTAAAAGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| CDS-3UTR CAA 90 bp | ACCCTTTTAGTCCCAGAACTCGGGAGGCAGAAGCAGATGGAGCTGTGTGAGTTTGTTCTGTTTGACTCCTaGGAAGTAACAAAAACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: TLLVPELGRQKQMELCEFVLFDS*EVTKTC Trigger: GCAAGTTTTTGTTACTTCCAAGGAGTCAAACAGAAC...AAACTCACACAGCTCCATCTGCTTCTGCCTCCCGAGTTCTGGGACTAAAAGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| CDS TCA 90 bp | TCCCGTCTAGTACCAGGATGCATGGCTTTAAGCTTATGGCGGCTATaGACACTTCTACGAGAAGTGAAAAGACCAAGACATTTGAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SRLVPGCMALSLWRL*TLLREVKRPRHLSP Trigger: AGGACTCAAATGTCTTGGTCTTTTCACTTCTCGTAGAAGTGTTCATAGCCGCCATAAGCTTAAAGCCATGCATCCTGGTACTAGACGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075632.14 ENSMUST00000219108.2 |
||
| CDS CCA 90 bp | CTCGAAACTGTGTTTGTAGTCTATATTTCCCATGATCGTAGTGAATaGATAGAGCTTTTCCACAACAGCCGACCAGTCCTTCCAAACCAT | + |
|
Preference number: 5 (lower is better) Translates to: LETVFVVYISHDRSE*IELFHNSRPVLPNH Trigger: ATGGTTTGGAAGGACTGGTCGGCTGTTGTGGAAAAGCTCTATCCATTCACTACGATCATGGGAAATATAGACTACAAACACAGTTTCGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061458.9 ENSMUST00000075632.14 ENSMUST00000217747.2 ENSMUST00000219108.2 |
||
| CDS-3UTR CAA 90 bp | TGTTGGTATTTATATAAAGTAAAAGTGGAGTTCAGAGAGACTAGCAGGGGACTTTACTGTCGGAACTGGTaGCTGGTGAAGGACTTATGG | + |
|
Preference number: 5 (lower is better) Translates to: CWYLYKVKVEFRETSRGLYCRNW*LVKDLW Trigger: CCATAAGTCCTTCACCAGCAACCAGTTCCGACAGTA...AAGTCCCCTGCTAGTCTCTCTGAACTCCACTTTTACTTTATATAAATACCAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR CAA 90 bp | TTTGTTTGTTTTACCCCAACTAGGAAGGAAAGAGCTGTTACTAAACTGAGAAAGGGAGAGTTTCAGGTGTaGAGACTGGAGACAGGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: FVCFTPTRKERAVTKLRKGEFQV*RLETGV Trigger: TACTCCTGTCTCCAGTCTCAACACCTGAAACTCTCC...CTTTCTCAGTTTAGTAACAGCTCTTTCCTTCCTAGTTGGGGTAAAACAAACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219108.2 |
||
| CDS-3UTR CAA 90 bp | TGTTGGTATTTATATAAAGTAAAAGTGGAGTTCAGAGAGACTAGCAGGGGACTTCTGACAGGAAGCCCTTaGCCAATGATCTTAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CWYLYKVKVEFRETSRGLLTGSP*PMILAL Trigger: CAAGGCTAAGATCATTGGCAAAGGGCTTCCTGTCAG...AAGTCCCCTGCTAGTCTCTCTGAACTCCACTTTTACTTTATATAAATACCAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS TCA 90 bp | CTCTTCCTCCTCCTCTTCCTCATTAAAAGTTCGCAGCAGCGAATTTaGTGTCCGGAAGTAGAAAAATTGAAATTGAGATTTCTTCCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LFLLLFLIKSSQQRI*CPEVEKLKLRFLPE Trigger: TTCCGGAAGAAATCTCAATTTCAATTTTTCTACTTCCGGACATCAAATTCGCTGCTGCGAACTTTTAATGAGGAAGAGGAGGAGGAAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061458.9 ENSMUST00000075632.14 ENSMUST00000217747.2 ENSMUST00000219108.2 |
||
| CDS CCA 90 bp | CTCTCTCTTCTTGAAAATCTAGAGTGGAACATATGTAAGGTAGGATaGGTTTCTGGCGCTTTAAAATGGGTTGACCGTTGTATCTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSLLENLEWNICKVG*VSGALKWVDRCIFV Trigger: GACAAAGATACAACGGTCAACCCATTTTAAAGCGCCAGAAACCCATCCTACCTTACATATGTTCCACTCTAGATTTTCAAGAAGAGAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061458.9 ENSMUST00000075632.14 ENSMUST00000217747.2 ENSMUST00000219108.2 |
||
| CDS CCA 90 bp | AAGGGTAACCATTTTTGGCAGCAATGTATAGATTCTGTTCTCCCTTaGATAAACTTTCGAAGTCCTTCACTTGGGATAACAGGAAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KGNHFWQQCIDSVLP*INFRSPSLGITGKV Trigger: CACCTTTCCTGTTATCCCAAGTGAAGGACTTCGAAAGTTTATCCAAGGGAGAACAGAATCTATACATTGCTGCCAAAAATGGTTACCCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000061458.9 ENSMUST00000075632.14 ENSMUST00000217747.2 ENSMUST00000219108.2 |
||
| CDS-3UTR CAA 90 bp | TACTTTGACAAGCGAGATGGGAGGTGTTTAAAGCAGTCTTGTTGGTATTTATATCGAGGGAAGATGCTTTaGGCCAAAAAGTCTCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: YFDKRDGRCLKQSCWYLYRGKML*AKKSLS Trigger: AGAGAGAGACTTTTTGGCCAAAAGCATCTTCCCTCG...ATATAAATACCAACAAGACTGCTTTAAACACCTCCCATCTCGCTTGTCAAAGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR CAA 90 bp | TGTTGGTATTTATATAAAGTAAAAGTGGAGTTCAGAGAGACTAGCAGGGGACTTCGAGGGAAGATGCTTTaGGCCAAAAAGTCTCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CWYLYKVKVEFRETSRGLRGKML*AKKSLS Trigger: AGAGAGAGACTTTTTGGCCAAAAGCATCTTCCCTCG...AAGTCCCCTGCTAGTCTCTCTGAACTCCACTTTTACTTTATATAAATACCAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR CAA 90 bp | AAGCAGTCTTGTTGGTATTTATATAAAGTAAAAGTGGAGTTCAGAGAGACTAGCGGAGAGTTTCAGGTGTaGAGACTGGAGACAGGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: KQSCWYLYKVKVEFRETSGEFQV*RLETGV Trigger: TACTCCTGTCTCCAGTCTCAACACCTGAAACTCTCC...GCTAGTCTCTCTGAACTCCACTTTTACTTTATATAAATACCAACAAGACTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR CAA 90 bp | AAGCAGTCTTGTTGGTATTTATATAAAGTAAAAGTGGAGTTCAGAGAGACTAGCCTGACAGGAAGCCCTTaGCCAATGATCTTAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KQSCWYLYKVKVEFRETSLTGSP*PMILAL Trigger: CAAGGCTAAGATCATTGGCAAAGGGCTTCCTGTCAG...GCTAGTCTCTCTGAACTCCACTTTTACTTTATATAAATACCAACAAGACTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR CAA 90 bp | GACAAGCGAGATGGGAGGTGTTTAAAGCAGTCTTGTTGGTATTTATATAAAGTATCCGGGGTGTTTGCTTaGGAAATTACTGACCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: DKRDGRCLKQSCWYLYKVSGVFA*EITDPV Trigger: AACTGGGTCAGTAATTTCCAAAGCAAACACCCCGGA...TACTTTATATAAATACCAACAAGACTGCTTTAAACACCTCCCATCTCGCTTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR CAA 90 bp | TGTTGGTATTTATATAAAGTAAAAGTGGAGTTCAGAGAGACTAGCAGGGGACTTAAATTACTGACCCAGTaGGCAATCAGTGTGGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: CWYLYKVKVEFRETSRGLKLLTQ*AISVDF Trigger: GAAGTCCACACTGATTGCCAACTGGGTCAGTAATTT...AAGTCCCCTGCTAGTCTCTCTGAACTCCACTTTTACTTTATATAAATACCAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR CAA 90 bp | TCTTGTTGGTATTTATATAAAGTAAAAGTGGAGTTCAGAGAGACTAGCAGGGGAAAATTACTGACCCAGTaGGCAATCAGTGTGGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: SCWYLYKVKVEFRETSRGKLLTQ*AISVDF Trigger: GAAGTCCACACTGATTGCCAACTGGGTCAGTAATTT...TCCCCTGCTAGTCTCTCTGAACTCCACTTTTACTTTATATAAATACCAACAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR CAA 90 bp | TTTGACAAGCGAGATGGGAGGTGTTTAAAGCAGTCTTGTTGGTATTTATATAAATCCGGGGTGTTTGCTTaGGAAATTACTGACCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: FDKRDGRCLKQSCWYLYKSGVFA*EITDPV Trigger: AACTGGGTCAGTAATTTCCAAAGCAAACACCCCGGA...TTTATATAAATACCAACAAGACTGCTTTAAACACCTCCCATCTCGCTTGTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR CAA 90 bp | TGGTATTTATATAAAGTAAAAGTGGAGTTCAGAGAGACTAGCAGGGGACTTGTCGGAAGTAACAAAAACTaGCTTGCAGTTCTCCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: WYLYKVKVEFRETSRGLVGSNKN*LAVLHK Trigger: TTTGTGGAGAACTGCAAGCAAGTTTTTGTTACTTCC...GACAAGTCCCCTGCTAGTCTCTCTGAACTCCACTTTTACTTTATATAAATACCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR CAA 90 bp | TACTTTGACAAGCGAGATGGGAGGTGTTTAAAGCAGTCTTGTTGGTATTTATATGTAACAAAAACTTGCTaGCAGTTCTCCACAAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: YFDKRDGRCLKQSCWYLYVTKTC*QFSTNS Trigger: AGAGTTTGTGGAGAACTGCAAGCAAGTTTTTGTTAC...ATATAAATACCAACAAGACTGCTTTAAACACCTCCCATCTCGCTTGTCAAAGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR CAA 90 bp | TGTTGGTATTTATATAAAGTAAAAGTGGAGTTCAGAGAGACTAGCAGGGGACTTGGAAGTAACAAAAACTaGCTTGCAGTTCTCCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: CWYLYKVKVEFRETSRGLGSNKN*LAVLHK Trigger: TTTGTGGAGAACTGCAAGCAAGTTTTTGTTACTTCC...AAGTCCCCTGCTAGTCTCTCTGAACTCCACTTTTACTTTATATAAATACCAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR CAA 90 bp | GACAAGCGAGATGGGAGGTGTTTAAAGCAGTCTTGTTGGTATTTATATAAAGTAGTTCTGTTTGACTCCTaGGAAGTAACAAAAACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: DKRDGRCLKQSCWYLYKVVLFDS*EVTKTC Trigger: GCAAGTTTTTGTTACTTCCAAGGAGTCAAACAGAAC...TACTTTATATAAATACCAACAAGACTGCTTTAAACACCTCCCATCTCGCTTGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR CAA 90 bp | AAGCAGTCTTGTTGGTATTTATATAAAGTAAAAGTGGAGTTCAGAGAGACTAGCGTAACAAAAACTTGCTaGCAGTTCTCCACAAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: KQSCWYLYKVKVEFRETSVTKTC*QFSTNS Trigger: AGAGTTTGTGGAGAACTGCAAGCAAGTTTTTGTTAC...GCTAGTCTCTCTGAACTCCACTTTTACTTTATATAAATACCAACAAGACTGCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS-3UTR CAA 90 bp | AAGCAGTCTTGTTGGTATTTATATAAAGTAAAAGTGGAGTTCAGAGAGACTAGCGTTCTGTTTGACTCCTaGGAAGTAACAAAAACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: KQSCWYLYKVKVEFRETSVLFDS*EVTKTC Trigger: GCAAGTTTTTGTTACTTCCAAGGAGTCAAACAGAAC...GCTAGTCTCTCTGAACTCCACTTTTACTTTATATAAATACCAACAAGACTGCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061458.9 ENSMUST00000217747.2 |
||
| CDS GCA 72 bp | CTCCTGGATCCAGGTTTTGGTGGCTTGGCGGAAGGCTaGCCAGTGCACCGCCGTCACTTTGTGGTGGTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LLDPGFGGLAEG*PVHRRHFVVVP Trigger: AGGGACCACCACAAAGTGACGGCGGTGCACTGGGCAGCCTTCCGCCAAGCCACCAAAACCTGGATCCAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075632.14 |
||
| CDS CCA 72 bp | GGAGACCATTGGGCTTCTCCTGGATCCAGGTTTTGGTaGCTTGGCGGAAGGCTGCCCAGTGCACCGCCGTCA | + |
|
Preference number: 6 (lower is better) Translates to: GDHWASPGSRFW*LGGRLPSAPPS Trigger: TGACGGCGGTGCACTGGGCAGCCTTCCGCCAAGCCACCAAAACCTGGATCCAGGAGAAGCCCAATGGTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075632.14 |
||
| CDS CAA 90 bp | GTAGAGGAGACCATTGGGCTTCTCCTGGATCCAGGTTTTGGTGGCTaGGCGGAAGGCTGCCCAGTGCACCGCCGTCACTTTGTGGTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: VEETIGLLLDPGFGG*AEGCPVHRRHFVVV Trigger: GACCACCACAAAGTGACGGCGGTGCACTGGGCAGCCTTCCGCCAAGCCACCAAAACCTGGATCCAGGAGAAGCCCAATGGTCTCCTCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075632.14 |
||
| CDS GCA 72 bp | GGAGCAGTTCATCCTCAGCCAGCCCGCAGTGAGAGATaGAGAGCAAGCACAGCACATCCACTACCCAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GAVHPQPARSER*RASTAHPLPSH Trigger: GTGGCTGGGTAGTGGATGTGCTGTGCTTGCTCTGCATCTCTCACTGCGGGCTGGCTGAGGATGAACTGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075632.14 |
||
| CDS GCA 72 bp | CTCTCTCTCACCGGAGTGCTTACACCCAGCAGCTTGTaGTCCACGGCACTCCTTAGGGACTGGTGCTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LSLTGVLTPSSL*STALLRDWCWK Trigger: CTTCCAGCACCAGTCCCTAAGGAGTGCCGTGGAGCACAAGCTGCTGGGTGTAAGCACTCCGGTGAGAGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075632.14 |
||
| CDS CAA 72 bp | ACCATTGGGCTTCTCCTGGATCCAGGTTTTGGTGGCTaGGCGGAAGGCTGCCCAGTGCACCGCCGTCACTTT | + |
|
Preference number: 6 (lower is better) Translates to: TIGLLLDPGFGG*AEGCPVHRRHF Trigger: AAAGTGACGGCGGTGCACTGGGCAGCCTTCCGCCAAGCCACCAAAACCTGGATCCAGGAGAAGCCCAATGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075632.14 |
||
| CDS CAA 72 bp | TTGCTCTCTCTCACCGGAGTGCTTACACCCAGCAGCTaGTGCTCCACGGCACTCCTTAGGGACTGGTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LLSLTGVLTPSS*CSTALLRDWCW Trigger: CCAGCACCAGTCCCTAAGGAGTGCCGTGGAGCACAAGCTGCTGGGTGTAAGCACTCCGGTGAGAGAGAGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075632.14 |
||
| CDS TCA 72 bp | ACTTGCAGGACAGACTGGAGGAGACGCTGCTCAGAATaGATTTACAGTGAGGAGGCAGGGAGCGCGGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: TCRTDWRRRCSE*IYSEEAGSAAA Trigger: GGCTGCCGCGCTCCCTGCCTCCTCACTGTAAATTCATTCTGAGCAGCGTCTCCTCCAGTCTGTCCTGCAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075632.14 ENSMUST00000219108.2 |
||
| CDS GCA 72 bp | CTCTGCCCGAAGCGTTCTTGGTCGGCAGGGGAGAGGTaGTGTCTGAAGATGTTGAACTTGGTGTCTTCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LCPKRSWSAGER*CLKMLNLVSSS Trigger: GGACGAAGACACCAAGTTCAACATCTTCAGACAGCACCTCTCCCCTGCCGACCAAGAACGCTTCGGGCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075632.14 ENSMUST00000219108.2 |
||
| CDS GCA 72 bp | CTCAGGTTTGGTTTCTTCCTCAAAATGGGCTTGCTCTaGCCGAAGCGTTCTTGGTCGGCAGGGGAGAGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LRFGFFLKMGLL*PKRSWSAGERC Trigger: GCACCTCTCCCCTGCCGACCAAGAACGCTTCGGGCAGAGCAAGCCCATTTTGAGGAAGAAACCAAACCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075632.14 ENSMUST00000219108.2 |
||
| CDS GCA 72 bp | TCAACCCAGCGCTTCAGAATCAACTCCCAGAGCTCCTaGACAGAGGCAACCTCCAAGTACTCCCGGAGACAC | + |
|
Preference number: 6 (lower is better) Translates to: STQRFRINSQSS*TEATSKYSRRH Trigger: GTGTCTCCGGGAGTACTTGGAGGTTGCCTCTGTGCAGGAGCTCTGGGAGTTGATTCTGAAGCGCTGGGTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075632.14 ENSMUST00000219108.2 |
||
| CDS CAA 72 bp | AGAGGGCTCAGGTTTGGTTTCTTCCTCAAAATGGGCTaGCTCTGCCCGAAGCGTTCTTGGTCGGCAGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RGLRFGFFLKMG*LCPKRSWSAGE Trigger: CTCCCCTGCCGACCAAGAACGCTTCGGGCAGAGCAAGCCCATTTTGAGGAAGAAACCAAACCTGAGCCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075632.14 ENSMUST00000219108.2 |
||
| CDS CAA 90 bp | CCGAAGCGTTCTTGGTCGGCAGGGGAGAGGTGCTGTCTGAAGATGTaGAACTTGGTGTCTTCGTCCCCGATGCTGTTGAGTTCCACGATC | + |
|
Preference number: 6 (lower is better) Translates to: PKRSWSAGERCCLKM*NLVSSSPMLLSSTI Trigger: GATCGTGGAACTCAACAGCATCGGGGACGAAGACACCAAGTTCAACATCTTCAGACAGCACCTCTCCCCTGCCGACCAAGAACGCTTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075632.14 ENSMUST00000219108.2 |
||
| CDS TCA 72 bp | AAAAGCTGGAGCAGTTCATCCTCAGCCAGCCCGCAGTaGGAGATGCAGAGCAAGCACAGCACATCCACTACC | + |
|
Preference number: 6 (lower is better) Translates to: KSWSSSSSASPQ*EMQSKHSTSTT Trigger: GGTAGTGGATGTGCTGTGCTTGCTCTGCATCTCTCACTGCGGGCTGGCTGAGGATGAACTGCTCCAGCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075632.14 |
||
| CDS TCA 72 bp | CAATACCCGCTCATCTTCATGTGCCAGGGCAGCTCCTaGTACACCCTCCAGAAGATGGTTTGCCGCTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QYPLIFMCQGSS*YTLQKMVCRWK Trigger: CTTCCAGCGGCAAACCATCTTCTGGAGGGTGTATCAGGAGCTGCCCTGGCACATGAAGATGAGCGGGTATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075632.14 ENSMUST00000219476.2 |
||
| CDS CCA 72 bp | TTCCTCAAAATGGGCTTGCTCTGCCCGAAGCGTTCTTaGTCGGCAGGGGAGAGGTGCTGTCTGAAGATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: FLKMGLLCPKRS*SAGERCCLKML Trigger: CAACATCTTCAGACAGCACCTCTCCCCTGCCGACCAAGAACGCTTCGGGCAGAGCAAGCCCATTTTGAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075632.14 ENSMUST00000219108.2 |
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| CDS CCA 72 bp | TGTGCCAGGGCAGCTCCTGATACACCCTCCAGAAGATaGTTTGCCGCTGGAAGAACCTCATCAAGACCTGGT | + |
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Preference number: 6 (lower is better) Translates to: CARAAPDTPSRR*FAAGRTSSRPG Trigger: ACCAGGTCTTGATGAGGTTCTTCCAGCGGCAAACCATCTTCTGGAGGGTGTATCAGGAGCTGCCCTGGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075632.14 |
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| CDS CAA 72 bp | TCGGCAGGGGAGAGGTGCTGTCTGAAGATGTTGAACTaGGTGTCTTCGTCCCCGATGCTGTTGAGTTCCACG | + |
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Preference number: 6 (lower is better) Translates to: SAGERCCLKMLN*VSSSPMLLSST Trigger: CGTGGAACTCAACAGCATCGGGGACGAAGACACCAAGTTCAACATCTTCAGACAGCACCTCTCCCCTGCCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075632.14 ENSMUST00000219108.2 |
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| CDS CAA 72 bp | CTTCCTCAAAATGGGCTTGCTCTGCCCGAAGCGTTCTaGGTCGGCAGGGGAGAGGTGCTGTCTGAAGATGTT | + |
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Preference number: 6 (lower is better) Translates to: LPQNGLALPEAF*VGRGEVLSEDV Trigger: AACATCTTCAGACAGCACCTCTCCCCTGCCGACCAAGAACGCTTCGGGCAGAGCAAGCCCATTTTGAGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075632.14 ENSMUST00000219108.2 |
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| CDS CAA 72 bp | CCAGGGCAGCTCCTGATACACCCTCCAGAAGATGGTTaGCCGCTGGAAGAACCTCATCAAGACCTGGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: PGQLLIHPPEDG*PLEEPHQDLVE Trigger: TTCCACCAGGTCTTGATGAGGTTCTTCCAGCGGCAAACCATCTTCTGGAGGGTGTATCAGGAGCTGCCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075632.14 |
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| CDS CAA 90 bp | TGCTGTCTGAAGATGTTGAACTTGGTGTCTTCGTCCCCGATGCTGTaGAGTTCCACGATCTTCACGTCAGGGCGGGCACACAGCGACTTG | + |
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Preference number: 6 (lower is better) Translates to: CCLKMLNLVSSSPML*SSTIFTSGRAHSDL Trigger: CAAGTCGCTGTGTGCCCGCCCTGACGTGAAGATCGTGGAACTCAACAGCATCGGGGACGAAGACACCAAGTTCAACATCTTCAGACAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075632.14 ENSMUST00000219108.2 |
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| CDS CAA 90 bp | CGTTCTTGGTCGGCAGGGGAGAGGTGCTGTCTGAAGATGTTGAACTaGGTGTCTTCGTCCCCGATGCTGTTGAGTTCCACGATCTTCACG | + |
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Preference number: 6 (lower is better) Translates to: RSWSAGERCCLKMLN*VSSSPMLLSSTIFT Trigger: CGTGAAGATCGTGGAACTCAACAGCATCGGGGACGAAGACACCAAGTTCAACATCTTCAGACAGCACCTCTCCCCTGCCGACCAAGAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075632.14 ENSMUST00000219108.2 |
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| CDS TCA 72 bp | GCGCGGCAGCCAGGAGAAATCTTTCGCCTTCTGACCTaGAATCCCATAGATACCGATCAGCTCTTCGATCCC | + |
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Preference number: 6 (lower is better) Translates to: ARQPGEIFRLLT*NPIDTDQLFDP Trigger: GGGATCGAAGAGCTGATCGGTATCTATGGGATTTCAGGTCAGAAGGCGAAAGATTTCTCCTGGCTGCCGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075632.14 ENSMUST00000219108.2 |
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| CDS TCA 72 bp | TGCGGTAGATTTTGCACTCCTGCAGCTCGCTGGCGATaGTTGCGAGCTTCAGAGGGCTCAGGTTTGGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: CGRFCTPAARWR*LRASEGSGLVS Trigger: AGAAACCAAACCTGAGCCCTCTGAAGCTCGCAATCATCGCCAGCGAGCTGCAGGAGTGCAAAATCTACCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075632.14 ENSMUST00000219108.2 |
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| CDS CCA 72 bp | GCTGGCGATGATTGCGAGCTTCAGAGGGCTCAGGTTTaGTTTCTTCCTCAAAATGGGCTTGCTCTGCCCGAA | + |
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Preference number: 6 (lower is better) Translates to: AGDDCELQRAQV*FLPQNGLALPE Trigger: TTCGGGCAGAGCAAGCCCATTTTGAGGAAGAAACCAAACCTGAGCCCTCTGAAGCTCGCAATCATCGCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075632.14 ENSMUST00000219108.2 |
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| CDS CAA 72 bp | AAGATGTTGAACTTGGTGTCTTCGTCCCCGATGCTGTaGAGTTCCACGATCTTCACGTCAGGGCGGGCACAC | + |
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Preference number: 6 (lower is better) Translates to: KMLNLVSSSPML*SSTIFTSGRAH Trigger: GTGTGCCCGCCCTGACGTGAAGATCGTGGAACTCAACAGCATCGGGGACGAAGACACCAAGTTCAACATCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075632.14 ENSMUST00000219108.2 |
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| CDS CAA 72 bp | TCTTGGTCGGCAGGGGAGAGGTGCTGTCTGAAGATGTaGAACTTGGTGTCTTCGTCCCCGATGCTGTTGAGT | + |
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Preference number: 6 (lower is better) Translates to: SWSAGERCCLKM*NLVSSSPMLLS Trigger: ACTCAACAGCATCGGGGACGAAGACACCAAGTTCAACATCTTCAGACAGCACCTCTCCCCTGCCGACCAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075632.14 ENSMUST00000219108.2 |
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| CDS CAA 72 bp | TGCAGAGCAAGCACAGCACATCCACTACCCAGCCACTaGGCCCTGGAATCACGGTGTCTAGAGTTGTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: CRASTAHPLPSH*ALESRCLELCL Trigger: AAGACACAACTCTAGACACCGTGATTCCAGGGCCAAGTGGCTGGGTAGTGGATGTGCTGTGCTTGCTCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075632.14 |
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| CDS CAA 90 bp | ATCATCAGCACTCCGGGGTGTTTGCTTTGGAAATTACTGACCCAGTaGGCAATCAGTGTGGACTTCCCACAGCCGCGTTCCCCAGACAAG | + |
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Preference number: 6 (lower is better) Translates to: IISTPGCLLWKLLTQ*AISVDFPQPRSPDK Trigger: CTTGTCTGGGGAACGCGGCTGTGGGAAGTCCACACTGATTGCCAACTGGGTCAGTAATTTCCAAAGCAAACACCCCGGAGTGCTGATGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061458.9 ENSMUST00000075632.14 ENSMUST00000217747.2 ENSMUST00000219108.2 |
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| CDS CAA 90 bp | CTTCATGTGCCAGGGCAGCTCCTGATACACCCTCCAGAAGATGGTTaGCCGCTGGAAGAACCTCATCAAGACCTGGTGGAAATGTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: LHVPGQLLIHPPEDG*PLEEPHQDLVEMCL Trigger: AAGGCACATTTCCACCAGGTCTTGATGAGGTTCTTCCAGCGGCAAACCATCTTCTGGAGGGTGTATCAGGAGCTGCCCTGGCACATGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075632.14 |
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| CDS TCA 72 bp | ACTGGAGACAGGAGTACTGTCGGAACTGGTTGCTGGTaGAGGACTTATGGGCCTTCACAGCTGACCATCTCA | + |
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Preference number: 6 (lower is better) Translates to: TGDRSTVGTGCW*RTYGPSQLTIS Trigger: TGAGATGGTCAGCTGTGAAGGCCCATAAGTCCTTCACCAGCAACCAGTTCCGACAGTACTCCTGTCTCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061458.9 ENSMUST00000075632.14 ENSMUST00000217747.2 ENSMUST00000219108.2 |
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| CDS CAA 90 bp | GTTTGGTTTCTTCCTCAAAATGGGCTTGCTCTGCCCGAAGCGTTCTaGGTCGGCAGGGGAGAGGTGCTGTCTGAAGATGTTGAACTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: VWFLPQNGLALPEAF*VGRGEVLSEDVELG Trigger: ACCAAGTTCAACATCTTCAGACAGCACCTCTCCCCTGCCGACCAAGAACGCTTCGGGCAGAGCAAGCCCATTTTGAGGAAGAAACCAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075632.14 ENSMUST00000219108.2 |
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| CDS TCA 72 bp | TCATCAGCACTCCGGGGTGTTTGCTTTGGAAATTACTaGCCCAGTTGGCAATCAGTGTGGACTTCCCACAGC | + |
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Preference number: 6 (lower is better) Translates to: SSALRGVCFGNY*PSWQSVWTSHS Trigger: GCTGTGGGAAGTCCACACTGATTGCCAACTGGGTCAGTAATTTCCAAAGCAAACACCCCGGAGTGCTGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061458.9 ENSMUST00000075632.14 ENSMUST00000217747.2 ENSMUST00000219108.2 |
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| CDS CCA 72 bp | GATGTCACAGCTCTCACACGTACTGCCCACAAAGTATaGGATCATCAGCACTCCGGGGTGTTTGCTTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: DVTALTRTAHKV*DHQHSGVFALE Trigger: TTCCAAAGCAAACACCCCGGAGTGCTGATGATCCCATACTTTGTGGGCAGTACGTGTGAGAGCTGTGACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061458.9 ENSMUST00000075632.14 ENSMUST00000217747.2 ENSMUST00000219108.2 |
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| CDS CAA 72 bp | GCATCTGTTCACGTAGTCCAGGGAGAGTTTCAGGTGTaGAGACTGGAGACAGGAGTACTGTCGGAACTGGTT | + |
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Preference number: 6 (lower is better) Translates to: ASVHVVQGEFQV*RLETGVLSELV Trigger: AACCAGTTCCGACAGTACTCCTGTCTCCAGTCTCAACACCTGAAACTCTCCCTGGACTACGTGAACAGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061458.9 ENSMUST00000075632.14 ENSMUST00000217747.2 ENSMUST00000219108.2 |
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| CDS CAA 90 bp | ACTGCCCACAAAGTATGGGATCATCAGCACTCCGGGGTGTTTGCTTaGGAAATTACTGACCCAGTTGGCAATCAGTGTGGACTTCCCACA | + |
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Preference number: 6 (lower is better) Translates to: TAHKVWDHQHSGVFA*EITDPVGNQCGLPT Trigger: TGTGGGAAGTCCACACTGATTGCCAACTGGGTCAGTAATTTCCAAAGCAAACACCCCGGAGTGCTGATGATCCCATACTTTGTGGGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061458.9 ENSMUST00000075632.14 ENSMUST00000217747.2 ENSMUST00000219108.2 |
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| CDS CAA 90 bp | CACGTACTGCCCACAAAGTATGGGATCATCAGCACTCCGGGGTGTTaGCTTTGGAAATTACTGACCCAGTTGGCAATCAGTGTGGACTTC | + |
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Preference number: 6 (lower is better) Translates to: HVLPTKYGIISTPGC*LWKLLTQLAISVDF Trigger: GAAGTCCACACTGATTGCCAACTGGGTCAGTAATTTCCAAAGCAAACACCCCGGAGTGCTGATGATCCCATACTTTGTGGGCAGTACGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061458.9 ENSMUST00000075632.14 ENSMUST00000217747.2 ENSMUST00000219108.2 |
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| CDS CCA 72 bp | AAGTATGGGATCATCAGCACTCCGGGGTGTTTGCTTTaGAAATTACTGACCCAGTTGGCAATCAGTGTGGAC | + |
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Preference number: 6 (lower is better) Translates to: KYGIISTPGCLL*KLLTQLAISVD Trigger: GTCCACACTGATTGCCAACTGGGTCAGTAATTTCCAAAGCAAACACCCCGGAGTGCTGATGATCCCATACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061458.9 ENSMUST00000075632.14 ENSMUST00000217747.2 ENSMUST00000219108.2 |
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| CDS CAA 72 bp | CCCACAAAGTATGGGATCATCAGCACTCCGGGGTGTTaGCTTTGGAAATTACTGACCCAGTTGGCAATCAGT | + |
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Preference number: 6 (lower is better) Translates to: PTKYGIISTPGC*LWKLLTQLAIS Trigger: ACTGATTGCCAACTGGGTCAGTAATTTCCAAAGCAAACACCCCGGAGTGCTGATGATCCCATACTTTGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061458.9 ENSMUST00000075632.14 ENSMUST00000217747.2 ENSMUST00000219108.2 |
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| CDS CAA 72 bp | GTGGACAAGGTGCAGCCTGGTCCACAAGCTTGGGTTTaGGATTTTCGATATGAAATCTGTGATGCTGGGGTT | + |
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Preference number: 6 (lower is better) Translates to: VDKVQPGPQAWV*DFRYEICDAGV Trigger: AACCCCAGCATCACAGATTTCATATCGAAAATCCAAAACCCAAGCTTGTGGACCAGGCTGCACCTTGTCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075632.14 |
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| CDS CAA 72 bp | AGGCTGCATTCCAGCACTGAGAGTGTGGTTCGCTTCTaGAGTTTCTGGAATTGTTCCCCTTCTATCTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: RLHSSTESVVRF*SFWNCSPSILA Trigger: TGCCAAGATAGAAGGGGAACAATTCCAGAAACTCAAGAAGCGAACCACACTCTCAGTGCTGGAATGCAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075632.14 |
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| CDS CAA 90 bp | ATCCCAGTAGTGGACAAGGTGCAGCCTGGTCCACAAGCTTGGGTTTaGGATTTTCGATATGAAATCTGTGATGCTGGGGTTCGTGATGAA | + |
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Preference number: 6 (lower is better) Translates to: IPVVDKVQPGPQAWV*DFRYEICDAGVRDE Trigger: TTCATCACGAACCCCAGCATCACAGATTTCATATCGAAAATCCAAAACCCAAGCTTGTGGACCAGGCTGCACCTTGTCCACTACTGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075632.14 |
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| CDS CCA 72 bp | CCAGTAGTGGACAAGGTGCAGCCTGGTCCACAAGCTTaGGTTTTGGATTTTCGATATGAAATCTGTGATGCT | + |
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Preference number: 6 (lower is better) Translates to: PVVDKVQPGPQA*VLDFRYEICDA Trigger: AGCATCACAGATTTCATATCGAAAATCCAAAACCCAAGCTTGTGGACCAGGCTGCACCTTGTCCACTACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075632.14 |
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| CDS CAA 72 bp | AATCTGACAGGAAGCCCTTTGCCAATGATCTTAGCCTaGAGCTTTCCAACCTTCATCTTCCCCTGTTCGTTC | + |
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Preference number: 6 (lower is better) Translates to: NLTGSPLPMILA*SFPTFIFPCSF Trigger: GAACGAACAGGGGAAGATGAAGGTTGGAAAGCTCAAGGCTAAGATCATTGGCAAAGGGCTTCCTGTCAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061458.9 ENSMUST00000075632.14 ENSMUST00000217747.2 ENSMUST00000219108.2 |
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| CDS CAA 72 bp | AAAGTATGGGATCATCAGCACTCCGGGGTGTTTGCTTaGGAAATTACTGACCCAGTTGGCAATCAGTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: KVWDHQHSGVFA*EITDPVGNQCG Trigger: TCCACACTGATTGCCAACTGGGTCAGTAATTTCCAAAGCAAACACCCCGGAGTGCTGATGATCCCATACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061458.9 ENSMUST00000075632.14 ENSMUST00000217747.2 ENSMUST00000219108.2 |
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| CDS CAA 90 bp | CCGGAAGTAGAAAAATTGAAATTGAGATTTCTTCCGGAATACTGCTaGGATGATCTCGAACTCTGTCAGGCTGCAGTTGGGAGTCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: PEVEKLKLRFLPEYC*DDLELCQAAVGSLE Trigger: CTCAAGACTCCCAACTGCAGCCTGACAGAGTTCGAGATCATCCAAGCAGTATTCCGGAAGAAATCTCAATTTCAATTTTTCTACTTCCGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000061458.9 ENSMUST00000075632.14 ENSMUST00000217747.2 ENSMUST00000219108.2 |
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| CDS TCA 72 bp | GTACCAGGATGCATGGCTTTAAGCTTATGGCGGCTATaGACACTTCTACGAGAAGTGAAAAGACCAAGACAT | + |
|
Preference number: 6 (lower is better) Translates to: VPGCMALSLWRL*TLLREVKRPRH Trigger: ATGTCTTGGTCTTTTCACTTCTCGTAGAAGTGTTCATAGCCGCCATAAGCTTAAAGCCATGCATCCTGGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075632.14 ENSMUST00000219108.2 |
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| CDS CCA 72 bp | ATATGTAAGGTAGGATGGGTTTCTGGCGCTTTAAAATaGGTTGACCGTTGTATCTTTGTCCGGTCTCACTTG | + |
|
Preference number: 6 (lower is better) Translates to: ICKVGWVSGALK*VDRCIFVRSHL Trigger: CAAGTGAGACCGGACAAAGATACAACGGTCAACCCATTTTAAAGCGCCAGAAACCCATCCTACCTTACATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061458.9 ENSMUST00000075632.14 ENSMUST00000217747.2 ENSMUST00000219108.2 |
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| CDS CAA 72 bp | GACAAGAGCAAAATGGACTTACAAGTTGGAAGGGAATaGATTCTGAGAATGGAGTCTAACCCCGAACCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: DKSKMDLQVGRE*ILRMESNPEPA Trigger: AGCAGGTTCGGGGTTAGACTCCATTCTCAGAATCAATTCCCTTCCAACTTGTAAGTCCATTTTGCTCTTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061458.9 ENSMUST00000075632.14 ENSMUST00000217747.2 ENSMUST00000219108.2 |
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| CDS CCA 72 bp | CTTGAAAATCTAGAGTGGAACATATGTAAGGTAGGATaGGTTTCTGGCGCTTTAAAATGGGTTGACCGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LENLEWNICKVG*VSGALKWVDRC Trigger: ACAACGGTCAACCCATTTTAAAGCGCCAGAAACCCATCCTACCTTACATATGTTCCACTCTAGATTTTCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061458.9 ENSMUST00000075632.14 ENSMUST00000217747.2 ENSMUST00000219108.2 |
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| CDS CAA 72 bp | CCATTTTTGGCAGCAATGTATAGATTCTGTTCTCCCTaGGATAAACTTTCGAAGTCCTTCACTTGGGATAAC | + |
|
Preference number: 6 (lower is better) Translates to: PFLAAMYRFCSP*DKLSKSFTWDN Trigger: GTTATCCCAAGTGAAGGACTTCGAAAGTTTATCCAAGGGAGAACAGAATCTATACATTGCTGCCAAAAATGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000061458.9 ENSMUST00000075632.14 ENSMUST00000217747.2 ENSMUST00000219108.2 |
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| CDS CCA 72 bp | CATTTTTGGCAGCAATGTATAGATTCTGTTCTCCCTTaGATAAACTTTCGAAGTCCTTCACTTGGGATAACA | + |
|
Preference number: 6 (lower is better) Translates to: HFWQQCIDSVLP*INFRSPSLGIT Trigger: TGTTATCCCAAGTGAAGGACTTCGAAAGTTTATCCAAGGGAGAACAGAATCTATACATTGCTGCCAAAAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000061458.9 ENSMUST00000075632.14 ENSMUST00000217747.2 ENSMUST00000219108.2 |
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| CDS TCA 72 bp | CTCCTCTTCCTCATTAAAAGTTCGCAGCAGCGAATTTaGTGTCCGGAAGTAGAAAAATTGAAATTGAGATTT | + |
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Preference number: 6 (lower is better) Translates to: LLFLIKSSQQRI*CPEVEKLKLRF Trigger: AAATCTCAATTTCAATTTTTCTACTTCCGGACATCAAATTCGCTGCTGCGAACTTTTAATGAGGAAGAGGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061458.9 ENSMUST00000075632.14 ENSMUST00000217747.2 ENSMUST00000219108.2 |
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