Pregenerated sensors for TTC39D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046196Ensembl transcript IDs: ENSMUST00000053168.4, ENSMUST00000134652.2
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CGTGTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTGCTTCAGATGCACTGTCGTaGAGCAAGGCCAGGCCCACT | + |
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Preference number: 4 (lower is better) Translates to: RVPFLVSRFLAAATWIFASDALS*SKARPT Trigger: AGTGGGCCTGGCCTTGCTCCACGACAGTGCATCTGA...AGCAAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGACACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR GCA 90 bp | TGGCGTGTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTCAGCCTTCAGGTGCTTaGCCAAGTGCTTCAGGCACA | + |
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Preference number: 4 (lower is better) Translates to: WRVPFLVSRFLAAATWIFQPSGA*PSASGT Trigger: TGTGCCTGAAGCACTTGGGCAAGCACCTGAAGGCTG...AAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGACACGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR TCA 90 bp | GTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTGCTTTTCACTCCAGGCGTAGATaGACTCCAGAAGGGGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: VPFLVSRFLAAATWIFAFHSRRR*TPEGAV Trigger: CACAGCCCCTTCTGGAGTTCATCTACGCCTGGAGTG...AAAAGCAAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CCA 90 bp | GTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTGCTTTTTCAGATGCACTGTCGTaGAGCAAGGCCAGGCCCACT | + |
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Preference number: 4 (lower is better) Translates to: VPFLVSRFLAAATWIFAFSDALS*SKARPT Trigger: AGTGGGCCTGGCCTTGCTCCACGACAGTGCATCTGA...AAAAGCAAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR GCA 90 bp | GTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTGCTTTTCAGCCTTCAGGTGCTTaGCCAAGTGCTTCAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VPFLVSRFLAAATWIFAFQPSGA*PSASGT Trigger: TGTGCCTGAAGCACTTGGGCAAGCACCTGAAGGCTG...AAAAGCAAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR GCA 90 bp | TGGCGTGTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTGCCTGCTTCCAATTCTaGAAGAAAATATGGCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: WRVPFLVSRFLAAATWIFACFQF*KKIWHH Trigger: GTGGTGCCATATTTTCTTGCAGAATTGGAAGCAGGC...AAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGACACGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CCA 90 bp | TGGCGTGTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTTTCTGCAAGAAAATATaGCACCACATGAGCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WRVPFLVSRFLAAATWIFFCKKI*HHMSSQ Trigger: CTGGGAGCTCATGTGGTGCCATATTTTCTTGCAGAA...AAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGACACGCCA 46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR TCA 90 bp | GTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTGCTTTTAAATATGGCACCACATaGGCTCCCAGTAACAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VPFLVSRFLAAATWIFAFKYGTT*APSNRG Trigger: ACCTCTGTTACTGGGAGCTCATGTGGTGCCATATTT...AAAAGCAAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CCA 90 bp | GTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTGCTTTTGCGTTCATTCCGATCTaGATATCCTGTGGCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VPFLVSRFLAAATWIFAFAFIPI*ISCGSK Trigger: CTTTGAGCCACAGGATATCCAGATCGGAATGAACGC...AAAAGCAAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR TCA 90 bp | TGGCGTGTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTAAGAGCCTAAAATTTTaGTTCTCAAGCTATCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: WRVPFLVSRFLAAATWIFKSLKF*FSSYPR Trigger: GCGTGGATAGCTTGAGAATCAAAATTTTAGGCTCTT...AAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGACACGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR GCA 90 bp | CGTGTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTGCTAAGGCTCATTGTTGTTaGCACAGGGATAATTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: RVPFLVSRFLAAATWIFAKAHCC*HRDNFM Trigger: CATGAAATTATCCCTGTGGCAACAACAATGAGCCTT...AGCAAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGACACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR GCA 90 bp | TGGCGTGTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTAAGATGTTGTTTATATaGGGTTCAGATGCACTGTCG | + |
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Preference number: 4 (lower is better) Translates to: WRVPFLVSRFLAAATWIFKMLFI*GSDALS Trigger: CGACAGTGCATCTGAACCGCATATAAACAACATCTT...AAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGACACGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CCA 90 bp | TGGCGTGTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTCTGTCTTTTAGATTGTaGGATCTAGTTACTCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: WRVPFLVSRFLAAATWIFLSFRL*DLVTLT Trigger: GGTGAGAGTAACTAGATCCCACAATCTAAAAGACAG...AAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGACACGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CCA 90 bp | CGTGTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTGCTCTGTCTTTTAGATTGTaGGATCTAGTTACTCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: RVPFLVSRFLAAATWIFALSFRL*DLVTLT Trigger: GGTGAGAGTAACTAGATCCCACAATCTAAAAGACAG...AGCAAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGACACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CCA 90 bp | GTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTGCTTTTACAGGGATAATTTCATaGGCATCCTCGAACTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VPFLVSRFLAAATWIFAFTGIIS*ASSNLS Trigger: GGACAAGTTCGAGGATGCCCATGAAATTATCCCTGT...AAAAGCAAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CCA 90 bp | TGGCGTGTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTCTGTGGGTTTTACTTTaGTTCTCAGGCATAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WRVPFLVSRFLAAATWIFLWVLL*FSGISS Trigger: AGAACTTATGCCTGAGAACCAAAGTAAAACCCACAG...AAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGACACGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CCA 90 bp | TGGCGTGTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTCCAATCAAGTGTCTGTaGGTTTTACTTTGGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WRVPFLVSRFLAAATWIFPIKCL*VLLWFS Trigger: TGAGAACCAAAGTAAAACCCACAGACACTTGATTGG...AAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGACACGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR TCA 90 bp | TGGCGTGTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTGTGAAAACATCAGATTaGATACCCCAACTCCAAATT | + |
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Preference number: 4 (lower is better) Translates to: WRVPFLVSRFLAAATWIFVKTSD*IPQLQI Trigger: AATTTGGAGTTGGGGTATTCAATCTGATGTTTTCAC...AAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGACACGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR TCA 90 bp | CGTGTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTGCTTTTGGGTGGTACAAGTaGAAACATCAGATTGAATAC | + |
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Preference number: 4 (lower is better) Translates to: RVPFLVSRFLAAATWIFAFGWYK*KHQIEY Trigger: GTATTCAATCTGATGTTTTCACTTGTACCACCCAAA...AGCAAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGACACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CCA 90 bp | CGTGTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTGCTGAAGTTTCAGTGATTTaGGTGGTACAAGTGAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: RVPFLVSRFLAAATWIFAEVSVI*VVQVKT Trigger: TGTTTTCACTTGTACCACCCAAATCACTGAAACTTC...AGCAAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGACACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CCA 90 bp | GTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTGCTTTTGTAGCCGGGCTTCCATaGAATAGTCTTTATAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPFLVSRFLAAATWIFAFVAGLP*NSLYSS Trigger: AGAACTATAAAGACTATTCCATGGAAGCCCGGCTAC...AAAAGCAAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR TCA 90 bp | TTGACTGATTGTAGATATTTCACTCATACTACACAGAAGCACACTGGGTTAAGAAAATATGGCACCACATaGGCTCCCAGTAACAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: LTDCRYFTHTTQKHTGLRKYGTT*APSNRG Trigger: ACCTCTGTTACTGGGAGCTCATGTGGTGCCATATTT...TCTTAACCCAGTGTGCTTCTGTGTAGTATGAGTGAAATATCTACAATCAGTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR TCA 90 bp | GTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTGCTTTTAAGAGCCTAAAATTTTaGTTCTCAAGCTATCCACGC | + |
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Preference number: 4 (lower is better) Translates to: VPFLVSRFLAAATWIFAFKSLKF*FSSYPR Trigger: GCGTGGATAGCTTGAGAATCAAAATTTTAGGCTCTT...AAAAGCAAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR GCA 90 bp | GTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTGCTTTTAAGGCTCATTGTTGTTaGCACAGGGATAATTTCATG | + |
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Preference number: 4 (lower is better) Translates to: VPFLVSRFLAAATWIFAFKAHCC*HRDNFM Trigger: CATGAAATTATCCCTGTGGCAACAACAATGAGCCTT...AAAAGCAAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR GCA 90 bp | TGGCGTGTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTAATACAATCCAGTTGTaGATTCTTCCAAGGATGATA | + |
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Preference number: 4 (lower is better) Translates to: WRVPFLVSRFLAAATWIFNTIQL*ILPRMI Trigger: TATCATCCTTGGAAGAATGCACAACTGGATTGTATT...AAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGACACGCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CCA 90 bp | GTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTGCTTTTCTGTGGGTTTTACTTTaGTTCTCAGGCATAAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: VPFLVSRFLAAATWIFAFLWVLL*FSGISS Trigger: AGAACTTATGCCTGAGAACCAAAGTAAAACCCACAG...AAAAGCAAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CCA 90 bp | TGGCGTGTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTTTCATAGTAACTATATaGCACCAAATAGTGGTCGTA | + |
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Preference number: 4 (lower is better) Translates to: WRVPFLVSRFLAAATWIFFIVTI*HQIVVV Trigger: TACGACCACTATTTGGTGCCATATAGTTACTATGAA...AAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGACACGCCA 41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR TCA 90 bp | GTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTGCTTTTAGTAGAAGAGAAGAGTaGACACACTTAAGATGTTGT | + |
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Preference number: 4 (lower is better) Translates to: VPFLVSRFLAAATWIFAFSRREE*THLRCC Trigger: ACAACATCTTAAGTGTGTTCACTCTTCTCTTCTACT...AAAAGCAAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CCA 90 bp | TTGACTGATTGTAGATATTTCACTCATACTACACAGAAGCACACTGGGTTAAGAACAGGGATAATTTCATaGGCATCCTCGAACTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: LTDCRYFTHTTQKHTGLRTGIIS*ASSNLS Trigger: GGACAAGTTCGAGGATGCCCATGAAATTATCCCTGT...TCTTAACCCAGTGTGCTTCTGTGTAGTATGAGTGAAATATCTACAATCAGTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CCA 90 bp | TTGACTGATTGTAGATATTTCACTCATACTACACAGAAGCACACTGGGTTAAGATTCTGCAAGAAAATATaGCACCACATGAGCTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LTDCRYFTHTTQKHTGLRFCKKI*HHMSSQ Trigger: CTGGGAGCTCATGTGGTGCCATATTTTCTTGCAGAA...TCTTAACCCAGTGTGCTTCTGTGTAGTATGAGTGAAATATCTACAATCAGTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR GCA 90 bp | GTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTGCTTTTTTTTTCGGAAATTGTTaGAGGTTTTCAAAGCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: VPFLVSRFLAAATWIFAFFFGNC*RFSKLP Trigger: AGGAAGCTTTGAAAACCTGCAACAATTTCCGAAAAA...AAAAGCAAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGAC 39% GC, longest homopolymer 9 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CCA 90 bp | GTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTGCTTTTTTCATAGTAACTATATaGCACCAAATAGTGGTCGTA | + |
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Preference number: 4 (lower is better) Translates to: VPFLVSRFLAAATWIFAFFIVTI*HQIVVV Trigger: TACGACCACTATTTGGTGCCATATAGTTACTATGAA...AAAAGCAAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGAC 39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CCA 90 bp | TTGACTGATTGTAGATATTTCACTCATACTACACAGAAGCACACTGGGTTAAGAGTAGCCGGGCTTCCATaGAATAGTCTTTATAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LTDCRYFTHTTQKHTGLRVAGLP*NSLYSS Trigger: AGAACTATAAAGACTATTCCATGGAAGCCCGGCTAC...TCTTAACCCAGTGTGCTTCTGTGTAGTATGAGTGAAATATCTACAATCAGTCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CCA 90 bp | TTGACTGATTGTAGATATTTCACTCATACTACACAGAAGCACACTGGGTTAAGACCAATCAAGTGTCTGTaGGTTTTACTTTGGTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: LTDCRYFTHTTQKHTGLRPIKCL*VLLWFS Trigger: TGAGAACCAAAGTAAAACCCACAGACACTTGATTGG...TCTTAACCCAGTGTGCTTCTGTGTAGTATGAGTGAAATATCTACAATCAGTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR TCA 90 bp | TTGACTGATTGTAGATATTTCACTCATACTACACAGAAGCACACTGGGTTAAGAGTGAAAACATCAGATTaGATACCCCAACTCCAAATT | + |
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Preference number: 4 (lower is better) Translates to: LTDCRYFTHTTQKHTGLRVKTSD*IPQLQI Trigger: AATTTGGAGTTGGGGTATTCAATCTGATGTTTTCAC...TCTTAACCCAGTGTGCTTCTGTGTAGTATGAGTGAAATATCTACAATCAGTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR TCA 90 bp | TTGACTGATTGTAGATATTTCACTCATACTACACAGAAGCACACTGGGTTAAGAAGTAGAAGAGAAGAGTaGACACACTTAAGATGTTGT | + |
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Preference number: 4 (lower is better) Translates to: LTDCRYFTHTTQKHTGLRSRREE*THLRCC Trigger: ACAACATCTTAAGTGTGTTCACTCTTCTCTTCTACT...TCTTAACCCAGTGTGCTTCTGTGTAGTATGAGTGAAATATCTACAATCAGTCAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CCA 90 bp | TTGACTGATTGTAGATATTTCACTCATACTACACAGAAGCACACTGGGTTAAGAGAAGTTTCAGTGATTTaGGTGGTACAAGTGAAAACA | + |
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Preference number: 4 (lower is better) Translates to: LTDCRYFTHTTQKHTGLREVSVI*VVQVKT Trigger: TGTTTTCACTTGTACCACCCAAATCACTGAAACTTC...TCTTAACCCAGTGTGCTTCTGTGTAGTATGAGTGAAATATCTACAATCAGTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS GCA 90 bp | GACTCGGAAGCCACTCCAGGCGTAGATGAACTCCAGAAGGGGCTGTaGTGTAAACCAGCCTGTCGTAGTACCATAGCGCTGACTTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: DSEATPGVDELQKGL*CKPACRSTIALTFL Trigger: GAGAAAAGTCAGCGCTATGGTACTACGACAGGCTGGTTTACAGCACAGCCCCTTCTGGAGTTCATCTACGCCTGGAGTGGCTTCCGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS TCA 90 bp | AGTTGTAGGCCTGCTTCCAATTCTGCAAGAAAATATGGCACCACATaGGCTCCCAGTAACAGAGGTGATGGACCTGCTTCCACTCGTTCT | + |
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Preference number: 5 (lower is better) Translates to: SCRPASNSARKYGTT*APSNRGDGPASTRS Trigger: AGAACGAGTGGAAGCAGGTCCATCACCTCTGTTACTGGGAGCTCATGTGGTGCCATATTTTCTTGCAGAATTGGAAGCAGGCCTACAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CAA 90 bp | TGGCGTGTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTTGGGCATCCTCGAACTaGTCCTCTGCTTCACTGTCT | + |
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Preference number: 5 (lower is better) Translates to: WRVPFLVSRFLAAATWIFWASSN*SSASLS Trigger: AGACAGTGAAGCAGAGGACAAGTTCGAGGATGCCCA...AAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGACACGCCA 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS CCA 90 bp | TTGTTGCAGGTTTTCAAAGCTTCCTTTGCGGCGTTCATTCCGATCTaGATATCCTGTGGCTCAAAGGTGAGGATGGCCTTGACAACCATA | + |
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Preference number: 5 (lower is better) Translates to: LLQVFKASFAAFIPI*ISCGSKVRMALTTI Trigger: TATGGTTGTCAAGGCCATCCTCACCTTTGAGCCACAGGATATCCAGATCGGAATGAACGCCGCAAAGGAAGCTTTGAAAACCTGCAACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS CCA 90 bp | TGGGCATCCTCGAACTTGTCCTCTGCTTCACTGTCTTTTAGATTGTaGGATCTAGTTACTCTCACCATTCTATCATGCTCGCCTTCACTC | + |
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Preference number: 5 (lower is better) Translates to: WASSNLSSASLSFRL*DLVTLTILSCSPSL Trigger: GAGTGAAGGCGAGCATGATAGAATGGTGAGAGTAACTAGATCCCACAATCTAAAAGACAGTGAAGCAGAGGACAAGTTCGAGGATGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS TCA 90 bp | GCAAGGCCAGGCCCACTTCTCTGTCTCCAGAATAGCCAACCATATTaGGAAGTTTCAGTGATTTGGGTGGTACAAGTGAAAACATCAGAT | + |
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Preference number: 5 (lower is better) Translates to: ARPGPLLCLQNSQPY*EVSVIWVVQVKTSD Trigger: ATCTGATGTTTTCACTTGTACCACCCAAATCACTGAAACTTCTCAATATGGTTGGCTATTCTGGAGACAGAGAAGTGGGCCTGGCCTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS CCA 90 bp | TTTCAAAGCTTCCTTTGCGGCGTTCATTCCGATCTGGATATCCTGTaGCTCAAAGGTGAGGATGGCCTTGACAACCATAAACATACTGTA | + |
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Preference number: 5 (lower is better) Translates to: FQSFLCGVHSDLDIL*LKGEDGLDNHKHTV Trigger: TACAGTATGTTTATGGTTGTCAAGGCCATCCTCACCTTTGAGCCACAGGATATCCAGATCGGAATGAACGCCGCAAAGGAAGCTTTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CAA 90 bp | CGTGTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTGCTACATTGACACCGCTTTaGAGGAAACTCAGCAAACTG | + |
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Preference number: 5 (lower is better) Translates to: RVPFLVSRFLAAATWIFATLTPL*RKLSKL Trigger: CAGTTTGCTGAGTTTCCTCAAAAGCGGTGTCAATGT...AGCAAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGACACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CAA 90 bp | CGTGTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTGCTATAAGCTCTATTTTCTaGCTCATGACTCGGAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: RVPFLVSRFLAAATWIFAISSIF*LMTRKP Trigger: TGGCTTCCGAGTCATGAGCAAGAAAATAGAGCTTAT...AGCAAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGACACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CAA 90 bp | TGGCGTGTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTACAAATACAATCCAGTaGTGCATTCTTCCAAGGATG | + |
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Preference number: 5 (lower is better) Translates to: WRVPFLVSRFLAAATWIFTNTIQ*CILPRM Trigger: CATCCTTGGAAGAATGCACAACTGGATTGTATTTGT...AAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGACACGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CAA 90 bp | GTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTGCTTTTAAGGTGAGGATGGCCTaGACAACCATAAACATACTG | + |
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Preference number: 5 (lower is better) Translates to: VPFLVSRFLAAATWIFAFKVRMA*TTINIL Trigger: CAGTATGTTTATGGTTGTCAAGGCCATCCTCACCTT...AAAAGCAAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CAA 90 bp | GTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTGCTTTTACATTGACACCGCTTTaGAGGAAACTCAGCAAACTG | + |
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Preference number: 5 (lower is better) Translates to: VPFLVSRFLAAATWIFAFTLTPL*RKLSKL Trigger: CAGTTTGCTGAGTTTCCTCAAAAGCGGTGTCAATGT...AAAAGCAAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS CCA 90 bp | AAGGATGATAAAAGGCTCATTGTTGTTGCCACAGGGATAATTTCATaGGCATCCTCGAACTTGTCCTCTGCTTCACTGTCTTTTAGATTG | + |
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Preference number: 5 (lower is better) Translates to: KDDKRLIVVATGIIS*ASSNLSSASLSFRL Trigger: CAATCTAAAAGACAGTGAAGCAGAGGACAAGTTCGAGGATGCCCATGAAATTATCCCTGTGGCAACAACAATGAGCCTTTTATCATCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CAA 90 bp | CGTGTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTGCTTGTAATTCCTCCTCTTaGATAGACTTTATTCCCTGT | + |
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Preference number: 5 (lower is better) Translates to: RVPFLVSRFLAAATWIFACNSSS*IDFIPC Trigger: ACAGGGAATAAAGTCTATCAAAGAGGAGGAATTACA...AGCAAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGACACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CAA 90 bp | GTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTGCTTTTATAAGCTCTATTTTCTaGCTCATGACTCGGAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: VPFLVSRFLAAATWIFAFISSIF*LMTRKP Trigger: TGGCTTCCGAGTCATGAGCAAGAAAATAGAGCTTAT...AAAAGCAAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CAA 90 bp | GTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTGCTTTTTGTCGAGGTTTTTCATaGCATTGGCATAGTCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: VPFLVSRFLAAATWIFAFCRGFS*HWHSLL Trigger: AAGGAGACTATGCCAATGCAATGAAAAACCTCGACA...AAAAGCAAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CAA 90 bp | GTCCCTTTCTTAGTTAGCAGGTTCTTAGCAGCTGCCACTTGGATTTTTGCTTTTAGAAGTTTCAGTGATTaGGGTGGTACAAGTGAAAAC | + |
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Preference number: 5 (lower is better) Translates to: VPFLVSRFLAAATWIFAFRSFSD*GGTSEN Trigger: GTTTTCACTTGTACCACCCAAATCACTGAAACTTCT...AAAAGCAAAAATCCAAGTGGCAGCTGCTAAGAACCTGCTAACTAAGAAAGGGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS TCA 90 bp | CAACACCAACAACTACACGCACATAGTTGTAGTAGAAGAGAAGAGTaGACACACTTAAGATGTTGTTTATATGCGGTTCAGATGCACTGT | + |
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Preference number: 5 (lower is better) Translates to: QHQQLHAHSCSRREE*THLRCCLYAVQMHC Trigger: ACAGTGCATCTGAACCGCATATAAACAACATCTTAAGTGTGTTCACTCTTCTCTTCTACTACAACTATGTGCGTGTAGTTGTTGGTGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS GCA 90 bp | TGGCGTCTGAGAACCTGTTATTTAGAAACAAATACAATCCAGTTGTaGATTCTTCCAAGGATGATAAAAGGCTCATTGTTGTTGCCACAG | + |
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Preference number: 5 (lower is better) Translates to: WRLRTCYLETNTIQL*ILPRMIKGSLLLPQ Trigger: CTGTGGCAACAACAATGAGCCTTTTATCATCCTTGGAAGAATGCACAACTGGATTGTATTTGTTTCTAAATAACAGGTTCTCAGACGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS CCA 90 bp | ACTCCAAATTTTATCCCTCCAATCAAGTGTCTGTGGGTTTTACTTTaGTTCTCAGGCATAAGTTCTAAGACCTGTTGGCAGTCTTTGTAT | + |
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Preference number: 5 (lower is better) Translates to: TPNFIPPIKCLWVLL*FSGISSKTCWQSLY Trigger: ATACAAAGACTGCCAACAGGTCTTAGAACTTATGCCTGAGAACCAAAGTAAAACCCACAGACACTTGATTGGAGGGATAAAATTTGGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CAA 90 bp | TTGACTGATTGTAGATATTTCACTCATACTACACAGAAGCACACTGGGTTAAGAAAGGTGAGGATGGCCTaGACAACCATAAACATACTG | + |
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Preference number: 5 (lower is better) Translates to: LTDCRYFTHTTQKHTGLRKVRMA*TTINIL Trigger: CAGTATGTTTATGGTTGTCAAGGCCATCCTCACCTT...TCTTAACCCAGTGTGCTTCTGTGTAGTATGAGTGAAATATCTACAATCAGTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CAA 90 bp | TTGACTGATTGTAGATATTTCACTCATACTACACAGAAGCACACTGGGTTAAGATGTCGAGGTTTTTCATaGCATTGGCATAGTCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: LTDCRYFTHTTQKHTGLRCRGFS*HWHSLL Trigger: AAGGAGACTATGCCAATGCAATGAAAAACCTCGACA...TCTTAACCCAGTGTGCTTCTGTGTAGTATGAGTGAAATATCTACAATCAGTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CAA 90 bp | TTGACTGATTGTAGATATTTCACTCATACTACACAGAAGCACACTGGGTTAAGAACAAATACAATCCAGTaGTGCATTCTTCCAAGGATG | + |
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Preference number: 5 (lower is better) Translates to: LTDCRYFTHTTQKHTGLRTNTIQ*CILPRM Trigger: CATCCTTGGAAGAATGCACAACTGGATTGTATTTGT...TCTTAACCCAGTGTGCTTCTGTGTAGTATGAGTGAAATATCTACAATCAGTCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS-3UTR CAA 90 bp | TTGACTGATTGTAGATATTTCACTCATACTACACAGAAGCACACTGGGTTAAGATGTAATTCCTCCTCTTaGATAGACTTTATTCCCTGT | + |
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Preference number: 5 (lower is better) Translates to: LTDCRYFTHTTQKHTGLRCNSSS*IDFIPC Trigger: ACAGGGAATAAAGTCTATCAAAGAGGAGGAATTACA...TCTTAACCCAGTGTGCTTCTGTGTAGTATGAGTGAAATATCTACAATCAGTCAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS GCA 72 bp | GCCACTCCAGGCGTAGATGAACTCCAGAAGGGGCTGTaGTGTAAACCAGCCTGTCGTAGTACCATAGCGCTG | + |
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Preference number: 6 (lower is better) Translates to: ATPGVDELQKGL*CKPACRSTIAL Trigger: CAGCGCTATGGTACTACGACAGGCTGGTTTACAGCACAGCCCCTTCTGGAGTTCATCTACGCCTGGAGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS TCA 72 bp | CCTGCTTCCAATTCTGCAAGAAAATATGGCACCACATaGGCTCCCAGTAACAGAGGTGATGGACCTGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: PASNSARKYGTT*APSNRGDGPAS Trigger: GGAAGCAGGTCCATCACCTCTGTTACTGGGAGCTCATGTGGTGCCATATTTTCTTGCAGAATTGGAAGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS CCA 72 bp | GTTTTCAAAGCTTCCTTTGCGGCGTTCATTCCGATCTaGATATCCTGTGGCTCAAAGGTGAGGATGGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: VFKASFAAFIPI*ISCGSKVRMAL Trigger: CAAGGCCATCCTCACCTTTGAGCCACAGGATATCCAGATCGGAATGAACGCCGCAAAGGAAGCTTTGAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS CCA 72 bp | AAGATGTTGTTTATATGCGGTTCAGATGCACTGTCGTaGAGCAAGGCCAGGCCCACTTCTCTGTCTCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: KMLFICGSDALS*SKARPTSLSPE Trigger: TTCTGGAGACAGAGAAGTGGGCCTGGCCTTGCTCCACGACAGTGCATCTGAACCGCATATAAACAACATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS CCA 72 bp | TTCCTTTGCGGCGTTCATTCCGATCTGGATATCCTGTaGCTCAAAGGTGAGGATGGCCTTGACAACCATAAA | + |
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Preference number: 6 (lower is better) Translates to: FLCGVHSDLDIL*LKGEDGLDNHK Trigger: TTTATGGTTGTCAAGGCCATCCTCACCTTTGAGCCACAGGATATCCAGATCGGAATGAACGCCGCAAAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS CAA 72 bp | ATCTGGATATCCTGTGGCTCAAAGGTGAGGATGGCCTaGACAACCATAAACATACTGTATATCAGGGCGTGG | + |
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Preference number: 6 (lower is better) Translates to: IWISCGSKVRMA*TTINILYIRAW Trigger: CCACGCCCTGATATACAGTATGTTTATGGTTGTCAAGGCCATCCTCACCTTTGAGCCACAGGATATCCAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS CAA 90 bp | TTCATTCCGATCTGGATATCCTGTGGCTCAAAGGTGAGGATGGCCTaGACAACCATAAACATACTGTATATCAGGGCGTGGTATGAACTG | + |
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Preference number: 6 (lower is better) Translates to: FIPIWISCGSKVRMA*TTINILYIRAWYEL Trigger: CAGTTCATACCACGCCCTGATATACAGTATGTTTATGGTTGTCAAGGCCATCCTCACCTTTGAGCCACAGGATATCCAGATCGGAATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS GCA 72 bp | TTTTCGGAAATTGTTGCAGGTTTTCAAAGCTTCCTTTaGGGCGTTCATTCCGATCTGGATATCCTGTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: FSEIVAGFQSFL*GVHSDLDILWL Trigger: GAGCCACAGGATATCCAGATCGGAATGAACGCCGCAAAGGAAGCTTTGAAAACCTGCAACAATTTCCGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS TCA 72 bp | GGCCCACTTCTCTGTCTCCAGAATAGCCAACCATATTaGGAAGTTTCAGTGATTTGGGTGGTACAAGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: GPLLCLQNSQPY*EVSVIWVVQVK Trigger: TTTCACTTGTACCACCCAAATCACTGAAACTTCTCAATATGGTTGGCTATTCTGGAGACAGAGAAGTGGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS GCA 72 bp | GGCCTTTCAGCAGATTTAACAAGCTCATGTCATCTATaGCGTACTCCTCGTTTGGGTTTTCACTCAAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: GLSADLTSSCHL*RTPRLGFHSKA Trigger: AGCTTTTGAGTGAAAACCCAAACGAGGAGTACGGCATAGATGACATGAGCTTGTTAAATCTGCTGAAAGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS CAA 72 bp | TTTTTCGGAAATTGTTGCAGGTTTTCAAAGCTTCCTTaGCGGCGTTCATTCCGATCTGGATATCCTGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: FFGNCCRFSKLP*RRSFRSGYPVA Trigger: AGCCACAGGATATCCAGATCGGAATGAACGCCGCAAAGGAAGCTTTGAAAACCTGCAACAATTTCCGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS CAA 90 bp | CTCATTGTTGTTGCCACAGGGATAATTTCATGGGCATCCTCGAACTaGTCCTCTGCTTCACTGTCTTTTAGATTGTGGGATCTAGTTACT | + |
|
Preference number: 6 (lower is better) Translates to: LIVVATGIISWASSN*SSASLSFRLWDLVT Trigger: AGTAACTAGATCCCACAATCTAAAAGACAGTGAAGCAGAGGACAAGTTCGAGGATGCCCATGAAATTATCCCTGTGGCAACAACAATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS CCA 72 bp | TCGAACTTGTCCTCTGCTTCACTGTCTTTTAGATTGTaGGATCTAGTTACTCTCACCATTCTATCATGCTCG | + |
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Preference number: 6 (lower is better) Translates to: SNLSSASLSFRL*DLVTLTILSCS Trigger: CGAGCATGATAGAATGGTGAGAGTAACTAGATCCCACAATCTAAAAGACAGTGAAGCAGAGGACAAGTTCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS CCA 72 bp | TTTATCCCTCCAATCAAGTGTCTGTGGGTTTTACTTTaGTTCTCAGGCATAAGTTCTAAGACCTGTTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: FIPPIKCLWVLL*FSGISSKTCWQ Trigger: CTGCCAACAGGTCTTAGAACTTATGCCTGAGAACCAAAGTAAAACCCACAGACACTTGATTGGAGGGATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS CAA 72 bp | TCCTCGAACTTGTCCTCTGCTTCACTGTCTTTTAGATaGTGGGATCTAGTTACTCTCACCATTCTATCATGC | + |
|
Preference number: 6 (lower is better) Translates to: SSNLSSASLSFR*WDLVTLTILSC Trigger: GCATGATAGAATGGTGAGAGTAACTAGATCCCACAATCTAAAAGACAGTGAAGCAGAGGACAAGTTCGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS CCA 72 bp | CCAACTCCAAATTTTATCCCTCCAATCAAGTGTCTGTaGGTTTTACTTTGGTTCTCAGGCATAAGTTCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: PTPNFIPPIKCL*VLLWFSGISSK Trigger: CTTAGAACTTATGCCTGAGAACCAAAGTAAAACCCACAGACACTTGATTGGAGGGATAAAATTTGGAGTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS CAA 90 bp | TCAGCAGATTTAACAAGCTCATGTCATCTATGCCGTACTCCTCGTTaGGGTTTTCACTCAAAAGCTCTTTGCCTTTGTCAATTATCAATA | + |
|
Preference number: 6 (lower is better) Translates to: SADLTSSCHLCRTPR*GFHSKALCLCQLSI Trigger: TATTGATAATTGACAAAGGCAAAGAGCTTTTGAGTGAAAACCCAAACGAGGAGTACGGCATAGATGACATGAGCTTGTTAAATCTGCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS TCA 72 bp | CAACTACACGCACATAGTTGTAGTAGAAGAGAAGAGTaGACACACTTAAGATGTTGTTTATATGCGGTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: QLHAHSCSRREE*THLRCCLYAVQ Trigger: CTGAACCGCATATAAACAACATCTTAAGTGTGTTCACTCTTCTCTTCTACTACAACTATGTGCGTGTAGTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS CAA 90 bp | TCATCTATGCCGTACTCCTCGTTTGGGTTTTCACTCAAAAGCTCTTaGCCTTTGTCAATTATCAATAGCCAACTTGAAATAAGCTCTATT | + |
|
Preference number: 6 (lower is better) Translates to: SSMPYSSFGFSLKSS*PLSIINSQLEISSI Trigger: AATAGAGCTTATTTCAAGTTGGCTATTGATAATTGACAAAGGCAAAGAGCTTTTGAGTGAAAACCCAAACGAGGAGTACGGCATAGATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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| CDS CAA 90 bp | CCATGGAATAGTCTTTATAGTTCTTTATGTTGTCGAGGTTTTTCATaGCATTGGCATAGTCTCCTTTTAGATAGTGTAGCATTCCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: PWNSLYSSLCCRGFS*HWHSLLLDSVAFPV Trigger: AACTGGGAATGCTACACTATCTAAAAGGAGACTATGCCAATGCAATGAAAAACCTCGACAACATAAAGAACTATAAAGACTATTCCATGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053168.4 ENSMUST00000134652.2 |
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