Pregenerated sensors for TTC38 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035944Ensembl transcript IDs: ENSMUST00000124011.2, ENSMUST00000146088.8
Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGCTGCAAGAAGATGGTCTCCTTTTGGATGCCTGTAGCTCAAGATaGAGAACTCTCAGCTCCTCCTGCACCATGCCTGCCTGGATGCCG | + |
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Preference number: 1 (lower is better) Translates to: WLQEDGLLLDACSSR*RTLSSSCTMPAWMP Trigger: CGGCATCCAGGCAGGCATGGTGCAGGAGGAGCTGAGAGTTCTGCATCTTGAGCTACAGGCATCCAAAAGGAGACCATCTTCTTGCAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR GCA 90 bp | ACTCCCCACTCCCACCTGCCCATCAGTCCCTACTTAAGTAGGAACTaGATCAACTTCCAGGAGGGATGTCCCTGTCACAGAAGCAGGAGA | + |
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Preference number: 1 (lower is better) Translates to: TPHSHLPISPYLSRN*INFQEGCPCHRSRR Trigger: TCTCCTGCTTCTGTGACAGGGACATCCCTCCTGGAAGTTGATGCAGTTCCTACTTAAGTAGGGACTGATGGGCAGGTGGGAGTGGGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR CCA 90 bp | TGCAGAAGGGACCCTCCTGCTGGCTGCAAGAAGATGGTCTCCTTTTaGATGCCTGTAGCTCAAGATGCAGAACTCTCAGCTCCTCCTGCA | + |
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Preference number: 1 (lower is better) Translates to: CRRDPPAGCKKMVSF*MPVAQDAELSAPPA Trigger: TGCAGGAGGAGCTGAGAGTTCTGCATCTTGAGCTACAGGCATCCAAAAGGAGACCATCTTCTTGCAGCCAGCAGGAGGGTCCCTTCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR TCA 90 bp | AGAGAAGGCACTGTCACCAGCCCACAGGCAGGGTGGAAGGCTTTCTaGAAGAGACAGAGAGCAAGACTCCGCTTCTGGCTGAATCATGTA | + |
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Preference number: 1 (lower is better) Translates to: REGTVTSPQAGWKAF*KRQRARLRFWLNHV Trigger: TACATGATTCAGCCAGAAGCGGAGTCTTGCTCTCTGTCTCTTTCAGAAAGCCTTCCACCCTGCCTGTGGGCTGGTGACAGTGCCTTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR GCA 90 bp | CATAGACTTCTAGACCTCCCAGCTGACCTGGCCACATCTCTTCGCTaGCTGCCGACTTCAGAACAAGAAAATACAATGTTCAAGGCACCT | + |
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Preference number: 1 (lower is better) Translates to: HRLLDLPADLATSLR*LPTSEQENTMFKAP Trigger: AGGTGCCTTGAACATTGTATTTTCTTGTTCTGAAGTCGGCAGGCAGCGAAGAGATGTGGCCAGGTCAGCTGGGAGGTCTAGAAGTCTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR CCA 90 bp | AATGAGGAGGTTCCCCCTTGGCACCTGTCCCCAGGCTCCCTGATATaGAGACAGTACCTCTTCAAATCCTATGGCGATTACACAATTTCT | + |
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Preference number: 1 (lower is better) Translates to: NEEVPPWHLSPGSLI*RQYLFKSYGDYTIS Trigger: AGAAATTGTGTAATCGCCATAGGATTTGAAGAGGTACTGTCTCCATATCAGGGAGCCTGGGGACAGGTGCCAAGGGGGAACCTCCTCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR CCA 90 bp | TTTGGAATCATATACATAATGAGGACTAATGAGGAGGTTCCCCCTTaGCACCTGTCCCCAGGCTCCCTGATATGGAGACAGTACCTCTTC | + |
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Preference number: 1 (lower is better) Translates to: FGIIYIMRTNEEVPP*HLSPGSLIWRQYLF Trigger: GAAGAGGTACTGTCTCCATATCAGGGAGCCTGGGGACAGGTGCCAAGGGGGAACCTCCTCATTAGTCCTCATTATGTATATGATTCCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR GCA 90 bp | AATTGTTTTAATGAATGCCCAAAACCTGTCCAGTCCTCAGCAGACTaGAGGGACTCTGAGCAGGCTAAGCAAAGATCTGGTTTGGAGACC | + |
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Preference number: 1 (lower is better) Translates to: NCFNECPKPVQSSAD*RDSEQAKQRSGLET Trigger: GGTCTCCAAACCAGATCTTTGCTTAGCCTGCTCAGAGTCCCTGCAGTCTGCTGAGGACTGGACAGGTTTTGGGCATTCATTAAAACAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR CCA 90 bp | GTCCCCAGGCTCCCTGATATGGAGACAGTACCTCTTCAAATCCTATaGCGATTACACAATTTCTTGACTTGCTGCCTCATCCAGCTAAGA | + |
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Preference number: 1 (lower is better) Translates to: VPRLPDMETVPLQIL*RLHNFLTCCLIQLR Trigger: TCTTAGCTGGATGAGGCAGCAAGTCAAGAAATTGTGTAATCGCCATAGGATTTGAAGAGGTACTGTCTCCATATCAGGGAGCCTGGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR TCA 90 bp | TTTAAGATCAGTCGCCTGTCCCTGGCAGATGCATGCCTTCTTTCATaGAAGCCTACACATACCAGCTTTTACAGACAAGGCATTCAATGG | + |
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Preference number: 1 (lower is better) Translates to: FKISRLSLADACLLS*KPTHTSFYRQGIQW Trigger: CCATTGAATGCCTTGTCTGTAAAAGCTGGTATGTGTAGGCTTTCATGAAAGAAGGCATGCATCTGCCAGGGACAGGCGACTGATCTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR TCA 90 bp | CTACACATACCAGCTTTTACAGACAAGGCATTCAATGGAAGCCATTaGATACCAGAGATCACAGCACAAAGTGGTTCAATAGCAAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: LHIPAFTDKAFNGSH*IPEITAQSGSIARA Trigger: TGCCCTTGCTATTGAACCACTTTGTGCTGTGATCTCTGGTATTCAATGGCTTCCATTGAATGCCTTGTCTGTAAAAGCTGGTATGTGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR TCA 90 bp | CCCTACTTTGACCAAACTACTGATTTGGAGAATTCTGCTCAGGACTaGACTTTAACCTCTGATAAACAAACCCAGCTGTTTCCTAACCGT | + |
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Preference number: 1 (lower is better) Translates to: PYFDQTTDLENSAQD*TLTSDKQTQLFPNR Trigger: ACGGTTAGGAAACAGCTGGGTTTGTTTATCAGAGGTTAAAGTTCAGTCCTGAGCAGAATTCTCCAAATCAGTAGTTTGGTCAAAGTAGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR CCA 90 bp | CATGTTGGCCCTGAGAGGAATTCTGAACATCACTCAAAATTAACTTaGGTTCCCTACTTTGACCAAACTACTGATTTGGAGAATTCTGCT | + |
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Preference number: 1 (lower is better) Translates to: HVGPERNSEHHSKLT*VPYFDQTTDLENSA Trigger: AGCAGAATTCTCCAAATCAGTAGTTTGGTCAAAGTAGGGAACCCAAGTTAATTTTGAGTGATGTTCAGAATTCCTCTCAGGGCCAACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCCCCCTTGGCACCTGTCCCCAGGCTCCCTGATATGGAGACAGTACCTCTTCTGCACCATGCCTGCCTaGATGCCGCCACGCTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: VPPWHLSPGSLIWRQYLFCTMPA*MPPRFP Trigger: TGGGAAGCGTGGCGGCATCCAGGCAGGCATGGTGCA...GAAGAGGTACTGTCTCCATATCAGGGAGCCTGGGGACAGGTGCCAAGGGGGAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR-3UTR GCA 90 bp | ATCTCCCTAGGACGCAACCCAAACCTGGCACTTGGGAGCTGCTCAGAGGTTCCCGAAAGGAAATGCCCCTaGTCACTGGGACCCCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: ISLGRNPNLALGSCSEVPERKCP*SLGPQA Trigger: TGCCTGGGGTCCCAGTGAGCAGGGGCATTTCCTTTC...GGGAACCTCTGAGCAGCTCCCAAGTGCCAGGTTTGGGTTGCGTCCTAGGGAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCCCATCTCCCTAGGACGCAACCCAAACCTGGCACTTGGGAGCTGCTCAGAGCAGTCCTCAGCAGACTaGAGGGACTCTGAGCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: KPISLGRNPNLALGSCSEQSSAD*RDSEQA Trigger: AGCCTGCTCAGAGTCCCTGCAGTCTGCTGAGGACTG...CTCTGAGCAGCTCCCAAGTGCCAGGTTTGGGTTGCGTCCTAGGGAGATGGGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCCCATCTCCCTAGGACGCAACCCAAACCTGGCACTTGGGAGCTGCTCAGAGTCCTCCCCAGGGAAATaGGACAGCAGGACCTGTGCA | + |
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Preference number: 2 (lower is better) Translates to: KPISLGRNPNLALGSCSESSPGK*DSRTCA Trigger: TGCACAGGTCCTGCTGTCCCATTTCCCTGGGGAGGA...CTCTGAGCAGCTCCCAAGTGCCAGGTTTGGGTTGCGTCCTAGGGAGATGGGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTGGTCATCTGGAAGAACGGCAAGTGCTCAGCCATGGAGCCATCTCTCCAGACCCCCAGAAAGGAAATaGCCCTGCTCACTGGGACCC | + |
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Preference number: 2 (lower is better) Translates to: LWSSGRTASAQPWSHLSRPPERK*PCSLGP Trigger: GGGTCCCAGTGAGCAGGGGCATTTCCTTTCTGGGGG...TCTGGAGAGATGGCTCCATGGCTGAGCACTTGCCGTTCTTCCAGATGACCAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAACTGCATCAACTTCCAGGAGGGATGTCCCTGTCACAGAAGCAGGAGATGGCGTCTCTGGGGACGGTaGCAGGTGCAGTTGTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: RNCINFQEGCPCHRSRRWRLWGR*QVQLSG Trigger: CCCAGACAACTGCACCTGCCACCGTCCCCAGAGACG...CCATCTCCTGCTTCTGTGACAGGGACATCCCTCCTGGAAGTTGATGCAGTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAACGGCAAGTGCTCAGCCATGGAGCCATCTCTCCAGACGCATACACATTTCTGTGGGGGCAGACTTTaGGGGCCTAGCTCCACCCAG | + |
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Preference number: 2 (lower is better) Translates to: KNGKCSAMEPSLQTHTHFCGGRL*GPSSTQ Trigger: CTGGGTGGAGCTAGGCCCTCAAAGTCTGCCCCCACA...GAAATGTGTATGCGTCTGGAGAGATGGCTCCATGGCTGAGCACTTGCCGTTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR-3UTR GCA 90 bp | AGGAACTGCATCAACTTCCAGGAGGGATGTCCCTGTCACAGAAGCAGGAGATGGCCTAGCTCCACCCAGTaGAGAAGGGACCCTCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: RNCINFQEGCPCHRSRRWPSSTQ*RRDPPA Trigger: AGCAGGAGGGTCCCTTCTGCACTGGGTGGAGCTAGG...CCATCTCCTGCTTCTGTGACAGGGACATCCCTCCTGGAAGTTGATGCAGTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR-3UTR CCA 90 bp | CATGGAGCCATCTCTCCAGACGCATACACATTTCCCTTTAAGATCAGTCGCCTGGAGGAGGTTCCCCCTTaGCACCTGTCCCCAGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: HGAISPDAYTFPFKISRLEEVPP*HLSPGS Trigger: GGAGCCTGGGGACAGGTGCCAAGGGGGAACCTCCTC...CAGGCGACTGATCTTAAAGGGAAATGTGTATGCGTCTGGAGAGATGGCTCCATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR CAA 90 bp | GTGCAGAAGGGACCCTCCTGCTGGCTGCAAGAAGATGGTCTCCTTTaGGATGCCTGTAGCTCAAGATGCAGAACTCTCAGCTCCTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: VQKGPSCWLQEDGLL*DACSSRCRTLSSSC Trigger: GCAGGAGGAGCTGAGAGTTCTGCATCTTGAGCTACAGGCATCCAAAAGGAGACCATCTTCTTGCAGCCAGCAGGAGGGTCCCTTCTGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR CAA 90 bp | TCCCTCAAGATTTACTCCCAAGTGAAGTCTAAAGAGAAGCTCCAGTaGGCACCACCAAGTCCCCCAGGGAGGCAGAAGGCATTCTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: SLKIYSQVKSKEKLQ*APPSPPGRQKAFFP Trigger: GGGGAAGAATGCCTTCTGCCTCCCTGGGGGACTTGGTGGTGCCAACTGGAGCTTCTCTTTAGACTTCACTTGGGAGTAAATCTTGAGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR-3UTR TCA 90 bp | GTCGCCTGTCCCTGGCAGATGCATGCCTTCTTTCATGAAAGCCTACACATACCAGCAGTTGTCTGGGGCTaGCAACCAAAGCCAACGAGA | + |
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Preference number: 2 (lower is better) Translates to: VACPWQMHAFFHESLHIPAVVWG*QPKPTR Trigger: TCTCGTTGGCTTTGGTTGTCAGCCCCAGACAACTGC...TGGTATGTGTAGGCTTTCATGAAAGAAGGCATGCATCTGCCAGGGACAGGCGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR-3UTR CCA 90 bp | GTCGCCTGTCCCTGGCAGATGCATGCCTTCTTTCATGAAAGCCTACACATACCAAAGGGACCCTCCTGCTaGCTGCAAGAAGATGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: VACPWQMHAFFHESLHIPKGPSC*LQEDGL Trigger: GAGACCATCTTCTTGCAGCCAGCAGGAGGGTCCCTT...TGGTATGTGTAGGCTTTCATGAAAGAAGGCATGCATCTGCCAGGGACAGGCGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR-3UTR GCA 90 bp | GTCGCCTGTCCCTGGCAGATGCATGCCTTCTTTCATGAAAGCCTACACATACCAGACCCTCCTGCTGGCTaGAAGAAGATGGTCTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: VACPWQMHAFFHESLHIPDPPAG*KKMVSF Trigger: AAAGGAGACCATCTTCTTGCAGCCAGCAGGAGGGTC...TGGTATGTGTAGGCTTTCATGAAAGAAGGCATGCATCTGCCAGGGACAGGCGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCCCCCTTGGCACCTGTCCCCAGGCTCCCTGATATGGAGACAGTACCTCTTCACCAAACTACTGATTTaGAGAATTCTGCTCAGGACT | + |
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Preference number: 2 (lower is better) Translates to: VPPWHLSPGSLIWRQYLFTKLLI*RILLRT Trigger: AGTCCTGAGCAGAATTCTCCAAATCAGTAGTTTGGT...GAAGAGGTACTGTCTCCATATCAGGGAGCCTGGGGACAGGTGCCAAGGGGGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAACGGCAAGTGCTCAGCCATGGAGCCATCTCTCCAGACGCATACACATTTCCTGGCTGCAAGAAGATaGTCTCCTTTTGGATGCCTG | + |
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Preference number: 2 (lower is better) Translates to: KNGKCSAMEPSLQTHTHFLAARR*SPFGCL Trigger: CAGGCATCCAAAAGGAGACCATCTTCTTGCAGCCAG...GAAATGTGTATGCGTCTGGAGAGATGGCTCCATGGCTGAGCACTTGCCGTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR-3UTR TCA 90 bp | CCGACGTGTGCGTATGTACAGGTATGCAAGTGCCTACAGAGGCCAGAAGAGAGTGATTACACAATTTCTTaGCTTGCTGCCTCATCCAGC | + |
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Preference number: 2 (lower is better) Translates to: PTCAYVQVCKCLQRPEESDYTIS*LAASSS Trigger: GCTGGATGAGGCAGCAAGTCAAGAAATTGTGTAATC...ACTCTCTTCTGGCCTCTGTAGGCACTTGCATACCTGTACATACGCACACGTCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR-3UTR GCA 90 bp | CCGACGTGTGCGTATGTACAGGTATGCAAGTGCCTACAGAGGCCAGAAGAGAGTACTTATCTGGTTATTTaGCACAGCAGAGCAGCCCTA | + |
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Preference number: 2 (lower is better) Translates to: PTCAYVQVCKCLQRPEESTYLVI*HSRAAL Trigger: TAGGGCTGCTCTGCTGTGGCAAATAACCAGATAAGT...ACTCTCTTCTGGCCTCTGTAGGCACTTGCATACCTGTACATACGCACACGTCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR-3UTR GCA 90 bp | GGCAAGTGCTCAGCCATGGAGCCATCTCTCCAGACGCATACACATTTCCCTTTATTCCTTTGTAAGAGTTaGCTTGGTCATGGCGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: GKCSAMEPSLQTHTHFPLFLCKS*LGHGVS Trigger: AGAGACGCCATGACCAAGGCAACTCTTACAAAGGAA...TAAAGGGAAATGTGTATGCGTCTGGAGAGATGGCTCCATGGCTGAGCACTTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR-3UTR TCA 90 bp | GGCAAGTGCTCAGCCATGGAGCCATCTCTCCAGACGCATACACATTTCCCTTTATTCAATGGAAGCCATTaGATACCAGAGATCACAGCA | + |
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Preference number: 2 (lower is better) Translates to: GKCSAMEPSLQTHTHFPLFNGSH*IPEITA Trigger: TGCTGTGATCTCTGGTATTCAATGGCTTCCATTGAA...TAAAGGGAAATGTGTATGCGTCTGGAGAGATGGCTCCATGGCTGAGCACTTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR-3UTR GCA 90 bp | GTCGCCTGTCCCTGGCAGATGCATGCCTTCTTTCATGAAAGCCTACACATACCACACAATTTCTTGACTTaGTGCCTCATCCAGCTAAGA | + |
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Preference number: 2 (lower is better) Translates to: VACPWQMHAFFHESLHIPHNFLT*CLIQLR Trigger: TCTTAGCTGGATGAGGCAGCAAGTCAAGAAATTGTG...TGGTATGTGTAGGCTTTCATGAAAGAAGGCATGCATCTGCCAGGGACAGGCGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR-3UTR CCA 90 bp | CCGACGTGTGCGTATGTACAGGTATGCAAGTGCCTACAGAGGCCAGAAGAGAGTCACTCAAAATTAACTTaGGTTCCCTACTTTGACCAA | + |
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Preference number: 2 (lower is better) Translates to: PTCAYVQVCKCLQRPEESHSKLT*VPYFDQ Trigger: TTGGTCAAAGTAGGGAACCCAAGTTAATTTTGAGTG...ACTCTCTTCTGGCCTCTGTAGGCACTTGCATACCTGTACATACGCACACGTCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR CAA 90 bp | CCTACACATACCAGCTTTTACAGACAAGGCATTCAATGGAAGCCATaGAATACCAGAGATCACAGCACAAAGTGGTTCAATAGCAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: PTHTSFYRQGIQWKP*NTRDHSTKWFNSKG Trigger: GCCCTTGCTATTGAACCACTTTGTGCTGTGATCTCTGGTATTCAATGGCTTCCATTGAATGCCTTGTCTGTAAAAGCTGGTATGTGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR-3UTR GCA 90 bp | CATGGAGCCATCTCTCCAGACGCATACACATTTCCCTTTAAGATCAGTCGCCTGAATTGTTTTAATGAATaGCCAAAACCTGTCCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: HGAISPDAYTFPFKISRLNCFNE*PKPVQS Trigger: GGACTGGACAGGTTTTGGGCATTCATTAAAACAATT...CAGGCGACTGATCTTAAAGGGAAATGTGTATGCGTCTGGAGAGATGGCTCCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR-3UTR TCA 90 bp | GAAACTGTCAGCCAGCCCCAAATAAAGGTTTTCCTTTGTAAGAGTTGCCTTGGTAGATTTACTCCCAAGTaGAGTCTAAAGAGAAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: ETVSQPQIKVFLCKSCLGRFTPK*SLKRSS Trigger: GGAGCTTCTCTTTAGACTTCACTTGGGAGTAAATCT...ACCAAGGCAACTCTTACAAAGGAAAACCTTTATTTGGGGCTGGCTGACAGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR GCA 72 bp | GCTCAAGATGCAGAACTCTCAGCTCCTCCTGCACCATaGCTGCCTGGATGCCGCCACGCTTCCCACCATGAT | + |
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Preference number: 3 (lower is better) Translates to: AQDAELSAPPAP*LPGCRHASHHD Trigger: ATCATGGTGGGAAGCGTGGCGGCATCCAGGCAGGCATGGTGCAGGAGGAGCTGAGAGTTCTGCATCTTGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR TCA 72 bp | TTGTTGGAGGAAGAGTGTCACTGTGGGGGCAGACTTTaGGGGCCTAGCTCCACCCAGTGCAGAAGGGACCCT | + |
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Preference number: 3 (lower is better) Translates to: LLEEECHCGGRL*GPSSTQCRRDP Trigger: AGGGTCCCTTCTGCACTGGGTGGAGCTAGGCCCTCAAAGTCTGCCCCCACAGTGACACTCTTCCTCCAACAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR TCA 72 bp | AGGAGGTTCCCCCTTGGCACCTGTCCCCAGGCTCCCTaGTATGGAGACAGTACCTCTTCAAATCCTATGGCG | + |
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Preference number: 3 (lower is better) Translates to: RRFPLGTCPQAP*YGDSTSSNPMA Trigger: CGCCATAGGATTTGAAGAGGTACTGTCTCCATATCAGGGAGCCTGGGGACAGGTGCCAAGGGGGAACCTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR TCA 72 bp | ACTGTCACCAGCCCACAGGCAGGGTGGAAGGCTTTCTaGAAGAGACAGAGAGCAAGACTCCGCTTCTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: TVTSPQAGWKAF*KRQRARLRFWL Trigger: CAGCCAGAAGCGGAGTCTTGCTCTCTGTCTCTTTCAGAAAGCCTTCCACCCTGCCTGTGGGCTGGTGACAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR GCA 72 bp | AAGATGCAGAACTCTCAGCTCCTCCTGCACCATGCCTaGCTGGATGCCGCCACGCTTCCCACCATGATGATA | + |
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Preference number: 3 (lower is better) Translates to: KMQNSQLLLHHA*LDAATLPTMMI Trigger: TATCATCATGGTGGGAAGCGTGGCGGCATCCAGGCAGGCATGGTGCAGGAGGAGCTGAGAGTTCTGCATCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR GCA 72 bp | AGCTCCACCCAGTGCAGAAGGGACCCTCCTGCTGGCTaGAAGAAGATGGTCTCCTTTTGGATGCCTGTAGCT | + |
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Preference number: 3 (lower is better) Translates to: SSTQCRRDPPAG*KKMVSFWMPVA Trigger: AGCTACAGGCATCCAAAAGGAGACCATCTTCTTGCAGCCAGCAGGAGGGTCCCTTCTGCACTGGGTGGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR-3UTR CAA 90 bp | CCGACGTGTGCGTATGTACAGGTATGCAAGTGCCTACAGAGGCCAGAAGAGAGTGCCAGGAGGTCAGTGTaGAGCTGTAGGCTAAGGACC | + |
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Preference number: 3 (lower is better) Translates to: PTCAYVQVCKCLQRPEESARRSV*SCRLRT Trigger: GGTCCTTAGCCTACAGCTCAACACTGACCTCCTGGC...ACTCTCTTCTGGCCTCTGTAGGCACTTGCATACCTGTACATACGCACACGTCGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR-3UTR CAA 90 bp | GTCGCCTGTCCCTGGCAGATGCATGCCTTCTTTCATGAAAGCCTACACATACCACGGTGGCAGGTGCAGTaGTCTGGGGCTGACAACCAA | + |
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Preference number: 3 (lower is better) Translates to: VACPWQMHAFFHESLHIPRWQVQ*SGADNQ Trigger: TTGGTTGTCAGCCCCAGACAACTGCACCTGCCACCG...TGGTATGTGTAGGCTTTCATGAAAGAAGGCATGCATCTGCCAGGGACAGGCGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR-3UTR CAA 90 bp | ATCTCCCTAGGACGCAACCCAAACCTGGCACTTGGGAGCTGCTCAGAGGTTCCCGGAGGTGTGTACTTGTaGGAGGAAGAGTGTCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: ISLGRNPNLALGSCSEVPGGVYL*EEECHC Trigger: ACAGTGACACTCTTCCTCCAACAAGTACACACCTCC...GGGAACCTCTGAGCAGCTCCCAAGTGCCAGGTTTGGGTTGCGTCCTAGGGAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| 3UTR CCA 72 bp | AAGTGGTTCAATAGCAAGGGCAAGTGCCAAGGGCTATaGGGCAAAGAGAAGGCACTGTCACCAGCCCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: KWFNSKGKCQGL*GKEKALSPAHR Trigger: CCTGTGGGCTGGTGACAGTGCCTTCTCTTTGCCCCATAGCCCTTGGCACTTGCCCTTGCTATTGAACCACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| 3UTR CCA 72 bp | GTTCCCCCTTGGCACCTGTCCCCAGGCTCCCTGATATaGAGACAGTACCTCTTCAAATCCTATGGCGATTAC | + |
|
Preference number: 3 (lower is better) Translates to: VPPWHLSPGSLI*RQYLFKSYGDY Trigger: GTAATCGCCATAGGATTTGAAGAGGTACTGTCTCCATATCAGGGAGCCTGGGGACAGGTGCCAAGGGGGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| 3UTR GCA 72 bp | TCCCACCTGCCCATCAGTCCCTACTTAAGTAGGAACTaGATCAACTTCCAGGAGGGATGTCCCTGTCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: SHLPISPYLSRN*INFQEGCPCHR Trigger: TCTGTGACAGGGACATCCCTCCTGGAAGTTGATGCAGTTCCTACTTAAGTAGGGACTGATGGGCAGGTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| 3UTR CCA 72 bp | GACCCTCCTGCTGGCTGCAAGAAGATGGTCTCCTTTTaGATGCCTGTAGCTCAAGATGCAGAACTCTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: DPPAGCKKMVSF*MPVAQDAELSA Trigger: AGCTGAGAGTTCTGCATCTTGAGCTACAGGCATCCAAAAGGAGACCATCTTCTTGCAGCCAGCAGGAGGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCAGCCAGCCCCAAATAAAGGTTTTCCTTTGTAAGAGTTGCCTTGGTCATGGCAAAGAGAAGCTCCAGTaGGCACCACCAAGTCCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: VSQPQIKVFLCKSCLGHGKEKLQ*APPSPP Trigger: TGGGGGACTTGGTGGTGCCAACTGGAGCTTCTCTTT...GCCATGACCAAGGCAACTCTTACAAAGGAAAACCTTTATTTGGGGCTGGCTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCGCCTGTCCCTGGCAGATGCATGCCTTCTTTCATGAAAGCCTACACATACCACACTTATCTGGTTATTaGCCACAGCAGAGCAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: VACPWQMHAFFHESLHIPHLSGY*PQQSSP Trigger: AGGGCTGCTCTGCTGTGGCAAATAACCAGATAAGTG...TGGTATGTGTAGGCTTTCATGAAAGAAGGCATGCATCTGCCAGGGACAGGCGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGGTCATCTGGAAGAACGGCAAGTGCTCAGCCATGGAGCCATCTCTCCAGACGATTACACAATTTCTaGACTTGCTGCCTCATCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LWSSGRTASAQPWSHLSRRLHNF*TCCLIQ Trigger: CTGGATGAGGCAGCAAGTCAAGAAATTGTGTAATCG...TCTGGAGAGATGGCTCCATGGCTGAGCACTTGCCGTTCTTCCAGATGACCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| 3UTR GCA 72 bp | ACCTCCCAGCTGACCTGGCCACATCTCTTCGCTGCCTaGCGACTTCAGAACAAGAAAATACAATGTTCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: TSQLTWPHLFAA*RLQNKKIQCSR Trigger: CCTTGAACATTGTATTTTCTTGTTCTGAAGTCGGCAGGCAGCGAAGAGATGTGGCCAGGTCAGCTGGGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| 3UTR GCA 72 bp | CTAGACCTCCCAGCTGACCTGGCCACATCTCTTCGCTaGCTGCCGACTTCAGAACAAGAAAATACAATGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LDLPADLATSLR*LPTSEQENTMF Trigger: GAACATTGTATTTTCTTGTTCTGAAGTCGGCAGGCAGCGAAGAGATGTGGCCAGGTCAGCTGGGAGGTCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| 3UTR GCA 72 bp | AATGAATGCCCAAAACCTGTCCAGTCCTCAGCAGACTaGAGGGACTCTGAGCAGGCTAAGCAAAGATCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: NECPKPVQSSAD*RDSEQAKQRSG Trigger: ACCAGATCTTTGCTTAGCCTGCTCAGAGTCCCTGCAGTCTGCTGAGGACTGGACAGGTTTTGGGCATTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| 3UTR GCA 72 bp | GATCACAGCACAAAGTGGTTCAATAGCAAGGGCAAGTaGCAAGGGCTATGGGGCAAAGAGAAGGCACTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: DHSTKWFNSKGK*QGLWGKEKALS Trigger: TGACAGTGCCTTCTCTTTGCCCCATAGCCCTTGGCACTTGCCCTTGCTATTGAACCACTTTGTGCTGTGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| 3UTR GCA 72 bp | TTTTTGCCGACGTGTGCGTATGTACAGGTATGCAAGTaGCTACAGAGGCCAGAAGAGAGTGTCAGGTCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: FLPTCAYVQVCK*LQRPEESVRSL Trigger: AAGGGACCTGACACTCTCTTCTGGCCTCTGTAGGCACTTGCATACCTGTACATACGCACACGTCGGCAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| 3UTR CCA 72 bp | ATATACATAATGAGGACTAATGAGGAGGTTCCCCCTTaGCACCTGTCCCCAGGCTCCCTGATATGGAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: IYIMRTNEEVPP*HLSPGSLIWRQ Trigger: CTGTCTCCATATCAGGGAGCCTGGGGACAGGTGCCAAGGGGGAACCTCCTCATTAGTCCTCATTATGTATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| 3UTR TCA 72 bp | AACTCAGAAATCCGCCTGCCTCTGCCTCCTAGGGAGTaGCAAGTATTAGGAGGTGTGTACTTGTTGGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: NSEIRLPLPPRE*QVLGGVYLLEE Trigger: TTCCTCCAACAAGTACACACCTCCTAATACTTGTCACTCCCTAGGAGGCAGAGGCAGGCGGATTTCTGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| 3UTR TCA 72 bp | AGTCGCCTGTCCCTGGCAGATGCATGCCTTCTTTCATaGAAGCCTACACATACCAGCTTTTACAGACAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SRLSLADACLLS*KPTHTSFYRQG Trigger: GCCTTGTCTGTAAAAGCTGGTATGTGTAGGCTTTCATGAAAGAAGGCATGCATCTGCCAGGGACAGGCGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| 3UTR TCA 72 bp | CCAAGGAAGCCACATCCCTCAAGATTTACTCCCAAGTaGAGTCTAAAGAGAAGCTCCAGTTGGCACCACCAA | + |
|
Preference number: 3 (lower is better) Translates to: PRKPHPSRFTPK*SLKRSSSWHHQ Trigger: TTGGTGGTGCCAACTGGAGCTTCTCTTTAGACTTCACTTGGGAGTAAATCTTGAGGGATGTGGCTTCCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| 3UTR GCA 72 bp | AAACCTCGTGATGGCTATGTCACTTATCTGGTTATTTaGCACAGCAGAGCAGCCCTAAGCTGGTGTAGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: KPRDGYVTYLVI*HSRAALSWCSG Trigger: ACCACTACACCAGCTTAGGGCTGCTCTGCTGTGGCAAATAACCAGATAAGTGACATAGCCATCACGAGGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAACTGTCAGCCAGCCCCAAATAAAGGTTTTCCTTTGTAAGAGTTGCCTTGGTCTTGGGTTCCCTACTTaGACCAAACTACTGATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: ETVSQPQIKVFLCKSCLGLGFPT*TKLLIW Trigger: CCAAATCAGTAGTTTGGTCAAAGTAGGGAACCCAAG...ACCAAGGCAACTCTTACAAAGGAAAACCTTTATTTGGGGCTGGCTGACAGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| 3UTR CCA 72 bp | GGTTTGAATAGGTTTGGTCCCCATGGACTCAACACTTaGCTCATAGGGAGCGACAAGTTGGTTTTTGTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: GLNRFGPHGLNT*LIGSDKLVFVF Trigger: AAAAACAAAAACCAACTTGTCGCTCCCTATGAGCCAAGTGTTGAGTCCATGGGGACCAAACCTATTCAAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| 3UTR CCA 72 bp | CTCCCTGATATGGAGACAGTACCTCTTCAAATCCTATaGCGATTACACAATTTCTTGACTTGCTGCCTCATC | + |
|
Preference number: 3 (lower is better) Translates to: LPDMETVPLQIL*RLHNFLTCCLI Trigger: GATGAGGCAGCAAGTCAAGAAATTGTGTAATCGCCATAGGATTTGAAGAGGTACTGTCTCCATATCAGGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| 3UTR TCA 72 bp | GACCAAACTACTGATTTGGAGAATTCTGCTCAGGACTaGACTTTAACCTCTGATAAACAAACCCAGCTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: DQTTDLENSAQD*TLTSDKQTQLF Trigger: AAACAGCTGGGTTTGTTTATCAGAGGTTAAAGTTCAGTCCTGAGCAGAATTCTCCAAATCAGTAGTTTGGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| 3UTR CCA 72 bp | CCTGAGAGGAATTCTGAACATCACTCAAAATTAACTTaGGTTCCCTACTTTGACCAAACTACTGATTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: PERNSEHHSKLT*VPYFDQTTDLE Trigger: CTCCAAATCAGTAGTTTGGTCAAAGTAGGGAACCCAAGTTAATTTTGAGTGATGTTCAGAATTCCTCTCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGGTCATCTGGAAGAACGGCAAGTGCTCAGCCATGGAGCCATCTCTCCAGAGCCTCCAGGAGGGCCTaGCACAGGGGCAGCCCAACG | + |
|
Preference number: 4 (lower is better) Translates to: LWSSGRTASAQPWSHLSRASRRA*HRGSPT Trigger: CGTTGGGCTGCCCCTGTGCCAGGCCCTCCTGGAGGC...TCTGGAGAGATGGCTCCATGGCTGAGCACTTGCCGTTCTTCCAGATGACCAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR GCA 90 bp | ATCTCCCTAGGACGCAACCCAAACCTGGCACTTGGGAGCTGCTCAGAGGTTCCCGACTTGCTGGCCTCCTaGAGGGTGGTCAGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ISLGRNPNLALGSCSEVPDLLAS*RVVSSS Trigger: GGAGCTGCTGACCACCCTGCAGGAGGCCAGCAAGTC...GGGAACCTCTGAGCAGCTCCCAAGTGCCAGGTTTGGGTTGCGTCCTAGGGAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR CCA 90 bp | ATCTCCCTAGGACGCAACCCAAACCTGGCACTTGGGAGCTGCTCAGAGGTTCCCCTGGCAGTTCTCCCCTaGGGACTTGCTGGCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISLGRNPNLALGSCSEVPLAVLP*GLAGLL Trigger: CAGGAGGCCAGCAAGTCCCCAGGGGAGAACTGCCAG...GGGAACCTCTGAGCAGCTCCCAAGTGCCAGGTTTGGGTTGCGTCCTAGGGAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR TCA 90 bp | GGACGCAACCCAAACCTGGCACTTGGGAGCTGCTCAGAGGTTCCCATAGGAGAGTTGGATCCGCTGCCCTaGGCTTTGACAGGCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GRNPNLALGSCSEVPIGELDPLP*ALTGSP Trigger: AGGGCTGCCTGTCAAAGCTCAGGGCAGCGGATCCAA...CTCTCCTATGGGAACCTCTGAGCAGCTCCCAAGTGCCAGGTTTGGGTTGCGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR TCA 90 bp | AATAGAACCCCGACTAAGACAGCTGAGGGTCTCACACCCACTCTCAGGAGCAGACGCTGCCCTGAGCTTTaGCAGGCAGCCCTCGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: NRTPTKTAEGLTPTLRSRRCPEL*QAALDA Trigger: GGCATCGAGGGCTGCCTGTCAAAGCTCAGGGCAGCG...TCTGCTCCTGAGAGTGGGTGTGAGACCCTCAGCTGTCTTAGTCGGGGTTCTATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR TCA 90 bp | GGACGCAACCCAAACCTGGCACTTGGGAGCTGCTCAGAGGTTCCCATAGGAGAGCAGGTCATGGCCGCGTaGATCAGCAGCTGGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GRNPNLALGSCSEVPIGEQVMAA*ISSWLK Trigger: CTTCAACCAGCTGCTGATTCACGCGGCCATGACCTG...CTCTCCTATGGGAACCTCTGAGCAGCTCCCAAGTGCCAGGTTTGGGTTGCGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR CCA 90 bp | AGGAACTGCATCAACTTCCAGGAGGGATGTCCCTGTCACAGAAGCAGGAGATGGTCAGCAGCTCCCGGGTaGTCTGGAGGTCCCGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RNCINFQEGCPCHRSRRWSAAPG*SGGPVH Trigger: GTGCACGGGACCTCCAGACCACCCGGGAGCTGCTGA...CCATCTCCTGCTTCTGTGACAGGGACATCCCTCCTGGAAGTTGATGCAGTTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCCATCTCCCTAGGACGCAACCCAAACCTGGCACTTGGGAGCTGCTCAGAGTGGAGGTGCAGGTCATaGCCGCGTGAATCAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KPISLGRNPNLALGSCSEWRCRS*PRESAA Trigger: AGCTGCTGATTCACGCGGCCATGACCTGCACCTCCA...CTCTGAGCAGCTCCCAAGTGCCAGGTTTGGGTTGCGTCCTAGGGAGATGGGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR TCA 90 bp | GGACGCAACCCAAACCTGGCACTTGGGAGCTGCTCAGAGGTTCCCATAGGAGAGGAGGCCATCAGGAAGTaGGCATCGTTGAACAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRNPNLALGSCSEVPIGEEAIRK*ASLNRR Trigger: CCTCCTGTTCAACGATGCTCACTTCCTGATGGCCTC...CTCTCCTATGGGAACCTCTGAGCAGCTCCCAAGTGCCAGGTTTGGGTTGCGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR TCA 90 bp | CCGACGTGTGCGTATGTACAGGTATGCAAGTGCCTACAGAGGCCAGAAGAGAGTCCGCTCCGTCAGGGGTaGGTTGGGTTTCAAGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: PTCAYVQVCKCLQRPEESPLRQG*VGFQGV Trigger: GACGCCTTGAAACCCAACTCACCCCTGACGGAGCGG...ACTCTCTTCTGGCCTCTGTAGGCACTTGCATACCTGTACATACGCACACGTCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR GCA 90 bp | AAGAACGGCAAGTGCTCAGCCATGGAGCCATCTCTCCAGACGCATACACATTTCTCTCCCCTGGGGACTTaGTGGCCTCCTGCAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KNGKCSAMEPSLQTHTHFSPLGT*WPPAGW Trigger: CCACCCTGCAGGAGGCCAGCAAGTCCCCAGGGGAGA...GAAATGTGTATGCGTCTGGAGAGATGGCTCCATGGCTGAGCACTTGCCGTTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR CCA 90 bp | GGCAAGTGCTCAGCCATGGAGCCATCTCTCCAGACGCATACACATTTCCCTTTACCCCTGGGGACTTGCTaGCCTCCTGCAGGGTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GKCSAMEPSLQTHTHFPLPLGTC*PPAGWS Trigger: TGACCACCCTGCAGGAGGCCAGCAAGTCCCCAGGGG...TAAAGGGAAATGTGTATGCGTCTGGAGAGATGGCTCCATGGCTGAGCACTTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCCATCTCCCTAGGACGCAACCCAAACCTGGCACTTGGGAGCTGCTCAGAGGAATCAGCAGCTGGTTaGAGACATCTCTCTGGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KPISLGRNPNLALGSCSEESAAG*RHLSGR Trigger: ACGCCCAGAGAGATGTCTTCAACCAGCTGCTGATTC...CTCTGAGCAGCTCCCAAGTGCCAGGTTTGGGTTGCGTCCTAGGGAGATGGGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR GCA 90 bp | GGACGCAACCCAAACCTGGCACTTGGGAGCTGCTCAGAGGTTCCCATAGGAGAGACGTGGGCCACAGTGTaGACTGACCATGCATCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GRNPNLALGSCSEVPIGETWATV*TDHASV Trigger: AACAGATGCATGGTCAGTGCACACTGTGGCCCACGT...CTCTCCTATGGGAACCTCTGAGCAGCTCCCAAGTGCCAGGTTTGGGTTGCGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGGTCATCTGGAAGAACGGCAAGTGCTCAGCCATGGAGCCATCTCTCCAGAGGGAAAGCTCCACCATaGTCTTCACAGCCAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LWSSGRTASAQPWSHLSRGKAPP*SSQPGP Trigger: TGGCCCTGGCTGTGAAGACCATGGTGGAGCTTTCCC...TCTGGAGAGATGGCTCCATGGCTGAGCACTTGCCGTTCTTCCAGATGACCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR CCA 90 bp | GGACGCAACCCAAACCTGGCACTTGGGAGCTGCTCAGAGGTTCCCATAGGAGAGACGTCTTTTGCCAACTaGTGCTGGCAGTTCTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GRNPNLALGSCSEVPIGETSFAN*CWQFSP Trigger: AGGGGAGAACTGCCAGCACCAGTTGGCAAAAGACGT...CTCTCCTATGGGAACCTCTGAGCAGCTCCCAAGTGCCAGGTTTGGGTTGCGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR CCA 90 bp | AATAGAACCCCGACTAAGACAGCTGAGGGTCTCACACCCACTCTCAGGAGCAGACACTGGCCTGCAGGCTaGGGAGTATGTGGCTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NRTPTKTAEGLTPTLRSRHWPAG*GVCGCH Trigger: ATGACAGCCACATACTCCCCAGCCTGCAGGCCAGTG...TCTGCTCCTGAGAGTGGGTGTGAGACCCTCAGCTGTCTTAGTCGGGGTTCTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR TCA 90 bp | CATGCATCTGTTGGCTCAATAGATAAAGCCTCTTTGGCAAGCTTTTGTGCCTGGCGCTGCCCTGAGCTTTaGCAGGCAGCCCTCGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: HASVGSIDKASLASFCAWRCPEL*QAALDA Trigger: GGCATCGAGGGCTGCCTGTCAAAGCTCAGGGCAGCG...CCAGGCACAAAAGCTTGCCAAAGAGGCTTTATCTATTGAGCCAACAGATGCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124011.2 |
||
| CDS-3UTR GCA 90 bp | AGGAACTGCATCAACTTCCAGGAGGGATGTCCCTGTCACAGAAGCAGGAGATGGTGTGTACACTGGAGGTaGAGGTCATGGCCGCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RNCINFQEGCPCHRSRRWCVHWR*RSWPRE Trigger: TTCACGCGGCCATGACCTGCACCTCCAGTGTACACA...CCATCTCCTGCTTCTGTGACAGGGACATCCCTCCTGGAAGTTGATGCAGTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCCCAAATAAAGGTTTTCCTTTGTAAGAGTTGCCTTGGTCATGGCGTCTCTACAGTCTGCCACCGCTaGCCAAGGGGCACCCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QPQIKVFLCKSCLGHGVSTVCHR*PRGTPS Trigger: GGAAGGGGTGCCCCTTGGCCAGCGGTGGCAGACTGT...AGAGACGCCATGACCAAGGCAACTCTTACAAAGGAAAACCTTTATTTGGGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| 3UTR CAA 72 bp | GGACCCTCCTGCTGGCTGCAAGAAGATGGTCTCCTTTaGGATGCCTGTAGCTCAAGATGCAGAACTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GPSCWLQEDGLL*DACSSRCRTLS Trigger: GCTGAGAGTTCTGCATCTTGAGCTACAGGCATCCAAAAGGAGACCATCTTCTTGCAGCCAGCAGGAGGGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR TCA 90 bp | AATAGAACCCCGACTAAGACAGCTGAGGGTCTCACACCCACTCTCAGGAGCAGAGGAAGTGAGCATCGTTaGACAGGAGGATGTGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NRTPTKTAEGLTPTLRSRGSEHR*TGGCGL Trigger: GAGACCACATCCTCCTGTTCAACGATGCTCACTTCC...TCTGCTCCTGAGAGTGGGTGTGAGACCCTCAGCTGTCTTAGTCGGGGTTCTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGGTCATCTGGAAGAACGGCAAGTGCTCAGCCATGGAGCCATCTCTCCAGAGCTTGCAGGCTTCATTaGTTGTGGTTGAGAGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LWSSGRTASAQPWSHLSRACRLH*LWLRVG Trigger: TCCCACTCTCAACCACAAGCAATGAAGCCTGCAAGC...TCTGGAGAGATGGCTCCATGGCTGAGCACTTGCCGTTCTTCCAGATGACCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCCCAAATAAAGGTTTTCCTTTGTAAGAGTTGCCTTGGTCATGGCGTCTCTCCACCACGTCCAGCATaGTACCACTGGCCTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QPQIKVFLCKSCLGHGVSPPRPA*YHWPAG Trigger: GCCTGCAGGCCAGTGGTACCATGCTGGACGTGGTGG...AGAGACGCCATGACCAAGGCAACTCTTACAAAGGAAAACCTTTATTTGGGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| 3UTR CAA 72 bp | ATTTACTCCCAAGTGAAGTCTAAAGAGAAGCTCCAGTaGGCACCACCAAGTCCCCCAGGGAGGCAGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IYSQVKSKEKLQ*APPSPPGRQKA Trigger: TGCCTTCTGCCTCCCTGGGGGACTTGGTGGTGCCAACTGGAGCTTCTCTTTAGACTTCACTTGGGAGTAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR TCA 90 bp | CATGCATCTGTTGGCTCAATAGATAAAGCCTCTTTGGCAAGCTTTTGTGCCTGGTTGGATCCGCTGCCCTaGGCTTTGACAGGCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HASVGSIDKASLASFCAWLDPLP*ALTGSP Trigger: AGGGCTGCCTGTCAAAGCTCAGGGCAGCGGATCCAA...CCAGGCACAAAAGCTTGCCAAAGAGGCTTTATCTATTGAGCCAACAGATGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124011.2 |
||
| CDS-3UTR TCA 90 bp | GTAGTCAACGGGACCAATTGTTTTAATGAATGCCCAAAACCTGTCCAGTCCTCAGTCCCGTGCACCCAGTaGGGCCATCAGGAAGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VVNGTNCFNECPKPVQSSVPCTQ*GHQEVS Trigger: GCTCACTTCCTGATGGCCTCACTGGGTGCACGGGAC...TGAGGACTGGACAGGTTTTGGGCATTCATTAAAACAATTGGTCCCGTTGACTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS-3UTR GCA 90 bp | AAGAACGGCAAGTGCTCAGCCATGGAGCCATCTCTCCAGACGCATACACATTTCATGTGGTCTCGGGTGTaGTTCTGGGTCACAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: KNGKCSAMEPSLQTHTHFMWSRV*FWVTGR Trigger: TCTACCTGTGACCCAGAAGCACACCCGAGACCACAT...GAAATGTGTATGCGTCTGGAGAGATGGCTCCATGGCTGAGCACTTGCCGTTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR CCA 90 bp | GGCAAGTGCTCAGCCATGGAGCCATCTCTCCAGACGCATACACATTTCCCTTTATCTCGGGTGTGCTTCTaGGTCACAGGTAGAACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GKCSAMEPSLQTHTHFPLSRVCF*VTGRTV Trigger: GACTGTTCTACCTGTGACCCAGAAGCACACCCGAGA...TAAAGGGAAATGTGTATGCGTCTGGAGAGATGGCTCCATGGCTGAGCACTTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS-3UTR CCA 90 bp | GTCAGCCAGCCCCAAATAAAGGTTTTCCTTTGTAAGAGTTGCCTTGGTCATGGCTTTGCCAACTGGTGCTaGCAGTTCTCCCCTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VSQPQIKVFLCKSCLGHGFANWC*QFSPGD Trigger: GTCCCCAGGGGAGAACTGCCAGCACCAGTTGGCAAA...GCCATGACCAAGGCAACTCTTACAAAGGAAAACCTTTATTTGGGGCTGGCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR CCA 90 bp | GTCAGCCAGCCCCAAATAAAGGTTTTCCTTTGTAAGAGTTGCCTTGGTCATGGCAACATGTCTGTCGGGTaGTCCCGGAGGATCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSQPQIKVFLCKSCLGHGNMSVG*SRRICS Trigger: GGAACAGATCCTCCGGGACCACCCGACAGACATGTT...GCCATGACCAAGGCAACTCTTACAAAGGAAAACCTTTATTTGGGGCTGGCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR CCA 90 bp | AAGAACGGCAAGTGCTCAGCCATGGAGCCATCTCTCCAGACGCATACACATTTCCTCATTTCATGTACGTaGGCCACAGTGTGCACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KNGKCSAMEPSLQTHTHFLISCT*ATVCTD Trigger: GTCAGTGCACACTGTGGCCCACGTACATGAAATGAG...GAAATGTGTATGCGTCTGGAGAGATGGCTCCATGGCTGAGCACTTGCCGTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR GCA 90 bp | GTCAGCCAGCCCCAAATAAAGGTTTTCCTTTGTAAGAGTTGCCTTGGTCATGGCCAGCCCAACGTCTTTTaGCAACTGGTGCTGGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VSQPQIKVFLCKSCLGHGQPNVF*QLVLAV Trigger: AACTGCCAGCACCAGTTGGCAAAAGACGTTGGGCTG...GCCATGACCAAGGCAACTCTTACAAAGGAAAACCTTTATTTGGGGCTGGCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR CCA 90 bp | GTCGCCTGTCCCTGGCAGATGCATGCCTTCTTTCATGAAAGCCTACACATACCATGTGGCTGTCATAGATaGTTAGTGCGGCCTCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: VACPWQMHAFFHESLHIPCGCHR*LVRPHS Trigger: ACTATGAGGCCGCACTAACCATCTATGACAGCCACA...TGGTATGTGTAGGCTTTCATGAAAGAAGGCATGCATCTGCCAGGGACAGGCGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR GCA 90 bp | CATGCATCTGTTGGCTCAATAGATAAAGCCTCTTTGGCAAGCTTTTGTGCCTGGACAGGCAGCCCTCGATaGCACCAAGACTCTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HASVGSIDKASLASFCAWTGSPR*HQDSCH Trigger: ATGACAAGAGTCTTGGTGGCATCGAGGGCTGCCTGT...CCAGGCACAAAAGCTTGCCAAAGAGGCTTTATCTATTGAGCCAACAGATGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124011.2 |
||
| CDS-3UTR CCA 90 bp | CATGCATCTGTTGGCTCAATAGATAAAGCCTCTTTGGCAAGCTTTTGTGCCTGGCGTACTGAGTCAAGGTaGCATCGAACAGCTTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HASVGSIDKASLASFCAWRTESR*HRTACR Trigger: CCTGCAAGCTGTTCGATGCCACCTTGACTCAGTACG...CCAGGCACAAAAGCTTGCCAAAGAGGCTTTATCTATTGAGCCAACAGATGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124011.2 |
||
| CDS-3UTR GCA 90 bp | CATGCATCTGTTGGCTCAATAGATAAAGCCTCTTTGGCAAGCTTTTGTGCCTGGGCTTGCAGGCTTCATTaGTTGTGGTTGAGAGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HASVGSIDKASLASFCAWACRLH*LWLRVG Trigger: TCCCACTCTCAACCACAAGCAATGAAGCCTGCAAGC...CCAGGCACAAAAGCTTGCCAAAGAGGCTTTATCTATTGAGCCAACAGATGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124011.2 |
||
| CDS-3UTR GCA 90 bp | ACTTCAGAACAAGAAAATACAATGTTCAAGGCACCTGAAAATGATAGCCACTGCACAGGCAGCCCTCGATaGCACCAAGACTCTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TSEQENTMFKAPENDSHCTGSPR*HQDSCH Trigger: ATGACAAGAGTCTTGGTGGCATCGAGGGCTGCCTGT...GCAGTGGCTATCATTTTCAGGTGCCTTGAACATTGTATTTTCTTGTTCTGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR CCA 90 bp | ACTTCAGAACAAGAAAATACAATGTTCAAGGCACCTGAAAATGATAGCCACTGCCGTACTGAGTCAAGGTaGCATCGAACAGCTTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSEQENTMFKAPENDSHCRTESR*HRTACR Trigger: CCTGCAAGCTGTTCGATGCCACCTTGACTCAGTACG...GCAGTGGCTATCATTTTCAGGTGCCTTGAACATTGTATTTTCTTGTTCTGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR GCA 90 bp | GTAGTCAACGGGACCAATTGTTTTAATGAATGCCCAAAACCTGTCCAGTCCTCATTTGGCAAGCTTTTGTaGCTGGTCATAGAAGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VVNGTNCFNECPKPVQSSFGKLL*LVIEVG Trigger: ACCAACTTCTATGACCAGGCACAAAAGCTTGCCAAA...TGAGGACTGGACAGGTTTTGGGCATTCATTAAAACAATTGGTCCCGTTGACTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR CAA 72 bp | GTACCTCTTCAAATCCTATGGCGATTACACAATTTCTaGACTTGCTGCCTCATCCAGCTAAGATTAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VPLQILWRLHNF*TCCLIQLRLEK Trigger: CTTCTCTAATCTTAGCTGGATGAGGCAGCAAGTCAAGAAATTGTGTAATCGCCATAGGATTTGAAGAGGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| 3UTR CAA 72 bp | ACCAGCTTTTACAGACAAGGCATTCAATGGAAGCCATaGAATACCAGAGATCACAGCACAAAGTGGTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TSFYRQGIQWKP*NTRDHSTKWFN Trigger: ATTGAACCACTTTGTGCTGTGATCTCTGGTATTCAATGGCTTCCATTGAATGCCTTGTCTGTAAAAGCTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS CCA 90 bp | GCTGCTCCCGAGGCGTCAGAGTCTGGGTTTGGGAAAGCTCCACCATaGTCTTCACAGCCAGGGCCAGGTCTTTGTCCAGCGCCACGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AAPEASESGFGKAPP*SSQPGPGLCPAPRR Trigger: CCTCCGTGGCGCTGGACAAAGACCTGGCCCTGGCTGTGAAGACCATGGTGGAGCTTTCCCAAACCCAGACTCTGACGCCTCGGGAGCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS TCA 90 bp | GGTGGTCAGCAGCTCCCGGGTGGTCTGGAGGTCCCGTGCACCCAGTaGGGCCATCAGGAAGTGAGCATCGTTGAACAGGAGGATGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GGQQLPGGLEVPCTQ*GHQEVSIVEQEDVV Trigger: GACCACATCCTCCTGTTCAACGATGCTCACTTCCTGATGGCCTCACTGGGTGCACGGGACCTCCAGACCACCCGGGAGCTGCTGACCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR CAA 90 bp | AAGCCCATCTCCCTAGGACGCAACCCAAACCTGGCACTTGGGAGCTGCTCAGAGGCCAGGGCCAGGTCTTaGTCCAGCGCCACGGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: KPISLGRNPNLALGSCSEARARS*SSATEV Trigger: AACCTCCGTGGCGCTGGACAAAGACCTGGCCCTGGC...CTCTGAGCAGCTCCCAAGTGCCAGGTTTGGGTTGCGTCCTAGGGAGATGGGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS TCA 90 bp | CGGGTGGTCTGGAGGTCCCGTGCACCCAGTGAGGCCATCAGGAAGTaGGCATCGTTGAACAGGAGGATGTGGTCTCGGGTGTGCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RVVWRSRAPSEAIRK*ASLNRRMWSRVCFW Trigger: CCAGAAGCACACCCGAGACCACATCCTCCTGTTCAACGATGCTCACTTCCTGATGGCCTCACTGGGTGCACGGGACCTCCAGACCACCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS CCA 90 bp | ATCTCCACCGCAGACACATGCAGCTGCTCCCGAGGCGTCAGAGTCTaGGTTTGGGAAAGCTCCACCATGGTCTTCACAGCCAGGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ISTADTCSCSRGVRV*VWESSTMVFTARAR Trigger: CCTGGCCCTGGCTGTGAAGACCATGGTGGAGCTTTCCCAAACCCAGACTCTGACGCCTCGGGAGCAGCTGCATGTGTCTGCGGTGGAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS CCA 90 bp | ACCGCTGGCCAAGGGGCACCCCTTCCATCTGAAGACGGTAGAGCATaGAACAGCTGTCCACCACGTCCAGCATGGTACCACTGGCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TAGQGAPLPSEDGRA*NSCPPRPAWYHWPA Trigger: TGCAGGCCAGTGGTACCATGCTGGACGTGGTGGACAGCTGTTCCATGCTCTACCGTCTTCAGATGGAAGGGGTGCCCCTTGGCCAGCGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS CCA 90 bp | TCTAAGACTCGGTCAGGGTTTCCGTTCTCAGCCTCCAGGAGGGCCTaGCACAGGGGCAGCCCAACGTCTTTTGCCAACTGGTGCTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SKTRSGFPFSASRRA*HRGSPTSFANWCWQ Trigger: CTGCCAGCACCAGTTGGCAAAAGACGTTGGGCTGCCCCTGTGCCAGGCCCTCCTGGAGGCTGAGAACGGAAACCCTGACCGAGTCTTAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS GCA 90 bp | GCTCTGGGGAAGTTCCCCTTGGCAAACATCTCCACCGCAGACACATaGAGCTGCTCCCGAGGCGTCAGAGTCTGGGTTTGGGAAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ALGKFPLANISTADT*SCSRGVRVWVWESS Trigger: GGAGCTTTCCCAAACCCAGACTCTGACGCCTCGGGAGCAGCTGCATGTGTCTGCGGTGGAGATGTTTGCCAAGGGGAACTTCCCCAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS CCA 90 bp | ACCGCAGACACATGCAGCTGCTCCCGAGGCGTCAGAGTCTGGGTTTaGGAAAGCTCCACCATGGTCTTCACAGCCAGGGCCAGGTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TADTCSCSRGVRVWV*ESSTMVFTARARSL Trigger: CAAAGACCTGGCCCTGGCTGTGAAGACCATGGTGGAGCTTTCCCAAACCCAGACTCTGACGCCTCGGGAGCAGCTGCATGTGTCTGCGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS TCA 90 bp | GATGGCAAGGCCCATGGCAAAGGTTGGATCCGCTGCCCTGAGCTTTaGCAGGCAGCCCTCGATGCCACCAAGACTCTTGTCATTGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: DGKAHGKGWIRCPEL*QAALDATKTLVIGP Trigger: TGGACCAATGACAAGAGTCTTGGTGGCATCGAGGGCTGCCTGTCAAAGCTCAGGGCAGCGGATCCAACCTTTGCCATGGGCCTTGCCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS-3UTR CAA 90 bp | GTTCCCCCTTGGCACCTGTCCCCAGGCTCCCTGATATGGAGACAGTACCTCTTCTGCAGGCTTCATTGCTaGTGGTTGAGAGTGGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VPPWHLSPGSLIWRQYLFCRLHC*WLRVGA Trigger: GGCTCCCACTCTCAACCACAAGCAATGAAGCCTGCA...GAAGAGGTACTGTCTCCATATCAGGGAGCCTGGGGACAGGTGCCAAGGGGGAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS-3UTR CAA 90 bp | AAGCCCATCTCCCTAGGACGCAACCCAAACCTGGCACTTGGGAGCTGCTCAGAGCTCCGGGCTACATTCTaGTGTACACTGGAGGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KPISLGRNPNLALGSCSELRATF*CTLEVQ Trigger: CTGCACCTCCAGTGTACACAAGAATGTAGCCCGGAG...CTCTGAGCAGCTCCCAAGTGCCAGGTTTGGGTTGCGTCCTAGGGAGATGGGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS TCA 90 bp | GTACACTGGAGGTGCAGGTCATGGCCGCGTGAATCAGCAGCTGGTTaGAGACATCTCTCTGGGCGTTGCTGCCCCCAATCTGGACAATTC | + |
|
Preference number: 5 (lower is better) Translates to: VHWRCRSWPRESAAG*RHLSGRCCPQSGQF Trigger: GAATTGTCCAGATTGGGGGCAGCAACGCCCAGAGAGATGTCTTCAACCAGCTGCTGATTCACGCGGCCATGACCTGCACCTCCAGTGTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS CCA 90 bp | GGTAGAGCATGGAACAGCTGTCCACCACGTCCAGCATGGTACCACTaGCCTGCAGGCTGGGGAGTATGTGGCTGTCATAGATGGTTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GRAWNSCPPRPAWYH*PAGWGVCGCHRWLV Trigger: CACTAACCATCTATGACAGCCACATACTCCCCAGCCTGCAGGCCAGTGGTACCATGCTGGACGTGGTGGACAGCTGTTCCATGCTCTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS CCA 90 bp | TCTGAAGACGGTAGAGCATGGAACAGCTGTCCACCACGTCCAGCATaGTACCACTGGCCTGCAGGCTGGGGAGTATGTGGCTGTCATAGA | + |
|
Preference number: 5 (lower is better) Translates to: SEDGRAWNSCPPRPA*YHWPAGWGVCGCHR Trigger: TCTATGACAGCCACATACTCCCCAGCCTGCAGGCCAGTGGTACCATGCTGGACGTGGTGGACAGCTGTTCCATGCTCTACCGTCTTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR CAA 90 bp | CATGGAGCCATCTCTCCAGACGCATACACATTTCCCTTTAAGATCAGTCGCCTGTTCTCCCCTGGGGACTaGCTGGCCTCCTGCAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: HGAISPDAYTFPFKISRLFSPGD*LASCRV Trigger: CACCCTGCAGGAGGCCAGCAAGTCCCCAGGGGAGAA...CAGGCGACTGATCTTAAAGGGAAATGTGTATGCGTCTGGAGAGATGGCTCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS CCA 90 bp | ACTGAGTCAAGGTGGCATCGAACAGCTTGCAGGCTTCATTGCTTGTaGTTGAGAGTGGGAGCCCAGCATTCTTCCACGCCTGGCAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TESRWHRTACRLHCL*LRVGAQHSSTPGSL Trigger: GAGACTGCCAGGCGTGGAAGAATGCTGGGCTCCCACTCTCAACCACAAGCAATGAAGCCTGCAAGCTGTTCGATGCCACCTTGACTCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124011.2 ENSMUST00000146088.8 |
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| CDS-3UTR CAA 90 bp | GGACGCAACCCAAACCTGGCACTTGGGAGCTGCTCAGAGGTTCCCATAGGAGAGATGCCACCAAGACTCTaGTCATTGGTCCACTTGACG | + |
|
Preference number: 5 (lower is better) Translates to: GRNPNLALGSCSEVPIGEMPPRL*SLVHLT Trigger: CGTCAAGTGGACCAATGACAAGAGTCTTGGTGGCAT...CTCTCCTATGGGAACCTCTGAGCAGCTCCCAAGTGCCAGGTTTGGGTTGCGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR CAA 90 bp | CTCTGGTCATCTGGAAGAACGGCAAGTGCTCAGCCATGGAGCCATCTCTCCAGACGTCAGAGTCTGGGTTaGGGAAAGCTCCACCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: LWSSGRTASAQPWSHLSRRQSLG*GKLHHG Trigger: ACCATGGTGGAGCTTTCCCAAACCCAGACTCTGACG...TCTGGAGAGATGGCTCCATGGCTGAGCACTTGCCGTTCTTCCAGATGACCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS CCA 90 bp | TGGTACCACTGGCCTGCAGGCTGGGGAGTATGTGGCTGTCATAGATaGTTAGTGCGGCCTCATAGTCTCCCTTTTCAATCAAGTACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: WYHWPAGWGVCGCHR*LVRPHSLPFQSSTG Trigger: CCCTGTACTTGATTGAAAAGGGAGACTATGAGGCCGCACTAACCATCTATGACAGCCACATACTCCCCAGCCTGCAGGCCAGTGGTACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS CCA 90 bp | AGCAGCTGGTTGAAGACATCTCTCTGGGCGTTGCTGCCCCCAATCTaGACAATTCGGTATCGGATTGGCAAGAGGAGTTCTAAGACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SSWLKTSLWALLPPI*TIRYRIGKRSSKTR Trigger: CCGAGTCTTAGAACTCCTCTTGCCAATCCGATACCGAATTGTCCAGATTGGGGGCAGCAACGCCCAGAGAGATGTCTTCAACCAGCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS-3UTR CAA 90 bp | GGACGCAACCCAAACCTGGCACTTGGGAGCTGCTCAGAGGTTCCCATAGGAGAGCAATTCGGTATCGGATaGGCAAGAGGAGTTCTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GRNPNLALGSCSEVPIGEQFGIG*ARGVLR Trigger: TCTTAGAACTCCTCTTGCCAATCCGATACCGAATTG...CTCTCCTATGGGAACCTCTGAGCAGCTCCCAAGTGCCAGGTTTGGGTTGCGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR CAA 90 bp | GGCAAGTGCTCAGCCATGGAGCCATCTCTCCAGACGCATACACATTTCCCTTTACTTCATTGCTTGTGGTaGAGAGTGGGAGCCCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GKCSAMEPSLQTHTHFPLLHCLW*RVGAQH Trigger: ATGCTGGGCTCCCACTCTCAACCACAAGCAATGAAG...TAAAGGGAAATGTGTATGCGTCTGGAGAGATGGCTCCATGGCTGAGCACTTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR CAA 90 bp | CATGCATCTGTTGGCTCAATAGATAAAGCCTCTTTGGCAAGCTTTTGTGCCTGGTGCAGGCTTCATTGCTaGTGGTTGAGAGTGGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: HASVGSIDKASLASFCAWCRLHC*WLRVGA Trigger: GGCTCCCACTCTCAACCACAAGCAATGAAGCCTGCA...CCAGGCACAAAAGCTTGCCAAAGAGGCTTTATCTATTGAGCCAACAGATGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124011.2 |
||
| CDS-3UTR CAA 90 bp | AATAGAACCCCGACTAAGACAGCTGAGGGTCTCACACCCACTCTCAGGAGCAGAATAGATAAAGCCTCTTaGGCAAGCTTTTGTGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NRTPTKTAEGLTPTLRSRIDKAS*ASFCAW Trigger: CCAGGCACAAAAGCTTGCCAAAGAGGCTTTATCTAT...TCTGCTCCTGAGAGTGGGTGTGAGACCCTCAGCTGTCTTAGTCGGGGTTCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS GCA 90 bp | CCGTCTTTGATCTCGGCTCTCATTTCATGTACGTGGGCCACAGTGTaGACTGACCATGCATCTGTTGGCTCAATAGATAAAGCCTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PSLISALISCTWATV*TDHASVGSIDKASL Trigger: CAAAGAGGCTTTATCTATTGAGCCAACAGATGCATGGTCAGTGCACACTGTGGCCCACGTACATGAAATGAGAGCCGAGATCAAAGACGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
||
| CDS-3UTR CAA 90 bp | CATGCATCTGTTGGCTCAATAGATAAAGCCTCTTTGGCAAGCTTTTGTGCCTGGCTTCATTGCTTGTGGTaGAGAGTGGGAGCCCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: HASVGSIDKASLASFCAWLHCLW*RVGAQH Trigger: ATGCTGGGCTCCCACTCTCAACCACAAGCAATGAAG...CCAGGCACAAAAGCTTGCCAAAGAGGCTTTATCTATTGAGCCAACAGATGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124011.2 |
||
| CDS-3UTR CAA 90 bp | CATGCATCTGTTGGCTCAATAGATAAAGCCTCTTTGGCAAGCTTTTGTGCCTGGGTGGCATCGAACAGCTaGCAGGCTTCATTGCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: HASVGSIDKASLASFCAWVASNS*QASLLV Trigger: CACAAGCAATGAAGCCTGCAAGCTGTTCGATGCCAC...CCAGGCACAAAAGCTTGCCAAAGAGGCTTTATCTATTGAGCCAACAGATGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124011.2 |
||
| CDS-3UTR CAA 90 bp | GTCGCCTGTCCCTGGCAGATGCATGCCTTCTTTCATGAAAGCCTACACATACCACTCTTTGGCAAGCTTTaGTGCCTGGTCATAGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: VACPWQMHAFFHESLHIPLFGKL*CLVIEV Trigger: AACTTCTATGACCAGGCACAAAAGCTTGCCAAAGAG...TGGTATGTGTAGGCTTTCATGAAAGAAGGCATGCATCTGCCAGGGACAGGCGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS-3UTR CAA 90 bp | CATGCATCTGTTGGCTCAATAGATAAAGCCTCTTTGGCAAGCTTTTGTGCCTGGATGCCACCAAGACTCTaGTCATTGGTCCACTTGACG | + |
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Preference number: 5 (lower is better) Translates to: HASVGSIDKASLASFCAWMPPRL*SLVHLT Trigger: CGTCAAGTGGACCAATGACAAGAGTCTTGGTGGCAT...CCAGGCACAAAAGCTTGCCAAAGAGGCTTTATCTATTGAGCCAACAGATGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124011.2 |
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| CDS TCA 72 bp | AGCGGCCGCCCTTCGGATCAGCCGCTCCGTCAGGGGTaGGTTGGGTTTCAAGGCGTCACGCTCCATCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: SGRPSDQPLRQG*VGFQGVTLHQK Trigger: CTTCTGATGGAGCGTGACGCCTTGAAACCCAACTCACCCCTGACGGAGCGGCTGATCCGAAGGGCGGCCGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS CCA 72 bp | CCGCCCTTCGGATCAGCCGCTCCGTCAGGGGTGAGTTaGGTTTCAAGGCGTCACGCTCCATCAGAAGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: PPFGSAAPSGVS*VSRRHAPSEGS Trigger: GGAGCCTTCTGATGGAGCGTGACGCCTTGAAACCCAACTCACCCCTGACGGAGCGGCTGATCCGAAGGGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS CAA 72 bp | GCCGCCCTTCGGATCAGCCGCTCCGTCAGGGGTGAGTaGGGTTTCAAGGCGTCACGCTCCATCAGAAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: AALRISRSVRGE*GFKASRSIRRL Trigger: GAGCCTTCTGATGGAGCGTGACGCCTTGAAACCCAACTCACCCCTGACGGAGCGGCTGATCCGAAGGGCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS CAA 90 bp | GTTTGGGAAAGCTCCACCATGGTCTTCACAGCCAGGGCCAGGTCTTaGTCCAGCGCCACGGAGGTTCCCGTGCCAACGAGCACAAGGCCG | + |
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Preference number: 6 (lower is better) Translates to: VWESSTMVFTARARS*SSATEVPVPTSTRP Trigger: CGGCCTTGTGCTCGTTGGCACGGGAACCTCCGTGGCGCTGGACAAAGACCTGGCCCTGGCTGTGAAGACCATGGTGGAGCTTTCCCAAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS TCA 72 bp | CAGCTCCCGGGTGGTCTGGAGGTCCCGTGCACCCAGTaGGGCCATCAGGAAGTGAGCATCGTTGAACAGGAG | + |
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Preference number: 6 (lower is better) Translates to: QLPGGLEVPCTQ*GHQEVSIVEQE Trigger: CTCCTGTTCAACGATGCTCACTTCCTGATGGCCTCACTGGGTGCACGGGACCTCCAGACCACCCGGGAGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS CCA 72 bp | ACATGCAGCTGCTCCCGAGGCGTCAGAGTCTGGGTTTaGGAAAGCTCCACCATGGTCTTCACAGCCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: TCSCSRGVRVWV*ESSTMVFTARA Trigger: GGCCCTGGCTGTGAAGACCATGGTGGAGCTTTCCCAAACCCAGACTCTGACGCCTCGGGAGCAGCTGCATGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS CCA 72 bp | GGTAGAGCATGGAACAGCTGTCCACCACGTCCAGCATaGTACCACTGGCCTGCAGGCTGGGGAGTATGTGGC | + |
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Preference number: 6 (lower is better) Translates to: GRAWNSCPPRPA*YHWPAGWGVCG Trigger: GCCACATACTCCCCAGCCTGCAGGCCAGTGGTACCATGCTGGACGTGGTGGACAGCTGTTCCATGCTCTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS CAA 72 bp | CACATGCAGCTGCTCCCGAGGCGTCAGAGTCTGGGTTaGGGAAAGCTCCACCATGGTCTTCACAGCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: HMQLLPRRQSLG*GKLHHGLHSQG Trigger: GCCCTGGCTGTGAAGACCATGGTGGAGCTTTCCCAAACCCAGACTCTGACGCCTCGGGAGCAGCTGCATGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS CAA 90 bp | CACCGCAGACACATGCAGCTGCTCCCGAGGCGTCAGAGTCTGGGTTaGGGAAAGCTCCACCATGGTCTTCACAGCCAGGGCCAGGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: HRRHMQLLPRRQSLG*GKLHHGLHSQGQVF Trigger: AAAGACCTGGCCCTGGCTGTGAAGACCATGGTGGAGCTTTCCCAAACCCAGACTCTGACGCCTCGGGAGCAGCTGCATGTGTCTGCGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS TCA 72 bp | GCCCATGGCAAAGGTTGGATCCGCTGCCCTGAGCTTTaGCAGGCAGCCCTCGATGCCACCAAGACTCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: AHGKGWIRCPEL*QAALDATKTLV Trigger: GACAAGAGTCTTGGTGGCATCGAGGGCTGCCTGTCAAAGCTCAGGGCAGCGGATCCAACCTTTGCCATGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS TCA 72 bp | TGGAGGTCCCGTGCACCCAGTGAGGCCATCAGGAAGTaGGCATCGTTGAACAGGAGGATGTGGTCTCGGGTG | + |
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Preference number: 6 (lower is better) Translates to: WRSRAPSEAIRK*ASLNRRMWSRV Trigger: CACCCGAGACCACATCCTCCTGTTCAACGATGCTCACTTCCTGATGGCCTCACTGGGTGCACGGGACCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS GCA 72 bp | CCCTTGGCAAACATCTCCACCGCAGACACATGCAGCTaGTCCCGAGGCGTCAGAGTCTGGGTTTGGGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: PLANISTADTCS*SRGVRVWVWES Trigger: GCTTTCCCAAACCCAGACTCTGACGCCTCGGGAGCAGCTGCATGTGTCTGCGGTGGAGATGTTTGCCAAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS CCA 72 bp | GAGGCGTCAGAGTCTGGGTTTGGGAAAGCTCCACCATaGTCTTCACAGCCAGGGCCAGGTCTTTGTCCAGCG | + |
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Preference number: 6 (lower is better) Translates to: EASESGFGKAPP*SSQPGPGLCPA Trigger: CGCTGGACAAAGACCTGGCCCTGGCTGTGAAGACCATGGTGGAGCTTTCCCAAACCCAGACTCTGACGCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS TCA 72 bp | AGGTGCAGGTCATGGCCGCGTGAATCAGCAGCTGGTTaGAGACATCTCTCTGGGCGTTGCTGCCCCCAATCT | + |
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Preference number: 6 (lower is better) Translates to: RCRSWPRESAAG*RHLSGRCCPQS Trigger: AGATTGGGGGCAGCAACGCCCAGAGAGATGTCTTCAACCAGCTGCTGATTCACGCGGCCATGACCTGCACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS GCA 72 bp | AAGTTCCCCTTGGCAAACATCTCCACCGCAGACACATaGAGCTGCTCCCGAGGCGTCAGAGTCTGGGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: KFPLANISTADT*SCSRGVRVWVW Trigger: CCAAACCCAGACTCTGACGCCTCGGGAGCAGCTGCATGTGTCTGCGGTGGAGATGTTTGCCAAGGGGAACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS CCA 72 bp | TGGAACAGCTGTCCACCACGTCCAGCATGGTACCACTaGCCTGCAGGCTGGGGAGTATGTGGCTGTCATAGA | + |
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Preference number: 6 (lower is better) Translates to: WNSCPPRPAWYH*PAGWGVCGCHR Trigger: TCTATGACAGCCACATACTCCCCAGCCTGCAGGCCAGTGGTACCATGCTGGACGTGGTGGACAGCTGTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS CCA 72 bp | TCGTTGAACAGGAGGATGTGGTCTCGGGTGTGCTTCTaGGTCACAGGTAGAACAGTCTGCCACCGCTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: SLNRRMWSRVCF*VTGRTVCHRWP Trigger: TGGCCAGCGGTGGCAGACTGTTCTACCTGTGACCCAGAAGCACACCCGAGACCACATCCTCCTGTTCAACGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS TCA 72 bp | TCACGTAGCAAAGGTTGGATCCGCTGCCCTGAGCTTTaGCAGGCAGCCCTCGATGCCACCAAGACTCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: SRSKGWIRCPEL*QAALDATKTLV Trigger: GACAAGAGTCTTGGTGGCATCGAGGGCTGCCTGTCAAAGCTCAGGGCAGCGGATCCAACCTTTGCTACGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124011.2 |
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| CDS CCA 72 bp | GTTCCCAGAGATCACAGGCTCTGGGGAAGTTCCCCTTaGCAAACATCTCCACCGCAGACACATGCAGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: VPRDHRLWGSSP*QTSPPQTHAAA Trigger: AGCAGCTGCATGTGTCTGCGGTGGAGATGTTTGCCAAGGGGAACTTCCCCAGAGCCTGTGATCTCTGGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS CCA 72 bp | CCATCAGAAGGCTCCGGGCTACATTCTTGTGTACACTaGAGGTGCAGGTCATGGCCGCGTGAATCAGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: PSEGSGLHSCVH*RCRSWPRESAA Trigger: AGCTGCTGATTCACGCGGCCATGACCTGCACCTCCAGTGTACACAAGAATGTAGCCCGGAGCCTTCTGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS CAA 72 bp | TGTTCCCAGAGATCACAGGCTCTGGGGAAGTTCCCCTaGGCAAACATCTCCACCGCAGACACATGCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: CSQRSQALGKFP*ANISTADTCSC Trigger: GCAGCTGCATGTGTCTGCGGTGGAGATGTTTGCCAAGGGGAACTTCCCCAGAGCCTGTGATCTCTGGGAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS CCA 72 bp | AGGTGGCATCGAACAGCTTGCAGGCTTCATTGCTTGTaGTTGAGAGTGGGAGCCCAGCATTCTTCCACGCCT | + |
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Preference number: 6 (lower is better) Translates to: RWHRTACRLHCL*LRVGAQHSSTP Trigger: AGGCGTGGAAGAATGCTGGGCTCCCACTCTCAACCACAAGCAATGAAGCCTGCAAGCTGTTCGATGCCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124011.2 ENSMUST00000146088.8 |
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| CDS CAA 90 bp | CTCTCTGGGCGTTGCTGCCCCCAATCTGGACAATTCGGTATCGGATaGGCAAGAGGAGTTCTAAGACTCGGTCAGGGTTTCCGTTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: LSGRCCPQSGQFGIG*ARGVLRLGQGFRSQ Trigger: CTGAGAACGGAAACCCTGACCGAGTCTTAGAACTCCTCTTGCCAATCCGATACCGAATTGTCCAGATTGGGGGCAGCAACGCCCAGAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS GCA 72 bp | GAGTCAAGGTGGCATCGAACAGCTTGCAGGCTTCATTaGTTGTGGTTGAGAGTGGGAGCCCAGCATTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: ESRWHRTACRLH*LWLRVGAQHSS Trigger: GGAAGAATGCTGGGCTCCCACTCTCAACCACAAGCAATGAAGCCTGCAAGCTGTTCGATGCCACCTTGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124011.2 ENSMUST00000146088.8 |
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| CDS CCA 72 bp | AGCCCGTCTTTGATCTCGGCTCTCATTTCATGTACGTaGGCCACAGTGTGCACTGACCATGCATCTGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: SPSLISALISCT*ATVCTDHASVG Trigger: GCCAACAGATGCATGGTCAGTGCACACTGTGGCCCACGTACATGAAATGAGAGCCGAGATCAAAGACGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS CCA 72 bp | TGGCCTGCAGGCTGGGGAGTATGTGGCTGTCATAGATaGTTAGTGCGGCCTCATAGTCTCCCTTTTCAATCA | + |
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Preference number: 6 (lower is better) Translates to: WPAGWGVCGCHR*LVRPHSLPFQS Trigger: TGATTGAAAAGGGAGACTATGAGGCCGCACTAACCATCTATGACAGCCACATACTCCCCAGCCTGCAGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS CAA 72 bp | CGTTGCTGCCCCCAATCTGGACAATTCGGTATCGGATaGGCAAGAGGAGTTCTAAGACTCGGTCAGGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: RCCPQSGQFGIG*ARGVLRLGQGF Trigger: GAAACCCTGACCGAGTCTTAGAACTCCTCTTGCCAATCCGATACCGAATTGTCCAGATTGGGGGCAGCAACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS GCA 72 bp | ATCTCGGCTCTCATTTCATGTACGTGGGCCACAGTGTaGACTGACCATGCATCTGTTGGCTCAATAGATAAA | + |
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Preference number: 6 (lower is better) Translates to: ISALISCTWATV*TDHASVGSIDK Trigger: TTTATCTATTGAGCCAACAGATGCATGGTCAGTGCACACTGTGGCCCACGTACATGAAATGAGAGCCGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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| CDS CCA 72 bp | CCTCTTTGGCAAGCTTTTGTGCCTGGTCATAGAAGTTaGTTTCCATCAGTCCGAAAGAATAGATGCCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: PLWQAFVPGHRS*FPSVRKNRCLS Trigger: TGAAAGGCATCTATTCTTTCGGACTGATGGAAACCAACTTCTATGACCAGGCACAAAAGCTTGCCAAAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146088.8 |
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