Pregenerated sensors for TTC39C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024424Ensembl transcript IDs: ENSMUST00000025294.9, ENSMUST00000169401.8, ENSMUST00000234255.2, ENSMUST00000234966.2, ENSMUST00000234974.2
Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | AAATATAGGTGCTGCGTGGCTAGGACTGGCAGCAGGGACATGCTGTaGACTTATCTTCTCAGCTCCTGTTTGGTCGGCTCCATTTTGAGA | + |
Preference number: 1 (lower is better) Translates to: KYRCCVARTGSRDML*TYLLSSCLVGSILR Trigger: TCTCAAAATGGAGCCGACCAAACAGGAGCTGAGAAGATAAGTCCACAGCATGTCCCTGCTGCCAGTCCTAGCCACGCAGCACCTATATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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3UTR CCA 90 bp | ACAAGGTCACTTAACCCTCTCCCAGGTCGGGCATTGCTCTCGTTATaGACATCTTTATTACTCCATAGCTACATGTTTAAAAGAGGAATC | + |
Preference number: 1 (lower is better) Translates to: TRSLNPLPGRALLSL*TSLLLHSYMFKRGI Trigger: GATTCCTCTTTTAAACATGTAGCTATGGAGTAATAAAGATGTCCATAACGAGAGCAATGCCCGACCTGGGAGAGGGTTAAGTGACCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234966.2 |
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3UTR-3UTR CCA 90 bp | AGTATGTCAGTGACACCAGGAAACCCATCCCTGGCCCAGGTGGTCTCCAGAAGAGAGGCCAGAGCAGCGTaGATGCGGACGTGCAATCTG | + |
Preference number: 2 (lower is better) Translates to: SMSVTPGNPSLAQVVSRREARAA*MRTCNL Trigger: CAGATTGCACGTCCGCATCCACGCTGCTCTGGCCTC...TCTTCTGGAGACCACCTGGGCCAGGGATGGGTTTCCTGGTGTCACTGACATACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234255.2 |
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3UTR-3UTR CCA 90 bp | CTGTGGACTTATCTTCTCAGCTCCTGTTTGGTCGGCTCCATTTTGAGAGCTTTTAGTGCTGACTCTGGGTaGAGGGGACGGAGGGGCCAC | + |
Preference number: 2 (lower is better) Translates to: LWTYLLSSCLVGSILRAFSADSG*RGRRGH Trigger: GTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACT...AAAAGCTCTCAAAATGGAGCCGACCAAACAGGAGCTGAGAAGATAAGTCCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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3UTR-3UTR CCA 90 bp | CAGGTCGGGCATTGCTCTCGTTATGGACATCTTTATTACTCCATAGCTACATGTAGTGCTGACTCTGGGTaGAGGGGACGGAGGGGCCAC | + |
Preference number: 2 (lower is better) Translates to: QVGHCSRYGHLYYSIATCSADSG*RGRRGH Trigger: GTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACT...ACATGTAGCTATGGAGTAATAAAGATGTCCATAACGAGAGCAATGCCCGACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234966.2 |
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3UTR-3UTR CCA 90 bp | GAAACCCATCCCTGGCCCAGGTGGTCTCCAGAAGAAAAGCTGATCTTCAAGAGACATCCCTGGCCCAGGTaGTCTCCAGAAGAAAAGCTG | + |
Preference number: 2 (lower is better) Translates to: ETHPWPRWSPEEKLIFKRHPWPR*SPEEKL Trigger: CAGCTTTTCTTCTGGAGACCACCTGGGCCAGGGATG...TCTCTTGAAGATCAGCTTTTCTTCTGGAGACCACCTGGGCCAGGGATGGGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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3UTR-3UTR GCA 90 bp | CAACCCAACCCTAAAGGGGTTGTCACCCACAGCTTGAGGACTGCTGTGTTAAAGAATTCTGCTTGCCTCTaGCTCCTGTGTGCTAGGACT | + |
Preference number: 2 (lower is better) Translates to: QPNPKGVVTHSLRTAVLKNSACL*LLCART Trigger: AGTCCTAGCACACAGGAGGCAGAGGCAAGCAGAATT...CTTTAACACAGCAGTCCTCAAGCTGTGGGTGACAACCCCTTTAGGGTTGGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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3UTR-3UTR GCA 90 bp | CAGCTCCTGTTTGGTCGGCTCCATTTTGAGAGCTTTTGCAATCTAGGCATGAATCATGGATGGGCCCTATaGTTATGTGGCCCCTGGGGA | + |
Preference number: 2 (lower is better) Translates to: QLLFGRLHFESFCNLGMNHGWAL*LCGPWG Trigger: TCCCCAGGGGCCACATAAGCATAGGGCCCATCCATG...ATTCATGCCTAGATTGCAAAAGCTCTCAAAATGGAGCCGACCAAACAGGAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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3UTR-3UTR TCA 90 bp | TCAGAAATTCTGCTTGCCTCTGCCTCCTGTGTGCTAGGACTAAAGGCATGTGCCTCTTTAGTATGTCAGTaGCACCAGGAAACCCATCCC | + |
Preference number: 2 (lower is better) Translates to: SEILLASASCVLGLKACASLVCQ*HQETHP Trigger: GGGATGGGTTTCCTGGTGTCACTGACATACTAAAGA...GGCACATGCCTTTAGTCCTAGCACACAGGAGGCAGAGGCAAGCAGAATTTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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3UTR-3UTR GCA 90 bp | CAGCTCCTGTTTGGTCGGCTCCATTTTGAGAGCTTTTGCAATCTAGGCATGAATCACTGCCCCATGAAATaGGAGCAACTGGAGAATGTC | + |
Preference number: 2 (lower is better) Translates to: QLLFGRLHFESFCNLGMNHCPMK*EQLENV Trigger: GACATTCTCCAGTTGCTCGCATTTCATGGGGCAGTG...ATTCATGCCTAGATTGCAAAAGCTCTCAAAATGGAGCCGACCAAACAGGAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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3UTR-3UTR GCA 90 bp | CAGCTGTGTAGTACTGAGCACAAAGAACATCCAACCACCAGGAAATCCCAGCAAGCATCTGAGGGGGCATaGGGAGCTACTTTTTGTTTT | + |
Preference number: 2 (lower is better) Translates to: QLCSTEHKEHPTTRKSQQASEGA*GATFCF Trigger: AAAACAAAAAGTAGCTCCGCATGCCCCCTCAGATGC...TTGCTGGGATTTCCTGGTGGTTGGATGTTCTTTGTGCTCAGTACTACACAGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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3UTR-3UTR CCA 90 bp | CAGCTCCTGTTTGGTCGGCTCCATTTTGAGAGCTTTTGCAATCTAGGCATGAATGGCCCTATGCTTATGTaGCCCCTGGGGATAAATACT | + |
Preference number: 2 (lower is better) Translates to: QLLFGRLHFESFCNLGMNGPMLM*PLGINT Trigger: AGTATTTATCCCCAGGGGCCACATAAGCATAGGGCC...ATTCATGCCTAGATTGCAAAAGCTCTCAAAATGGAGCCGACCAAACAGGAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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3UTR CAA 90 bp | TCACTGCCCCATGAAATGCGAGCAACTGGAGAATGTCAGCTGCCATaGCTGTACCTGAGTCTCACTGTACACAAAAGAAGGATAAGAACT | + |
Preference number: 2 (lower is better) Translates to: SLPHEMRATGECQLP*LYLSLTVHKRRIRT Trigger: AGTTCTTATCCTTCTTTTGTGTACAGTGAGACTCAGGTACAGCAATGGCAGCTGACATTCTCCAGTTGCTCGCATTTCATGGGGCAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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3UTR-3UTR TCA 90 bp | AAAGCTGATCTTCAAGAGAGTTTTCTCCTCAGCTTTCATAGTGCTGACTCTGGGCTCCAGAAGAAAAGCTaGTCTTCAAGAGAGTTTTCT | + |
Preference number: 2 (lower is better) Translates to: KADLQESFLLSFHSADSGLQKKS*SSREFS Trigger: AGAAAACTCTCTTGAAGATCAGCTTTTCTTCTGGAG...CCCAGAGTCAGCACTATGAAAGCTGAGGAGAAAACTCTCTTGAAGATCAGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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3UTR-3UTR CCA 90 bp | GCCAAATCATGGCAAGGATTCTTAAAAGTGACTGAGGTGTTTATTCAAGTCCACGCATTGCTCTCGTTATaGACATCTTTATTACTCCAT | + |
Preference number: 2 (lower is better) Translates to: AKSWQGFLKVTEVFIQVHALLSL*TSLLLH Trigger: ATGGAGTAATAAAGATGTCCATAACGAGAGCAATGC...GTGGACTTGAATAAACACCTCAGTCACTTTTAAGAATCCTTGCCATGATTTGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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3UTR TCA 72 bp | GTGGAGGGGACGGAGGGGCCACTGGGAGTTTATCACTaGGGAACAAGTTCCCTTAGGGAGGCCAGAGCAGCG | + |
Preference number: 3 (lower is better) Translates to: VEGTEGPLGVYH*GTSSLREARAA Trigger: CGCTGCTCTGGCCTCCCTAAGGGAACTTGTTCCTCAGTGATAAACTCCCAGTGGCCCCTCCGTCCCCTCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234255.2 |
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3UTR CCA 72 bp | CGTTCAGCAAGACTAGCTTGTCAGTGGACCCAGGGTTaGGAGGAGCTCAAGGGATCCTCCTGCCTCTGTGTC | + |
Preference number: 3 (lower is better) Translates to: RSARLACQWTQG*EELKGSSCLCV Trigger: GACACAGAGGCAGGAGGATCCCTTGAGCTCCTCCCAACCCTGGGTCCACTGACAAGCTAGTCTTGCTGAACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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3UTR CCA 72 bp | GGAACTACAGCCTCTGTGAGATGTCTGCTAGTGCAGTaGCTCTCGCCCTCCCTAACGCTGCGGCCCTTCAAT | + |
Preference number: 3 (lower is better) Translates to: GTTASVRCLLVQ*LSPSLTLRPFN Trigger: ATTGAAGGGCCGCAGCGTTAGGGAGGGCGAGAGCCACTGCACTAGCAGACATCTCACAGAGGCTGTAGTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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3UTR-3UTR CAA 90 bp | CTGTGGACTTATCTTCTCAGCTCCTGTTTGGTCGGCTCCATTTTGAGAGCTTTTTCAGTGGACCCAGGGTaGGGAGGAGCTCAAGGGATC | + |
Preference number: 3 (lower is better) Translates to: LWTYLLSSCLVGSILRAFSVDPG*GGAQGI Trigger: GATCCCTTGAGCTCCTCCCAACCCTGGGTCCACTGA...AAAAGCTCTCAAAATGGAGCCGACCAAACAGGAGCTGAGAAGATAAGTCCACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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3UTR GCA 72 bp | ATTTTCACAGCAGAACAACTCCTAAAATATAGGTGCTaGGTGGCTAGGACTGGCAGCAGGGACATGCTGTGG | + |
Preference number: 3 (lower is better) Translates to: IFTAEQLLKYRC*VARTGSRDMLW Trigger: CCACAGCATGTCCCTGCTGCCAGTCCTAGCCACGCAGCACCTATATTTTAGGAGTTGTTCTGCTGTGAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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3UTR-3UTR CAA 90 bp | CAACCCAACCCTAAAGGGGTTGTCACCCACAGCTTGAGGACTGCTGTGTTAAAGTCCAGCCTAGAAGGTTaGTGCCATAATCACTATAGG | + |
Preference number: 3 (lower is better) Translates to: QPNPKGVVTHSLRTAVLKSSLEG*CHNHYR Trigger: CCTATAGTGATTATGGCACAAACCTTCTAGGCTGGA...CTTTAACACAGCAGTCCTCAAGCTGTGGGTGACAACCCCTTTAGGGTTGGGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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3UTR-3UTR CAA 90 bp | CTCGAAGGAATCAAATGCATCCTTGAAGTTGAGTTCAATCATGCTGCACCAGCCTCATCCAAGCCCCCTTaGTTGTCACTGCCGTCCAAA | + |
Preference number: 3 (lower is better) Translates to: LEGIKCILEVEFNHAAPASSKPP*LSLPSK Trigger: TTTGGACGGCAGTGACAACAAAGGGGGCTTGGATGA...GGCTGGTGCAGCATGATTGAACTCAACTTCAAGGATGCATTTGATTCCTTCGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234974.2 |
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3UTR GCA 72 bp | GAACAAGGTCACTTAACCCTCTCCCAGGTCGGGCATTaGTCTCGTTATGGACATCTTTATTACTCCATAGCT | + |
Preference number: 3 (lower is better) Translates to: EQGHLTLSQVGH*SRYGHLYYSIA Trigger: AGCTATGGAGTAATAAAGATGTCCATAACGAGAGCAATGCCCGACCTGGGAGAGGGTTAAGTGACCTTGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234966.2 |
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3UTR GCA 72 bp | AAGGCATGTGCCACCCCATCCAGCCTAGAAGGTTTGTaGCATAATCACTATAGGAGTATTTCCAGTATAAAG | + |
Preference number: 3 (lower is better) Translates to: KACATPSSLEGL*HNHYRSISSIK Trigger: CTTTATACTGGAAATACTCCTATAGTGATTATGGCACAAACCTTCTAGGCTGGATGGGGTGGCACATGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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3UTR GCA 72 bp | CAGCTCCTGTTTGGTCGGCTCCATTTTGAGAGCTTTTaGAATCTAGGCATGAATGTGTGTAGAAGTGTATGT | + |
Preference number: 3 (lower is better) Translates to: QLLFGRLHFESF*NLGMNVCRSVC Trigger: ACATACACTTCTACACACATTCATGCCTAGATTGCAAAAGCTCTCAAAATGGAGCCGACCAAACAGGAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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3UTR CCA 72 bp | TTCAGCATCAAAAAGTATCAGGTACAAACCACACTCTaGAACTACAGCCTCTGTGAGATGTCTGCTAGTGCA | + |
Preference number: 3 (lower is better) Translates to: FSIKKYQVQTTL*NYSLCEMSASA Trigger: TGCACTAGCAGACATCTCACAGAGGCTGTAGTTCCAGAGTGTGGTTTGTACCTGATACTTTTTGATGCTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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CDS-3UTR CCA 90 bp | CTCCTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGGCCAGAGCAGCGTaGATGCGGACGTGCAATCTG | + |
Preference number: 4 (lower is better) Translates to: LLSFHSADSGWRGRRGHWEARAA*MRTCNL Trigger: CAGATTGCACGTCCGCATCCACGCTGCTCTGGCCTC...CCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCTGAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234966.2 |
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CDS-3UTR CCA 90 bp | CTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGGAAGTCGATCGACCATaGAGGGGGTGGATTTCCGGG | + |
Preference number: 4 (lower is better) Translates to: LSFHSADSGWRGRRGHWEEVDRP*RGWISG Trigger: CCCGGAAATCCACCCCCTCCATGGTCGATCGACTTC...CTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCTGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CCA 90 bp | GCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGTTTACGACCATGGAGGGGGTaGATTTCCGGGCATCAACGT | + |
Preference number: 4 (lower is better) Translates to: AFIVLTLGGGDGGATGSLRPWRG*ISGHQR Trigger: ACGTTGATGCCCGGAAATCCACCCCCTCCATGGTCG...TAAACTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CCA 90 bp | CTCCTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGACACAGCGCTCTGGTTaGGGTTTGCTTCCGAAATCG | + |
Preference number: 4 (lower is better) Translates to: LLSFHSADSGWRGRRGHWTQRSG*GLLPKS Trigger: CGATTTCGGAAGCAAACCCCAACCAGAGCGCTGTGT...CCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCTGAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR TCA 90 bp | CTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGTGGCGTTCAAAAAGCTaGCGAAGCTGGCTCCAAAAC | + |
Preference number: 4 (lower is better) Translates to: LSFHSADSGWRGRRGHWEWRSKS*RSWLQN Trigger: GTTTTGGAGCCAGCTTCGTCAGCTTTTTGAACGCCA...CTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CCA 90 bp | GAGAGTTTTCTCCTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGAGGCCAGAGCAGCGTaGATGCGGACGTGCAATCTG | + |
Preference number: 4 (lower is better) Translates to: ESFLLSFHSADSGWRGRREARAA*MRTCNL Trigger: CAGATTGCACGTCCGCATCCACGCTGCTCTGGCCTC...CCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCTGAGGAGAAAACTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234966.2 |
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3UTR CAA 72 bp | CCGTTCAGCAAGACTAGCTTGTCAGTGGACCCAGGGTaGGGAGGAGCTCAAGGGATCCTCCTGCCTCTGTGT | + |
Preference number: 4 (lower is better) Translates to: PFSKTSLSVDPG*GGAQGILLPLC Trigger: ACACAGAGGCAGGAGGATCCCTTGAGCTCCTCCCAACCCTGGGTCCACTGACAAGCTAGTCTTGCTGAACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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CDS-3UTR TCA 90 bp | GCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGTTTATCACTGAGGAATGGCGTTCAAAAAGCTaGCGAAGCTGGCTCCAAAAC | + |
Preference number: 4 (lower is better) Translates to: ADSGWRGRRGHWEFITEEWRSKS*RSWLQN Trigger: GTTTTGGAGCCAGCTTCGTCAGCTTTTTGAACGCCA...TTCCTCAGTGATAAACTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000234255.2 |
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CDS-3UTR TCA 90 bp | CTCCTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGCTCGCTGGAAGAACTaGAGAGCATCTTGTGAGTTT | + |
Preference number: 4 (lower is better) Translates to: LLSFHSADSGWRGRRGHWARWKN*RASCEF Trigger: AAACTCACAAGATGCTCTTCAGTTCTTCCAGCGAGC...CCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCTGAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR GCA 90 bp | AGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGTTTTCATACAGACAGACGTaGTGGATCTCCCTCTGGTCC | + |
Preference number: 4 (lower is better) Translates to: SFHSADSGWRGRRGHWEFSYRQT*WISLWS Trigger: GGACCAGAGGGAGATCCAGCACGTCTGTCTGTATGA...AAACTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR GCA 90 bp | GCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGTTTATCATACAGACAGACGTaGTGGATCTCCCTCTGGTCC | + |
Preference number: 4 (lower is better) Translates to: AFIVLTLGGGDGGATGSLSYRQT*WISLWS Trigger: GGACCAGAGGGAGATCCAGCACGTCTGTCTGTATGA...TAAACTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR GCA 90 bp | GTCAGTGACACCAGGAAACCCATCCCTGGCCCAGGTGGTCTCCAGAAGAAAAGCGCTCTGGTTGGGGTTTaGTTCCGAAATCGCTCAGCC | + |
Preference number: 4 (lower is better) Translates to: VSDTRKPIPGPGGLQKKSALVGV*FRNRSA Trigger: GGCTGAGCGATTTCGGAAGCAAACCCCAACCAGAGC...GCTTTTCTTCTGGAGACCACCTGGGCCAGGGATGGGTTTCCTGGTGTCACTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR GCA 90 bp | CTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGGAAGAAGTAGAGTTCTaGCTCTTCCCACAGTCTCTG | + |
Preference number: 4 (lower is better) Translates to: LSFHSADSGWRGRRGHWEEEVEF*LFPQSL Trigger: CAGAGACTGTGGGAAGAGGCAGAACTCTACTTCTTC...CTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234966.2 |
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CDS-3UTR GCA 90 bp | AGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGTTTCCAGAGCAGCGTGGATaGGGACGTGCAATCTGTTTT | + |
Preference number: 4 (lower is better) Translates to: SFHSADSGWRGRRGHWEFPEQRG*GRAICF Trigger: AAAACAGATTGCACGTCCGCATCCACGCTGCTCTGG...AAACTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234966.2 |
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CDS-3UTR CCA 90 bp | CTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGCCTTCGGCCACAACGTaGTTATCATTTGCAGCATCA | + |
Preference number: 4 (lower is better) Translates to: LSFHSADSGWRGRRGHWEPSATT*LSFAAS Trigger: TGATGCTGCAAATGATAACCACGTTGTGGCCGAAGG...CTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CCA 90 bp | CTCCTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGCCTTCGGCCACAACGTaGTTATCATTTGCAGCATCA | + |
Preference number: 4 (lower is better) Translates to: LLSFHSADSGWRGRRGHWPSATT*LSFAAS Trigger: TGATGCTGCAAATGATAACCACGTTGTGGCCGAAGG...CCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCTGAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CCA 90 bp | GACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGTTTATCACTGAGGAACAAACACAGCGCTCTGGTTaGGGTTTGCTTCCGAAATCG | + |
Preference number: 4 (lower is better) Translates to: DSGWRGRRGHWEFITEEQTQRSG*GLLPKS Trigger: CGATTTCGGAAGCAAACCCCAACCAGAGCGCTGTGT...TTGTTCCTCAGTGATAAACTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234255.2 |
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CDS-3UTR TCA 90 bp | AGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGTTTTCACCAGTGGCTCCCTaGCAAACTGCAGTCAGATAT | + |
Preference number: 4 (lower is better) Translates to: SFHSADSGWRGRRGHWEFSPVAP*QTAVRY Trigger: ATATCTGACTGCAGTTTGTCAGGGAGCCACTGGTGA...AAACTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR TCA 90 bp | GCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGTTTATCACCAGTGGCTCCCTaGCAAACTGCAGTCAGATAT | + |
Preference number: 4 (lower is better) Translates to: AFIVLTLGGGDGGATGSLSPVAP*QTAVRY Trigger: ATATCTGACTGCAGTTTGTCAGGGAGCCACTGGTGA...TAAACTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR TCA 90 bp | CTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGAAATCCTCCTTTGCCTaGAGAAGTAGAGTTCTGCCT | + |
Preference number: 4 (lower is better) Translates to: LSFHSADSGWRGRRGHWEKSSFA*RSRVLP Trigger: AGGCAGAACTCTACTTCTTCAGGCAAAGGAGGATTT...CTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR GCA 90 bp | GCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGTTTAGCGTGGATGCGGACGTaGAATCTGTTTTCAAAGTCG | + |
Preference number: 4 (lower is better) Translates to: AFIVLTLGGGDGGATGSLAWMRT*NLFSKS Trigger: CGACTTTGAAAACAGATTGCACGTCCGCATCCACGC...TAAACTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234966.2 |
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CDS-3UTR GCA 90 bp | AGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGTTTGCGTGGATGCGGACGTaGAATCTGTTTTCAAAGTCG | + |
Preference number: 4 (lower is better) Translates to: SFHSADSGWRGRRGHWEFAWMRT*NLFSKS Trigger: CGACTTTGAAAACAGATTGCACGTCCGCATCCACGC...AAACTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234966.2 |
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CDS-3UTR CCA 90 bp | TTTATCACTGAGGAACAAGTTCCCTTAGGGAGGCCAGAGCAGCGTGGATGCGGACGACCATGGAGGGGGTaGATTTCCGGGCATCAACGT | + |
Preference number: 4 (lower is better) Translates to: FITEEQVPLGRPEQRGCGRPWRG*ISGHQR Trigger: ACGTTGATGCCCGGAAATCCACCCCCTCCATGGTCG...TCCGCATCCACGCTGCTCTGGCCTCCCTAAGGGAACTTGTTCCTCAGTGATAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234255.2 |
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CDS-3UTR CCA 90 bp | CCAGGAAACCCATCCCTGGCCCAGGTGGTCTCCAGAAGAAAAGCTGATCTTCAAGAAGTCGATCGACCATaGAGGGGGTGGATTTCCGGG | + |
Preference number: 4 (lower is better) Translates to: PGNPSLAQVVSRRKADLQEVDRP*RGWISG Trigger: CCCGGAAATCCACCCCCTCCATGGTCGATCGACTTC...TTGAAGATCAGCTTTTCTTCTGGAGACCACCTGGGCCAGGGATGGGTTTCCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CCA 90 bp | GTCAGTGACACCAGGAAACCCATCCCTGGCCCAGGTGGTCTCCAGAAGAAAAGCACACAGCGCTCTGGTTaGGGTTTGCTTCCGAAATCG | + |
Preference number: 4 (lower is better) Translates to: VSDTRKPIPGPGGLQKKSTQRSG*GLLPKS Trigger: CGATTTCGGAAGCAAACCCCAACCAGAGCGCTGTGT...GCTTTTCTTCTGGAGACCACCTGGGCCAGGGATGGGTTTCCTGGTGTCACTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR TCA 90 bp | GTCAGTGACACCAGGAAACCCATCCCTGGCCCAGGTGGTCTCCAGAAGAAAAGCGTTCCTGAAGGGCGTTaGTGTCCACATAGCACTTAC | + |
Preference number: 4 (lower is better) Translates to: VSDTRKPIPGPGGLQKKSVPEGR*CPHSTY Trigger: GTAAGTGCTATGTGGACATCAACGCCCTTCAGGAAC...GCTTTTCTTCTGGAGACCACCTGGGCCAGGGATGGGTTTCCTGGTGTCACTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR TCA 90 bp | GCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGTTTATCACTGAGGAAAAGTCAAGGCACTGTTaGTTTGACACTCTAACCGCT | + |
Preference number: 4 (lower is better) Translates to: ADSGWRGRRGHWEFITEEKSRHC*FDTLTA Trigger: AGCGGTTAGAGTGTCAAATCAACAGTGCCTTGACTT...TTCCTCAGTGATAAACTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000234255.2 |
||
CDS-3UTR GCA 90 bp | ATCTTTAGTATGTCAGTGACACCAGGAAACCCATCCCTGGCCCAGGTGGTCTCCGCTCTGGTTGGGGTTTaGTTCCGAAATCGCTCAGCC | + |
Preference number: 4 (lower is better) Translates to: IFSMSVTPGNPSLAQVVSALVGV*FRNRSA Trigger: GGCTGAGCGATTTCGGAAGCAAACCCCAACCAGAGC...GGAGACCACCTGGGCCAGGGATGGGTTTCCTGGTGTCACTGACATACTAAAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR GCA 90 bp | CTCCTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGCACCAAGGAGCAAATaGTTTAATCCAACGACAGAT | + |
Preference number: 4 (lower is better) Translates to: LLSFHSADSGWRGRRGHWAPRSK*FNPTTD Trigger: ATCTGTCGTTGGATTAAAGCATTTGCTCCTTGGTGC...CCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCTGAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CCA 90 bp | AACCCATCCCTGGCCCAGGTGGTCTCCAGAAGAAAAGCTGATCTTCAAGAGAGTGAAGTCGATCGACCATaGAGGGGGTGGATTTCCGGG | + |
Preference number: 4 (lower is better) Translates to: NPSLAQVVSRRKADLQESEVDRP*RGWISG Trigger: CCCGGAAATCCACCCCCTCCATGGTCGATCGACTTC...ACTCTCTTGAAGATCAGCTTTTCTTCTGGAGACCACCTGGGCCAGGGATGGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CCA 90 bp | AGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGTTTGGTTTGGGGGCACCATaGATATGCAAAGGTGGAAAA | + |
Preference number: 4 (lower is better) Translates to: SFHSADSGWRGRRGHWEFGLGAP*ICKGGK Trigger: TTTTCCACCTTTGCATATCCATGGTGCCCCCAAACC...AAACTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CCA 90 bp | TTCAAGAGAGTTTTCTCCTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGAGGCCAGAGCAGCGTaGATGCGGACGTGCAATCTG | + |
Preference number: 4 (lower is better) Translates to: FKRVFSSAFIVLTLGGGDEARAA*MRTCNL Trigger: CAGATTGCACGTCCGCATCCACGCTGCTCTGGCCTC...GTCCCCTCCACCCAGAGTCAGCACTATGAAAGCTGAGGAGAAAACTCTCTTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234966.2 |
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CDS-3UTR TCA 90 bp | AGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGTTTAAATCCTCCTTTGCCTaGAGAAGTAGAGTTCTGCCT | + |
Preference number: 4 (lower is better) Translates to: SFHSADSGWRGRRGHWEFKSSFA*RSRVLP Trigger: AGGCAGAACTCTACTTCTTCAGGCAAAGGAGGATTT...AAACTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR GCA 90 bp | AGTATGTCAGTGACACCAGGAAACCCATCCCTGGCCCAGGTGGTCTCCAGAAGAGGGGCACCATGGATATaGAAAGGTGGAAAAGGCCAT | + |
Preference number: 4 (lower is better) Translates to: SMSVTPGNPSLAQVVSRRGAPWI*KGGKGH Trigger: ATGGCCTTTTCCACCTTTGCATATCCATGGTGCCCC...TCTTCTGGAGACCACCTGGGCCAGGGATGGGTTTCCTGGTGTCACTGACATACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR GCA 90 bp | ATCTTTAGTATGTCAGTGACACCAGGAAACCCATCCCTGGCCCAGGTGGTCTCCTCATACAGACAGACGTaGTGGATCTCCCTCTGGTCC | + |
Preference number: 4 (lower is better) Translates to: IFSMSVTPGNPSLAQVVSSYRQT*WISLWS Trigger: GGACCAGAGGGAGATCCAGCACGTCTGTCTGTATGA...GGAGACCACCTGGGCCAGGGATGGGTTTCCTGGTGTCACTGACATACTAAAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR GCA 90 bp | GAAACCCATCCCTGGCCCAGGTGGTCTCCAGAAGAAAAGCTGATCTTCAAGAGAGCTCTGGTTGGGGTTTaGTTCCGAAATCGCTCAGCC | + |
Preference number: 4 (lower is better) Translates to: ETHPWPRWSPEEKLIFKRALVGV*FRNRSA Trigger: GGCTGAGCGATTTCGGAAGCAAACCCCAACCAGAGC...TCTCTTGAAGATCAGCTTTTCTTCTGGAGACCACCTGGGCCAGGGATGGGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CCA 90 bp | TTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGTTTATCAGGTTTGGGGGCACCATaGATATGCAAAGGTGGAAAA | + |
Preference number: 4 (lower is better) Translates to: FIVLTLGGGDGGATGSLSGLGAP*ICKGGK Trigger: TTTTCCACCTTTGCATATCCATGGTGCCCCCAAACC...TGATAAACTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000234255.2 |
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CDS-3UTR CCA 90 bp | TGGGAGTTTATCACTGAGGAACAAGTTCCCTTAGGGAGGCCAGAGCAGCGTGGAAGCTCCAGAGCAGTGTaGAAGGAAGTCAAGGCACTG | + |
Preference number: 4 (lower is better) Translates to: WEFITEEQVPLGRPEQRGSSRAV*KEVKAL Trigger: CAGTGCCTTGACTTCCTTCCACACTGCTCTGGAGCT...TCCACGCTGCTCTGGCCTCCCTAAGGGAACTTGTTCCTCAGTGATAAACTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234255.2 |
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CDS-3UTR CCA 90 bp | TTTAGTATGTCAGTGACACCAGGAAACCCATCCCTGGCCCAGGTGGTCTCCAGAAGCTCCAGAGCAGTGTaGAAGGAAGTCAAGGCACTG | + |
Preference number: 4 (lower is better) Translates to: FSMSVTPGNPSLAQVVSRSSRAV*KEVKAL Trigger: CAGTGCCTTGACTTCCTTCCACACTGCTCTGGAGCT...TCTGGAGACCACCTGGGCCAGGGATGGGTTTCCTGGTGTCACTGACATACTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR TCA 90 bp | ATCTTTAGTATGTCAGTGACACCAGGAAACCCATCCCTGGCCCAGGTGGTCTCCTCACCAGTGGCTCCCTaGCAAACTGCAGTCAGATAT | + |
Preference number: 4 (lower is better) Translates to: IFSMSVTPGNPSLAQVVSSPVAP*QTAVRY Trigger: ATATCTGACTGCAGTTTGTCAGGGAGCCACTGGTGA...GGAGACCACCTGGGCCAGGGATGGGTTTCCTGGTGTCACTGACATACTAAAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR TCA 90 bp | TTTATCACTGAGGAACAAGTTCCCTTAGGGAGGCCAGAGCAGCGTGGATGCGGATCACCAGTGGCTCCCTaGCAAACTGCAGTCAGATAT | + |
Preference number: 4 (lower is better) Translates to: FITEEQVPLGRPEQRGCGSPVAP*QTAVRY Trigger: ATATCTGACTGCAGTTTGTCAGGGAGCCACTGGTGA...TCCGCATCCACGCTGCTCTGGCCTCCCTAAGGGAACTTGTTCCTCAGTGATAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234255.2 |
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CDS-3UTR GCA 90 bp | TGGGAGTTTATCACTGAGGAACAAGTTCCCTTAGGGAGGCCAGAGCAGCGTGGAGGGGCACCATGGATATaGAAAGGTGGAAAAGGCCAT | + |
Preference number: 4 (lower is better) Translates to: WEFITEEQVPLGRPEQRGGAPWI*KGGKGH Trigger: ATGGCCTTTTCCACCTTTGCATATCCATGGTGCCCC...TCCACGCTGCTCTGGCCTCCCTAAGGGAACTTGTTCCTCAGTGATAAACTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234255.2 |
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CDS-3UTR GCA 90 bp | AACCCATCCCTGGCCCAGGTGGTCTCCAGAAGAAAAGCTGATCTTCAAGAGAGTTCATACAGACAGACGTaGTGGATCTCCCTCTGGTCC | + |
Preference number: 4 (lower is better) Translates to: NPSLAQVVSRRKADLQESSYRQT*WISLWS Trigger: GGACCAGAGGGAGATCCAGCACGTCTGTCTGTATGA...ACTCTCTTGAAGATCAGCTTTTCTTCTGGAGACCACCTGGGCCAGGGATGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CCA 90 bp | ATCTTCAAGAGAGTTTTCTCCTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGCGACCATGGAGGGGGTaGATTTCCGGGCATCAACGT | + |
Preference number: 4 (lower is better) Translates to: IFKRVFSSAFIVLTLGGGRPWRG*ISGHQR Trigger: ACGTTGATGCCCGGAAATCCACCCCCTCCATGGTCG...CCCTCCACCCAGAGTCAGCACTATGAAAGCTGAGGAGAAAACTCTCTTGAAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CCA 90 bp | AGTATGTCAGTGACACCAGGAAACCCATCCCTGGCCCAGGTGGTCTCCAGAAGACCTTCGGCCACAACGTaGTTATCATTTGCAGCATCA | + |
Preference number: 4 (lower is better) Translates to: SMSVTPGNPSLAQVVSRRPSATT*LSFAAS Trigger: TGATGCTGCAAATGATAACCACGTTGTGGCCGAAGG...TCTTCTGGAGACCACCTGGGCCAGGGATGGGTTTCCTGGTGTCACTGACATACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR TCA 90 bp | AGCCAGCTCCAGAGCAGTGTGGAAGGAAGTCAAGGCACTGTTGATTTGACACTCTGGCGTTCAAAAAGCTaGCGAAGCTGGCTCCAAAAC | + |
Preference number: 4 (lower is better) Translates to: SQLQSSVEGSQGTVDLTLWRSKS*RSWLQN Trigger: GTTTTGGAGCCAGCTTCGTCAGCTTTTTGAACGCCA...GAGTGTCAAATCAACAGTGCCTTGACTTCCTTCCACACTGCTCTGGAGCTGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234974.2 |
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CDS-3UTR TCA 90 bp | GAGAGTTTTCTCCTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGAAGTCAAGGCACTGTTaGTTTGACACTCTAACCGCT | + |
Preference number: 4 (lower is better) Translates to: ESFLLSFHSADSGWRGRRKSRHC*FDTLTA Trigger: AGCGGTTAGAGTGTCAAATCAACAGTGCCTTGACTT...CCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCTGAGGAGAAAACTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR TCA 90 bp | TTTAGTATGTCAGTGACACCAGGAAACCCATCCCTGGCCCAGGTGGTCTCCAGAGCTCGCTGGAAGAACTaGAGAGCATCTTGTGAGTTT | + |
Preference number: 4 (lower is better) Translates to: FSMSVTPGNPSLAQVVSRARWKN*RASCEF Trigger: AAACTCACAAGATGCTCTTCAGTTCTTCCAGCGAGC...TCTGGAGACCACCTGGGCCAGGGATGGGTTTCCTGGTGTCACTGACATACTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR GCA 90 bp | CAACCCAACCCTAAAGGGGTTGTCACCCACAGCTTGAGGACTGCTGTGTTAAAGGGGGCACCATGGATATaGAAAGGTGGAAAAGGCCAT | + |
Preference number: 4 (lower is better) Translates to: QPNPKGVVTHSLRTAVLKGAPWI*KGGKGH Trigger: ATGGCCTTTTCCACCTTTGCATATCCATGGTGCCCC...CTTTAACACAGCAGTCCTCAAGCTGTGGGTGACAACCCCTTTAGGGTTGGGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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CDS-3UTR CCA 90 bp | CTGATCTTCAAGAGAGTTTTCTCCTCAGCTTTCATAGTGCTGACTCTGGGTGGACGACCATGGAGGGGGTaGATTTCCGGGCATCAACGT | + |
Preference number: 4 (lower is better) Translates to: LIFKRVFSSAFIVLTLGGRPWRG*ISGHQR Trigger: ACGTTGATGCCCGGAAATCCACCCCCTCCATGGTCG...TCCACCCAGAGTCAGCACTATGAAAGCTGAGGAGAAAACTCTCTTGAAGATCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CCA 90 bp | CAGCTCCTGTTTGGTCGGCTCCATTTTGAGAGCTTTTGCAATCTAGGCATGAATGAAGTCGATCGACCATaGAGGGGGTGGATTTCCGGG | + |
Preference number: 4 (lower is better) Translates to: QLLFGRLHFESFCNLGMNEVDRP*RGWISG Trigger: CCCGGAAATCCACCCCCTCCATGGTCGATCGACTTC...ATTCATGCCTAGATTGCAAAAGCTCTCAAAATGGAGCCGACCAAACAGGAGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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CDS-3UTR CCA 90 bp | TTTAGTATGTCAGTGACACCAGGAAACCCATCCCTGGCCCAGGTGGTCTCCAGACCTTCGGCCACAACGTaGTTATCATTTGCAGCATCA | + |
Preference number: 4 (lower is better) Translates to: FSMSVTPGNPSLAQVVSRPSATT*LSFAAS Trigger: TGATGCTGCAAATGATAACCACGTTGTGGCCGAAGG...TCTGGAGACCACCTGGGCCAGGGATGGGTTTCCTGGTGTCACTGACATACTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR TCA 90 bp | TTCAAGAGAGTTTTCTCCTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGTTCCTGAAGGGCGTTaGTGTCCACATAGCACTTAC | + |
Preference number: 4 (lower is better) Translates to: FKRVFSSAFIVLTLGGGDVPEGR*CPHSTY Trigger: GTAAGTGCTATGTGGACATCAACGCCCTTCAGGAAC...GTCCCCTCCACCCAGAGTCAGCACTATGAAAGCTGAGGAGAAAACTCTCTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR GCA 90 bp | TTCAAGAGAGTTTTCTCCTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGGGCACCATGGATATaGAAAGGTGGAAAAGGCCAT | + |
Preference number: 4 (lower is better) Translates to: FKRVFSSAFIVLTLGGGDGAPWI*KGGKGH Trigger: ATGGCCTTTTCCACCTTTGCATATCCATGGTGCCCC...GTCCCCTCCACCCAGAGTCAGCACTATGAAAGCTGAGGAGAAAACTCTCTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR GCA 90 bp | CCATCCCTGGCCCAGGTGGTCTCCAGAAGAAAAGCTGATCTTCAAGAGAGTTTTGCGTGGATGCGGACGTaGAATCTGTTTTCAAAGTCG | + |
Preference number: 4 (lower is better) Translates to: PSLAQVVSRRKADLQESFAWMRT*NLFSKS Trigger: CGACTTTGAAAACAGATTGCACGTCCGCATCCACGC...AAAACTCTCTTGAAGATCAGCTTTTCTTCTGGAGACCACCTGGGCCAGGGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234966.2 |
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CDS-3UTR TCA 90 bp | AACCCATCCCTGGCCCAGGTGGTCTCCAGAAGAAAAGCTGATCTTCAAGAGAGTAAATCCTCCTTTGCCTaGAGAAGTAGAGTTCTGCCT | + |
Preference number: 4 (lower is better) Translates to: NPSLAQVVSRRKADLQESKSSFA*RSRVLP Trigger: AGGCAGAACTCTACTTCTTCAGGCAAAGGAGGATTT...ACTCTCTTGAAGATCAGCTTTTCTTCTGGAGACCACCTGGGCCAGGGATGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR GCA 90 bp | CAGGTCGGGCATTGCTCTCGTTATGGACATCTTTATTACTCCATAGCTACATGTGCTCTGGTTGGGGTTTaGTTCCGAAATCGCTCAGCC | + |
Preference number: 4 (lower is better) Translates to: QVGHCSRYGHLYYSIATCALVGV*FRNRSA Trigger: GGCTGAGCGATTTCGGAAGCAAACCCCAACCAGAGC...ACATGTAGCTATGGAGTAATAAAGATGTCCATAACGAGAGCAATGCCCGACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234966.2 |
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CDS-3UTR GCA 90 bp | CCAGGAAACCCATCCCTGGCCCAGGTGGTCTCCAGAAGAAAAGCTGATCTTCAAGCACCAAGGAGCAAATaGTTTAATCCAACGACAGAT | + |
Preference number: 4 (lower is better) Translates to: PGNPSLAQVVSRRKADLQAPRSK*FNPTTD Trigger: ATCTGTCGTTGGATTAAAGCATTTGCTCCTTGGTGC...TTGAAGATCAGCTTTTCTTCTGGAGACCACCTGGGCCAGGGATGGGTTTCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CCA 90 bp | GGAATCAAATGCATCCTTGAAGTTGAGTTCAATCATGCTGCACCAGCCAATTTCCGACCATGGAGGGGGTaGATTTCCGGGCATCAACGT | + |
Preference number: 4 (lower is better) Translates to: GIKCILEVEFNHAAPANFRPWRG*ISGHQR Trigger: ACGTTGATGCCCGGAAATCCACCCCCTCCATGGTCG...GAAATTGGCTGGTGCAGCATGATTGAACTCAACTTCAAGGATGCATTTGATTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234974.2 |
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CDS-3UTR CCA 90 bp | GGAATCAAATGCATCCTTGAAGTTGAGTTCAATCATGCTGCACCAGCCAATTTCGAAGTCGATCGACCATaGAGGGGGTGGATTTCCGGG | + |
Preference number: 4 (lower is better) Translates to: GIKCILEVEFNHAAPANFEVDRP*RGWISG Trigger: CCCGGAAATCCACCCCCTCCATGGTCGATCGACTTC...GAAATTGGCTGGTGCAGCATGATTGAACTCAACTTCAAGGATGCATTTGATTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234974.2 |
||
CDS-3UTR CCA 90 bp | TTCAAGAGAGTTTTCTCCTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGTTTGGGGGCACCATaGATATGCAAAGGTGGAAAA | + |
Preference number: 4 (lower is better) Translates to: FKRVFSSAFIVLTLGGGDGLGAP*ICKGGK Trigger: TTTTCCACCTTTGCATATCCATGGTGCCCCCAAACC...GTCCCCTCCACCCAGAGTCAGCACTATGAAAGCTGAGGAGAAAACTCTCTTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR TCA 90 bp | CTGTGGACTTATCTTCTCAGCTCCTGTTTGGTCGGCTCCATTTTGAGAGCTTTTTGGCGTTCAAAAAGCTaGCGAAGCTGGCTCCAAAAC | + |
Preference number: 4 (lower is better) Translates to: LWTYLLSSCLVGSILRAFWRSKS*RSWLQN Trigger: GTTTTGGAGCCAGCTTCGTCAGCTTTTTGAACGCCA...AAAAGCTCTCAAAATGGAGCCGACCAAACAGGAGCTGAGAAGATAAGTCCACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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CDS-3UTR TCA 90 bp | CTGTGGACTTATCTTCTCAGCTCCTGTTTGGTCGGCTCCATTTTGAGAGCTTTTGTTCCTGAAGGGCGTTaGTGTCCACATAGCACTTAC | + |
Preference number: 4 (lower is better) Translates to: LWTYLLSSCLVGSILRAFVPEGR*CPHSTY Trigger: GTAAGTGCTATGTGGACATCAACGCCCTTCAGGAAC...AAAAGCTCTCAAAATGGAGCCGACCAAACAGGAGCTGAGAAGATAAGTCCACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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CDS-3UTR TCA 90 bp | CTCGAAGGAATCAAATGCATCCTTGAAGTTGAGTTCAATCATGCTGCACCAGCCGTTCCTGAAGGGCGTTaGTGTCCACATAGCACTTAC | + |
Preference number: 4 (lower is better) Translates to: LEGIKCILEVEFNHAAPAVPEGR*CPHSTY Trigger: GTAAGTGCTATGTGGACATCAACGCCCTTCAGGAAC...GGCTGGTGCAGCATGATTGAACTCAACTTCAAGGATGCATTTGATTCCTTCGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234974.2 |
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CDS-3UTR TCA 90 bp | TTCAAGAGAGTTTTCTCCTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACAAGTCAAGGCACTGTTaGTTTGACACTCTAACCGCT | + |
Preference number: 4 (lower is better) Translates to: FKRVFSSAFIVLTLGGGDKSRHC*FDTLTA Trigger: AGCGGTTAGAGTGTCAAATCAACAGTGCCTTGACTT...GTCCCCTCCACCCAGAGTCAGCACTATGAAAGCTGAGGAGAAAACTCTCTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR TCA 90 bp | ATCTTCAAGAGAGTTTTCTCCTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGGCTCGCTGGAAGAACTaGAGAGCATCTTGTGAGTTT | + |
Preference number: 4 (lower is better) Translates to: IFKRVFSSAFIVLTLGGGARWKN*RASCEF Trigger: AAACTCACAAGATGCTCTTCAGTTCTTCCAGCGAGC...CCCTCCACCCAGAGTCAGCACTATGAAAGCTGAGGAGAAAACTCTCTTGAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR GCA 90 bp | ATCTTTAGTATGTCAGTGACACCAGGAAACCCATCCCTGGCCCAGGTGGTCTCCCTCGAAGGAATCAAATaGATCCTTGAAGTTGAGTTC | + |
Preference number: 4 (lower is better) Translates to: IFSMSVTPGNPSLAQVVSLEGIK*ILEVEF Trigger: GAACTCAACTTCAAGGATGCATTTGATTCCTTCGAG...GGAGACCACCTGGGCCAGGGATGGGTTTCCTGGTGTCACTGACATACTAAAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR GCA 90 bp | GAAACCCATCCCTGGCCCAGGTGGTCTCCAGAAGAAAAGCTGATCTTCAAGAGAGCACCAAGGAGCAAATaGTTTAATCCAACGACAGAT | + |
Preference number: 4 (lower is better) Translates to: ETHPWPRWSPEEKLIFKRAPRSK*FNPTTD Trigger: ATCTGTCGTTGGATTAAAGCATTTGCTCCTTGGTGC...TCTCTTGAAGATCAGCTTTTCTTCTGGAGACCACCTGGGCCAGGGATGGGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR GCA 90 bp | AAAGCTGATCTTCAAGAGAGTTTTCTCCTCAGCTTTCATAGTGCTGACTCTGGGCCAGAGCAGCGTGGATaGGGACGTGCAATCTGTTTT | + |
Preference number: 4 (lower is better) Translates to: KADLQESFLLSFHSADSGPEQRG*GRAICF Trigger: AAAACAGATTGCACGTCCGCATCCACGCTGCTCTGG...CCCAGAGTCAGCACTATGAAAGCTGAGGAGAAAACTCTCTTGAAGATCAGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234966.2 |
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CDS-3UTR GCA 90 bp | ATCTTCAAGAGAGTTTTCTCCTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGGAAGAAGTAGAGTTCTaGCTCTTCCCACAGTCTGTG | + |
Preference number: 4 (lower is better) Translates to: IFKRVFSSAFIVLTLGGGEEVEF*LFPQSV Trigger: CACAGACTGTGGGAAGAGGCAGAACTCTACTTCTTC...CCCTCCACCCAGAGTCAGCACTATGAAAGCTGAGGAGAAAACTCTCTTGAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234255.2 |
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CDS-3UTR CCA 90 bp | AAAGCTGATCTTCAAGAGAGTTTTCTCCTCAGCTTTCATAGTGCTGACTCTGGGAGCTCCAGAGCAGTGTaGAAGGAAGTCAAGGCACTG | + |
Preference number: 4 (lower is better) Translates to: KADLQESFLLSFHSADSGSSRAV*KEVKAL Trigger: CAGTGCCTTGACTTCCTTCCACACTGCTCTGGAGCT...CCCAGAGTCAGCACTATGAAAGCTGAGGAGAAAACTCTCTTGAAGATCAGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CCA 90 bp | GTCAGTGACACCAGGAAACCCATCCCTGGCCCAGGTGGTCTCCAGAAGAAAAGCCTTTTGAACAGCTTCTaGACTTCTTTAAGAACAAGT | + |
Preference number: 4 (lower is better) Translates to: VSDTRKPIPGPGGLQKKSLLNSF*TSLRTS Trigger: ACTTGTTCTTAAAGAAGTCCAGAAGCTGTTCAAAAG...GCTTTTCTTCTGGAGACCACCTGGGCCAGGGATGGGTTTCCTGGTGTCACTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CCA 90 bp | TTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGTTTATCCTTTTGAACAGCTTCTaGACTTCTTTAAGAACAAGT | + |
Preference number: 4 (lower is better) Translates to: FHSADSGWRGRRGHWEFILLNSF*TSLRTS Trigger: ACTTGTTCTTAAAGAAGTCCAGAAGCTGTTCAAAAG...GATAAACTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000234255.2 |
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CDS-3UTR CCA 90 bp | CAGGTCGGGCATTGCTCTCGTTATGGACATCTTTATTACTCCATAGCTACATGTACACAGCGCTCTGGTTaGGGTTTGCTTCCGAAATCG | + |
Preference number: 4 (lower is better) Translates to: QVGHCSRYGHLYYSIATCTQRSG*GLLPKS Trigger: CGATTTCGGAAGCAAACCCCAACCAGAGCGCTGTGT...ACATGTAGCTATGGAGTAATAAAGATGTCCATAACGAGAGCAATGCCCGACCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234966.2 |
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CDS-3UTR TCA 90 bp | AAAGCTGATCTTCAAGAGAGTTTTCTCCTCAGCTTTCATAGTGCTGACTCTGGGGTTCCTGAAGGGCGTTaGTGTCCACATAGCACTTAC | + |
Preference number: 4 (lower is better) Translates to: KADLQESFLLSFHSADSGVPEGR*CPHSTY Trigger: GTAAGTGCTATGTGGACATCAACGCCCTTCAGGAAC...CCCAGAGTCAGCACTATGAAAGCTGAGGAGAAAACTCTCTTGAAGATCAGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR TCA 90 bp | CTGTGGACTTATCTTCTCAGCTCCTGTTTGGTCGGCTCCATTTTGAGAGCTTTTTATTGTTTGAAAAGCTaGTCCGACTCCCTGAAGCCG | + |
Preference number: 4 (lower is better) Translates to: LWTYLLSSCLVGSILRAFYCLKS*SDSLKP Trigger: CGGCTTCAGGGAGTCGGATCAGCTTTTCAAACAATA...AAAAGCTCTCAAAATGGAGCCGACCAAACAGGAGCTGAGAAGATAAGTCCACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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CDS-3UTR TCA 90 bp | TTCAAGAGAGTTTTCTCCTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGATTTCTGTATTGTTTaGAAAGCTGATCCGACTCCC | + |
Preference number: 4 (lower is better) Translates to: FKRVFSSAFIVLTLGGGDDFCIV*KADPTP Trigger: GGGAGTCGGATCAGCTTTTCAAACAATACAGAAATC...GTCCCCTCCACCCAGAGTCAGCACTATGAAAGCTGAGGAGAAAACTCTCTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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CDS-3UTR GCA 90 bp | AACCCATCCCTGGCCCAGGTGGTCTCCAGAAGAAAAGCTGATCTTCAAGAGAGTCTCGAAGGAATCAAATaGATCCTTGAAGTTGAGTTC | + |
Preference number: 4 (lower is better) Translates to: NPSLAQVVSRRKADLQESLEGIK*ILEVEF Trigger: GAACTCAACTTCAAGGATGCATTTGATTCCTTCGAG...ACTCTCTTGAAGATCAGCTTTTCTTCTGGAGACCACCTGGGCCAGGGATGGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR GCA 90 bp | GAAACCCATCCCTGGCCCAGGTGGTCTCCAGAAGAAAAGCTGATCTTCAAGAGACTCGAAGGAATCAAATaGATCCTTGAAGTTGAGTTC | + |
Preference number: 4 (lower is better) Translates to: ETHPWPRWSPEEKLIFKRLEGIK*ILEVEF Trigger: GAACTCAACTTCAAGGATGCATTTGATTCCTTCGAG...TCTCTTGAAGATCAGCTTTTCTTCTGGAGACCACCTGGGCCAGGGATGGGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CCA 90 bp | CTCGAAGGAATCAAATGCATCCTTGAAGTTGAGTTCAATCATGCTGCACCAGCCGGTTTGGGGGCACCATaGATATGCAAAGGTGGAAAA | + |
Preference number: 4 (lower is better) Translates to: LEGIKCILEVEFNHAAPAGLGAP*ICKGGK Trigger: TTTTCCACCTTTGCATATCCATGGTGCCCCCAAACC...GGCTGGTGCAGCATGATTGAACTCAACTTCAAGGATGCATTTGATTCCTTCGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234974.2 |
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3UTR CAA 72 bp | CATGAAATGCGAGCAACTGGAGAATGTCAGCTGCCATaGCTGTACCTGAGTCTCACTGTACACAAAAGAAGG | + |
Preference number: 4 (lower is better) Translates to: HEMRATGECQLP*LYLSLTVHKRR Trigger: CCTTCTTTTGTGTACAGTGAGACTCAGGTACAGCAATGGCAGCTGACATTCTCCAGTTGCTCGCATTTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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CDS-3UTR GCA 90 bp | GGAATCAAATGCATCCTTGAAGTTGAGTTCAATCATGCTGCACCAGCCAATTTCGGGGCACCATGGATATaGAAAGGTGGAAAAGGCCAT | + |
Preference number: 4 (lower is better) Translates to: GIKCILEVEFNHAAPANFGAPWI*KGGKGH Trigger: ATGGCCTTTTCCACCTTTGCATATCCATGGTGCCCC...GAAATTGGCTGGTGCAGCATGATTGAACTCAACTTCAAGGATGCATTTGATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234974.2 |
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CDS-3UTR CCA 90 bp | GAAGAAAAGCTGATCTTCAAGAGAGTTTTCTCCTCAGCTTTCATAGTGCTGACTAGCTCCAGAGCAGTGTaGAAGGAAGTCAAGGCACTG | + |
Preference number: 4 (lower is better) Translates to: EEKLIFKRVFSSAFIVLTSSRAV*KEVKAL Trigger: CAGTGCCTTGACTTCCTTCCACACTGCTCTGGAGCT...AGTCAGCACTATGAAAGCTGAGGAGAAAACTCTCTTGAAGATCAGCTTTTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CCA 90 bp | CCAGGAAACCCATCCCTGGCCCAGGTGGTCTCCAGAAGAAAAGCTGATCTTCAACTTTTGAACAGCTTCTaGACTTCTTTAAGAACAAGT | + |
Preference number: 4 (lower is better) Translates to: PGNPSLAQVVSRRKADLQLLNSF*TSLRTS Trigger: ACTTGTTCTTAAAGAAGTCCAGAAGCTGTTCAAAAG...TTGAAGATCAGCTTTTCTTCTGGAGACCACCTGGGCCAGGGATGGGTTTCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR TCA 90 bp | AAAGCTGATCTTCAAGAGAGTTTTCTCCTCAGCTTTCATAGTGCTGACTCTGGGAAGTCAAGGCACTGTTaGTTTGACACTCTAACCGCT | + |
Preference number: 4 (lower is better) Translates to: KADLQESFLLSFHSADSGKSRHC*FDTLTA Trigger: AGCGGTTAGAGTGTCAAATCAACAGTGCCTTGACTT...CCCAGAGTCAGCACTATGAAAGCTGAGGAGAAAACTCTCTTGAAGATCAGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR GCA 90 bp | GAACTTTTATTCAGAAATTCTGCTTGCCTCTGCCTCCTGTGTGCTAGGACTAAAGAAGAAGTAGAGTTCTaGCTCTTCCCACAGTCTCTG | + |
Preference number: 4 (lower is better) Translates to: ELLFRNSACLCLLCARTKEEVEF*LFPQSL Trigger: CAGAGACTGTGGGAAGAGGCAGAACTCTACTTCTTC...TTTAGTCCTAGCACACAGGAGGCAGAGGCAAGCAGAATTTCTGAATAAAAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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CDS-3UTR CCA 90 bp | GGAATCAAATGCATCCTTGAAGTTGAGTTCAATCATGCTGCACCAGCCAATTTCCCTTCGGCCACAACGTaGTTATCATTTGCAGCATCA | + |
Preference number: 4 (lower is better) Translates to: GIKCILEVEFNHAAPANFPSATT*LSFAAS Trigger: TGATGCTGCAAATGATAACCACGTTGTGGCCGAAGG...GAAATTGGCTGGTGCAGCATGATTGAACTCAACTTCAAGGATGCATTTGATTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234974.2 |
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3UTR CAA 72 bp | CTAAAGGCATGTGCCACCCCATCCAGCCTAGAAGGTTaGTGCCATAATCACTATAGGAGTATTTCCAGTATA | + |
Preference number: 4 (lower is better) Translates to: LKACATPSSLEG*CHNHYRSISSI Trigger: TATACTGGAAATACTCCTATAGTGATTATGGCACAAACCTTCTAGGCTGGATGGGGTGGCACATGCCTTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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CDS-3UTR TCA 90 bp | CGGGCATTGCTCTCGTTATGGACATCTTTATTACTCCATAGCTACATGTTTAAATGGCGTTCAAAAAGCTaGCGAAGCTGGCTCCAAAAC | + |
Preference number: 4 (lower is better) Translates to: RALLSLWTSLLLHSYMFKWRSKS*RSWLQN Trigger: GTTTTGGAGCCAGCTTCGTCAGCTTTTTGAACGCCA...TTTAAACATGTAGCTATGGAGTAATAAAGATGTCCATAACGAGAGCAATGCCCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234966.2 |
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CDS-3UTR TCA 90 bp | GAACTTTTATTCAGAAATTCTGCTTGCCTCTGCCTCCTGTGTGCTAGGACTAAAAAATCCTCCTTTGCCTaGAGAAGTAGAGTTCTGCCT | + |
Preference number: 4 (lower is better) Translates to: ELLFRNSACLCLLCARTKKSSFA*RSRVLP Trigger: AGGCAGAACTCTACTTCTTCAGGCAAAGGAGGATTT...TTTAGTCCTAGCACACAGGAGGCAGAGGCAAGCAGAATTTCTGAATAAAAGTTC 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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CDS-3UTR GCA 90 bp | GAAGAAAAGCTGATCTTCAAGAGAGTTTTCTCCTCAGCTTTCATAGTGCTGACTGAAGAAGTAGAGTTCTaGCTCTTCCCACAGTCTCTG | + |
Preference number: 4 (lower is better) Translates to: EEKLIFKRVFSSAFIVLTEEVEF*LFPQSL Trigger: CAGAGACTGTGGGAAGAGGCAGAACTCTACTTCTTC...AGTCAGCACTATGAAAGCTGAGGAGAAAACTCTCTTGAAGATCAGCTTTTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234966.2 |
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CDS-3UTR TCA 90 bp | CGGGCATTGCTCTCGTTATGGACATCTTTATTACTCCATAGCTACATGTTTAAAGCTCGCTGGAAGAACTaGAGAGCATCTTGTGAGTTT | + |
Preference number: 4 (lower is better) Translates to: RALLSLWTSLLLHSYMFKARWKN*RASCEF Trigger: AAACTCACAAGATGCTCTTCAGTTCTTCCAGCGAGC...TTTAAACATGTAGCTATGGAGTAATAAAGATGTCCATAACGAGAGCAATGCCCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234966.2 |
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CDS-3UTR GCA 90 bp | AAAGCTGATCTTCAAGAGAGTTTTCTCCTCAGCTTTCATAGTGCTGACTCTGGGCTCGAAGGAATCAAATaGATCCTTGAAGTTGAGTTC | + |
Preference number: 4 (lower is better) Translates to: KADLQESFLLSFHSADSGLEGIK*ILEVEF Trigger: GAACTCAACTTCAAGGATGCATTTGATTCCTTCGAG...CCCAGAGTCAGCACTATGAAAGCTGAGGAGAAAACTCTCTTGAAGATCAGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR GCA 90 bp | CGGGCATTGCTCTCGTTATGGACATCTTTATTACTCCATAGCTACATGTTTAAAGCACCAAGGAGCAAATaGTTTAATCCAACGACAGAT | + |
Preference number: 4 (lower is better) Translates to: RALLSLWTSLLLHSYMFKAPRSK*FNPTTD Trigger: ATCTGTCGTTGGATTAAAGCATTTGCTCCTTGGTGC...TTTAAACATGTAGCTATGGAGTAATAAAGATGTCCATAACGAGAGCAATGCCCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234966.2 |
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CDS-3UTR CCA 90 bp | GAAGAAAAGCTGATCTTCAAGAGAGTTTTCTCCTCAGCTTTCATAGTGCTGACTCTTTTGAACAGCTTCTaGACTTCTTTAAGAACAAGT | + |
Preference number: 4 (lower is better) Translates to: EEKLIFKRVFSSAFIVLTLLNSF*TSLRTS Trigger: ACTTGTTCTTAAAGAAGTCCAGAAGCTGTTCAAAAG...AGTCAGCACTATGAAAGCTGAGGAGAAAACTCTCTTGAAGATCAGCTTTTCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS GCA 90 bp | TTGTTGAGAAGCATATTGATGCCAGCCAAGGCCAGCTCCGCGTCCTaGAGGGGCGCCGCTGCGGCGTCCGGGTCGCCGTCCTCCCTCCGC | + |
Preference number: 5 (lower is better) Translates to: LLRSILMPAKASSAS*RGAAAASGSPSSLR Trigger: GCGGAGGGAGGACGGCGACCCGGACGCCGCAGCGGCGCCCCTGCAGGACGCGGAGCTGGCCTTGGCTGGCATCAATATGCTTCTCAACAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | CTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGAGCAGGTTGATGATTTaGAGCAGGTTTGGGGGCACC | + |
Preference number: 5 (lower is better) Translates to: LSFHSADSGWRGRRGHWESRLMI*SRFGGT Trigger: GGTGCCCCCAAACCTGCTCAAAATCATCAACCTGCT...CTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | GCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGTTTATCACTGAGGAACACACAGCGCTCTGGTaGGGGTTTGCTTCCGAAATC | + |
Preference number: 5 (lower is better) Translates to: ADSGWRGRRGHWEFITEEHTALW*GFASEI Trigger: GATTTCGGAAGCAAACCCCAACCAGAGCGCTGTGTG...TTCCTCAGTGATAAACTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000234255.2 |
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CDS-3UTR CAA 90 bp | CTCCTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGTGGGGAAGGAGCAGTTaGGAAGGGCTTTCCACAAGT | + |
Preference number: 5 (lower is better) Translates to: LLSFHSADSGWRGRRGHWWGRSS*EGLSTS Trigger: ACTTGTGGAAAGCCCTTCCAAACTGCTCCTTCCCCA...CCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCTGAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | CGGAGGGGCCACTGGGAGTTTATCACTGAGGAACAAGTTCCCTTAGGGAGGCCACGCTCTGGTTGGGGTTaGCTTCCGAAATCGCTCAGC | + |
Preference number: 5 (lower is better) Translates to: RRGHWEFITEEQVPLGRPRSGWG*LPKSLS Trigger: GCTGAGCGATTTCGGAAGCAAACCCCAACCAGAGCG...TGGCCTCCCTAAGGGAACTTGTTCCTCAGTGATAAACTCCCAGTGGCCCCTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234255.2 |
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CDS-3UTR CAA 90 bp | AGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGTTTCACACAGCGCTCTGGTaGGGGTTTGCTTCCGAAATC | + |
Preference number: 5 (lower is better) Translates to: SFHSADSGWRGRRGHWEFHTALW*GFASEI Trigger: GATTTCGGAAGCAAACCCCAACCAGAGCGCTGTGTG...AAACTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | CTCCTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGTAGGCCGACAACTCTaGTTTCACAAAGGAAAGCAC | + |
Preference number: 5 (lower is better) Translates to: LLSFHSADSGWRGRRGHWVGRQL*FHKGKH Trigger: GTGCTTTCCTTTGTGAAACAAGAGTTGTCGGCCTAC...CCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCTGAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | GACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGTTTATCACTGAGGAACAAAGCAGGTTGATGATTTaGAGCAGGTTTGGGGGCACC | + |
Preference number: 5 (lower is better) Translates to: DSGWRGRRGHWEFITEEQSRLMI*SRFGGT Trigger: GGTGCCCCCAAACCTGCTCAAAATCATCAACCTGCT...TTGTTCCTCAGTGATAAACTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000234255.2 |
||
CDS-3UTR CAA 90 bp | CTCCTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGGAAAGCCCAGCAGGTaGATGATTTTGAGCAGGTTT | + |
Preference number: 5 (lower is better) Translates to: LLSFHSADSGWRGRRGHWGKPSR*MILSRF Trigger: AAACCTGCTCAAAATCATCAACCTGCTGGGCTTTCC...CCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCTGAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | AGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGTTTTCATCCAAGCCCCCTTaGTTGTCACTGCCGTCCAAA | + |
Preference number: 5 (lower is better) Translates to: SFHSADSGWRGRRGHWEFSSKPP*LSLPSK Trigger: TTTGGACGGCAGTGACAACAAAGGGGGCTTGGATGA...AAACTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | CGGAGGGGCCACTGGGAGTTTATCACTGAGGAACAAGTTCCCTTAGGGAGGCCATCATCCAAGCCCCCTTaGTTGTCACTGCCGTCCAAA | + |
Preference number: 5 (lower is better) Translates to: RRGHWEFITEEQVPLGRPSSKPP*LSLPSK Trigger: TTTGGACGGCAGTGACAACAAAGGGGGCTTGGATGA...TGGCCTCCCTAAGGGAACTTGTTCCTCAGTGATAAACTCCCAGTGGCCCCTCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234255.2 |
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CDS-3UTR CAA 90 bp | ATCTTTAGTATGTCAGTGACACCAGGAAACCCATCCCTGGCCCAGGTGGTCTCCCGCTCTGGTTGGGGTTaGCTTCCGAAATCGCTCAGC | + |
Preference number: 5 (lower is better) Translates to: IFSMSVTPGNPSLAQVVSRSGWG*LPKSLS Trigger: GCTGAGCGATTTCGGAAGCAAACCCCAACCAGAGCG...GGAGACCACCTGGGCCAGGGATGGGTTTCCTGGTGTCACTGACATACTAAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | AGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGTTTCACTTCATGGCAAGCTaGACTCATCCTCTGCAGGTT | + |
Preference number: 5 (lower is better) Translates to: SFHSADSGWRGRRGHWEFHFMAS*THPLQV Trigger: AACCTGCAGAGGATGAGTCAAGCTTGCCATGAAGTG...AAACTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS CCA 90 bp | TTCAGTCTGCTTAAGGACTCCTCGGTCACCCCTTCGGCCACAACGTaGTTATCATTTGCAGCATCAGAAGCCAAGGGCTCTTCCGTCAGC | + |
Preference number: 5 (lower is better) Translates to: FSLLKDSSVTPSATT*LSFAASEAKGSSVS Trigger: GCTGACGGAAGAGCCCTTGGCTTCTGATGCTGCAAATGATAACCACGTTGTGGCCGAAGGGGTGACCGAGGAGTCCTTAAGCAGACTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 ENSMUST00000234974.2 |
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CDS-3UTR CAA 90 bp | GACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGTTTATCACTGAGGAACAAGGAAAGCCCAGCAGGTaGATGATTTTGAGCAGGTTT | + |
Preference number: 5 (lower is better) Translates to: DSGWRGRRGHWEFITEEQGKPSR*MILSRF Trigger: AAACCTGCTCAAAATCATCAACCTGCTGGGCTTTCC...TTGTTCCTCAGTGATAAACTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000234255.2 |
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CDS-3UTR CAA 90 bp | ATAGGTGCTGCGTGGCTAGGACTGGCAGCAGGGACATGCTGTGGACTTATCTTCTCATCCAAGCCCCCTTaGTTGTCACTGCCGTCCAAA | + |
Preference number: 5 (lower is better) Translates to: IGAAWLGLAAGTCCGLIFSSKPP*LSLPSK Trigger: TTTGGACGGCAGTGACAACAAAGGGGGCTTGGATGA...GAAGATAAGTCCACAGCATGTCCCTGCTGCCAGTCCTAGCCACGCAGCACCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | GTCAGTGACACCAGGAAACCCATCCCTGGCCCAGGTGGTCTCCAGAAGAAAAGCCACTTCATGGCAAGCTaGACTCATCCTCTGCAGGTT | + |
Preference number: 5 (lower is better) Translates to: VSDTRKPIPGPGGLQKKSHFMAS*THPLQV Trigger: AACCTGCAGAGGATGAGTCAAGCTTGCCATGAAGTG...GCTTTTCTTCTGGAGACCACCTGGGCCAGGGATGGGTTTCCTGGTGTCACTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | AGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGTTTTCCCTGAAGCCGTTGTaGAGAAGCATATTGATGCCA | + |
Preference number: 5 (lower is better) Translates to: SFHSADSGWRGRRGHWEFSLKPL*RSILMP Trigger: TGGCATCAATATGCTTCTCAACAACGGCTTCAGGGA...AAACTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | AGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGTTTTTCTTTAAGAACAAGTaGTGCCCCATCCACATCACC | + |
Preference number: 5 (lower is better) Translates to: SFHSADSGWRGRRGHWEFFFKNK*CPIHIT Trigger: GGTGATGTGGATGGGGCACAACTTGTTCTTAAAGAA...AAACTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | TTCAAGAGAGTTTTCTCCTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACCGCTCTGGTTGGGGTTaGCTTCCGAAATCGCTCAGC | + |
Preference number: 5 (lower is better) Translates to: FKRVFSSAFIVLTLGGGDRSGWG*LPKSLS Trigger: GCTGAGCGATTTCGGAAGCAAACCCCAACCAGAGCG...GTCCCCTCCACCCAGAGTCAGCACTATGAAAGCTGAGGAGAAAACTCTCTTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | AACCCATCCCTGGCCCAGGTGGTCTCCAGAAGAAAAGCTGATCTTCAAGAGAGTCACACAGCGCTCTGGTaGGGGTTTGCTTCCGAAATC | + |
Preference number: 5 (lower is better) Translates to: NPSLAQVVSRRKADLQESHTALW*GFASEI Trigger: GATTTCGGAAGCAAACCCCAACCAGAGCGCTGTGTG...ACTCTCTTGAAGATCAGCTTTTCTTCTGGAGACCACCTGGGCCAGGGATGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | ATCTTTAGTATGTCAGTGACACCAGGAAACCCATCCCTGGCCCAGGTGGTCTCCTGGGGAAGGAGCAGTTaGGAAGGGCTTTCCACAAGT | + |
Preference number: 5 (lower is better) Translates to: IFSMSVTPGNPSLAQVVSWGRSS*EGLSTS Trigger: ACTTGTGGAAAGCCCTTCCAAACTGCTCCTTCCCCA...GGAGACCACCTGGGCCAGGGATGGGTTTCCTGGTGTCACTGACATACTAAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | TTTATCACTGAGGAACAAGTTCCCTTAGGGAGGCCAGAGCAGCGTGGATGCGGATGGGGAAGGAGCAGTTaGGAAGGGCTTTCCACAAGT | + |
Preference number: 5 (lower is better) Translates to: FITEEQVPLGRPEQRGCGWGRSS*EGLSTS Trigger: ACTTGTGGAAAGCCCTTCCAAACTGCTCCTTCCCCA...TCCGCATCCACGCTGCTCTGGCCTCCCTAAGGGAACTTGTTCCTCAGTGATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234255.2 |
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CDS-3UTR CAA 90 bp | GAGAGTTTTCTCCTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGCACTTCATGGCAAGCTaGACTCATCCTCTGCAGGTT | + |
Preference number: 5 (lower is better) Translates to: ESFLLSFHSADSGWRGRRHFMAS*THPLQV Trigger: AACCTGCAGAGGATGAGTCAAGCTTGCCATGAAGTG...CCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCTGAGGAGAAAACTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | AGTATGTCAGTGACACCAGGAAACCCATCCCTGGCCCAGGTGGTCTCCAGAAGAGTAGGCCGACAACTCTaGTTTCACAAAGGAAAGCAC | + |
Preference number: 5 (lower is better) Translates to: SMSVTPGNPSLAQVVSRRVGRQL*FHKGKH Trigger: GTGCTTTCCTTTGTGAAACAAGAGTTGTCGGCCTAC...TCTTCTGGAGACCACCTGGGCCAGGGATGGGTTTCCTGGTGTCACTGACATACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | CTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGGAATCAAATGCATCCTaGAAGTTGAGTTCAATCATG | + |
Preference number: 5 (lower is better) Translates to: LSFHSADSGWRGRRGHWEESNAS*KLSSIM Trigger: CATGATTGAACTCAACTTCAAGGATGCATTTGATTC...CTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | TTTAGTATGTCAGTGACACCAGGAAACCCATCCCTGGCCCAGGTGGTCTCCAGACACTTCATGGCAAGCTaGACTCATCCTCTGCAGGTT | + |
Preference number: 5 (lower is better) Translates to: FSMSVTPGNPSLAQVVSRHFMAS*THPLQV Trigger: AACCTGCAGAGGATGAGTCAAGCTTGCCATGAAGTG...TCTGGAGACCACCTGGGCCAGGGATGGGTTTCCTGGTGTCACTGACATACTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | AGTCAGCGACCTGACATGAGAGGGAATGGTGAAAGTCCAGCAACACACAGCCCTTTGTTGAGAAGCATATaGATGCCAGCCAAGGCCAGC | + |
Preference number: 5 (lower is better) Translates to: SQRPDMRGNGESPATHSPLLRSI*MPAKAS Trigger: GCTGGCCTTGGCTGGCATCAATATGCTTCTCAACAA...AGGGCTGTGTGTTGCTGGACTTTCACCATTCCCTCTCATGTCAGGTCGCTGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | CCAGGAAACCCATCCCTGGCCCAGGTGGTCTCCAGAAGAAAAGCTGATCTTCAAGTAGGCCGACAACTCTaGTTTCACAAAGGAAAGCAC | + |
Preference number: 5 (lower is better) Translates to: PGNPSLAQVVSRRKADLQVGRQL*FHKGKH Trigger: GTGCTTTCCTTTGTGAAACAAGAGTTGTCGGCCTAC...TTGAAGATCAGCTTTTCTTCTGGAGACCACCTGGGCCAGGGATGGGTTTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | CCAGGAAACCCATCCCTGGCCCAGGTGGTCTCCAGAAGAAAAGCTGATCTTCAACAACGTGGTTATCATTaGCAGCATCAGAAGCCAAGG | + |
Preference number: 5 (lower is better) Translates to: PGNPSLAQVVSRRKADLQQRGYH*QHQKPR Trigger: CCTTGGCTTCTGATGCTGCAAATGATAACCACGTTG...TTGAAGATCAGCTTTTCTTCTGGAGACCACCTGGGCCAGGGATGGGTTTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | TTCAAGAGAGTTTTCTCCTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACAGCAGGTTGATGATTTaGAGCAGGTTTGGGGGCACC | + |
Preference number: 5 (lower is better) Translates to: FKRVFSSAFIVLTLGGGDSRLMI*SRFGGT Trigger: GGTGCCCCCAAACCTGCTCAAAATCATCAACCTGCT...GTCCCCTCCACCCAGAGTCAGCACTATGAAAGCTGAGGAGAAAACTCTCTTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | GAGAGTTTTCTCCTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGTTCTTTAAGAACAAGTaGTGCCCCATCCACATCACC | + |
Preference number: 5 (lower is better) Translates to: ESFLLSFHSADSGWRGRRFFKNK*CPIHIT Trigger: GGTGATGTGGATGGGGCACAACTTGTTCTTAAAGAA...CCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCTGAGGAGAAAACTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | AGTCAGCGACCTGACATGAGAGGGAATGGTGAAAGTCCAGCAACACACAGCCCTGACTCCCTGAAGCCGTaGTTGAGAAGCATATTGATG | + |
Preference number: 5 (lower is better) Translates to: SQRPDMRGNGESPATHSPDSLKP*LRSILM Trigger: CATCAATATGCTTCTCAACAACGGCTTCAGGGAGTC...AGGGCTGTGTGTTGCTGGACTTTCACCATTCCCTCTCATGTCAGGTCGCTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | CAACCCAACCCTAAAGGGGTTGTCACCCACAGCTTGAGGACTGCTGTGTTAAAGCAACGTGGTTATCATTaGCAGCATCAGAAGCCAAGG | + |
Preference number: 5 (lower is better) Translates to: QPNPKGVVTHSLRTAVLKQRGYH*QHQKPR Trigger: CCTTGGCTTCTGATGCTGCAAATGATAACCACGTTG...CTTTAACACAGCAGTCCTCAAGCTGTGGGTGACAACCCCTTTAGGGTTGGGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | AGCCAGCTCCAGAGCAGTGTGGAAGGAAGTCAAGGCACTGTTGATTTGACACTCGGAAAGCCCAGCAGGTaGATGATTTTGAGCAGGTTT | + |
Preference number: 5 (lower is better) Translates to: SQLQSSVEGSQGTVDLTLGKPSR*MILSRF Trigger: AAACCTGCTCAAAATCATCAACCTGCTGGGCTTTCC...GAGTGTCAAATCAACAGTGCCTTGACTTCCTTCCACACTGCTCTGGAGCTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234974.2 |
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CDS-3UTR CAA 90 bp | AGCTTTCATAGTGCTGACTCTGGGTGGAGGGGACGGAGGGGCCACTGGGAGTTTGAATCAAATGCATCCTaGAAGTTGAGTTCAATCATG | + |
Preference number: 5 (lower is better) Translates to: SFHSADSGWRGRRGHWEFESNAS*KLSSIM Trigger: CATGATTGAACTCAACTTCAAGGATGCATTTGATTC...AAACTCCCAGTGGCCCCTCCGTCCCCTCCACCCAGAGTCAGCACTATGAAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | CTGATCTTCAAGAGAGTTTTCTCCTCAGCTTTCATAGTGCTGACTCTGGGTGGACACACAGCGCTCTGGTaGGGGTTTGCTTCCGAAATC | + |
Preference number: 5 (lower is better) Translates to: LIFKRVFSSAFIVLTLGGHTALW*GFASEI Trigger: GATTTCGGAAGCAAACCCCAACCAGAGCGCTGTGTG...TCCACCCAGAGTCAGCACTATGAAAGCTGAGGAGAAAACTCTCTTGAAGATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | CTGTGGACTTATCTTCTCAGCTCCTGTTTGGTCGGCTCCATTTTGAGAGCTTTTAGCAGGTTGATGATTTaGAGCAGGTTTGGGGGCACC | + |
Preference number: 5 (lower is better) Translates to: LWTYLLSSCLVGSILRAFSRLMI*SRFGGT Trigger: GGTGCCCCCAAACCTGCTCAAAATCATCAACCTGCT...AAAAGCTCTCAAAATGGAGCCGACCAAACAGGAGCTGAGAAGATAAGTCCACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | CCATCCCTGGCCCAGGTGGTCTCCAGAAGAAAAGCTGATCTTCAAGAGAGTTTTGGAAAGCCCAGCAGGTaGATGATTTTGAGCAGGTTT | + |
Preference number: 5 (lower is better) Translates to: PSLAQVVSRRKADLQESFGKPSR*MILSRF Trigger: AAACCTGCTCAAAATCATCAACCTGCTGGGCTTTCC...AAAACTCTCTTGAAGATCAGCTTTTCTTCTGGAGACCACCTGGGCCAGGGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | GTCAGTGACACCAGGAAACCCATCCCTGGCCCAGGTGGTCTCCAGAAGAAAAGCGAATCAAATGCATCCTaGAAGTTGAGTTCAATCATG | + |
Preference number: 5 (lower is better) Translates to: VSDTRKPIPGPGGLQKKSESNAS*KLSSIM Trigger: CATGATTGAACTCAACTTCAAGGATGCATTTGATTC...GCTTTTCTTCTGGAGACCACCTGGGCCAGGGATGGGTTTCCTGGTGTCACTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | AACCCATCCCTGGCCCAGGTGGTCTCCAGAAGAAAAGCTGATCTTCAAGAGAGTTTCTTTAAGAACAAGTaGTGCCCCATCCACATCACC | + |
Preference number: 5 (lower is better) Translates to: NPSLAQVVSRRKADLQESFFKNK*CPIHIT Trigger: GGTGATGTGGATGGGGCACAACTTGTTCTTAAAGAA...ACTCTCTTGAAGATCAGCTTTTCTTCTGGAGACCACCTGGGCCAGGGATGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | CTGATCTTCAAGAGAGTTTTCTCCTCAGCTTTCATAGTGCTGACTCTGGGTGGATGGGGAAGGAGCAGTTaGGAAGGGCTTTCCACAAGT | + |
Preference number: 5 (lower is better) Translates to: LIFKRVFSSAFIVLTLGGWGRSS*EGLSTS Trigger: ACTTGTGGAAAGCCCTTCCAAACTGCTCCTTCCCCA...TCCACCCAGAGTCAGCACTATGAAAGCTGAGGAGAAAACTCTCTTGAAGATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | ATCTTCAAGAGAGTTTTCTCCTCAGCTTTCATAGTGCTGACTCTGGGTGGAGGGCAACGTGGTTATCATTaGCAGCATCAGAAGCCAAGG | + |
Preference number: 5 (lower is better) Translates to: IFKRVFSSAFIVLTLGGGQRGYH*QHQKPR Trigger: CCTTGGCTTCTGATGCTGCAAATGATAACCACGTTG...CCCTCCACCCAGAGTCAGCACTATGAAAGCTGAGGAGAAAACTCTCTTGAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | CAGGTCGGGCATTGCTCTCGTTATGGACATCTTTATTACTCCATAGCTACATGTTCATCCAAGCCCCCTTaGTTGTCACTGCCGTCCAAA | + |
Preference number: 5 (lower is better) Translates to: QVGHCSRYGHLYYSIATCSSKPP*LSLPSK Trigger: TTTGGACGGCAGTGACAACAAAGGGGGCTTGGATGA...ACATGTAGCTATGGAGTAATAAAGATGTCCATAACGAGAGCAATGCCCGACCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | AACCCATCCCTGGCCCAGGTGGTCTCCAGAAGAAAAGCTGATCTTCAAGAGAGTAATGCATCCTTGAAGTaGAGTTCAATCATGCTGCAC | + |
Preference number: 5 (lower is better) Translates to: NPSLAQVVSRRKADLQESNASLK*SSIMLH Trigger: GTGCAGCATGATTGAACTCAACTTCAAGGATGCATT...ACTCTCTTGAAGATCAGCTTTTCTTCTGGAGACCACCTGGGCCAGGGATGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS GCA 90 bp | CTCTCACACAGCTTCTCTGTAGTCTTTAAGTCATCGCACGCCAACTaGATTTTCTCCTCCTCGAATGTCATCATGGCGTTCAAAAAGCTG | + |
Preference number: 5 (lower is better) Translates to: LSHSFSVVFKSSHAN*IFSSSNVIMAFKKL Trigger: CAGCTTTTTGAACGCCATGATGACATTCGAGGAGGAGAAAATGCAGTTGGCGTGCGATGACTTAAAGACTACAGAGAAGCTGTGTGAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 ENSMUST00000234974.2 |
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CDS-3UTR CAA 90 bp | CTGTGGACTTATCTTCTCAGCTCCTGTTTGGTCGGCTCCATTTTGAGAGCTTTTGTAGGCCGACAACTCTaGTTTCACAAAGGAAAGCAC | + |
Preference number: 5 (lower is better) Translates to: LWTYLLSSCLVGSILRAFVGRQL*FHKGKH Trigger: GTGCTTTCCTTTGTGAAACAAGAGTTGTCGGCCTAC...AAAAGCTCTCAAAATGGAGCCGACCAAACAGGAGCTGAGAAGATAAGTCCACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | CTCGAAGGAATCAAATGCATCCTTGAAGTTGAGTTCAATCATGCTGCACCAGCCGTAGGCCGACAACTCTaGTTTCACAAAGGAAAGCAC | + |
Preference number: 5 (lower is better) Translates to: LEGIKCILEVEFNHAAPAVGRQL*FHKGKH Trigger: GTGCTTTCCTTTGTGAAACAAGAGTTGTCGGCCTAC...GGCTGGTGCAGCATGATTGAACTCAACTTCAAGGATGCATTTGATTCCTTCGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234974.2 |
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CDS-3UTR CAA 90 bp | GGAATCAAATGCATCCTTGAAGTTGAGTTCAATCATGCTGCACCAGCCAATTTCAGCAGGTTGATGATTTaGAGCAGGTTTGGGGGCACC | + |
Preference number: 5 (lower is better) Translates to: GIKCILEVEFNHAAPANFSRLMI*SRFGGT Trigger: GGTGCCCCCAAACCTGCTCAAAATCATCAACCTGCT...GAAATTGGCTGGTGCAGCATGATTGAACTCAACTTCAAGGATGCATTTGATTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234974.2 |
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CDS-3UTR CAA 90 bp | CAGGTCGGGCATTGCTCTCGTTATGGACATCTTTATTACTCCATAGCTACATGTCAACGTGGTTATCATTaGCAGCATCAGAAGCCAAGG | + |
Preference number: 5 (lower is better) Translates to: QVGHCSRYGHLYYSIATCQRGYH*QHQKPR Trigger: CCTTGGCTTCTGATGCTGCAAATGATAACCACGTTG...ACATGTAGCTATGGAGTAATAAAGATGTCCATAACGAGAGCAATGCCCGACCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | GGAATCAAATGCATCCTTGAAGTTGAGTTCAATCATGCTGCACCAGCCAATTTCCAACGTGGTTATCATTaGCAGCATCAGAAGCCAAGG | + |
Preference number: 5 (lower is better) Translates to: GIKCILEVEFNHAAPANFQRGYH*QHQKPR Trigger: CCTTGGCTTCTGATGCTGCAAATGATAACCACGTTG...GAAATTGGCTGGTGCAGCATGATTGAACTCAACTTCAAGGATGCATTTGATTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234974.2 |
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CDS-3UTR CAA 90 bp | CAGGTCGGGCATTGCTCTCGTTATGGACATCTTTATTACTCCATAGCTACATGTAATGCATCCTTGAAGTaGAGTTCAATCATGCTGCAC | + |
Preference number: 5 (lower is better) Translates to: QVGHCSRYGHLYYSIATCNASLK*SSIMLH Trigger: GTGCAGCATGATTGAACTCAACTTCAAGGATGCATT...ACATGTAGCTATGGAGTAATAAAGATGTCCATAACGAGAGCAATGCCCGACCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | CGGGCATTGCTCTCGTTATGGACATCTTTATTACTCCATAGCTACATGTTTAAAGGAAAGCCCAGCAGGTaGATGATTTTGAGCAGGTTT | + |
Preference number: 5 (lower is better) Translates to: RALLSLWTSLLLHSYMFKGKPSR*MILSRF Trigger: AAACCTGCTCAAAATCATCAACCTGCTGGGCTTTCC...TTTAAACATGTAGCTATGGAGTAATAAAGATGTCCATAACGAGAGCAATGCCCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | GAAGAAAAGCTGATCTTCAAGAGAGTTTTCTCCTCAGCTTTCATAGTGCTGACTAATGCATCCTTGAAGTaGAGTTCAATCATGCTGCAC | + |
Preference number: 5 (lower is better) Translates to: EEKLIFKRVFSSAFIVLTNASLK*SSIMLH Trigger: GTGCAGCATGATTGAACTCAACTTCAAGGATGCATT...AGTCAGCACTATGAAAGCTGAGGAGAAAACTCTCTTGAAGATCAGCTTTTCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | CGGGCATTGCTCTCGTTATGGACATCTTTATTACTCCATAGCTACATGTTTAAATTCTTTAAGAACAAGTaGTGCCCCATCCACATCACC | + |
Preference number: 5 (lower is better) Translates to: RALLSLWTSLLLHSYMFKFFKNK*CPIHIT Trigger: GGTGATGTGGATGGGGCACAACTTGTTCTTAAAGAA...TTTAAACATGTAGCTATGGAGTAATAAAGATGTCCATAACGAGAGCAATGCCCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | CGGGCATTGCTCTCGTTATGGACATCTTTATTACTCCATAGCTACATGTTTAAAAATGCATCCTTGAAGTaGAGTTCAATCATGCTGCAC | + |
Preference number: 5 (lower is better) Translates to: RALLSLWTSLLLHSYMFKNASLK*SSIMLH Trigger: GTGCAGCATGATTGAACTCAACTTCAAGGATGCATT...TTTAAACATGTAGCTATGGAGTAATAAAGATGTCCATAACGAGAGCAATGCCCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234966.2 |
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CDS-3UTR CAA 90 bp | CGGGCATTGCTCTCGTTATGGACATCTTTATTACTCCATAGCTACATGTTTAAAGAATCAAATGCATCCTaGAAGTTGAGTTCAATCATG | + |
Preference number: 5 (lower is better) Translates to: RALLSLWTSLLLHSYMFKESNAS*KLSSIM Trigger: CATGATTGAACTCAACTTCAAGGATGCATTTGATTC...TTTAAACATGTAGCTATGGAGTAATAAAGATGTCCATAACGAGAGCAATGCCCG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234966.2 |
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CDS GCA 72 bp | AGCATATTGATGCCAGCCAAGGCCAGCTCCGCGTCCTaGAGGGGCGCCGCTGCGGCGTCCGGGTCGCCGTCC | + |
Preference number: 6 (lower is better) Translates to: SILMPAKASSAS*RGAAAASGSPS Trigger: GGACGGCGACCCGGACGCCGCAGCGGCGCCCCTGCAGGACGCGGAGCTGGCCTTGGCTGGCATCAATATGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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CDS CAA 72 bp | CCTCGGTCACCCCTTCGGCCACAACGTGGTTATCATTaGCAGCATCAGAAGCCAAGGGCTCTTCCGTCAGCT | + |
Preference number: 6 (lower is better) Translates to: PRSPLRPQRGYH*QHQKPRALPSA Trigger: AGCTGACGGAAGAGCCCTTGGCTTCTGATGCTGCAAATGATAACCACGTTGTGGCCGAAGGGGTGACCGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 ENSMUST00000234974.2 |
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CDS CAA 90 bp | AGGCCCTGTAGGCGGTCTCCAGGAAAGCCCAGCAGGTTGATGATTTaGAGCAGGTTTGGGGGCACCATGGATATGCAAAGGTGGAAAAGG | + |
Preference number: 6 (lower is better) Translates to: RPCRRSPGKPSRLMI*SRFGGTMDMQRWKR Trigger: CCTTTTCCACCTTTGCATATCCATGGTGCCCCCAAACCTGCTCAAAATCATCAACCTGCTGGGCTTTCCTGGAGACCGCCTACAGGGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 ENSMUST00000234974.2 |
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CDS CCA 72 bp | CTTAAGGACTCCTCGGTCACCCCTTCGGCCACAACGTaGTTATCATTTGCAGCATCAGAAGCCAAGGGCTCT | + |
Preference number: 6 (lower is better) Translates to: LKDSSVTPSATT*LSFAASEAKGS Trigger: AGAGCCCTTGGCTTCTGATGCTGCAAATGATAACCACGTTGTGGCCGAAGGGGTGACCGAGGAGTCCTTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 ENSMUST00000234974.2 |
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CDS CAA 90 bp | TTAAGGACTCCTCGGTCACCCCTTCGGCCACAACGTGGTTATCATTaGCAGCATCAGAAGCCAAGGGCTCTTCCGTCAGCTTCTTCTGAT | + |
Preference number: 6 (lower is better) Translates to: LRTPRSPLRPQRGYH*QHQKPRALPSASSD Trigger: ATCAGAAGAAGCTGACGGAAGAGCCCTTGGCTTCTGATGCTGCAAATGATAACCACGTTGTGGCCGAAGGGGTGACCGAGGAGTCCTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 ENSMUST00000234974.2 |
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CDS GCA 72 bp | CAGAAAAATCCTCCTTTGCCTGAAGAAGTAGAGTTCTaGCTCTTCCCACAGTCTCTGCGCTGTCCAGTAGGA | + |
Preference number: 6 (lower is better) Translates to: QKNPPLPEEVEF*LFPQSLRCPVG Trigger: TCCTACTGGACAGCGCAGAGACTGTGGGAAGAGGCAGAACTCTACTTCTTCAGGCAAAGGAGGATTTTTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234966.2 |
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CDS TCA 72 bp | CCGTCAGCTTCTTCTGATACAGTTCCTGAAGGGCGTTaGTGTCCACATAGCACTTACTGTAAATCTTCCAGG | + |
Preference number: 6 (lower is better) Translates to: PSASSDTVPEGR*CPHSTYCKSSR Trigger: CCTGGAAGATTTACAGTAAGTGCTATGTGGACATCAACGCCCTTCAGGAACTGTATCAGAAGAAGCTGACGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 ENSMUST00000234974.2 |
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CDS GCA 72 bp | AGCTTCTCTGTAGTCTTTAAGTCATCGCACGCCAACTaGATTTTCTCCTCCTCGAATGTCATCATGGCGTTC | + |
Preference number: 6 (lower is better) Translates to: SFSVVFKSSHAN*IFSSSNVIMAF Trigger: GAACGCCATGATGACATTCGAGGAGGAGAAAATGCAGTTGGCGTGCGATGACTTAAAGACTACAGAGAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 ENSMUST00000234974.2 |
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CDS CAA 72 bp | AAGGATCCACCCACCTTTTATGTAGGCCGACAACTCTaGTTTCACAAAGGAAAGCACTGCCAGGTAAACCTG | + |
Preference number: 6 (lower is better) Translates to: KDPPTFYVGRQL*FHKGKHCQVNL Trigger: CAGGTTTACCTGGCAGTGCTTTCCTTTGTGAAACAAGAGTTGTCGGCCTACATAAAAGGTGGGTGGATCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025294.9 ENSMUST00000169401.8 ENSMUST00000234255.2 ENSMUST00000234966.2 ENSMUST00000234974.2 |
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CDS TCA 72 bp | TCTCCTCCTCGAATGTCATCATGGCGTTCAAAAAGCTaGCGAAGCTGGCTCCAAAACTCATTAGTGGACTAT | + |
Preference number: 6 (lower is better) Translates to: SPPRMSSWRSKS*RSWLQNSLVDY Trigger: ATAGTCCACTAATGAGTTTTGGAGCCAGCTTCGTCAGCTTTTTGAACGCCATGATGACATTCGAGGAGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234966.2 |
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CDS GCA 72 bp | CAGAAAAATCCTCCTTTGCCTGAAGAAGTAGAGTTCTaGCTCTTCCCACAGTCTGTGAACATAAGAACAACA | + |
Preference number: 6 (lower is better) Translates to: QKNPPLPEEVEF*LFPQSVNIRTT Trigger: TGTTGTTCTTATGTTCACAGACTGTGGGAAGAGGCAGAACTCTACTTCTTCAGGCAAAGGAGGATTTTTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234255.2 |