Pregenerated sensors for TTC39A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028555Ensembl transcript IDs: ENSMUST00000064129.14, ENSMUST00000106618.8, ENSMUST00000106619.8, ENSMUST00000124209.8, ENSMUST00000139237.3, ENSMUST00000153315.8
Found 202 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGAAGGGCAGGGCAGGGGAGGTGATCTTTAGAAATGTTTCCAGGTaGTCTGTCCAGCTAGCTGTCTGTTCATCGTGCAGCCCAAGAGTG | + |
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Preference number: 1 (lower is better) Translates to: RKGRAGEVIFRNVSR*SVQLAVCSSCSPRV Trigger: CACTCTTGGGCTGCACGATGAACAGACAGCTAGCTGGACAGAGCACCTGGAAACATTTCTAAAGATCACCTCCCCTGCCCTGCCCTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
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| 3UTR CCA 90 bp | AAATGCTGTCTTTGCTTCTGCACAGATATTCTTGTGCAATCCTACTaGAGCACCAGGTGGACCCCAAGGAAGGGCAGGGCAGGGGAGGTG | + |
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Preference number: 1 (lower is better) Translates to: KCCLCFCTDILVQSY*STRWTPRKGRAGEV Trigger: CACCTCCCCTGCCCTGCCCTTCCTTGGGGTCCACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAGACAGCATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
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| 3UTR GCA 90 bp | CACACTGGTAAAAATGCTGTCTTTGCTTCTGCACAGATATTCTTGTaGAATCCTACTGGAGCACCAGGTGGACCCCAAGGAAGGGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: HTGKNAVFASAQIFL*NPTGAPGGPQGRAG Trigger: CCCTGCCCTTCCTTGGGGTCCACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAGACAGCATTTTTACCAGTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
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| 3UTR CCA 90 bp | GAGAACCAATTCCCAAAAAGTTCTCCTCTGACCTCCACACATCCATaGCATGCCTTTCCCTCTTCCCATCACAGGCAAACATGCATGCAC | + |
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Preference number: 1 (lower is better) Translates to: ENQFPKSSPLTSTHP*HAFPSSHHRQTCMH Trigger: GTGCATGCATGTTTGCCTGTGATGGGAAGAGGGAAAGGCATGCCATGGATGTGTGGAGGTCAGAGGAGAACTTTTTGGGAATTGGTTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| 3UTR TCA 90 bp | CACAGCTCAGTAGCTAGCCTGGAGTACACAGCTCAGCAGCAAAAATaGGACTCTGCCTCAAAACAAAGCAGAAGGAGAGAACCAATTCCC | + |
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Preference number: 1 (lower is better) Translates to: HSSVASLEYTAQQQK*DSASKQSRRREPIP Trigger: GGGAATTGGTTCTCTCCTTCTGCTTTGTTTTGAGGCAGAGTCTCATTTTTGCTGCTGAGCTGTGTACTCCAGGCTAGCTACTGAGCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| 3UTR TCA 90 bp | AAAACAAAGCAGAAGGAGAGAACCAATTCCCAAAAAGTTCTCCTCTaGCCTCCACACATCCATGGCATGCCTTTCCCTCTTCCCATCACA | + |
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Preference number: 1 (lower is better) Translates to: KTKQKERTNSQKVLL*PPHIHGMPFPLPIT Trigger: TGTGATGGGAAGAGGGAAAGGCATGCCATGGATGTGTGGAGGTCAGAGGAGAACTTTTTGGGAATTGGTTCTCTCCTTCTGCTTTGTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| 3UTR-3UTR TCA 90 bp | GACAGGAGAATCATCTGGAAGCTTTCCAGCCAGCTAGCCGGGAGTACACAGCTCAAGGAAGCGGCACCATaGGAACCCTGGTGTATGAAG | + |
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Preference number: 2 (lower is better) Translates to: DRRIIWKLSSQLAGSTQLKEAAP*EPWCMK Trigger: CTTCATACACCAGGGTTCTCATGGTGCCGCTTCCTT...GAGCTGTGTACTCCCGGCTAGCTGGCTGGAAAGCTTCCAGATGATTCTCCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAGGAGAGAACCAATTCCCAAAAAGTTCTCCTCTGACCTCCACACATCCATGCAGGAGCAAGAGCAGTaGCCAGAAGGAAGCGGCACC | + |
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Preference number: 2 (lower is better) Translates to: RRREPIPKKFSSDLHTSMQEQEQ*PEGSGT Trigger: GGTGCCGCTTCCTTCTGGTCACTGCTCTTGCTCCTG...CATGGATGTGTGGAGGTCAGAGGAGAACTTTTTGGGAATTGGTTCTCTCCTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| 3UTR-3UTR GCA 90 bp | GGCAGAGACAGGAGAATCATCTGGAAGCTTTCCAGCCAGCTAGCCGGGAGTACAGCTCCAGGTGTTTGCTaGATGAATCAAGCAAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: GRDRRIIWKLSSQLAGSTAPGVC*MNQAKQ Trigger: CTGCTTTGCTTGATTCATGCAGCAAACACCTGGAGC...TGTACTCCCGGCTAGCTGGCTGGAAAGCTTCCAGATGATTCTCCTGTCTCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| 3UTR CAA 90 bp | GGCCACACTGGTAAAAATGCTGTCTTTGCTTCTGCACAGATATTCTaGTGCAATCCTACTGGAGCACCAGGTGGACCCCAAGGAAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: GHTGKNAVFASAQIF*CNPTGAPGGPQGRA Trigger: TGCCCTTCCTTGGGGTCCACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAGACAGCATTTTTACCAGTGTGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064129.14 |
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| 3UTR-3UTR TCA 90 bp | AGAAGGAGAGAACCAATTCCCAAAAAGTTCTCCTCTGACCTCCACACATCCATGGAGAACCCTGGTGTATaGAGAAGACACGCCCACCCC | + |
|
Preference number: 2 (lower is better) Translates to: RRREPIPKKFSSDLHTSMENPGV*RRHAHP Trigger: GGGGTGGGCGTGTCTTCTTCATACACCAGGGTTCTC...CATGGATGTGTGGAGGTCAGAGGAGAACTTTTTGGGAATTGGTTCTCTCCTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| 3UTR-3UTR TCA 90 bp | CAACACTTGAGAGGCAGAGGCAAGTGGATTGCTGTGAGTTCAAGGCTGGTTTGGAGCAAAGCAGATCTGTaGCAATGCCTGTGTCCACGT | + |
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Preference number: 2 (lower is better) Translates to: QHLRGRGKWIAVSSRLVWSKADL*QCLCPR Trigger: ACGTGGACACAGGCATTGTCACAGATCTGCTTTGCT...CCAAACCAGCCTTGAACTCACAGCAATCCACTTGCCTCTGCCTCTCAAGTGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| 3UTR-3UTR TCA 90 bp | CAACACTTGAGAGGCAGAGGCAAGTGGATTGCTGTGAGTTCAAGGCTGGTTTGGCAAAAAGTTCTCCTCTaGCCTCCACACATCCATGGC | + |
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Preference number: 2 (lower is better) Translates to: QHLRGRGKWIAVSSRLVWQKVLL*PPHIHG Trigger: GCCATGGATGTGTGGAGGTCAGAGGAGAACTTTTTG...CCAAACCAGCCTTGAACTCACAGCAATCCACTTGCCTCTGCCTCTCAAGTGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGGTAACCTTAGGAGTCCTCTCCTTAGGACTCTGCTTTCCTGTCCCAGTCAAACCTCCACACATCCATaGCATGCCTTTCCCTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: SGNLRSPLLRTLLSCPSQTSTHP*HAFPSS Trigger: GGAAGAGGGAAAGGCATGCCATGGATGTGTGGAGGT...TTGACTGGGACAGGAAAGCAGAGTCCTAAGGAGAGGACTCCTAAGGTTACCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| 3UTR-3UTR CCA 90 bp | CAACACTTGAGAGGCAGAGGCAAGTGGATTGCTGTGAGTTCAAGGCTGGTTTGGGACAGGAGAATCATCTaGAAGCTTTCCAGCCAGCTA | + |
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Preference number: 2 (lower is better) Translates to: QHLRGRGKWIAVSSRLVWDRRII*KLSSQL Trigger: TAGCTGGCTGGAAAGCTTCCAGATGATTCTCCTGTC...CCAAACCAGCCTTGAACTCACAGCAATCCACTTGCCTCTGCCTCTCAAGTGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAAAGGACCTCACATTGTGGGAAGTATACAAATGGGGGCTAGGGAGATGACTCACACATCCATGGCATaGCTTTCCCTCTTCCCATCA | + |
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Preference number: 2 (lower is better) Translates to: QKGPHIVGSIQMGAREMTHTSMA*LSLFPS Trigger: TGATGGGAAGAGGGAAAGGCATGCCATGGATGTGTG...AGTCATCTCCCTAGCCCCCATTTGTATACTTCCCACAATGTGAGGTCCTTTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| 3UTR CAA 90 bp | CCCGTATGTGTGAAGGCTTTGGCCACACTGGTAAAAATGCTGTCTTaGCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAG | + |
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Preference number: 2 (lower is better) Translates to: PVCVKALATLVKMLS*LLHRYSCAILLEHQ Trigger: CTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAGACAGCATTTTTACCAGTGTGGCCAAAGCCTTCACACATACGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064129.14 |
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| 3UTR-3UTR TCA 90 bp | TCAGGTAACCTTAGGAGTCCTCTCCTTAGGACTCTGCTTTCCTGTCCCAGTCAACAGGTGTTTGCTGCATaGATCAAGCAAAGCAGATCT | + |
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Preference number: 2 (lower is better) Translates to: SGNLRSPLLRTLLSCPSQQVFAA*IKQSRS Trigger: AGATCTGCTTTGCTTGATTCATGCAGCAAACACCTG...TTGACTGGGACAGGAAAGCAGAGTCCTAAGGAGAGGACTCCTAAGGTTACCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| 3UTR-3UTR GCA 90 bp | GGCAGAGACAGGAGAATCATCTGGAAGCTTTCCAGCCAGCTAGCCGGGAGTACATTCTCCACACATGTATaGATGTACCACACATTTATG | + |
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Preference number: 2 (lower is better) Translates to: GRDRRIIWKLSSQLAGSTFSTHV*MYHTFM Trigger: CATAAATGTGTGGTACATGCATACATGTGTGGAGAA...TGTACTCCCGGCTAGCTGGCTGGAAAGCTTCCAGATGATTCTCCTGTCTCTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| 3UTR-3UTR TCA 90 bp | AACTTAATTTGCTTTATTTTGTTTGGACCCAGTGTCTCACTGCGTAGCTGTGGCCCTGTCCTCAAAAGCTaGGGTCTGAGAAGCAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: NLICFILFGPSVSLRSCGPVLKS*GLRSSV Trigger: CACACTGCTTCTCAGACCTCAGCTTTTGAGGACAGG...GCCACAGCTACGCAGTGAGACACTGGGTCCAAACAAAATAAAGCAAATTAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064129.14 |
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| 3UTR-3UTR GCA 90 bp | CAACACTTGAGAGGCAGAGGCAAGTGGATTGCTGTGAGTTCAAGGCTGGTTTGGGCAAAAATGAGACTCTaGCTCAAAACAAAGCAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: QHLRGRGKWIAVSSRLVWAKMRL*LKTKQK Trigger: CTTCTGCTTTGTTTTGAGGCAGAGTCTCATTTTTGC...CCAAACCAGCCTTGAACTCACAGCAATCCACTTGCCTCTGCCTCTCAAGTGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| 3UTR-3UTR TCA 90 bp | CAACACTTGAGAGGCAGAGGCAAGTGGATTGCTGTGAGTTCAAGGCTGGTTTGGCACATTTATGCAAAATaGCAGGTCTATCATAAGCCT | + |
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Preference number: 2 (lower is better) Translates to: QHLRGRGKWIAVSSRLVWHIYAK*QVYHKP Trigger: AGGCTTATGATAGACCTGTCATTTTGCATAAATGTG...CCAAACCAGCCTTGAACTCACAGCAATCCACTTGCCTCTGCCTCTCAAGTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| 3UTR-3UTR TCA 90 bp | GAACCAATTCCCAAAAAGTTCTCCTCTGACCTCCACACATCCATGGCATGCCTTAATGTGGGAAGTGACTaGGGAAGATACCTGATATCA | + |
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Preference number: 2 (lower is better) Translates to: EPIPKKFSSDLHTSMACLNVGSD*GRYLIS Trigger: TGATATCAGGTATCTTCCTCAGTCACTTCCCACATT...AAGGCATGCCATGGATGTGTGGAGGTCAGAGGAGAACTTTTTGGGAATTGGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGGTAACCTTAGGAGTCCTCTCCTTAGGACTCTGCTTTCCTGTCCCAGTCAATTAAAATGTGGGAAGTaGCTGAGGAAGATACCTGAT | + |
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Preference number: 2 (lower is better) Translates to: SGNLRSPLLRTLLSCPSQLKCGK*LRKIPD Trigger: ATCAGGTATCTTCCTCAGTCACTTCCCACATTTTAA...TTGACTGGGACAGGAAAGCAGAGTCCTAAGGAGAGGACTCCTAAGGTTACCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAAAGGACCTCACATTGTGGGAAGTATACAAATGGGGGCTAGGGAGATGACTGCCTGGTATATTATTTaGTCCAGGTGTTTGCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: QKGPHIVGSIQMGAREMTAWYII*SRCLLH Trigger: ATGCAGCAAACACCTGGAGCAAATAATATACCAGGC...AGTCATCTCCCTAGCCCCCATTTGTATACTTCCCACAATGTGAGGTCCTTTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGGTAACCTTAGGAGTCCTCTCCTTAGGACTCTGCTTTCCTGTCCCAGTCAATGTACCACACATTTATaGAAAATGACAGGTCTATCA | + |
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Preference number: 2 (lower is better) Translates to: SGNLRSPLLRTLLSCPSQCTTHL*KMTGLS Trigger: TGATAGACCTGTCATTTTGCATAAATGTGTGGTACA...TTGACTGGGACAGGAAAGCAGAGTCCTAAGGAGAGGACTCCTAAGGTTACCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| 3UTR CAA 90 bp | CTTAAACATCACAGTGTAAAACAAGTACCCGTATGTGTGAAGGCTTaGGCCACACTGGTAAAAATGCTGTCTTTGCTTCTGCACAGATAT | + |
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Preference number: 2 (lower is better) Translates to: LKHHSVKQVPVCVKA*ATLVKMLSLLLHRY Trigger: ATATCTGTGCAGAAGCAAAGACAGCATTTTTACCAGTGTGGCCAAAGCCTTCACACATACGGGTACTTGTTTTACACTGTGATGTTTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064129.14 |
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| 3UTR-3UTR GCA 90 bp | AGAAGGAGAGAACCAATTCCCAAAAAGTTCTCCTCTGACCTCCACACATCCATGATGCATGTGTATGTGTaGACAGACACTAAAATAGTT | + |
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Preference number: 2 (lower is better) Translates to: RRREPIPKKFSSDLHTSMMHVYV*TDTKIV Trigger: AACTATTTTAGTGTCTGTGCACACATACACATGCAT...CATGGATGTGTGGAGGTCAGAGGAGAACTTTTTGGGAATTGGTTCTCTCCTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| 3UTR TCA 72 bp | AGGAGCAAGAGCAGTGACCAGAAGGAAGCGGCACCATaGGAACCCTGGTGTATGAAGAAGACACGCCCACCC | + |
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Preference number: 3 (lower is better) Translates to: RSKSSDQKEAAP*EPWCMKKTRPP Trigger: GGGTGGGCGTGTCTTCTTCATACACCAGGGTTCTCATGGTGCCGCTTCCTTCTGGTCACTGCTCTTGCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| 3UTR CCA 72 bp | CTTTGCTTCTGCACAGATATTCTTGTGCAATCCTACTaGAGCACCAGGTGGACCCCAAGGAAGGGCAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: LCFCTDILVQSY*STRWTPRKGRA Trigger: TGCCCTGCCCTTCCTTGGGGTCCACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
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| 3UTR GCA 72 bp | AGGGCAGGGGAGGTGATCTTTAGAAATGTTTCCAGGTaGTCTGTCCAGCTAGCTGTCTGTTCATCGTGCAGC | + |
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Preference number: 3 (lower is better) Translates to: RAGEVIFRNVSR*SVQLAVCSSCS Trigger: GCTGCACGATGAACAGACAGCTAGCTGGACAGAGCACCTGGAAACATTTCTAAAGATCACCTCCCCTGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
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| 3UTR GCA 72 bp | AGTGTCTCACTGCGTAGCTGTGGCTGTCCTGGAATTTaGAATGACTCAGATGCTAGGAACCCCTGTCCTCAA | + |
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Preference number: 3 (lower is better) Translates to: SVSLRSCGCPGI*NDSDARNPCPQ Trigger: TTGAGGACAGGGGTTCCTAGCATCTGAGTCATTGCAAATTCCAGGACAGCCACAGCTACGCAGTGAGACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064129.14 |
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| 3UTR CCA 72 bp | TTCCCAAAAAGTTCTCCTCTGACCTCCACACATCCATaGCATGCCTTTCCCTCTTCCCATCACAGGCAAACA | + |
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Preference number: 3 (lower is better) Translates to: FPKSSPLTSTHP*HAFPSSHHRQT Trigger: TGTTTGCCTGTGATGGGAAGAGGGAAAGGCATGCCATGGATGTGTGGAGGTCAGAGGAGAACTTTTTGGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| 3UTR TCA 72 bp | ATGACTCAGATGCTAGGAACCCCTGTCCTCAAAAGCTaGGGTCTGAGAAGCAGTGTGGCCTTTAATAGCATG | + |
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Preference number: 3 (lower is better) Translates to: MTQMLGTPVLKS*GLRSSVAFNSM Trigger: CATGCTATTAAAGGCCACACTGCTTCTCAGACCTCAGCTTTTGAGGACAGGGGTTCCTAGCATCTGAGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064129.14 |
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| 3UTR TCA 72 bp | CAGAAGGAGAGAACCAATTCCCAAAAAGTTCTCCTCTaGCCTCCACACATCCATGGCATGCCTTTCCCTCTT | + |
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Preference number: 3 (lower is better) Translates to: QKERTNSQKVLL*PPHIHGMPFPL Trigger: AAGAGGGAAAGGCATGCCATGGATGTGTGGAGGTCAGAGGAGAACTTTTTGGGAATTGGTTCTCTCCTTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| 3UTR GCA 72 bp | AAAAATGCTGTCTTTGCTTCTGCACAGATATTCTTGTaGAATCCTACTGGAGCACCAGGTGGACCCCAAGGA | + |
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Preference number: 3 (lower is better) Translates to: KNAVFASAQIFL*NPTGAPGGPQG Trigger: TCCTTGGGGTCCACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAGACAGCATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
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| 3UTR CCA 72 bp | GATTCACTGAGTACATTTGTAATCCTTCCCAGAGGATaGAGGCAGAGACAGGAGAATCATCTGGAAGCTTTC | + |
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Preference number: 3 (lower is better) Translates to: DSLSTFVILPRG*RQRQENHLEAF Trigger: GAAAGCTTCCAGATGATTCTCCTGTCTCTGCCTCCATCCTCTGGGAAGGATTACAAATGTACTCAGTGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| 3UTR-3UTR CAA 90 bp | TTCCCTCCTCCAGTACACACACACACACACATATATATATATATACATACATACAGAAAGGACCTCACATaGTGGGAAGTATACAAATGG | + |
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Preference number: 3 (lower is better) Translates to: FPPPVHTHTHIYIYIHTYRKDLT*WEVYKW Trigger: CCATTTGTATACTTCCCACAATGTGAGGTCCTTTCT...GTATGTATGTATATATATATATATGTGTGTGTGTGTGTGTACTGGAGGAGGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| CDS-3UTR GCA 90 bp | TTGTGCAATCCTACTGGAGCACCAGGTGGACCCCAAGGAAGGGCAGGGCAGGGGGGTCCAGGGCTGTCATaGACTGGTCCAGGGCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: LCNPTGAPGGPQGRAGQGGPGLS*TGPGPH Trigger: ATGAGGCCCTGGACCAGTGCATGACAGCCCTGGACC...CCCCTGCCCTGCCCTTCCTTGGGGTCCACCTGGTGCTCCAGTAGGATTGCACAA 62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
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| CDS-3UTR CCA 90 bp | TTGTGCAATCCTACTGGAGCACCAGGTGGACCCCAAGGAAGGGCAGGGCAGGGGTGCTTCCAGTGCTGCTaGGCCTCGCAGCACTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: LCNPTGAPGGPQGRAGQGCFQCC*ASQHSS Trigger: TGAGGAGTGCTGCGAGGCCCAGCAGCACTGGAAGCA...CCCCTGCCCTGCCCTTCCTTGGGGTCCACCTGGTGCTCCAGTAGGATTGCACAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
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| CDS-3UTR CCA 90 bp | TCTTGTGCAATCCTACTGGAGCACCAGGTGGACCCCAAGGAAGGGCAGGGCAGGTGGTCCAGGGCCTCATaGAGGCTGCTCACAGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: SCAILLEHQVDPKEGQGRWSRAS*RLLTGD Trigger: GTCTCCTGTGAGCAGCCTCCATGAGGCCCTGGACCA...CCTGCCCTGCCCTTCCTTGGGGTCCACCTGGTGCTCCAGTAGGATTGCACAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
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| CDS-3UTR CCA 90 bp | TGTGCAATCCTACTGGAGCACCAGGTGGACCCCAAGGAAGGGCAGGGCAGGGGAGCAGCCTCAGAATCCTaGTGGGAAGCATGGACAGCG | + |
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Preference number: 4 (lower is better) Translates to: CAILLEHQVDPKEGQGRGAASES*WEAWTA Trigger: CGCTGTCCATGCTTCCCACCAGGATTCTGAGGCTGC...TCCCCTGCCCTGCCCTTCCTTGGGGTCCACCTGGTGCTCCAGTAGGATTGCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
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| CDS-3UTR CCA 90 bp | TGTGCAATCCTACTGGAGCACCAGGTGGACCCCAAGGAAGGGCAGGGCAGGGGAGGAAGATGGCGCCCTTaGGGTATCGGTTCAGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: CAILLEHQVDPKEGQGRGGRWRP*GIGSGR Trigger: CCTACCTGAACCGATACCCCAAGGGCGCCATCTTCC...TCCCCTGCCCTGCCCTTCCTTGGGGTCCACCTGGTGCTCCAGTAGGATTGCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
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| CDS-3UTR GCA 90 bp | TGTGCAATCCTACTGGAGCACCAGGTGGACCCCAAGGAAGGGCAGGGCAGGGGAACCAGGAGTTCTCCTTaGTCAGCAGGTCGGCGTAGA | + |
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Preference number: 4 (lower is better) Translates to: CAILLEHQVDPKEGQGRGTRSSP*SAGRRR Trigger: TCTACGCCGACCTGCTGAGCAAGGAGAACTCCTGGT...TCCCCTGCCCTGCCCTTCCTTGGGGTCCACCTGGTGCTCCAGTAGGATTGCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
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| CDS-3UTR CCA 90 bp | TTGTGCAATCCTACTGGAGCACCAGGTGGACCCCAAGGAAGGGCAGGGCAGGGGGGTCGAAGGTCATCATaGCCTGCATCTCCAGGATGG | + |
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Preference number: 4 (lower is better) Translates to: LCNPTGAPGGPQGRAGQGGRRSS*PASPGW Trigger: CCATCCTGGAGATGCAGGCCATGATGACCTTCGACC...CCCCTGCCCTGCCCTTCCTTGGGGTCCACCTGGTGCTCCAGTAGGATTGCACAA 60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
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| CDS-3UTR TCA 90 bp | TTGTGCAATCCTACTGGAGCACCAGGTGGACCCCAAGGAAGGGCAGGGCAGGGGCCTTCCCAAACATGCTaGGGTAGGCAGCCTTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: LCNPTGAPGGPQGRAGQGPSQTC*GRQPSC Trigger: ACATGAAGGCTGCCTACCTCAGCATGTTTGGGAAGG...CCCCTGCCCTGCCCTTCCTTGGGGTCCACCTGGTGCTCCAGTAGGATTGCACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR GCA 90 bp | AGGGCAGGGGAGGTGATCTTTAGAAATGTTTCCAGGTGCTCTGTCCAGCTAGCTGGGCCTCATGGAGGCTaGTCACAGGAGACCCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RAGEVIFRNVSRCSVQLAGPHGG*SQETPP Trigger: CGGCGGGGTCTCCTGTGAGCAGCCTCCATGAGGCCC...AGCTAGCTGGACAGAGCACCTGGAAACATTTCTAAAGATCACCTCCCCTGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064129.14 |
||
| CDS-3UTR CCA 90 bp | TGTGCAATCCTACTGGAGCACCAGGTGGACCCCAAGGAAGGGCAGGGCAGGGGACAAAGAACAGGAAGATaGCGCCCTTGGGGTATCGGT | + |
|
Preference number: 4 (lower is better) Translates to: CAILLEHQVDPKEGQGRGQRTGR*RPWGIG Trigger: ACCGATACCCCAAGGGCGCCATCTTCCTGTTCTTTG...TCCCCTGCCCTGCCCTTCCTTGGGGTCCACCTGGTGCTCCAGTAGGATTGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR TCA 90 bp | CCAAGGAAGGGCAGGGCAGGGGAGGTGATCTTTAGAAATGTTTCCAGGTGCTCTCCAGCATCCCATCCGTaGGTGTCGGCTGCTTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PRKGRAGEVIFRNVSRCSPASHP*VSAASQ Trigger: TTGGGAAGCAGCCGACACTCACGGATGGGATGCTGG...AGAGCACCTGGAAACATTTCTAAAGATCACCTCCCCTGCCCTGCCCTTCCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR GCA 90 bp | CAGAAAGGACCTCACATTGTGGGAAGTATACAAATGGGGGCTAGGGAGATGACTGGGCCTCATGGAGGCTaGTCACAGGAGACCCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QKGPHIVGSIQMGAREMTGPHGG*SQETPP Trigger: CGGCGGGGTCTCCTGTGAGCAGCCTCCATGAGGCCC...AGTCATCTCCCTAGCCCCCATTTGTATACTTCCCACAATGTGAGGTCCTTTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGCAGGGGAGGTGATCTTTAGAAATGTTTCCAGGTGCTCTGTCCAGCTAGGTCCAGGGCTGTCATaGACTGGTCCAGGGCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GRAGEVIFRNVSRCSVQLGPGLS*TGPGPH Trigger: ATGAGGCCCTGGACCAGTGCATGACAGCCCTGGACC...TAGCTGGACAGAGCACCTGGAAACATTTCTAAAGATCACCTCCCCTGCCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CCA 90 bp | TGTGCAATCCTACTGGAGCACCAGGTGGACCCCAAGGAAGGGCAGGGCAGGGGAAGTGCTTCTGAGAACTaGTTGGTAAGGAAGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CAILLEHQVDPKEGQGRGSASEN*LVRKRS Trigger: GGACCTCTTCCTTACCAACCAGTTCTCAGAAGCACT...TCCCCTGCCCTGCCCTTCCTTGGGGTCCACCTGGTGCTCCAGTAGGATTGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGGTGGACCCCAAGCCAGCATCCCATCCGTaGGTGTCGGCTGCTTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLHRYSCAILLEHQVDPKPASHP*VSAASQ Trigger: TTGGGAAGCAGCCGACACTCACGGATGGGATGCTGG...CTTGGGGTCCACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR TCA 90 bp | TCTTGTGCAATCCTACTGGAGCACCAGGTGGACCCCAAGGAAGGGCAGGGCAGGCAGACTCTAAGAGTTTaGTGGCCTCCTCATTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SCAILLEHQVDPKEGQGRQTLRV*WPPHFC Trigger: GCAGAAATGAGGAGGCCATCAAACTCTTAGAGTCTG...CCTGCCCTGCCCTTCCTTGGGGTCCACCTGGTGCTCCAGTAGGATTGCACAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGGTGGACCCCAAGAACTGCTTCCAGTGCTaGTGGGCCTCGCAGCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLHRYSCAILLEHQVDPKNCFQC*WASQHS Trigger: GGAGTGCTGCGAGGCCCAGCAGCACTGGAAGCAGTT...CTTGGGGTCCACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR GCA 90 bp | TGCTCTGTCCAGCTAGCTGTCTGTTCATCGTGCAGCCCAAGAGTGCTGCAGAAAGGGCCTCATGGAGGCTaGTCACAGGAGACCCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: CSVQLAVCSSCSPRVLQKGPHGG*SQETLY Trigger: GTAAAGGGTCTCCTGTGAGCAGCCTCCATGAGGCCC...TTTCTGCAGCACTCTTGGGCTGCACGATGAACAGACAGCTAGCTGGACAGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106618.8 |
||
| CDS-3UTR CCA 90 bp | AGACTGTGTGCTTGTGTAATCCCCACTGTGGTAGGGAGACCTGTCTCTGACTTGTGGTCCAGGGCCTCATaGAGGCTGCTCACAGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RLCACVIPTVVGRPVSDLWSRAS*RLLTGD Trigger: GTCTCCTGTGAGCAGCCTCCATGAGGCCCTGGACCA...CAAGTCAGAGACAGGTCTCCCTACCACAGTGGGGATTACACAAGCACACAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGTTTGGACCCAGTGTCTCACTGCGTAGCTGTGGCTGTCCTGGAATTTGCAGCAAGGAGATGGGGTTaGGGGAGAGGTAGCGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FCLDPVSHCVAVAVLEFAARRWG*GRGSAW Trigger: CCAGGCGCTACCTCTCCCCCAACCCCATCTCCTTGC...TGCAAATTCCAGGACAGCCACAGCTACGCAGTGAGACACTGGGTCCAAACAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064129.14 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGCAGGGGAGGTGATCTTTAGAAATGTTTCCAGGTGCTCTGTCCAGCTAGCAGTCGTCATCTGCTaGGTACTCATTCTCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRAGEVIFRNVSRCSVQLAVVIC*VLILWA Trigger: GGCCCAGAGAATGAGTACTCAGCAGATGACGACTGC...TAGCTGGACAGAGCACCTGGAAACATTTCTAAAGATCACCTCCCCTGCCCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR TCA 90 bp | CCAAGGAAGGGCAGGGCAGGGGAGGTGATCTTTAGAAATGTTTCCAGGTGCTCTGCAGTCGTCATCTGCTaGGTACTCATTCTCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PRKGRAGEVIFRNVSRCSAVVIC*VLILWA Trigger: GGCCCAGAGAATGAGTACTCAGCAGATGACGACTGC...AGAGCACCTGGAAACATTTCTAAAGATCACCTCCCCTGCCCTGCCCTTCCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGAGACAGGAGAATCATCTGGAAGCTTTCCAGCCAGCTAGCCGGGAGTACAAAGGTCATCATGGCCTaGATCTCCAGGATGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRDRRIIWKLSSQLAGSTKVIMA*ISRMVA Trigger: TGCCACCATCCTGGAGATGCAGGCCATGATGACCTT...TGTACTCCCGGCTAGCTGGCTGGAAAGCTTCCAGATGATTCTCCTGTCTCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
||
| CDS-3UTR GCA 90 bp | ATTTTGTTTGGACCCAGTGTCTCACTGCGTAGCTGTGGCTGTCCTGGAATTTGCAACTGCTTCCAGTGCTaGTGGGCCTCGCAGCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: ILFGPSVSLRSCGCPGICNCFQC*WASQHS Trigger: GGAGTGCTGCGAGGCCCAGCAGCACTGGAAGCAGTT...GCAAATTCCAGGACAGCCACAGCTACGCAGTGAGACACTGGGTCCAAACAAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064129.14 |
||
| CDS-3UTR GCA 90 bp | CCAAGGAAGGGCAGGGCAGGGGAGGTGATCTTTAGAAATGTTTCCAGGTGCTCTACCAGGAGTTCTCCTTaGTCAGCAGGTCGGCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PRKGRAGEVIFRNVSRCSTRSSP*SAGRRR Trigger: TCTACGCCGACCTGCTGAGCAAGGAGAACTCCTGGT...AGAGCACCTGGAAACATTTCTAAAGATCACCTCCCCTGCCCTGCCCTTCCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR GCA 90 bp | TGCTCTGTCCAGCTAGCTGTCTGTTCATCGTGCAGCCCAAGAGTGCTGCAGAAACCTGAAATTCTCCTCTaGCTCCTGGATTCGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CSVQLAVCSSCSPRVLQKPEILL*LLDSAQ Trigger: CTGGGCCGAATCCAGGAGGCAGAGGAGAATTTCAGG...TTTCTGCAGCACTCTTGGGCTGCACGATGAACAGACAGCTAGCTGGACAGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAGGTGCTCTGTCCAGCTAGCTGTCTGTTCATCGTGCAGCCCAAGAGTGCTGCATCTCCAGGATGGTaGCATACGTCAGGGAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FQVLCPASCLFIVQPKSAASPGW*HTSGSD Trigger: ATCACTCCCTGACGTATGCCACCATCCTGGAGATGC...AGCACTCTTGGGCTGCACGATGAACAGACAGCTAGCTGGACAGAGCACCTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CCA 90 bp | CCAGAGGATGGAGGCAGAGACAGGAGAATCATCTGGAAGCTTTCCAGCCAGCTACCTGCATCTCCAGGATaGTGGCATACGTCAGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PEDGGRDRRIIWKLSSQLPASPG*WHTSGS Trigger: ACTCCCTGACGTATGCCACCATCCTGGAGATGCAGG...TAGCTGGCTGGAAAGCTTCCAGATGATTCTCCTGTCTCTGCCTCCATCCTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGCAGGGGAGGTGATCTTTAGAAATGTTTCCAGGTGCTCTGTCCAGCTAGGTCGAAGGTCATCATaGCCTGCATCTCCAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: GRAGEVIFRNVSRCSVQLGRRSS*PASPGW Trigger: CCATCCTGGAGATGCAGGCCATGATGACCTTCGACC...TAGCTGGACAGAGCACCTGGAAACATTTCTAAAGATCACCTCCCCTGCCCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCTGTCCAGCTAGCTGTCTGTTCATCGTGCAGCCCAAGAGTGCTGCAGAAAGCCTCAGAATCCTGGTaGGAAGCATGGACAGCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CSVQLAVCSSCSPRVLQKASESW*EAWTAS Trigger: TGACGCTGTCCATGCTTCCCACCAGGATTCTGAGGC...TTTCTGCAGCACTCTTGGGCTGCACGATGAACAGACAGCTAGCTGGACAGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCAGGGGAGGTGATCTTTAGAAATGTTTCCAGGTGCTCTGTCCAGCTAGCTGCAGCCTCAGAATCCTaGTGGGAAGCATGGACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RAGEVIFRNVSRCSVQLAAASES*WEAWTA Trigger: CGCTGTCCATGCTTCCCACCAGGATTCTGAGGCTGC...AGCTAGCTGGACAGAGCACCTGGAAACATTTCTAAAGATCACCTCCCCTGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
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| CDS-3UTR CCA 90 bp | CTGTCTTTGCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGGTGGCAAGGAGATGGGGTTaGGGGAGAGGTAGCGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLLLHRYSCAILLEHQVARRWG*GRGSAW Trigger: CCAGGCGCTACCTCTCCCCCAACCCCATCTCCTTGC...CACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR TCA 90 bp | TGCTCTGTCCAGCTAGCTGTCTGTTCATCGTGCAGCCCAAGAGTGCTGCAGAAACCTTCCCAAACATGCTaGGGTAGGCAGCCTTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: CSVQLAVCSSCSPRVLQKPSQTC*GRQPSC Trigger: ACATGAAGGCTGCCTACCTCAGCATGTTTGGGAAGG...TTTCTGCAGCACTCTTGGGCTGCACGATGAACAGACAGCTAGCTGGACAGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR GCA 90 bp | CCAAGGAAGGGCAGGGCAGGGGAGGTGATCTTTAGAAATGTTTCCAGGTGCTCTAAGGTCATCATGGCCTaGATCTCCAGGATGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PRKGRAGEVIFRNVSRCSKVIMA*ISRMVA Trigger: TGCCACCATCCTGGAGATGCAGGCCATGATGACCTT...AGAGCACCTGGAAACATTTCTAAAGATCACCTCCCCTGCCCTGCCCTTCCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR GCA 90 bp | ACCCCAAGGAAGGGCAGGGCAGGGGAGGTGATCTTTAGAAATGTTTCCAGGTGCATTCTCTGGGCCCATTaGCAGCATCTCTTCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TPRKGRAGEVIFRNVSRCILWAH*QHLFSL Trigger: AAGGCTGAAGAGATGCTGGCAATGGGCCCAGAGAAT...GCACCTGGAAACATTTCTAAAGATCACCTCCCCTGCCCTGCCCTTCCTTGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR GCA 90 bp | CAGAAAGGACCTCACATTGTGGGAAGTATACAAATGGGGGCTAGGGAGATGACTGGAGAGCTTCCTACCTaGAGGAAGGTCAGGGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: QKGPHIVGSIQMGAREMTGELPT*RKVRAA Trigger: AGCGGCCCTGACCTTCCTGCAGGTAGGAAGCTCTCC...AGTCATCTCCCTAGCCCCCATTTGTATACTTCCCACAATGTGAGGTCCTTTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
||
| CDS-3UTR CCA 90 bp | TGTCTTTGCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGGTGGAGGGCTGTCATGCACTaGTCCAGGGCCTCATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLCFCTDILVQSYWSTRWRAVMH*SRASWR Trigger: CCTCCATGAGGCCCTGGACCAGTGCATGACAGCCCT...CCACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CCA 90 bp | TGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGGTGGACCCCAAGGAAGCCTGCATCTCCAGGATaGTGGCATACGTCAGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CTDILVQSYWSTRWTPRKPASPG*WHTSGS Trigger: ACTCCCTGACGTATGCCACCATCCTGGAGATGCAGG...CTTCCTTGGGGTCCACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CCA 90 bp | AATGTTTCCAGGTGCTCTGTCCAGCTAGCTGTCTGTTCATCGTGCAGCCCAAGAGCAAGCAGGATGTCCTaGGGGTCGAAGGTCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: NVSRCSVQLAVCSSCSPRASRMS*GSKVIM Trigger: CATGATGACCTTCGACCCCCAGGACATCCTGCTTGC...TCTTGGGCTGCACGATGAACAGACAGCTAGCTGGACAGAGCACCTGGAAACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CCA 90 bp | AGACTGTGTGCTTGTGTAATCCCCACTGTGGTAGGGAGACCTGTCTCTGACTTGGCAAGCAGGATGTCCTaGGGGTCGAAGGTCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: RLCACVIPTVVGRPVSDLASRMS*GSKVIM Trigger: CATGATGACCTTCGACCCCCAGGACATCCTGCTTGC...CAAGTCAGAGACAGGTCTCCCTACCACAGTGGGGATTACACAAGCACACAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGCAGGGGAGGTGATCTTTAGAAATGTTTCCAGGTGCTCTGTCCAGCTAAGATGTAGGTGGCCTTaGACCAGGAGTTCTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GRAGEVIFRNVSRCSVQLRCRWP*TRSSPC Trigger: GCAAGGAGAACTCCTGGTCCAAGGCCACCTACATCT...TAGCTGGACAGAGCACCTGGAAACATTTCTAAAGATCACCTCCCCTGCCCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAGGTGCTCTGTCCAGCTAGCTGTCTGTTCATCGTGCAGCCCAAGAGTGCTATCTGGCCTGGAGTGTaGCTGCCTGGATTCGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FQVLCPASCLFIVQPKSAIWPGV*LPGFEN Trigger: ATTTTCGAATCCAGGCAGCCACACTCCAGGCCAGAT...AGCACTCTTGGGCTGCACGATGAACAGACAGCTAGCTGGACAGAGCACCTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CCA 90 bp | TGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGGTGGACCCCAAGGAAGCTTCTAGGGAAGATCTaGCCTGGAGTGTGGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CTDILVQSYWSTRWTPRKLLGKI*PGVWLP Trigger: AGGCAGCCACACTCCAGGCCAGATCTTCCCTAGAAG...CTTCCTTGGGGTCCACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGGAGAGAACCAATTCCCAAAAAGTTCTCCTCTGACCTCCACACATCCATGGGTCCAGGGCTGTCATaGACTGGTCCAGGGCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RRREPIPKKFSSDLHTSMGPGLS*TGPGPH Trigger: ATGAGGCCCTGGACCAGTGCATGACAGCCCTGGACC...CATGGATGTGTGGAGGTCAGAGGAGAACTTTTTGGGAATTGGTTCTCTCCTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
||
| CDS-3UTR GCA 90 bp | GACAGGAGAATCATCTGGAAGCTTTCCAGCCAGCTAGCCGGGAGTACACAGCTCTCAGGGAGTGATACATaGTCTCCTTGGTTCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: DRRIIWKLSSQLAGSTQLSGSDT*SPWFWV Trigger: AACCCAGAACCAAGGAGAGCATGTATCACTCCCTGA...GAGCTGTGTACTCCCGGCTAGCTGGCTGGAAAGCTTCCAGATGATTCTCCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGTGTTTGCTGCATGAATCAAGCAAAGCAGATCTGTGACAATGCCTGTGTCGGGACTGATCCAGAATaGTCTCTGCCCAGGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGVCCMNQAKQICDNACVGTDPE*SLPRCG Trigger: CCCACACCTGGGCAGAGAGCATTCTGGATCAGTCCC...GACACAGGCATTGTCACAGATCTGCTTTGCTTGATTCATGCAGCAAACACCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
||
| CDS-3UTR CCA 90 bp | ATGCTGTCTTTGCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGAGGGCTGTCATGCACTaGTCCAGGGCCTCATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: MLSLLLHRYSCAILLEHQRAVMH*SRASWR Trigger: CCTCCATGAGGCCCTGGACCAGTGCATGACAGCCCT...CTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAGACAGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGATCTGTGACAATGCCTGTGTCCACGTGAGTCTTGACAGGAGCAAGAGCGCATCTCCAGGATGGTaGCATACGTCAGGGAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KQICDNACVHVSLDRSKSASPGW*HTSGSD Trigger: ATCACTCCCTGACGTATGCCACCATCCTGGAGATGC...GCTCTTGCTCCTGTCAAGACTCACGTGGACACAGGCATTGTCACAGATCTGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGGTGGACCCCAATACCGAGCACGAAGGTaGGGAAGGTGTGATAACACA | + |
|
Preference number: 4 (lower is better) Translates to: ASAQIFLCNPTGAPGGPQYRARR*GRCDNT Trigger: TGTGTTATCACACCTTCCTCACCTTCGTGCTCGGTA...TTGGGGTCCACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGGTGGACCCCAATGGCAGAAATGCTCCTaGAATTCTCCTCTGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ASAQIFLCNPTGAPGGPQWQKCS*NSPLPP Trigger: AGGAGGCAGAGGAGAATTTCAGGAGCATTTCTGCCA...TTGGGGTCCACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR GCA 90 bp | TTTGCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGGTGGACCCAAGGTCATCATGGCCTaGATCTCCAGGATGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FASAQIFLCNPTGAPGGPKVIMA*ISRMVA Trigger: TGCCACCATCCTGGAGATGCAGGCCATGATGACCTT...GGGTCCACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR GCA 90 bp | TGCTCTGTCCAGCTAGCTGTCTGTTCATCGTGCAGCCCAAGAGTGCTGCAGAAACTTCAGCAGCTTCTCTaGCTCCTCGATGTTGACATT | + |
|
Preference number: 4 (lower is better) Translates to: CSVQLAVCSSCSPRVLQKLQQLL*LLDVDI Trigger: AATGTCAACATCGAGGAGGCAGAGAAGCTGCTGAAG...TTTCTGCAGCACTCTTGGGCTGCACGATGAACAGACAGCTAGCTGGACAGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR GCA 90 bp | TTTGCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGGTGGACCCGGCCTGGAGTGTGGCTaGCTGGATTCGAAAATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FASAQIFLCNPTGAPGGPGLECG*LDSKMC Trigger: ACACATTTTCGAATCCAGGCAGCCACACTCCAGGCC...GGGTCCACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAAGGACCTCACATTGTGGGAAGTATACAAATGGGGGCTAGGGAGATGACTGGTCGAAGGTCATCATaGCCTGCATCTCCAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: QKGPHIVGSIQMGAREMTGRRSS*PASPGW Trigger: CCATCCTGGAGATGCAGGCCATGATGACCTTCGACC...AGTCATCTCCCTAGCCCCCATTTGTATACTTCCCACAATGTGAGGTCCTTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGGTGGACCCCAAATCTGGCCTGGAGTGTaGCTGCCTGGATTCGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ASAQIFLCNPTGAPGGPQIWPGV*LPGFEN Trigger: ATTTTCGAATCCAGGCAGCCACACTCCAGGCCAGAT...TTGGGGTCCACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR TCA 90 bp | AATGTTTCCAGGTGCTCTGTCCAGCTAGCTGTCTGTTCATCGTGCAGCCCAAGAGTAGCTGAGTGCTTCTaGGAACTGGTTGGTAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NVSRCSVQLAVCSSCSPRVAECF*ELVGKE Trigger: TTCCTTACCAACCAGTTCTCAGAAGCACTCAGCTAC...TCTTGGGCTGCACGATGAACAGACAGCTAGCTGGACAGAGCACCTGGAAACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR TCA 90 bp | TGTCTTTGCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGGTGGATTTCCCAGCAATCTTaGGCTTCAAGCCTGGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: CLCFCTDILVQSYWSTRWISQQS*ASSLAR Trigger: CCGTGCCAGGCTTGAAGCTCAAGATTGCTGGGAAAT...CCACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR TCA 90 bp | ACCCCAAGGAAGGGCAGGGCAGGGGAGGTGATCTTTAGAAATGTTTCCAGGTGCTCGAAAATGTGTCCTTaGCTCCATGGAGTAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TPRKGRAGEVIFRNVSRCSKMCP*LHGVVL Trigger: AAGAACTACTCCATGGAGTCAAGGACACATTTTCGA...GCACCTGGAAACATTTCTAAAGATCACCTCCCCTGCCCTGCCCTTCCTTGGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGCAGGGGAGGTGATCTTTAGAAATGTTTCCAGGTGCTCTGTCCAGCTACTTCTTTCATCATGTTaGCAGCAAGCAGGATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GRAGEVIFRNVSRCSVQLLLSSC*QQAGCP Trigger: AGGACATCCTGCTTGCTGGCAACATGATGAAAGAAG...TAGCTGGACAGAGCACCTGGAAACATTTCTAAAGATCACCTCCCCTGCCCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR GCA 90 bp | GCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGGTGGACCCCAACTTCAGCAGCTTCTCTaGCTCCTCGATGTTGACATT | + |
|
Preference number: 4 (lower is better) Translates to: ASAQIFLCNPTGAPGGPQLQQLL*LLDVDI Trigger: AATGTCAACATCGAGGAGGCAGAGAAGCTGCTGAAG...TTGGGGTCCACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR GCA 90 bp | TTTGCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGGTGGACCCATTCTCTGGGCCCATTaGCAGCATCTCTTCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FASAQIFLCNPTGAPGGPILWAH*QHLFSL Trigger: AAGGCTGAAGAGATGCTGGCAATGGGCCCAGAGAAT...GGGTCCACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTTGCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGGTGGAGGCCTGGAGTGTGGCTaGCTGGATTCGAAAATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VFASAQIFLCNPTGAPGGGLECG*LDSKMC Trigger: ACACATTTTCGAATCCAGGCAGCCACACTCCAGGCC...TCCACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CCA 90 bp | TTAATTTGCTTTATTTTGTTTGGACCCAGTGTCTCACTGCGTAGCTGTGGCTGTTGGTCCAGGGCCTCATaGAGGCTGCTCACAGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LICFILFGPSVSLRSCGCWSRAS*RLLTGD Trigger: GTCTCCTGTGAGCAGCCTCCATGAGGCCCTGGACCA...ACAGCCACAGCTACGCAGTGAGACACTGGGTCCAAACAAAATAAAGCAAATTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064129.14 |
||
| CDS-3UTR CCA 90 bp | AAGCAGATCTGTGACAATGCCTGTGTCCACGTGAGTCTTGACAGGAGCAAGAGCAGTGCTTCTGAGAACTaGTTGGTAAGGAAGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KQICDNACVHVSLDRSKSSASEN*LVRKRS Trigger: GGACCTCTTCCTTACCAACCAGTTCTCAGAAGCACT...GCTCTTGCTCCTGTCAAGACTCACGTGGACACAGGCATTGTCACAGATCTGCTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
||
| CDS-3UTR CCA 90 bp | ATGCTGTCTTTGCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGCCTGCATCTCCAGGATaGTGGCATACGTCAGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: MLSLLLHRYSCAILLEHQPASPG*WHTSGS Trigger: ACTCCCTGACGTATGCCACCATCCTGGAGATGCAGG...CTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAGACAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CCA 90 bp | ATGCTGTCTTTGCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGGCCTCAGAATCCTGGTaGGAAGCATGGACAGCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MLSLLLHRYSCAILLEHQASESW*EAWTAS Trigger: TGACGCTGTCCATGCTTCCCACCAGGATTCTGAGGC...CTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAGACAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCTTTGCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGGTGCAAAGAACAGGAAGATaGCGCCCTTGGGGTATCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLLLHRYSCAILLEHQVQRTGR*RPWGIG Trigger: ACCGATACCCCAAGGGCGCCATCTTCCTGTTCTTTG...CACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCTTTGCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGGTGAGATGTAGGTGGCCTTaGACCAGGAGTTCTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLLLHRYSCAILLEHQVRCRWP*TRSSPC Trigger: GCAAGGAGAACTCCTGGTCCAAGGCCACCTACATCT...CACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCAGGGGAGGTGATCTTTAGAAATGTTTCCAGGTGCTCTGTCCAGCTAGCTTTCATTGTCCCCGAATaGCTTGTAGTCTTCCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RAGEVIFRNVSRCSVQLAFIVPE*LVVFLP Trigger: GGGAAGGAAGACTACAAGCCATTCGGGGACAATGAA...AGCTAGCTGGACAGAGCACCTGGAAACATTTCTAAAGATCACCTCCCCTGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CCA 90 bp | GAACCAATTCCCAAAAAGTTCTCCTCTGACCTCCACACATCCATGGCATGCCTTCCAGGCTTCAGAGTTTaGGAATCTGAACCTCGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EPIPKKFSSDLHTSMACLPGFRV*ESEPRA Trigger: AGCCCGAGGTTCAGATTCCCAAACTCTGAAGCCTGG...AAGGCATGCCATGGATGTGTGGAGGTCAGAGGAGAACTTTTTGGGAATTGGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
||
| 3UTR CAA 72 bp | GTAATCCCCACTGTGGTAGGGAGACCTGTCTCTGACTaGGCCAGACCCAAATTCAAGTCCCAGTTCACTAAT | + |
|
Preference number: 4 (lower is better) Translates to: VIPTVVGRPVSD*ARPKFKSQFTN Trigger: ATTAGTGAACTGGGACTTGAATTTGGGTCTGGCCAAGTCAGAGACAGGTCTCCCTACCACAGTGGGGATTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
||
| CDS-3UTR TCA 90 bp | TGTGAAGGCTTTGGCCACACTGGTAAAAATGCTGTCTTTGCTTCTGCACAGATACTGCCTCCTCGATGTTaGCATTCCCAGTACCGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CEGFGHTGKNAVFASAQILPPRC*HSQYRA Trigger: TGCTCGGTACTGGGAATGTCAACATCGAGGAGGCAG...TATCTGTGCAGAAGCAAAGACAGCATTTTTACCAGTGTGGCCAAAGCCTTCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064129.14 |
||
| CDS-3UTR TCA 90 bp | GAACCAATTCCCAAAAAGTTCTCCTCTGACCTCCACACATCCATGGCATGCCTTCAGAGTTTGGGAATCTaGACCTCGGGCTTTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: EPIPKKFSSDLHTSMACLQSLGI*TSGFVT Trigger: AGTGACAAAGCCCGAGGTTCAGATTCCCAAACTCTG...AAGGCATGCCATGGATGTGTGGAGGTCAGAGGAGAACTTTTTGGGAATTGGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
||
| CDS-3UTR GCA 90 bp | AGGGCAGGGGAGGTGATCTTTAGAAATGTTTCCAGGTGCTCTGTCCAGCTAGCTCTTCTTTCATCATGTTaGCAGCAAGCAGGATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RAGEVIFRNVSRCSVQLALLSSC*QQAGCP Trigger: AGGACATCCTGCTTGCTGGCAACATGATGAAAGAAG...AGCTAGCTGGACAGAGCACCTGGAAACATTTCTAAAGATCACCTCCCCTGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAGATCTGTGACAATGCCTGTGTCCACGTGAGTCTTGACAGGAGCAAGAGCCTTCTTTCATCATGTTaGCAGCAAGCAGGATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KQICDNACVHVSLDRSKSLLSSC*QQAGCP Trigger: AGGACATCCTGCTTGCTGGCAACATGATGAAAGAAG...GCTCTTGCTCCTGTCAAGACTCACGTGGACACAGGCATTGTCACAGATCTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGTTTGGACCCAGTGTCTCACTGCGTAGCTGTGGCTGTCCTGGAATTTGCAAGTGCTTCTGAGAACTaGTTGGTAAGGAAGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FCLDPVSHCVAVAVLEFASASEN*LVRKRS Trigger: GGACCTCTTCCTTACCAACCAGTTCTCAGAAGCACT...TGCAAATTCCAGGACAGCCACAGCTACGCAGTGAGACACTGGGTCCAAACAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064129.14 |
||
| CDS-3UTR CCA 90 bp | TTTTGTTTGGACCCAGTGTCTCACTGCGTAGCTGTGGCTGTCCTGGAATTTGCATTCATTGTCCCCGAATaGCTTGTAGTCTTCCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FCLDPVSHCVAVAVLEFAFIVPE*LVVFLP Trigger: GGGAAGGAAGACTACAAGCCATTCGGGGACAATGAA...TGCAAATTCCAGGACAGCCACAGCTACGCAGTGAGACACTGGGTCCAAACAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064129.14 |
||
| CDS-3UTR TCA 90 bp | CCAGGTGTTTGCTGCATGAATCAAGCAAAGCAGATCTGTGACAATGCCTGTGTCGTAGCTGAGTGCTTCTaGGAACTGGTTGGTAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PGVCCMNQAKQICDNACVVAECF*ELVGKE Trigger: TTCCTTACCAACCAGTTCTCAGAAGCACTCAGCTAC...GACACAGGCATTGTCACAGATCTGCTTTGCTTGATTCATGCAGCAAACACCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
||
| CDS-3UTR TCA 90 bp | AGGGCAGGGGAGGTGATCTTTAGAAATGTTTCCAGGTGCTCTGTCCAGCTAGCTATAGTCCTTGTTTCCTaGAAACCCAACAAACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RAGEVIFRNVSRCSVQLAIVLVS*KPNKLQ Trigger: CTGGAGTTTGTTGGGTTTTCAGGAAACAAGGACTAT...AGCTAGCTGGACAGAGCACCTGGAAACATTTCTAAAGATCACCTCCCCTGCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR TCA 90 bp | ATGCTGTCTTTGCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGTACCGAGCACGAAGGTaGGGAAGGTGTGATAACACA | + |
|
Preference number: 4 (lower is better) Translates to: MLSLLLHRYSCAILLEHQYRARR*GRCDNT Trigger: TGTGTTATCACACCTTCCTCACCTTCGTGCTCGGTA...CTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAGACAGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGGTGGACCCCAAGTCGAAAATGTGTCCTTaGCTCCATGGAGTAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLHRYSCAILLEHQVDPKSKMCP*LHGVVL Trigger: AAGAACTACTCCATGGAGTCAAGGACACATTTTCGA...CTTGGGGTCCACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR GCA 90 bp | CTGTCTTTGCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGGTGTCAGGGAGTGATACATaGTCTCCTTGGTTCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLLLHRYSCAILLEHQVSGSDT*SPWFWV Trigger: AACCCAGAACCAAGGAGAGCATGTATCACTCCCTGA...CACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAGACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGGTGGACCCCAAGTGCATAACAGACCTCTaGATGGATTTCCTCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLHRYSCAILLEHQVDPKCITDL*MDFLFC Trigger: ACAGAAGAGGAAATCCATGCAGAGGTCTGTTATGCA...CTTGGGGTCCACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR GCA 90 bp | CAACACTTGAGAGGCAGAGGCAAGTGGATTGCTGTGAGTTCAAGGCTGGTTTGGTGCATAACAGACCTCTaGATGGATTTCCTCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QHLRGRGKWIAVSSRLVWCITDL*MDFLFC Trigger: ACAGAAGAGGAAATCCATGCAGAGGTCTGTTATGCA...CCAAACCAGCCTTGAACTCACAGCAATCCACTTGCCTCTGCCTCTCAAGTGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTAAAACAAGTACCCGTATGTGTGAAGGCTTTGGCCACACTGGTAAAAATGCCTGAAATTCTCCTCTaGCTCCTGGATTCGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SVKQVPVCVKALATLVKMPEILL*LLDSAQ Trigger: CTGGGCCGAATCCAGGAGGCAGAGGAGAATTTCAGG...CATTTTTACCAGTGTGGCCAAAGCCTTCACACATACGGGTACTTGTTTTACACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064129.14 |
||
| CDS-3UTR CCA 90 bp | AACTTAATTTGCTTTATTTTGTTTGGACCCAGTGTCTCACTGCGTAGCTGTGGCCTTCTAGGGAAGATCTaGCCTGGAGTGTGGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NLICFILFGPSVSLRSCGLLGKI*PGVWLP Trigger: AGGCAGCCACACTCCAGGCCAGATCTTCCCTAGAAG...GCCACAGCTACGCAGTGAGACACTGGGTCCAAACAAAATAAAGCAAATTAAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064129.14 |
||
| CDS-3UTR TCA 90 bp | CTTTGCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGGTGGACCATAGTCCTTGTTTCCTaGAAACCCAACAAACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LCFCTDILVQSYWSTRWTIVLVS*KPNKLQ Trigger: CTGGAGTTTGTTGGGTTTTCAGGAAACAAGGACTAT...GGTCCACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR TCA 90 bp | GTAAAAATGCTGTCTTTGCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCTGCCTCCTCGATGTTaGCATTCCCAGTACCGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VKMLSLLLHRYSCAILLELPPRC*HSQYRA Trigger: TGCTCGGTACTGGGAATGTCAACATCGAGGAGGCAG...CTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAGACAGCATTTTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR TCA 90 bp | ATGCTGTCTTTGCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGCAGACTCTAAGAGTTTaGTGGCCTCCTCATTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MLSLLLHRYSCAILLEHQQTLRV*WPPHFC Trigger: GCAGAAATGAGGAGGCCATCAAACTCTTAGAGTCTG...CTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAGACAGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| 3UTR CAA 72 bp | GGTAAAAATGCTGTCTTTGCTTCTGCACAGATATTCTaGTGCAATCCTACTGGAGCACCAGGTGGACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GKNAVFASAQIF*CNPTGAPGGPQ Trigger: TTGGGGTCCACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAGACAGCATTTTTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR TCA 90 bp | AAAACAAGTACCCGTATGTGTGAAGGCTTTGGCCACACTGGTAAAAATGCTGTCGTAGCTGAGTGCTTCTaGGAACTGGTTGGTAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KTSTRMCEGFGHTGKNAVVAECF*ELVGKE Trigger: TTCCTTACCAACCAGTTCTCAGAAGCACTCAGCTAC...GACAGCATTTTTACCAGTGTGGCCAAAGCCTTCACACATACGGGTACTTGTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064129.14 |
||
| CDS-3UTR TCA 90 bp | GTAAAAATGCTGTCTTTGCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGATTTCCCAGCAATCTTaGGCTTCAAGCCTGGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: VKMLSLLLHRYSCAILLEISQQS*ASSLAR Trigger: CCGTGCCAGGCTTGAAGCTCAAGATTGCTGGGAAAT...CTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAGACAGCATTTTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR GCA 90 bp | TGTCTTTGCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGGTGGTGCATAACAGACCTCTaGATGGATTTCCTCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CLCFCTDILVQSYWSTRWCITDL*MDFLFC Trigger: ACAGAAGAGGAAATCCATGCAGAGGTCTGTTATGCA...CCACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CCA 90 bp | GTAAAAATGCTGTCTTTGCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGGCATCTCCAGGATGGTaGCATACGTCAGGGAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VKMLSLLLHRYSCAILLEASPGW*HTSGSD Trigger: ATCACTCCCTGACGTATGCCACCATCCTGGAGATGC...CTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAGACAGCATTTTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| 3UTR CAA 72 bp | CAGAGGCAAGTGGATTGCTGTGAGTTCAAGGCTGGTTaGGTCTATGTAGGGAACTGGCTTAATGCAAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: QRQVDCCEFKAG*VYVGNWLNAKQ Trigger: TTGTTTTGCATTAAGCCAGTTCCCTACATAGACCAAACCAGCCTTGAACTCACAGCAATCCACTTGCCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
||
| CDS-3UTR GCA 90 bp | AACTTAATTTGCTTTATTTTGTTTGGACCCAGTGTCTCACTGCGTAGCTGTGGCTCAGGGAGTGATACATaGTCTCCTTGGTTCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NLICFILFGPSVSLRSCGSGSDT*SPWFWV Trigger: AACCCAGAACCAAGGAGAGCATGTATCACTCCCTGA...GCCACAGCTACGCAGTGAGACACTGGGTCCAAACAAAATAAAGCAAATTAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064129.14 |
||
| CDS-3UTR GCA 90 bp | GTAAAAATGCTGTCTTTGCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGTCCTCATTTCTGCCTTaGTCCATAAATAGCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VKMLSLLLHRYSCAILLESSFLP*SINSRA Trigger: GGCCCTGCTATTTATGGAGCAAGGCAGAAATGAGGA...CTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAGACAGCATTTTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS CCA 90 bp | TCTGAGAACTGGTTGGTAAGGAAGAGGTCCAGGGCTGTCATGCACTaGTCCAGGGCCTCATGGAGGCTGCTCACAGGAGACCCCGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SENWLVRKRSRAVMH*SRASWRLLTGDPAG Trigger: GCCGGCGGGGTCTCCTGTGAGCAGCCTCCATGAGGCCCTGGACCAGTGCATGACAGCCCTGGACCTCTTCCTTACCAACCAGTTCTCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106619.8 |
||
| CDS GCA 90 bp | GGTGAGGAAGGTGTGATAACACAGCAACAGCATGACGCACAGCACTaGACGGAAGCTGTGTCCGGTTGCGCCCTCCTCCAGCTGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GEEGVITQQQHDAQH*TEAVSGCALLQLQQ Trigger: CTGCTGCAGCTGGAGGAGGGCGCAACCGGACACAGCTTCCGTGCAGTGCTGTGCGTCATGCTGTTGCTGTGTTATCACACCTTCCTCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS CCA 90 bp | GGATGTCCTGGGGGTCGAAGGTCATCATGGCCTGCATCTCCAGGATaGTGGCATACGTCAGGGAGTGATACATGCTCTCCTTGGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GCPGGRRSSWPASPG*WHTSGSDTCSPWFW Trigger: CCAGAACCAAGGAGAGCATGTATCACTCCCTGACGTATGCCACCATCCTGGAGATGCAGGCCATGATGACCTTCGACCCCCAGGACATCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 ENSMUST00000106619.8 ENSMUST00000124209.8 ENSMUST00000153315.8 |
||
| CDS GCA 90 bp | TCCTTCGATGCCTCTGACACAGCGACTGCGCTTCTTTCATCATGTTaGCAGCAAGCAGGATGTCCTGGGGGTCGAAGGTCATCATGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SFDASDTATALLSSC*QQAGCPGGRRSSWP Trigger: AGGCCATGATGACCTTCGACCCCCAGGACATCCTGCTTGCTGGCAACATGATGAAAGAAGCGCAGTCGCTGTGTCAGAGGCATCGAAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 ENSMUST00000106619.8 ENSMUST00000124209.8 ENSMUST00000139237.3 ENSMUST00000153315.8 |
||
| CDS GCA 90 bp | CAGCCTTCATGTAGATGTAGGTGGCCTTGGACCAGGAGTTCTCCTTaGTCAGCAGGTCGGCGTAGAAGTAGGCCATTTTCCACTGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: QPSCRCRWPWTRSSP*SAGRRRSRPFSTGP Trigger: AGGGCCAGTGGAAAATGGCCTACTTCTACGCCGACCTGCTGAGCAAGGAGAACTCCTGGTCCAAGGCCACCTACATCTACATGAAGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS CCA 90 bp | TGTCCTGGGGGTCGAAGGTCATCATGGCCTGCATCTCCAGGATGGTaGCATACGTCAGGGAGTGATACATGCTCTCCTTGGTTCTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: CPGGRRSSWPASPGW*HTSGSDTCSPWFWV Trigger: AACCCAGAACCAAGGAGAGCATGTATCACTCCCTGACGTATGCCACCATCCTGGAGATGCAGGCCATGATGACCTTCGACCCCCAGGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 ENSMUST00000106619.8 ENSMUST00000124209.8 ENSMUST00000153315.8 |
||
| CDS CCA 90 bp | TCATGTTGCCAGCAAGCAGGATGTCCTGGGGGTCGAAGGTCATCATaGCCTGCATCTCCAGGATGGTGGCATACGTCAGGGAGTGATACA | + |
|
Preference number: 5 (lower is better) Translates to: SCCQQAGCPGGRRSS*PASPGWWHTSGSDT Trigger: TGTATCACTCCCTGACGTATGCCACCATCCTGGAGATGCAGGCCATGATGACCTTCGACCCCCAGGACATCCTGCTTGCTGGCAACATGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 ENSMUST00000106619.8 ENSMUST00000124209.8 ENSMUST00000139237.3 ENSMUST00000153315.8 |
||
| CDS CCA 90 bp | TCTGAGAACTGGTTGGTAAGGAAGAGGTCCAGGGCTGTCATGCACTaGTCCAGGGCCTCATGGAGGCTGCTCACAGGAGACCCTTTACAA | + |
|
Preference number: 5 (lower is better) Translates to: SENWLVRKRSRAVMH*SRASWRLLTGDPLQ Trigger: TTGTAAAGGGTCTCCTGTGAGCAGCCTCCATGAGGCCCTGGACCAGTGCATGACAGCCCTGGACCTCTTCCTTACCAACCAGTTCTCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106618.8 |
||
| CDS-3UTR CAA 90 bp | CCAAGGAAGGGCAGGGCAGGGGAGGTGATCTTTAGAAATGTTTCCAGGTGCTCTATGGACAGCGTCAGGTaGAAGGCTCCTACGCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PRKGRAGEVIFRNVSRCSMDSVR*KAPTPS Trigger: GCTTGGCGTAGGAGCCTTCAACCTGACGCTGTCCAT...AGAGCACCTGGAAACATTTCTAAAGATCACCTCCCCTGCCCTGCCCTTCCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CAA 90 bp | TTCCAGGTGCTCTGTCCAGCTAGCTGTCTGTTCATCGTGCAGCCCAAGAGTGCTTCTGCCTCCTCGATGTaGACATTCCCAGTACCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FQVLCPASCLFIVQPKSASASSM*TFPVPS Trigger: GCTCGGTACTGGGAATGTCAACATCGAGGAGGCAGA...AGCACTCTTGGGCTGCACGATGAACAGACAGCTAGCTGGACAGAGCACCTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGGTGCTCTGTCCAGCTAGCTGTCTGTTCATCGTGCAGCCCAAGAGTGCTGGATTTCCCAGCAATCTaGAGCTTCAAGCCTGGCACG | + |
|
Preference number: 5 (lower is better) Translates to: SRCSVQLAVCSSCSPRVLDFPAI*SFKPGT Trigger: CGTGCCAGGCTTGAAGCTCAAGATTGCTGGGAAATC...CAGCACTCTTGGGCTGCACGATGAACAGACAGCTAGCTGGACAGAGCACCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS CCA 90 bp | TTGAAGGCTCCTACGCCAAGCTTCACCCCTCCTTCAAAGTGTCTGTaGCTCTCTCCCTTAGAGTATTGCGAGGACTGGACGAGGCTATCC | + |
|
Preference number: 5 (lower is better) Translates to: LKAPTPSFTPPSKCL*LSPLEYCEDWTRLS Trigger: GGATAGCCTCGTCCAGTCCTCGCAATACTCTAAGGGAGAGAGCCACAGACACTTTGAAGGAGGGGTGAAGCTTGGCGTAGGAGCCTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CAA 90 bp | TGCTCTGTCCAGCTAGCTGTCTGTTCATCGTGCAGCCCAAGAGTGCTGCAGAAATCTGCCTCCTCGATGTaGACATTCCCAGTACCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CSVQLAVCSSCSPRVLQKSASSM*TFPVPS Trigger: GCTCGGTACTGGGAATGTCAACATCGAGGAGGCAGA...TTTCTGCAGCACTCTTGGGCTGCACGATGAACAGACAGCTAGCTGGACAGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CAA 90 bp | TTCCAGGTGCTCTGTCCAGCTAGCTGTCTGTTCATCGTGCAGCCCAAGAGTGCTAGCATCTCTTCAGCCTaGGTGATGACCTCCAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: FQVLCPASCLFIVQPKSASISSA*VMTSSI Trigger: GATGCTGGAGGTCATCACCAAGGCTGAAGAGATGCT...AGCACTCTTGGGCTGCACGATGAACAGACAGCTAGCTGGACAGAGCACCTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CAA 90 bp | TGCTCTGTCCAGCTAGCTGTCTGTTCATCGTGCAGCCCAAGAGTGCTGCAGAAACATTCTCTGGGCCCATaGCCAGCATCTCTTCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: CSVQLAVCSSCSPRVLQKHSLGP*PASLQP Trigger: AGGCTGAAGAGATGCTGGCAATGGGCCCAGAGAATG...TTTCTGCAGCACTCTTGGGCTGCACGATGAACAGACAGCTAGCTGGACAGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CAA 90 bp | ACCCCAAGGAAGGGCAGGGCAGGGGAGGTGATCTTTAGAAATGTTTCCAGGTGCGCTTCTTTCATCATGTaGCCAGCAAGCAGGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TPRKGRAGEVIFRNVSRCASFIM*PASRMS Trigger: GGACATCCTGCTTGCTGGCAACATGATGAAAGAAGC...GCACCTGGAAACATTTCTAAAGATCACCTCCCCTGCCCTGCCCTTCCTTGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CAA 90 bp | TCTTGTGCAATCCTACTGGAGCACCAGGTGGACCCCAAGGAAGGGCAGGGCAGGTTCGAAAATGTGTCCTaGACTCCATGGAGTAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SCAILLEHQVDPKEGQGRFENVS*TPWSSS Trigger: AGAACTACTCCATGGAGTCAAGGACACATTTTCGAA...CCTGCCCTGCCCTTCCTTGGGGTCCACCTGGTGCTCCAGTAGGATTGCACAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS TCA 90 bp | CTTCATTGTCCCCGAATGGCTTGTAGTCTTCCTTCCCAAACATGCTaGGGTAGGCAGCCTTCATGTAGATGTAGGTGGCCTTGGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LHCPRMACSLPSQTC*GRQPSCRCRWPWTR Trigger: CCTGGTCCAAGGCCACCTACATCTACATGAAGGCTGCCTACCTCAGCATGTTTGGGAAGGAAGACTACAAGCCATTCGGGGACAATGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CAA 90 bp | CTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGGTGGACCCCAAGGCTTCTGAGAACTGGTaGGTAAGGAAGAGGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLHRYSCAILLEHQVDPKASENW*VRKRSR Trigger: CCTGGACCTCTTCCTTACCAACCAGTTCTCAGAAGC...CTTGGGGTCCACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CAA 90 bp | AGACTGTGTGCTTGTGTAATCCCCACTGTGGTAGGGAGACCTGTCTCTGACTTGGCTTCTGAGAACTGGTaGGTAAGGAAGAGGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RLCACVIPTVVGRPVSDLASENW*VRKRSR Trigger: CCTGGACCTCTTCCTTACCAACCAGTTCTCAGAAGC...CAAGTCAGAGACAGGTCTCCCTACCACAGTGGGGATTACACAAGCACACAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGGGCAGGGGAGGTGATCTTTAGAAATGTTTCCAGGTGCTCTGTCCAGCTAACTTTGATGCCGCCCTaGATGAAGCTCACCATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GRAGEVIFRNVSRCSVQLTLMPP*MKLTMF Trigger: GAACATGGTGAGCTTCATCAAGGGCGGCATCAAAGT...TAGCTGGACAGAGCACCTGGAAACATTTCTAAAGATCACCTCCCCTGCCCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CAA 90 bp | AGACTGTGTGCTTGTGTAATCCCCACTGTGGTAGGGAGACCTGTCTCTGACTTGAGGTCATGCTTGGACTaGGGGACTGATCCAGAATGC | + |
|
Preference number: 5 (lower is better) Translates to: RLCACVIPTVVGRPVSDLRSCLD*GTDPEC Trigger: GCATTCTGGATCAGTCCCCAAGTCCAAGCATGACCT...CAAGTCAGAGACAGGTCTCCCTACCACAGTGGGGATTACACAAGCACACAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
||
| CDS TCA 90 bp | ATACATGCTCTCCTTGGTTCTGGGTTTGAGGTAGCTGAGTGCTTCTaGGAACTGGTTGGTAAGGAAGAGGTCCAGGGCTGTCATGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: IHALLGSGFEVAECF*ELVGKEEVQGCHAL Trigger: CAGTGCATGACAGCCCTGGACCTCTTCCTTACCAACCAGTTCTCAGAAGCACTCAGCTACCTCAAACCCAGAACCAAGGAGAGCATGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 ENSMUST00000106619.8 |
||
| CDS TCA 90 bp | TTCTGTGAACTGGTCAATGGTAGGACGGTGCACCAGGTTGCTGAATaGGTCCGTCATAGAAGACTTCCTTCGATGCCTCTGACACAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: FCELVNGRTVHQVAE*VRHRRLPSMPLTQR Trigger: TCGCTGTGTCAGAGGCATCGAAGGAAGTCTTCTATGACGGACTCATTCAGCAACCTGGTGCACCGTCCTACCATTGACCAGTTCACAGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 ENSMUST00000106619.8 ENSMUST00000124209.8 ENSMUST00000139237.3 ENSMUST00000153315.8 |
||
| CDS CCA 90 bp | GACGAGACTAGAGATCTGTTGCCATCTTCTAGGGAAGATCTGGCCTaGAGTGTGGCTGCCTGGATTCGAAAATGTGTCCTTGACTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: DETRDLLPSSREDLA*SVAAWIRKCVLDSM Trigger: CATGGAGTCAAGGACACATTTTCGAATCCAGGCAGCCACACTCCAGGCCAGATCTTCCCTAGAAGATGGCAACAGATCTCTAGTCTCGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CAA 90 bp | CTTTGCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGGTGGACCGATTTCCCAGCAATCTaGAGCTTCAAGCCTGGCACG | + |
|
Preference number: 5 (lower is better) Translates to: LCFCTDILVQSYWSTRWTDFPAI*SFKPGT Trigger: CGTGCCAGGCTTGAAGCTCAAGATTGCTGGGAAATC...GGTCCACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CAA 90 bp | TGTCTTTGCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGGTGGCATTCTCTGGGCCCATaGCCAGCATCTCTTCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: CLCFCTDILVQSYWSTRWHSLGP*PASLQP Trigger: AGGCTGAAGAGATGCTGGCAATGGGCCCAGAGAATG...CCACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS CCA 90 bp | CTAGAGATCTGTTGCCATCTTCTAGGGAAGATCTGGCCTGGAGTGTaGCTGCCTGGATTCGAAAATGTGTCCTTGACTCCATGGAGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: LEICCHLLGKIWPGV*LPGFENVSLTPWSS Trigger: ACTACTCCATGGAGTCAAGGACACATTTTCGAATCCAGGCAGCCACACTCCAGGCCAGATCTTCCCTAGAAGATGGCAACAGATCTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS CCA 90 bp | ACACTGACGAGACTAGAGATCTGTTGCCATCTTCTAGGGAAGATCTaGCCTGGAGTGTGGCTGCCTGGATTCGAAAATGTGTCCTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: TLTRLEICCHLLGKI*PGVWLPGFENVSLT Trigger: AGTCAAGGACACATTTTCGAATCCAGGCAGCCACACTCCAGGCCAGATCTTCCCTAGAAGATGGCAACAGATCTCTAGTCTCGTCAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS GCA 90 bp | TCTGCATGGATTTCCTCTTCTGTGAACTGGTCAATGGTAGGACGGTaGACCAGGTTGCTGAATGAGTCCGTCATAGAAGACTTCCTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: SAWISSSVNWSMVGR*TRLLNESVIEDFLR Trigger: TCGAAGGAAGTCTTCTATGACGGACTCATTCAGCAACCTGGTGCACCGTCCTACCATTGACCAGTTCACAGAAGAGGAAATCCATGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 ENSMUST00000106619.8 ENSMUST00000124209.8 ENSMUST00000139237.3 ENSMUST00000153315.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTAAAACAAGTACCCGTATGTGTGAAGGCTTTGGCCACACTGGTAAAAATGATGGACAGCGTCAGGTaGAAGGCTCCTACGCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SVKQVPVCVKALATLVKMMDSVR*KAPTPS Trigger: GCTTGGCGTAGGAGCCTTCAACCTGACGCTGTCCAT...CATTTTTACCAGTGTGGCCAAAGCCTTCACACATACGGGTACTTGTTTTACACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064129.14 |
||
| CDS-3UTR CAA 90 bp | TGCTCTGTCCAGCTAGCTGTCTGTTCATCGTGCAGCCCAAGAGTGCTGCAGAAAGCATCAATATTTCCTTaGATAGCTTCAATCCGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: CSVQLAVCSSCSPRVLQKASIFP*IASIRP Trigger: TGGGCGGATTGAAGCTATCAAAGGAAATATTGATGC...TTTCTGCAGCACTCTTGGGCTGCACGATGAACAGACAGCTAGCTGGACAGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CAA 90 bp | ATGCTGTCTTTGCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGAGCATCTCTTCAGCCTaGGTGATGACCTCCAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: MLSLLLHRYSCAILLEHQSISSA*VMTSSI Trigger: GATGCTGGAGGTCATCACCAAGGCTGAAGAGATGCT...CTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAGACAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CAA 90 bp | ATGCTGTCTTTGCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGACTTTGATGCCGCCCTaGATGAAGCTCACCATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: MLSLLLHRYSCAILLEHQTLMPP*MKLTMF Trigger: GAACATGGTGAGCTTCATCAAGGGCGGCATCAAAGT...CTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAGACAGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CAA 90 bp | AATGTTTCCAGGTGCTCTGTCCAGCTAGCTGTCTGTTCATCGTGCAGCCCAAGAGCATCAATATTTCCTTaGATAGCTTCAATCCGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: NVSRCSVQLAVCSSCSPRASIFP*IASIRP Trigger: TGGGCGGATTGAAGCTATCAAAGGAAATATTGATGC...TCTTGGGCTGCACGATGAACAGACAGCTAGCTGGACAGAGCACCTGGAAACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CAA 90 bp | CTTTGCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGGTGGACCGTTCCAGTAGGGCATTaGGAATCAAGTAATGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LCFCTDILVQSYWSTRWTVPVGH*ESSNGH Trigger: ATGACCATTACTTGATTCCAAATGCCCTACTGGAAC...GGTCCACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS GCA 90 bp | TTTAATCTTCTTTTCATTGGCAGAAATGCTCCTGAAATTCTCCTCTaGCTCCTGGATTCGGCCCAGGTATTTCAGACACAGGCCTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: FNLLFIGRNAPEILL*LLDSAQVFQTQAFQ Trigger: CTGAAAGGCCTGTGTCTGAAATACCTGGGCCGAATCCAGGAGGCAGAGGAGAATTTCAGGAGCATTTCTGCCAATGAAAAGAAGATTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CAA 90 bp | GTAAAAATGCTGTCTTTGCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGGCTTCTGAGAACTGGTaGGTAAGGAAGAGGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VKMLSLLLHRYSCAILLEASENW*VRKRSR Trigger: CCTGGACCTCTTCCTTACCAACCAGTTCTCAGAAGC...CTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAGACAGCATTTTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
||
| CDS-3UTR CAA 90 bp | AACTTAATTTGCTTTATTTTGTTTGGACCCAGTGTCTCACTGCGTAGCTGTGGCGCTTCTTTCATCATGTaGCCAGCAAGCAGGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NLICFILFGPSVSLRSCGASFIM*PASRMS Trigger: GGACATCCTGCTTGCTGGCAACATGATGAAAGAAGC...GCCACAGCTACGCAGTGAGACACTGGGTCCAAACAAAATAAAGCAAATTAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064129.14 |
||
| CDS-3UTR CAA 90 bp | GTCTTTGCTTCTGCACAGATATTCTTGTGCAATCCTACTGGAGCACCAGGTGGAGTTCCAGTAGGGCATTaGGAATCAAGTAATGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: VFASAQIFLCNPTGAPGGVPVGH*ESSNGH Trigger: ATGACCATTACTTGATTCCAAATGCCCTACTGGAAC...TCCACCTGGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
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| CDS-3UTR CAA 90 bp | AGTGTAAAACAAGTACCCGTATGTGTGAAGGCTTTGGCCACACTGGTAAAAATGTTCGAAAATGTGTCCTaGACTCCATGGAGTAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: SVKQVPVCVKALATLVKMFENVS*TPWSSS Trigger: AGAACTACTCCATGGAGTCAAGGACACATTTTCGAA...CATTTTTACCAGTGTGGCCAAAGCCTTCACACATACGGGTACTTGTTTTACACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064129.14 |
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| CDS GCA 72 bp | GGTGTGATAACACAGCAACAGCATGACGCACAGCACTaGACGGAAGCTGTGTCCGGTTGCGCCCTCCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: GVITQQQHDAQH*TEAVSGCALLQ Trigger: CTGGAGGAGGGCGCAACCGGACACAGCTTCCGTGCAGTGCTGTGCGTCATGCTGTTGCTGTGTTATCACACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
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| CDS CCA 72 bp | TGGTTGGTAAGGAAGAGGTCCAGGGCTGTCATGCACTaGTCCAGGGCCTCATGGAGGCTGCTCACAGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: WLVRKRSRAVMH*SRASWRLLTGD Trigger: GTCTCCTGTGAGCAGCCTCCATGAGGCCCTGGACCAGTGCATGACAGCCCTGGACCTCTTCCTTACCAACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 ENSMUST00000106619.8 |
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| CDS CAA 90 bp | AACCTCGGGCTTTGTCACTTCTCAGAGGACAGGTCATGCTTGGACTaGGGGACTGATCCAGAATGCTCTCTGCCCAGGTGTGGGGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: NLGLCHFSEDRSCLD*GTDPECSLPRCGVG Trigger: GCCCACCCCACACCTGGGCAGAGAGCATTCTGGATCAGTCCCCAAGTCCAAGCATGACCTGTCCTCTGAGAAGTGACAAAGCCCGAGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| CDS TCA 72 bp | CTTCTCAGAGGACAGGTCATGCTTGGACTTGGGGACTaGTCCAGAATGCTCTCTGCCCAGGTGTGGGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: LLRGQVMLGLGD*SRMLSAQVWGG Trigger: CCCACCCCACACCTGGGCAGAGAGCATTCTGGATCAGTCCCCAAGTCCAAGCATGACCTGTCCTCTGAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| CDS CAA 90 bp | GCTGAGTACTCATTCTCTGGGCCCATTGCCAGCATCTCTTCAGCCTaGGTGATGACCTCCAGCATCCCATCCGTGAGTGTCGGCTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: AEYSFSGPIASISSA*VMTSSIPSVSVGCF Trigger: GAAGCAGCCGACACTCACGGATGGGATGCTGGAGGTCATCACCAAGGCTGAAGAGATGCTGGCAATGGGCCCAGAGAATGAGTACTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
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| CDS GCA 72 bp | GCCTCTGACACAGCGACTGCGCTTCTTTCATCATGTTaGCAGCAAGCAGGATGTCCTGGGGGTCGAAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: ASDTATALLSSC*QQAGCPGGRRS Trigger: TGACCTTCGACCCCCAGGACATCCTGCTTGCTGGCAACATGATGAAAGAAGCGCAGTCGCTGTGTCAGAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 ENSMUST00000106619.8 ENSMUST00000124209.8 ENSMUST00000139237.3 ENSMUST00000153315.8 |
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| CDS CCA 72 bp | GGGGGTCGAAGGTCATCATGGCCTGCATCTCCAGGATaGTGGCATACGTCAGGGAGTGATACATGCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: GGRRSSWPASPG*WHTSGSDTCSP Trigger: AGGAGAGCATGTATCACTCCCTGACGTATGCCACCATCCTGGAGATGCAGGCCATGATGACCTTCGACCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 ENSMUST00000106619.8 ENSMUST00000124209.8 ENSMUST00000153315.8 |
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| CDS CCA 72 bp | CCTACGCCAAGCTTCACCCCTCCTTCAAAGTGTCTGTaGCTCTCTCCCTTAGAGTATTGCGAGGACTGGACG | + |
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Preference number: 6 (lower is better) Translates to: PTPSFTPPSKCL*LSPLEYCEDWT Trigger: CGTCCAGTCCTCGCAATACTCTAAGGGAGAGAGCCACAGACACTTTGAAGGAGGGGTGAAGCTTGGCGTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
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| CDS CAA 90 bp | AATCTGAACCTCGGGCTTTGTCACTTCTCAGAGGACAGGTCATGCTaGGACTTGGGGACTGATCCAGAATGCTCTCTGCCCAGGTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: NLNLGLCHFSEDRSC*DLGTDPECSLPRCG Trigger: CCCACACCTGGGCAGAGAGCATTCTGGATCAGTCCCCAAGTCCAAGCATGACCTGTCCTCTGAGAAGTGACAAAGCCCGAGGTTCAGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| CDS GCA 72 bp | TGTAGATGTAGGTGGCCTTGGACCAGGAGTTCTCCTTaGTCAGCAGGTCGGCGTAGAAGTAGGCCATTTTCC | + |
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Preference number: 6 (lower is better) Translates to: CRCRWPWTRSSP*SAGRRRSRPFS Trigger: GGAAAATGGCCTACTTCTACGCCGACCTGCTGAGCAAGGAGAACTCCTGGTCCAAGGCCACCTACATCTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
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| CDS CAA 90 bp | TCGCAGCACTCCTCAAACCGCCGGACAGCAGCATCAATATTTCCTTaGATAGCTTCAATCCGCCCAGCAAAGAACAGGAAGATGGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: SQHSSNRRTAASIFP*IASIRPAKNRKMAP Trigger: GGGCGCCATCTTCCTGTTCTTTGCTGGGCGGATTGAAGCTATCAAAGGAAATATTGATGCTGCTGTCCGGCGGTTTGAGGAGTGCTGCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
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| CDS TCA 72 bp | CTCCTTGGTTCTGGGTTTGAGGTAGCTGAGTGCTTCTaGGAACTGGTTGGTAAGGAAGAGGTCCAGGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: LLGSGFEVAECF*ELVGKEEVQGC Trigger: ACAGCCCTGGACCTCTTCCTTACCAACCAGTTCTCAGAAGCACTCAGCTACCTCAAACCCAGAACCAAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 ENSMUST00000106619.8 ENSMUST00000124209.8 ENSMUST00000153315.8 |
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| CDS TCA 72 bp | CTGGTCAATGGTAGGACGGTGCACCAGGTTGCTGAATaGGTCCGTCATAGAAGACTTCCTTCGATGCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: LVNGRTVHQVAE*VRHRRLPSMPL Trigger: CAGAGGCATCGAAGGAAGTCTTCTATGACGGACTCATTCAGCAACCTGGTGCACCGTCCTACCATTGACCAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 ENSMUST00000106619.8 ENSMUST00000124209.8 ENSMUST00000139237.3 ENSMUST00000153315.8 |
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| CDS TCA 72 bp | TTACCCAGCTTGGCCAGGCTTCAGAGTTTGGGAATCTaGACCTCGGGCTTTGTCACTTCTCAGAGGACAGGT | + |
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Preference number: 6 (lower is better) Translates to: LPSLARLQSLGI*TSGFVTSQRTG Trigger: ACCTGTCCTCTGAGAAGTGACAAAGCCCGAGGTTCAGATTCCCAAACTCTGAAGCCTGGCCAAGCTGGGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| CDS CAA 90 bp | CTTCACCCCTCCTTCAAAGTGTCTGTGGCTCTCTCCCTTAGAGTATaGCGAGGACTGGACGAGGCTATCCAGTTCCTTGTAAGTCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: LHPSFKVSVALSLRV*RGLDEAIQFLVSLV Trigger: TACCAGACTTACAAGGAACTGGATAGCCTCGTCCAGTCCTCGCAATACTCTAAGGGAGAGAGCCACAGACACTTTGAAGGAGGGGTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
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| CDS CCA 72 bp | TGTTGCCATCTTCTAGGGAAGATCTGGCCTGGAGTGTaGCTGCCTGGATTCGAAAATGTGTCCTTGACTCCA | + |
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Preference number: 6 (lower is better) Translates to: CCHLLGKIWPGV*LPGFENVSLTP Trigger: TGGAGTCAAGGACACATTTTCGAATCCAGGCAGCCACACTCCAGGCCAGATCTTCCCTAGAAGATGGCAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
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| CDS CAA 72 bp | CCAGGCTTCAGAGTTTGGGAATCTGAACCTCGGGCTTaGTCACTTCTCAGAGGACAGGTCATGCTTGGACTT | + |
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Preference number: 6 (lower is better) Translates to: PGFRVWESEPRA*SLLRGQVMLGL Trigger: AAGTCCAAGCATGACCTGTCCTCTGAGAAGTGACAAAGCCCGAGGTTCAGATTCCCAAACTCTGAAGCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106619.8 |
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| CDS CCA 72 bp | AGAGATCTGTTGCCATCTTCTAGGGAAGATCTGGCCTaGAGTGTGGCTGCCTGGATTCGAAAATGTGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: RDLLPSSREDLA*SVAAWIRKCVL Trigger: AAGGACACATTTTCGAATCCAGGCAGCCACACTCCAGGCCAGATCTTCCCTAGAAGATGGCAACAGATCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
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| CDS CCA 72 bp | AGACTAGAGATCTGTTGCCATCTTCTAGGGAAGATCTaGCCTGGAGTGTGGCTGCCTGGATTCGAAAATGTG | + |
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Preference number: 6 (lower is better) Translates to: RLEICCHLLGKI*PGVWLPGFENV Trigger: CACATTTTCGAATCCAGGCAGCCACACTCCAGGCCAGATCTTCCCTAGAAGATGGCAACAGATCTCTAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
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| CDS CAA 72 bp | TCTGTGAACTGGTCAATGGTAGGACGGTGCACCAGGTaGCTGAATGAGTCCGTCATAGAAGACTTCCTTCGA | + |
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Preference number: 6 (lower is better) Translates to: SVNWSMVGRCTR*LNESVIEDFLR Trigger: TCGAAGGAAGTCTTCTATGACGGACTCATTCAGCAACCTGGTGCACCGTCCTACCATTGACCAGTTCACAGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 ENSMUST00000106619.8 ENSMUST00000124209.8 ENSMUST00000139237.3 ENSMUST00000153315.8 |
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| CDS CAA 72 bp | TCCTTCAAAGTGTCTGTGGCTCTCTCCCTTAGAGTATaGCGAGGACTGGACGAGGCTATCCAGTTCCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: SFKVSVALSLRV*RGLDEAIQFLV Trigger: TACAAGGAACTGGATAGCCTCGTCCAGTCCTCGCAATACTCTAAGGGAGAGAGCCACAGACACTTTGAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 ENSMUST00000153315.8 |
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| CDS TCA 72 bp | AATGAGTCCGTCATAGAAGACTTCCTTCGATGCCTCTaGCACAGCGACTGCGCTTCTTTCATCATGTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: NESVIEDFLRCL*HSDCASFIMLP Trigger: TGGCAACATGATGAAAGAAGCGCAGTCGCTGTGTCAGAGGCATCGAAGGAAGTCTTCTATGACGGACTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 ENSMUST00000106619.8 ENSMUST00000124209.8 ENSMUST00000139237.3 ENSMUST00000153315.8 |
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| CDS CAA 72 bp | TCCTCAAACCGCCGGACAGCAGCATCAATATTTCCTTaGATAGCTTCAATCCGCCCAGCAAAGAACAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SSNRRTAASIFP*IASIRPAKNRK Trigger: CTTCCTGTTCTTTGCTGGGCGGATTGAAGCTATCAAAGGAAATATTGATGCTGCTGTCCGGCGGTTTGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
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| CDS CAA 90 bp | AAGATCTGGCCTGGAGTGTGGCTGCCTGGATTCGAAAATGTGTCCTaGACTCCATGGAGTAGTTCTTGTAGTTTTGCTTTGCAGACTCTA | + |
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Preference number: 6 (lower is better) Translates to: KIWPGVWLPGFENVS*TPWSSSCSFALQTL Trigger: TAGAGTCTGCAAAGCAAAACTACAAGAACTACTCCATGGAGTCAAGGACACATTTTCGAATCCAGGCAGCCACACTCCAGGCCAGATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
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| CDS TCA 72 bp | CTGGAGTGTGGCTGCCTGGATTCGAAAATGTGTCCTTaGCTCCATGGAGTAGTTCTTGTAGTTTTGCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: LECGCLDSKMCP*LHGVVLVVLLC Trigger: GCAAAGCAAAACTACAAGAACTACTCCATGGAGTCAAGGACACATTTTCGAATCCAGGCAGCCACACTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
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| CDS CAA 72 bp | CCTGGAGTGTGGCTGCCTGGATTCGAAAATGTGTCCTaGACTCCATGGAGTAGTTCTTGTAGTTTTGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: PGVWLPGFENVS*TPWSSSCSFAL Trigger: CAAAGCAAAACTACAAGAACTACTCCATGGAGTCAAGGACACATTTTCGAATCCAGGCAGCCACACTCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064129.14 ENSMUST00000106618.8 |
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