RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTC37 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000033991

Ensembl transcript IDs: ENSMUST00000091466.4, ENSMUST00000224386.2, ENSMUST00000224790.2, ENSMUST00000225147.2, ENSMUST00000225220.2

Found 310 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGCAGCAGCCCCACCAGGAGGAGAAGACAGAAGGACGTGGGCACTaGGCTGCACAGCCATTCTCCAGTATACACATAGCTGCCTGGGGG +
Preference number: 1 (lower is better)
Translates to: WQQPHQEEKTEGRGH*AAQPFSSIHIAAWG
Trigger: CCCCCAGGCAGCTATGTGTATACTGGAGAATGGCTGTGCAGCTCAGTGCCCACGTCCTTCTGTCTTCTCCTCCTGGTGGGGCTGCTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
3UTR GCA 90 bp GCAGCCCCACCAGGAGGAGAAGACAGAAGGACGTGGGCACTGAGCTaGACAGCCATTCTCCAGTATACACATAGCTGCCTGGGGGTCAGG +
Preference number: 1 (lower is better)
Translates to: AAPPGGEDRRTWALS*TAILQYTHSCLGVR
Trigger: CCTGACCCCCAGGCAGCTATGTGTATACTGGAGAATGGCTGTGCAGCTCAGTGCCCACGTCCTTCTGTCTTCTCCTCCTGGTGGGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
3UTR GCA 90 bp AGCCACCTCTGCTTAAGTACGCCTCTCCTAAGGACTCCCAGCAATTaGAGTCCTTTGGGTCTGCCCTTAATGCTGCCTGTAAGTCAGCCA +
Preference number: 1 (lower is better)
Translates to: SHLCLSTPLLRTPSN*SPLGLPLMLPVSQP
Trigger: TGGCTGACTTACAGGCAGCATTAAGGGCAGACCCAAAGGACTGCAATTGCTGGGAGTCCTTAGGAGAGGCGTACTTAAGCAGAGGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225220.2
3UTR GCA 90 bp ATCAGCTGGTACTGTGCAATGGCCTCTGAGTACCTGCCTAGGATTTaGTGTATCGCCGCCACCTTAAACACACTGTATGTGGAGTCTGGG +
Preference number: 1 (lower is better)
Translates to: ISWYCAMASEYLPRI*CIAATLNTLYVESG
Trigger: CCCAGACTCCACATACAGTGTGTTTAAGGTGGCGGCGATACAGCAAATCCTAGGCAGGTACTCAGAGGCCATTGCACAGTACCAGCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225220.2
3UTR CCA 90 bp TTATTCTTTTCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTaGAACCCCATGCGGATCATGATGGCCTGGAACTCACAGAGATCC +
Preference number: 1 (lower is better)
Translates to: LFFSRWDFIVSRWLA*NPMRIMMAWNSQRS
Trigger: GGATCTCTGTGAGTTCCAGGCCATCATGATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGAAAAGAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000225147.2
3UTR CCA 90 bp GATTTGCTGTATCGCCGCCACCTTAAACACACTGTATGTGGAGTCTaGGTTGAGCTCACTGGCTTTCATAAACGACTTCAAGGCTGTTGT +
Preference number: 1 (lower is better)
Translates to: DLLYRRHLKHTVCGV*VELTGFHKRLQGCC
Trigger: ACAACAGCCTTGAAGTCGTTTATGAAAGCCAGTGAGCTCAACCCAGACTCCACATACAGTGTGTTTAAGGTGGCGGCGATACAGCAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225220.2
3UTR GCA 90 bp CAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTATTAAAGGCGTaGACCACCATGCCCACTGGGATATTTAAAAATCACAATCCAAAG +
Preference number: 1 (lower is better)
Translates to: QRFACLCSYVLVLKA*TTMPTGIFKNHNPK
Trigger: CTTTGGATTGTGATTTTTAAATATCCCAGTGGGCATGGTGGTGCACGCCTTTAATACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
3UTR GCA 90 bp GTCACAATCTTACAAGCATTCATATTCTGCTTCTTCAATAGGATCTaGGATGGAACTAGTAAGACAGAGTACAAGAAATGTAGATTTCAC +
Preference number: 1 (lower is better)
Translates to: VTILQAFIFCFFNRI*DGTSKTEYKKCRFH
Trigger: GTGAAATCTACATTTCTTGTACTCTGTCTTACTAGTTCCATCGCAGATCCTATTGAAGAAGCAGAATATGAATGCTTGTAAGATTGTGAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
3UTR-3UTR CCA 90 bp TCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCGTGCCAGGGCTAAACTaGTGCACCACCACACCTAGC +
Preference number: 2 (lower is better)
Translates to: SRWDFIVSRWLAWNPMRIVPGLN*CTTTPS
Trigger: GCTAGGTGTGGTGGTGCACCAGTTTAGCCCTGGCAC...GATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000225147.2
3UTR-3UTR GCA 90 bp GCCGCCACCTTAAACACACTGTATGTGGAGTCTGGGTTGAGCTCACTGGCTTTCAGGACTCCCAGCAATTaGAGTCCTTTGGGTCTGCCC +
Preference number: 2 (lower is better)
Translates to: AATLNTLYVESGLSSLAFRTPSN*SPLGLP
Trigger: GGGCAGACCCAAAGGACTGCAATTGCTGGGAGTCCT...GAAAGCCAGTGAGCTCAACCCAGACTCCACATACAGTGTGTTTAAGGTGGCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225220.2
3UTR CAA 90 bp TGCTTAAGTACGCCTCTCCTAAGGACTCCCAGCAATTGCAGTCCTTaGGGTCTGCCCTTAATGCTGCCTGTAAGTCAGCCACTGCTTGAG +
Preference number: 2 (lower is better)
Translates to: CLSTPLLRTPSNCSP*GLPLMLPVSQPLLE
Trigger: CTCAAGCAGTGGCTGACTTACAGGCAGCATTAAGGGCAGACCCAAAGGACTGCAATTGCTGGGAGTCCTTAGGAGAGGCGTACTTAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225220.2
3UTR-3UTR GCA 90 bp AAGAACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCAATTCAGAGATTTGCATaGCTCTGCTCCTACGTGCTG +
Preference number: 2 (lower is better)
Translates to: KNLCGQVCASVRPPQALSIQRFA*LCSYVL
Trigger: CAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAAT...TGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
3UTR-3UTR CCA 90 bp AGAATTAGCAAAAGAATCCAAAGGTCATTGCTTGAATTTGGGCTGGAGCAAGGGTCTAATGCAGGCAGATaGCAGCAGCCCCACCAGGAG +
Preference number: 2 (lower is better)
Translates to: RISKRIQRSLLEFGLEQGSNAGR*QQPHQE
Trigger: CTCCTGGTGGGGCTGCTGCCATCTGCCTGCATTAGA...CCCTTGCTCCAGCCCAAATTCAAGCAATGACCTTTGGATTCTTTTGCTAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
3UTR-3UTR GCA 90 bp AAGAACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCAAGATTTGCATGCCTCTaGTCCTACGTGCTGGTATTA +
Preference number: 2 (lower is better)
Translates to: KNLCGQVCASVRPPQALSRFACL*SYVLVL
Trigger: TAATACCAGCACGTAGGAGCAGAGGCATGCAAATCT...TGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
3UTR CAA 90 bp CTCAGGGCCCTGGAAGTCAGAATTAGCAAAAGAATCCAAAGGTCATaGCTTGAATTTGGGCTGGAGCAAGGGCTAACCACACTTCAGTAT +
Preference number: 2 (lower is better)
Translates to: LRALEVRISKRIQRS*LEFGLEQGLTTLQY
Trigger: ATACTGAAGTGTGGTTAGCCCTTGCTCCAGCCCAAATTCAAGCAATGACCTTTGGATTCTTTTGCTAATTCTGACTTCCAGGGCCCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
3UTR-3UTR TCA 90 bp ACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCAGAATCACCAACACTTGGTCTaGAGAATTTTAAGTCTCACA +
Preference number: 2 (lower is better)
Translates to: TFVVRSVQALDLLRLYQNHQHLV*RILSLT
Trigger: TGTGAGACTTAAAATTCTTCAGACCAAGTGTTGGTG...ATTCTGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
3UTR-3UTR GCA 90 bp AAGAACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCACAAGCATTCATATTCTaGTTCTTCAATAGGATCTGC +
Preference number: 2 (lower is better)
Translates to: KNLCGQVCASVRPPQALSQAFIF*FFNRIC
Trigger: GCAGATCCTATTGAAGAAGCAGAATATGAATGCTTG...TGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
3UTR-3UTR CCA 90 bp AGAATTAGCAAAAGAATCCAAAGGTCATTGCTTGAATTTGGGCTGGAGCAAGGGTCTCACGACCAATTCTaGCTGGCCTGGAACTTTCTA +
Preference number: 2 (lower is better)
Translates to: RISKRIQRSLLEFGLEQGSHDQF*LAWNFL
Trigger: TAGAAAGTTCCAGGCCAGCCAGAATTGGTCGTGAGA...CCCTTGCTCCAGCCCAAATTCAAGCAATGACCTTTGGATTCTTTTGCTAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
3UTR-3UTR CCA 90 bp AGAATTAGCAAAAGAATCCAAAGGTCATTGCTTGAATTTGGGCTGGAGCAAGGGCAATTCTGGCTGGCCTaGAACTTTCTACATAGACCA +
Preference number: 2 (lower is better)
Translates to: RISKRIQRSLLEFGLEQGQFWLA*NFLHRP
Trigger: TGGTCTATGTAGAAAGTTCCAGGCCAGCCAGAATTG...CCCTTGCTCCAGCCCAAATTCAAGCAATGACCTTTGGATTCTTTTGCTAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
3UTR-3UTR TCA 90 bp AGAATTAGCAAAAGAATCCAAAGGTCATTGCTTGAATTTGGGCTGGAGCAAGGGCCTAAGGCTTCTGATTaGATAACTGTCAGTGATTAT +
Preference number: 2 (lower is better)
Translates to: RISKRIQRSLLEFGLEQGPKASD*ITVSDY
Trigger: ATAATCACTGACAGTTATTCAATCAGAAGCCTTAGG...CCCTTGCTCCAGCCCAAATTCAAGCAATGACCTTTGGATTCTTTTGCTAATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
3UTR TCA 72 bp CCCCACCAGGAGGAGAAGACAGAAGGACGTGGGCACTaGGCTGCACAGCCATTCTCCAGTATACACATAGCT +
Preference number: 3 (lower is better)
Translates to: PHQEEKTEGRGH*AAQPFSSIHIA
Trigger: AGCTATGTGTATACTGGAGAATGGCTGTGCAGCTCAGTGCCCACGTCCTTCTGTCTTCTCCTCCTGGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
3UTR GCA 72 bp CCAGGAGGAGAAGACAGAAGGACGTGGGCACTGAGCTaGACAGCCATTCTCCAGTATACACATAGCTGCCTG +
Preference number: 3 (lower is better)
Translates to: PGGEDRRTWALS*TAILQYTHSCL
Trigger: CAGGCAGCTATGTGTATACTGGAGAATGGCTGTGCAGCTCAGTGCCCACGTCCTTCTGTCTTCTCCTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
3UTR-3UTR CAA 90 bp GCCGCCACCTTAAACACACTGTATGTGGAGTCTGGGTTGAGCTCACTGGCTTTCAAGGACTCCCAGCAATaGCAGTCCTTTGGGTCTGCC +
Preference number: 3 (lower is better)
Translates to: AATLNTLYVESGLSSLAFKDSQQ*QSFGSA
Trigger: GGCAGACCCAAAGGACTGCAATTGCTGGGAGTCCTT...GAAAGCCAGTGAGCTCAACCCAGACTCCACATACAGTGTGTTTAAGGTGGCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225220.2
3UTR GCA 72 bp CTGAGCTGCACAGCCATTCTCCAGTATACACATAGCTaGCTGGGGGTCAGGCTGTACACACTGGATCAGCTT +
Preference number: 3 (lower is better)
Translates to: LSCTAILQYTHS*LGVRLYTLDQL
Trigger: AAGCTGATCCAGTGTGTACAGCCTGACCCCCAGGCAGCTATGTGTATACTGGAGAATGGCTGTGCAGCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
3UTR CCA 72 bp TCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTaGAACCCCATGCGGATCATGATGGCCTGGAACTCA +
Preference number: 3 (lower is better)
Translates to: SRWDFIVSRWLA*NPMRIMMAWNS
Trigger: TGAGTTCCAGGCCATCATGATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000225147.2
3UTR CCA 72 bp GCTGCACAGCCATTCTCCAGTATACACATAGCTGCCTaGGGGTCAGGCTGTACACACTGGATCAGCTTACTA +
Preference number: 3 (lower is better)
Translates to: AAQPFSSIHIAA*GSGCTHWISLL
Trigger: TAGTAAGCTGATCCAGTGTGTACAGCCTGACCCCCAGGCAGCTATGTGTATACTGGAGAATGGCTGTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
3UTR GCA 72 bp TGCTTAAGTACGCCTCTCCTAAGGACTCCCAGCAATTaGAGTCCTTTGGGTCTGCCCTTAATGCTGCCTGTA +
Preference number: 3 (lower is better)
Translates to: CLSTPLLRTPSN*SPLGLPLMLPV
Trigger: TACAGGCAGCATTAAGGGCAGACCCAAAGGACTGCAATTGCTGGGAGTCCTTAGGAGAGGCGTACTTAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225220.2
3UTR CCA 72 bp TTATTCTTTTCAAGATGGGATTTCATTGTGTCCAGATaGCTGGCCTGGAACCCCATGCGGATCATGATGGCC +
Preference number: 3 (lower is better)
Translates to: LFFSRWDFIVSR*LAWNPMRIMMA
Trigger: GGCCATCATGATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGAAAAGAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000225147.2
3UTR CCA 72 bp TATCGCCGCCACCTTAAACACACTGTATGTGGAGTCTaGGTTGAGCTCACTGGCTTTCATAAACGACTTCAA +
Preference number: 3 (lower is better)
Translates to: YRRHLKHTVCGV*VELTGFHKRLQ
Trigger: TTGAAGTCGTTTATGAAAGCCAGTGAGCTCAACCCAGACTCCACATACAGTGTGTTTAAGGTGGCGGCGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225220.2
3UTR-3UTR CAA 90 bp GAAAACTCAGGGCCCTGGAAGTCAGAATTAGCAAAAGAATCCAAAGGTCATTGCCTCAAATTCAGAGATTaGCATGCCTCTGCTCCTACG +
Preference number: 3 (lower is better)
Translates to: ENSGPWKSELAKESKGHCLKFRD*HASAPT
Trigger: CGTAGGAGCAGAGGCATGCAAATCTCTGAATTTGAG...GCAATGACCTTTGGATTCTTTTGCTAATTCTGACTTCCAGGGCCCTGAGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
3UTR GCA 72 bp CCATTAGCAGTCACAATCTTACAAGCATTCATATTCTaGTTCTTCAATAGGATCTGCGATGGAACTAGTAAG +
Preference number: 3 (lower is better)
Translates to: PLAVTILQAFIF*FFNRICDGTSK
Trigger: CTTACTAGTTCCATCGCAGATCCTATTGAAGAAGCAGAATATGAATGCTTGTAAGATTGTGACTGCTAATGG
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
3UTR GCA 72 bp TTACAAGCATTCATATTCTGCTTCTTCAATAGGATCTaGGATGGAACTAGTAAGACAGAGTACAAGAAATGT +
Preference number: 3 (lower is better)
Translates to: LQAFIFCFFNRI*DGTSKTEYKKC
Trigger: ACATTTCTTGTACTCTGTCTTACTAGTTCCATCGCAGATCCTATTGAAGAAGCAGAATATGAATGCTTGTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
3UTR TCA 72 bp TATAACTTTAAAATACGCTGTTCTGGTGAGAACTCTTaGTTCATTGCCTCATCTGTAAGTATTTTCATCGGT +
Preference number: 3 (lower is better)
Translates to: YNFKIRCSGENS*FIASSVSIFIG
Trigger: ACCGATGAAAATACTTACAGATGAGGCAATGAATCAAGAGTTCTCACCAGAACAGCGTATTTTAAAGTTATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000225147.2
CDS-3UTR TCA 90 bp AGATGGCTGGCCTGGAACCCCATGCGGATCATGATGGCCTGGAACTCACAGAGATGGGCTTCGGCTAGATaGCACCACCCAGCTATGCAG +
Preference number: 4 (lower is better)
Translates to: RWLAWNPMRIMMAWNSQRWASAR*HHPAMQ
Trigger: CTGCATAGCTGGGTGGTGTCATCTAGCCGAAGCCCA...TCTCTGTGAGTTCCAGGCCATCATGATCCGCATGGGGTTCCAGGCCAGCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CCA 90 bp AGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCATGAGACAGGCGAGGCCTTaGAGAACCAGCAGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RWDFIVSRWLAWNPMRIMRQARP*RTSSPG
Trigger: CCCAGGACTGCTGGTTCTCCAAGGCCTCGCCTGTCT...CATGATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CCA 90 bp TTCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATAGTGTAGTTGCCCTCTaGTACGCCTCGGCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: FKMGFHCVQMAGLEPHADSVVAL*YASAAS
Trigger: GGAAGCCGCCGAGGCGTACCAGAGGGCAACTACACT...ATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR TCA 90 bp AGATGGCTGGCCTGGAACCCCATGCGGATCATGATGGCCTGGAACTCACAGAGAATTCAGTGCTGCTTTTaGCAGTGTGGCATCGCGCAT +
Preference number: 4 (lower is better)
Translates to: RWLAWNPMRIMMAWNSQRIQCCF*QCGIAH
Trigger: ATGCGCGATGCCACACTGTCAAAAGCAGCACTGAAT...TCTCTGTGAGTTCCAGGCCATCATGATCCGCATGGGGTTCCAGGCCAGCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR GCA 90 bp TCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCAAACTTGCTAGCCCCTaGCAGGCGAGCAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: SRWDFIVSRWLAWNPMRIKLASP*QASSCS
Trigger: AGAACAGCTGCTCGCCTGGCAGGGGCTAGCAAGTTT...GATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR GCA 90 bp CAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCAAGGACTCCCAGCAATTaGAGTCCTTTGGGTCTGCCC +
Preference number: 4 (lower is better)
Translates to: QDGISLCPDGWPGTPCGSRTPSN*SPLGLP
Trigger: GGGCAGACCCAAAGGACTGCAATTGCTGGGAGTCCT...TGATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
3UTR CAA 72 bp ACGCCTCTCCTAAGGACTCCCAGCAATTGCAGTCCTTaGGGTCTGCCCTTAATGCTGCCTGTAAGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: TPLLRTPSNCSP*GLPLMLPVSQP
Trigger: TGGCTGACTTACAGGCAGCATTAAGGGCAGACCCAAAGGACTGCAATTGCTGGGAGTCCTTAGGAGAGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225220.2
CDS-3UTR GCA 90 bp TCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCCACTTGTCTTTGTACTaGCACACTGTGGCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SRWDFIVSRWLAWNPMRIHLSLY*HTVALQ
Trigger: CTGCAGGGCCACAGTGTGGCAGTACAAAGACAAGTG...GATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR GCA 90 bp AGATGGCTGGCCTGGAACCCCATGCGGATCATGATGGCCTGGAACTCACAGAGATATCTTCTGCTGTACTaGTTCCCATGGCCAACTGGT +
Preference number: 4 (lower is better)
Translates to: RWLAWNPMRIMMAWNSQRYLLLY*FPWPTG
Trigger: ACCAGTTGGCCATGGGAAGCAGTACAGCAGAAGATA...TCTCTGTGAGTTCCAGGCCATCATGATCCGCATGGGGTTCCAGGCCAGCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CCA 90 bp TCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCGCTGGTACTGTGCAATaGCCTCTGAGTACCTGCCTA +
Preference number: 4 (lower is better)
Translates to: SRWDFIVSRWLAWNPMRIAGTVQ*PLSTCL
Trigger: TAGGCAGGTACTCAGAGGCCATTGCACAGTACCAGC...GATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
3UTR CAA 72 bp CTGCTTAAGTACGCCTCTCCTAAGGACTCCCAGCAATaGCAGTCCTTTGGGTCTGCCCTTAATGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: LLKYASPKDSQQ*QSFGSALNAAC
Trigger: ACAGGCAGCATTAAGGGCAGACCCAAAGGACTGCAATTGCTGGGAGTCCTTAGGAGAGGCGTACTTAAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225220.2
CDS-3UTR TCA 90 bp TCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCTGCCGGGACAGAGGTTaGGTTGGACATGACTGTTTT +
Preference number: 4 (lower is better)
Translates to: SRWDFIVSRWLAWNPMRICRDRG*VGHDCF
Trigger: AAAACAGTCATGTCCAACTCAACCTCTGTCCCGGCA...GATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR GCA 90 bp AAGAACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCAAGGACTCCCAGCAATTaGAGTCCTTTGGGTCTGCCC +
Preference number: 4 (lower is better)
Translates to: KNLCGQVCASVRPPQALSRTPSN*SPLGLP
Trigger: GGGCAGACCCAAAGGACTGCAATTGCTGGGAGTCCT...TGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR GCA 90 bp CAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCATACCTGCCTAGGATTTaGTGTATCGCCGCCACCTTA +
Preference number: 4 (lower is better)
Translates to: QDGISLCPDGWPGTPCGSYLPRI*CIAATL
Trigger: TAAGGTGGCGGCGATACAGCAAATCCTAGGCAGGTA...TGATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR GCA 90 bp CAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCATGGCCTCTGAGTACCTaGCTAGGATTTGCTGTATCG +
Preference number: 4 (lower is better)
Translates to: QDGISLCPDGWPGTPCGSWPLST*LGFAVS
Trigger: CGATACAGCAAATCCTAGGCAGGTACTCAGAGGCCA...TGATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR GCA 90 bp TCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCAGCCAGTTTATCATCTaGATGGCAGGCTGCCATCAG +
Preference number: 4 (lower is better)
Translates to: SRWDFIVSRWLAWNPMRISQFII*MAGCHQ
Trigger: CTGATGGCAGCCTGCCATGCAGATGATAAACTGGCT...GATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CCA 90 bp AGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCATGAGTTTATCATCTGCATaGCAGGCTGCCATCAGCCCA +
Preference number: 4 (lower is better)
Translates to: RWDFIVSRWLAWNPMRIMSLSSA*QAAISP
Trigger: TGGGCTGATGGCAGCCTGCCATGCAGATGATAAACT...CATGATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR TCA 90 bp AGATGGCTGGCCTGGAACCCCATGCGGATCATGATGGCCTGGAACTCACAGAGAAAGCCTTCTGTTAGATaGCGAACAGCATCTTCATAC +
Preference number: 4 (lower is better)
Translates to: RWLAWNPMRIMMAWNSQRKPSVR*RTASSY
Trigger: GTATGAAGATGCTGTTCGTCATCTAACAGAAGGCTT...TCTCTGTGAGTTCCAGGCCATCATGATCCGCATGGGGTTCCAGGCCAGCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR TCA 90 bp TCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCCCAGCACTTGCCTTCTaGGTTACTGCTGTCAAGATA +
Preference number: 4 (lower is better)
Translates to: SRWDFIVSRWLAWNPMRIPALAF*VTAVKI
Trigger: TATCTTGACAGCAGTAACTCAGAAGGCAAGTGCTGG...GATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR TCA 90 bp GCCTCTGAGTACCTGCCTAGGATTTGCTGTATCGCCGCCACCTTAAACACACTGCCAGCACTTGCCTTCTaGGTTACTGCTGTCAAGATA +
Preference number: 4 (lower is better)
Translates to: ASEYLPRICCIAATLNTLPALAF*VTAVKI
Trigger: TATCTTGACAGCAGTAACTCAGAAGGCAAGTGCTGG...CAGTGTGTTTAAGGTGGCGGCGATACAGCAAATCCTAGGCAGGTACTCAGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225220.2
CDS-3UTR TCA 90 bp TCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCCAGTGCATAAATTGCTaGCATCAGAAGGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: SRWDFIVSRWLAWNPMRIQCINC*HQKAAV
Trigger: CACAGCTGCCTTCTGATGTCAGCAATTTATGCACTG...GATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR TCA 90 bp AGATGGCTGGCCTGGAACCCCATGCGGATCATGATGGCCTGGAACTCACAGAGAACCAGTGACAACTTGTaGGAAAGACCACTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: RWLAWNPMRIMMAWNSQRTSDNL*ERPLFK
Trigger: CTTGAAAAGTGGTCTTTCTCACAAGTTGTCACTGGT...TCTCTGTGAGTTCCAGGCCATCATGATCCGCATGGGGTTCCAGGCCAGCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR GCA 90 bp AATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTATTAAAGGCGTGCACAAACTTGCTAGCCCCTaGCAGGCGAGCAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: NSEICMPLLLRAGIKGVHKLASP*QASSCS
Trigger: AGAACAGCTGCTCGCCTGGCAGGGGCTAGCAAGTTT...GTGCACGCCTTTAATACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR GCA 90 bp AGATGGCTGGCCTGGAACCCCATGCGGATCATGATGGCCTGGAACTCACAGAGATCATTTCCACTAGCTTaGAACAATACTGGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: RWLAWNPMRIMMAWNSQRSFPLA*NNTGVP
Trigger: AGGGACACCAGTATTGTTGCAAGCTAGTGGAAATGA...TCTCTGTGAGTTCCAGGCCATCATGATCCGCATGGGGTTCCAGGCCAGCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR GCA 90 bp AAGAACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCACCGCCGTGTCTCTCTTaGTCCCATCTTACGGTTGAA +
Preference number: 4 (lower is better)
Translates to: KNLCGQVCASVRPPQALSPPCLS*SHLTVE
Trigger: TTCAACCGTAAGATGGGAGCAAGAGAGACACGGCGG...TGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CCA 90 bp GAAAACTCAGGGCCCTGGAAGTCAGAATTAGCAAAAGAATCCAAAGGTCATTGCAGACAGGCGAGGCCTTaGAGAACCAGCAGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: ENSGPWKSELAKESKGHCRQARP*RTSSPG
Trigger: CCCAGGACTGCTGGTTCTCCAAGGCCTCGCCTGTCT...GCAATGACCTTTGGATTCTTTTGCTAATTCTGACTTCCAGGGCCCTGAGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CCA 90 bp GAAAACTCAGGGCCCTGGAAGTCAGAATTAGCAAAAGAATCCAAAGGTCATTGCAGTGTAGTTGCCCTCTaGTACGCCTCGGCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: ENSGPWKSELAKESKGHCSVVAL*YASAAS
Trigger: GGAAGCCGCCGAGGCGTACCAGAGGGCAACTACACT...GCAATGACCTTTGGATTCTTTTGCTAATTCTGACTTCCAGGGCCCTGAGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CCA 90 bp AAGAACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCACTGCTTTTGACAGTGTaGCATCGCGCATTGCCAACC +
Preference number: 4 (lower is better)
Translates to: KNLCGQVCASVRPPQALSLLLTV*HRALPT
Trigger: GGTTGGCAATGCGCGATGCCACACTGTCAAAAGCAG...TGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR TCA 90 bp TTCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATTTCTCAGCCAGCAACTaGCTCAATTTTCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: FKMGFHCVQMAGLEPHADFSASN*LNFLHS
Trigger: GCTGTGGAGAAAATTGAGTCAGTTGCTGGCTGAGAA...ATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR TCA 90 bp AGATGGCTGGCCTGGAACCCCATGCGGATCATGATGGCCTGGAACTCACAGAGAGCATTTGAAGAGAAATaGCTTGGCTGCATCCATTTT +
Preference number: 4 (lower is better)
Translates to: RWLAWNPMRIMMAWNSQRAFEEK*LGCIHF
Trigger: AAAATGGATGCAGCCAAGTCATTTCTCTTCAAATGC...TCTCTGTGAGTTCCAGGCCATCATGATCCGCATGGGGTTCCAGGCCAGCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR TCA 90 bp AAGAACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCAATTCAGTGCTGCTTTTaGCAGTGTGGCATCGCGCAT +
Preference number: 4 (lower is better)
Translates to: KNLCGQVCASVRPPQALSIQCCF*QCGIAH
Trigger: ATGCGCGATGCCACACTGTCAAAAGCAGCACTGAAT...TGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR TCA 90 bp AAGAACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCAATCATTCCTTGGGACTaGTACACCTGTGCCAACCAC +
Preference number: 4 (lower is better)
Translates to: KNLCGQVCASVRPPQALSIIPWD*YTCANH
Trigger: GTGGTTGGCACAGGTGTATCAGTCCCAAGGAATGAT...TGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR GCA 90 bp AGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCATGGTCTTTATCAATCTATaGCATGTCCGAGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: RWDFIVSRWLAWNPMRIMVFINL*HVRATS
Trigger: AGAGGTGGCTCGGACATGGCATAGATTGATAAAGAC...CATGATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR GCA 90 bp CAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCACTGAGCCATTTTGAATaGTTCATGGGCTTGCTCGAT +
Preference number: 4 (lower is better)
Translates to: QDGISLCPDGWPGTPCGSLSHFE*FMGLLD
Trigger: ATCGAGCAAGCCCATGAAGCATTCAAAATGGCTCAG...TGATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR GCA 90 bp AAGAACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCAGTTGCCCTGTTGGGATaGCACTTGGAGACTCTTTCT +
Preference number: 4 (lower is better)
Translates to: KNLCGQVCASVRPPQALSVALLG*HLETLS
Trigger: AGAAAGAGTCTCCAAGTGGCATCCCAACAGGGCAAC...TGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CCA 90 bp CAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCATTCTCAAGTGCTCTTTaGAAACTCACTTCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: QDGISLCPDGWPGTPCGSFSSAL*KLTSAC
Trigger: GCAGGCAGAAGTGAGTTTCCAAAGAGCACTTGAGAA...TGATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CCA 90 bp AATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTATTAAAGGCGTGCACGCTGGTACTGTGCAATaGCCTCTGAGTACCTGCCTA +
Preference number: 4 (lower is better)
Translates to: NSEICMPLLLRAGIKGVHAGTVQ*PLSTCL
Trigger: TAGGCAGGTACTCAGAGGCCATTGCACAGTACCAGC...GTGCACGCCTTTAATACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CCA 90 bp AATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTATTAAAGGCGTGCACGACAGCAGGGTCATCTaGAGAAAGGAAGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: NSEICMPLLLRAGIKGVHDSRVI*RKEGCL
Trigger: AAGGCAGCCTTCCTTTCTCCAGATGACCCTGCTGTC...GTGCACGCCTTTAATACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR TCA 90 bp AGAATTAGCAAAAGAATCCAAAGGTCATTGCTTGAATTTGGGCTGGAGCAAGGGTGGGCTTCGGCTAGATaGCACCACCCAGCTATGCAG +
Preference number: 4 (lower is better)
Translates to: RISKRIQRSLLEFGLEQGWASAR*HHPAMQ
Trigger: CTGCATAGCTGGGTGGTGTCATCTAGCCGAAGCCCA...CCCTTGCTCCAGCCCAAATTCAAGCAATGACCTTTGGATTCTTTTGCTAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR TCA 90 bp ACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCAGAATCCAGCACTTGCCTTCTaGGTTACTGCTGTCAAGATA +
Preference number: 4 (lower is better)
Translates to: TFVVRSVQALDLLRLYQNPALAF*VTAVKI
Trigger: TATCTTGACAGCAGTAACTCAGAAGGCAAGTGCTGG...ATTCTGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR TCA 90 bp AAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCATAGGGCTCCTAAGACATaGACATGCACTTTAGATGGA +
Preference number: 4 (lower is better)
Translates to: KMGFHCVQMAGLEPHADHRAPKT*TCTLDG
Trigger: TCCATCTAAAGTGCATGTTCATGTCTTAGGAGCCCT...ATGATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR TCA 90 bp ACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCAGAATCAGTGCATAAATTGCTaGCATCAGAAGGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: TFVVRSVQALDLLRLYQNQCINC*HQKAAV
Trigger: CACAGCTGCCTTCTGATGTCAGCAATTTATGCACTG...ATTCTGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR TCA 90 bp AAGAACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCATTCTTTGTCCTTAAGTaGAGCAGCAACAGCAGACCG +
Preference number: 4 (lower is better)
Translates to: KNLCGQVCASVRPPQALSFFVLK*SSNSRP
Trigger: CGGTCTGCTGTTGCTGCTTCACTTAAGGACAAAGAA...TGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR TCA 90 bp TCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCAGGAGTGACATACACTaGACTTGTCTCAACAGTAAG +
Preference number: 4 (lower is better)
Translates to: SRWDFIVSRWLAWNPMRIRSDIH*TCLNSK
Trigger: CTTACTGTTGAGACAAGTTCAGTGTATGTCACTCCT...GATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR TCA 90 bp AATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTATTAAAGGCGTGCACTGCCGGGACAGAGGTTaGGTTGGACATGACTGTTTT +
Preference number: 4 (lower is better)
Translates to: NSEICMPLLLRAGIKGVHCRDRG*VGHDCF
Trigger: AAAACAGTCATGTCCAACTCAACCTCTGTCCCGGCA...GTGCACGCCTTTAATACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR TCA 90 bp TTCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATTCACCAACACATCAATaGGTTCAGGGTCATCTTTCG +
Preference number: 4 (lower is better)
Translates to: FKMGFHCVQMAGLEPHADSPTHQ*VQGHLS
Trigger: CGAAAGATGACCCTGAACTCATTGATGTGTTGGTGA...ATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000225147.2
CDS-3UTR GCA 90 bp ACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCAGAATAACTTTACCCATGTGTaGATCCAGTCTCGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: TFVVRSVQALDLLRLYQNNFTHV*IQSRSL
Trigger: AAGGCTGCGAGACTGGATGCACACATGGGTAAAGTT...ATTCTGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR GCA 90 bp AAGAACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCATATCTTCTGCTGTACTaGTTCCCATGGCCAACTGGT +
Preference number: 4 (lower is better)
Translates to: KNLCGQVCASVRPPQALSYLLLY*FPWPTG
Trigger: ACCAGTTGGCCATGGGAAGCAGTACAGCAGAAGATA...TGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR GCA 90 bp CAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCAATTGCTTTTATCTTCTaGTGTACTGCTTCCCATGGC +
Preference number: 4 (lower is better)
Translates to: QDGISLCPDGWPGTPCGSIAFIF*CTASHG
Trigger: GCCATGGGAAGCAGTACAGCAGAAGATAAAAGCAAT...TGATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR GCA 90 bp AATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTATTAAAGGCGTGCACAGCCAGTTTATCATCTaGATGGCAGGCTGCCATCAG +
Preference number: 4 (lower is better)
Translates to: NSEICMPLLLRAGIKGVHSQFII*MAGCHQ
Trigger: CTGATGGCAGCCTGCCATGCAGATGATAAACTGGCT...GTGCACGCCTTTAATACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CCA 90 bp AGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCATGGCAGCCTTTAGAAAGTaGGTAAGAGCCTTTGTTTTG +
Preference number: 4 (lower is better)
Translates to: RWDFIVSRWLAWNPMRIMAAFRK*VRAFVL
Trigger: CAAAACAAAGGCTCTTACCCACTTTCTAAAGGCTGC...CATGATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CCA 90 bp TCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCTCAAGGATGTTGTACTaGTACAGCTCTGTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: SRWDFIVSRWLAWNPMRISRMLY*YSSVSL
Trigger: CAGAGAAACAGAGCTGTACCAGTACAACATCCTTGA...GATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR TCA 90 bp AGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCATGATGGTCTTCAGAGCTTaGTTGCAAGAAAGAATAGCT +
Preference number: 4 (lower is better)
Translates to: RWDFIVSRWLAWNPMRIMMVFRA*LQERIA
Trigger: AGCTATTCTTTCTTGCAATCAAGCTCTGAAGACCAT...CATGATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR TCA 90 bp AAGAACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCAAGGGCTCCTAAGACATaGACATGCACTTTAGATGGA +
Preference number: 4 (lower is better)
Translates to: KNLCGQVCASVRPPQALSRAPKT*TCTLDG
Trigger: TCCATCTAAAGTGCATGTTCATGTCTTAGGAGCCCT...TGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR TCA 90 bp TTCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATATAGCTGTCAAGATGTaGGCTTTGTCTTGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: FKMGFHCVQMAGLEPHADIAVKM*ALSCSD
Trigger: ATCAGAGCAAGACAAAGCTCACATCTTGACAGCTAT...ATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR TCA 90 bp AATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTATTAAAGGCGTGCACAGGAAGGCTGCCTTCTaGATGGTCTTTAGAGCAGTA +
Preference number: 4 (lower is better)
Translates to: NSEICMPLLLRAGIKGVHRKAAF*MVFRAV
Trigger: TACTGCTCTAAAGACCATTCAGAAGGCAGCCTTCCT...GTGCACGCCTTTAATACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR GCA 90 bp ACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCAGAATGTCTTTATCAATCTATaGCATGTCCGAGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: TFVVRSVQALDLLRLYQNVFINL*HVRATS
Trigger: AGAGGTGGCTCGGACATGGCATAGATTGATAAAGAC...ATTCTGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR GCA 90 bp AATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTATTAAAGGCGTGCACGCTTCCTTAGGTCTGTaGATTTTGACTTGGGCTTCG +
Preference number: 4 (lower is better)
Translates to: NSEICMPLLLRAGIKGVHASLGL*ILTWAS
Trigger: CGAAGCCCAAGTCAAAATGCACAGACCTAAGGAAGC...GTGCACGCCTTTAATACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR GCA 90 bp ACCAAGCTAATCTCAAATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTAACTCCACGGTAGCATaGAACCACACCAAGAGCGTT +
Preference number: 4 (lower is better)
Translates to: TKLISNSEICMPLLLRAGNSTVA*NHTKSV
Trigger: AACGCTCTTGGTGTGGTTGCATGCTACCGTGGAGTT...ACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATTTGAGATTAGCTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR GCA 90 bp TTCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATGCCCTTCATAAACAATaGCAGTGCAAACCCAATGAT +
Preference number: 4 (lower is better)
Translates to: FKMGFHCVQMAGLEPHADALHKQ*QCKPND
Trigger: ATCATTGGGTTTGCACTGGCATTGTTTATGAAGGGC...ATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR GCA 90 bp ACCAAGCTAATCTCAAATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTGAATATGAGCCACATTaGCAGCTACAGCACCTCCCT +
Preference number: 4 (lower is better)
Translates to: TKLISNSEICMPLLLRAGEYEPH*QLQHLP
Trigger: AGGGAGGTGCTGTAGCTGGCAATGTGGCTCATATTC...ACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATTTGAGATTAGCTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR GCA 90 bp AAGAACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCAAACAGCAGACCGCAATaGCAAGTACAAATCTACCCT +
Preference number: 4 (lower is better)
Translates to: KNLCGQVCASVRPPQALSNSRPQ*QVQIYP
Trigger: AGGGTAGATTTGTACTTGGCATTGCGGTCTGCTGTT...TGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CCA 90 bp CAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCAAACATGCACTTTAGATaGAGAAACAGGATGCAGACA +
Preference number: 4 (lower is better)
Translates to: QDGISLCPDGWPGTPCGSNMHFR*RNRMQT
Trigger: TGTCTGCATCCTGTTTCTCCATCTAAAGTGCATGTT...TGATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CCA 90 bp ACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCAGAATGCGTTCCAATGTAAGTaGTTATTACTGTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TFVVRSVQALDLLRLYQNAFQCK*LLLSSL
Trigger: GAGGCTGGACAGTAATAACCACTTACATTGGAACGC...ATTCTGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CCA 90 bp ACCAAGCTAATCTCAAATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTAGTTTATCATCTGCATaGCAGGCTGCCATCAGCCCA +
Preference number: 4 (lower is better)
Translates to: TKLISNSEICMPLLLRAGSLSSA*QAAISP
Trigger: TGGGCTGATGGCAGCCTGCCATGCAGATGATAAACT...ACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATTTGAGATTAGCTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR TCA 90 bp ACCAAGCTAATCTCAAATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTTTCTCAGCCAGCAACTaGCTCAATTTTCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: TKLISNSEICMPLLLRAGFSASN*LNFLHS
Trigger: GCTGTGGAGAAAATTGAGTCAGTTGCTGGCTGAGAA...ACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATTTGAGATTAGCTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR TCA 90 bp AAGAACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCATTGTTCTGCCTGGATTaGTTTGATGAAACAGTGCTG +
Preference number: 4 (lower is better)
Translates to: KNLCGQVCASVRPPQALSLFCLD*FDETVL
Trigger: CAGCACTGTTTCATCAAATCAATCCAGGCAGAACAA...TGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR TCA 90 bp GAAAACTCAGGGCCCTGGAAGTCAGAATTAGCAAAAGAATCCAAAGGTCATTGCGGGACTGAGCCATTTTaGATGCTTCATGGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: ENSGPWKSELAKESKGHCGTEPF*MLHGLA
Trigger: AGCAAGCCCATGAAGCATTCAAAATGGCTCAGTCCC...GCAATGACCTTTGGATTCTTTTGCTAATTCTGACTTCCAGGGCCCTGAGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR TCA 90 bp ACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCAGAATTTCAAATCCAGAATATaGGCCACATTGCCAGCTACA +
Preference number: 4 (lower is better)
Translates to: TFVVRSVQALDLLRLYQNFKSRI*ATLPAT
Trigger: TGTAGCTGGCAATGTGGCTCATATTCTGGATTTGAA...ATTCTGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR TCA 90 bp CAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCATTGGCTGAGTGTTATTaGGTAAAGCCAGTTTATCAT +
Preference number: 4 (lower is better)
Translates to: QDGISLCPDGWPGTPCGSLAECY*VKPVYH
Trigger: ATGATAAACTGGCTTTACTCAATAACACTCAGCCAA...TGATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR GCA 90 bp GAAAACTCAGGGCCCTGGAAGTCAGAATTAGCAAAAGAATCCAAAGGTCATTGCTGGCCTCTGAGTACCTaGCTAGGATTTGCTGTATCG +
Preference number: 4 (lower is better)
Translates to: ENSGPWKSELAKESKGHCWPLST*LGFAVS
Trigger: CGATACAGCAAATCCTAGGCAGGTACTCAGAGGCCA...GCAATGACCTTTGGATTCTTTTGCTAATTCTGACTTCCAGGGCCCTGAGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR GCA 90 bp AAGAACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCAGCCCTTCATAAACAATaGCAGTGCAAACCCAATGAT +
Preference number: 4 (lower is better)
Translates to: KNLCGQVCASVRPPQALSALHKQ*QCKPND
Trigger: ATCATTGGGTTTGCACTGGCATTGTTTATGAAGGGC...TGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR GCA 90 bp AGAATTAGCAAAAGAATCCAAAGGTCATTGCTTGAATTTGGGCTGGAGCAAGGGCACTTGTCTTTGTACTaGCACACTGTGGCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: RISKRIQRSLLEFGLEQGHLSLY*HTVALQ
Trigger: CTGCAGGGCCACAGTGTGGCAGTACAAAGACAAGTG...CCCTTGCTCCAGCCCAAATTCAAGCAATGACCTTTGGATTCTTTTGCTAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR GCA 90 bp TTTATTCTTTTCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCGAATATGAGCCACATTaGCAGCTACAGCACCTCCCT +
Preference number: 4 (lower is better)
Translates to: FILFKMGFHCVQMAGLEPEYEPH*QLQHLP
Trigger: AGGGAGGTGCTGTAGCTGGCAATGTGGCTCATATTC...GGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGAAAAGAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR GCA 90 bp TTTATTCTTTTCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCGTTGCCCTGTTGGGATaGCACTTGGAGACTCTTTCT +
Preference number: 4 (lower is better)
Translates to: FILFKMGFHCVQMAGLEPVALLG*HLETLS
Trigger: AGAAAGAGTCTCCAAGTGGCATCCCAACAGGGCAAC...GGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGAAAAGAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR GCA 90 bp ACCAAGCTAATCTCAAATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTAACTGTAACAATGCTTaGAAGAAGACAGCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: TKLISNSEICMPLLLRAGNCNNA*KKTASG
Trigger: CCCGCTGGCTGTCTTCTTGCAAGCATTGTTACAGTT...ACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATTTGAGATTAGCTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CCA 90 bp AATTGCAGTCCTTTGGGTCTGCCCTTAATGCTGCCTGTAAGTCAGCCACTGCTTGCAGCCTTTAGAAAGTaGGTAAGAGCCTTTGTTTTG +
Preference number: 4 (lower is better)
Translates to: NCSPLGLPLMLPVSQPLLAAFRK*VRAFVL
Trigger: CAAAACAAAGGCTCTTACCCACTTTCTAAAGGCTGC...AAGCAGTGGCTGACTTACAGGCAGCATTAAGGGCAGACCCAAAGGACTGCAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225220.2
CDS-3UTR CCA 90 bp ACCAAGCTAATCTCAAATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTACTGTATGTGGAGTCTaGGTTGAGCTCACTGGCTTT +
Preference number: 4 (lower is better)
Translates to: TKLISNSEICMPLLLRAGTVCGV*VELTGF
Trigger: AAAGCCAGTGAGCTCAACCCAGACTCCACATACAGT...ACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATTTGAGATTAGCTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CCA 90 bp ACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCAGAATTCAAGGATGTTGTACTaGTACAGCTCTGTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: TFVVRSVQALDLLRLYQNSRMLY*YSSVSL
Trigger: CAGAGAAACAGAGCTGTACCAGTACAACATCCTTGA...ATTCTGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR TCA 90 bp AATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTATTAAAGGCGTGCACAAGCCTTCTGTTAGATaGCGAACAGCATCTTCATAC +
Preference number: 4 (lower is better)
Translates to: NSEICMPLLLRAGIKGVHKPSVR*RTASSY
Trigger: GTATGAAGATGCTGTTCGTCATCTAACAGAAGGCTT...GTGCACGCCTTTAATACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR TCA 90 bp GCACCACCACACCTAGCTGATACAACTATAACTTTAAAATACGCTGTTCTGGTGGGGACTGAGCCATTTTaGATGCTTCATGGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: APPHLADTTITLKYAVLVGTEPF*MLHGLA
Trigger: AGCAAGCCCATGAAGCATTCAAAATGGCTCAGTCCC...CACCAGAACAGCGTATTTTAAAGTTATAGTTGTATCAGCTAGGTGTGGTGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR TCA 90 bp AAGAACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCACAACATTGTGAAAGCTaGAGCGGAATTCTGAATTCT +
Preference number: 4 (lower is better)
Translates to: KNLCGQVCASVRPPQALSQHCES*SGILNS
Trigger: AGAATTCAGAATTCCGCTTCAGCTTTCACAATGTTG...TGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR TCA 90 bp AAGAACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCAAATAACCCAACATTGTaGAAGCTGAAGCGGAATTCT +
Preference number: 4 (lower is better)
Translates to: KNLCGQVCASVRPPQALSNNPTL*KLKRNS
Trigger: AGAATTCCGCTTCAGCTTTCACAATGTTGGGTTATT...TGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR TCA 90 bp ACCAAGCTAATCTCAAATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTTCTACCCTCTTTGGCTaGGTGTTATTGAGTAAAGCC +
Preference number: 4 (lower is better)
Translates to: TKLISNSEICMPLLLRAGSTLFG*VLLSKA
Trigger: GGCTTTACTCAATAACACTCAGCCAAAGAGGGTAGA...ACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATTTGAGATTAGCTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR TCA 90 bp TTTATTCTTTTCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCTTCTTTGTCCTTAAGTaGAGCAGCAACAGCAGACCG +
Preference number: 4 (lower is better)
Translates to: FILFKMGFHCVQMAGLEPFFVLK*SSNSRP
Trigger: CGGTCTGCTGTTGCTGCTTCACTTAAGGACAAAGAA...GGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGAAAAGAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR TCA 90 bp ACCAAGCTAATCTCAAATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTTCACCAACACATCAATaGGTTCAGGGTCATCTTTCG +
Preference number: 4 (lower is better)
Translates to: TKLISNSEICMPLLLRAGSPTHQ*VQGHLS
Trigger: CGAAAGATGACCCTGAACTCATTGATGTGTTGGTGA...ACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATTTGAGATTAGCTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR GCA 90 bp TTTATTCTTTTCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCGCTTCCTTAGGTCTGTaGATTTTGACTTGGGCTTCG +
Preference number: 4 (lower is better)
Translates to: FILFKMGFHCVQMAGLEPASLGL*ILTWAS
Trigger: CGAAGCCCAAGTCAAAATGCACAGACCTAAGGAAGC...GGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGAAAAGAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR GCA 90 bp GATTTGCTGTATCGCCGCCACCTTAAACACACTGTATGTGGAGTCTGGGTTGAGAGCATCTTTCTCAAGTaGTCTTTGGAAACTCACTTC +
Preference number: 4 (lower is better)
Translates to: DLLYRRHLKHTVCGVWVESIFLK*SLETHF
Trigger: GAAGTGAGTTTCCAAAGAGCACTTGAGAAAGATGCT...CTCAACCCAGACTCCACATACAGTGTGTTTAAGGTGGCGGCGATACAGCAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225220.2
CDS-3UTR GCA 90 bp AGAATTAGCAAAAGAATCCAAAGGTCATTGCTTGAATTTGGGCTGGAGCAAGGGTACCTGCCTAGGATTTaGTGTATCGCCGCCACCTTA +
Preference number: 4 (lower is better)
Translates to: RISKRIQRSLLEFGLEQGYLPRI*CIAATL
Trigger: TAAGGTGGCGGCGATACAGCAAATCCTAGGCAGGTA...CCCTTGCTCCAGCCCAAATTCAAGCAATGACCTTTGGATTCTTTTGCTAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR GCA 90 bp GCACCACCACACCTAGCTGATACAACTATAACTTTAAAATACGCTGTTCTGGTGAACTCCACGGTAGCATaGAACCACACCAAGAGCGTT +
Preference number: 4 (lower is better)
Translates to: APPHLADTTITLKYAVLVNSTVA*NHTKSV
Trigger: AACGCTCTTGGTGTGGTTGCATGCTACCGTGGAGTT...CACCAGAACAGCGTATTTTAAAGTTATAGTTGTATCAGCTAGGTGTGGTGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR GCA 90 bp ACCAAGCTAATCTCAAATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTCTGAGCCATTTTGAATaGTTCATGGGCTTGCTCGAT +
Preference number: 4 (lower is better)
Translates to: TKLISNSEICMPLLLRAGLSHFE*FMGLLD
Trigger: ATCGAGCAAGCCCATGAAGCATTCAAAATGGCTCAG...ACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATTTGAGATTAGCTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR GCA 90 bp AAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCATAGTACAAACCCAATATaGATAACCTATTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: KMGFHCVQMAGLEPHADHSTNPI*ITYCSF
Trigger: GAAGGAGCAATAGGTTATGCATATTGGGTTTGTACT...ATGATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR TCA 90 bp GAAAACTCAGGGCCCTGGAAGTCAGAATTAGCAAAAGAATCCAAAGGTCATTGCAGCTTTGTCTTGCTCTaGTTTACAAACTGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: ENSGPWKSELAKESKGHCSFVLL*FTNCQG
Trigger: GCCTTGGCAGTTTGTAAATCAGAGCAAGACAAAGCT...GCAATGACCTTTGGATTCTTTTGCTAATTCTGACTTCCAGGGCCCTGAGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR TCA 90 bp ACCAAGCTAATCTCAAATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTATAGCTGTCAAGATGTaGGCTTTGTCTTGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: TKLISNSEICMPLLLRAGIAVKM*ALSCSD
Trigger: ATCAGAGCAAGACAAAGCTCACATCTTGACAGCTAT...ACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATTTGAGATTAGCTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR TCA 90 bp AATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTATTAAAGGCGTGCACGCATTTGAAGAGAAATaGCTTGGCTGCATCCATTTT +
Preference number: 4 (lower is better)
Translates to: NSEICMPLLLRAGIKGVHAFEEK*LGCIHF
Trigger: AAAATGGATGCAGCCAAGTCATTTCTCTTCAAATGC...GTGCACGCCTTTAATACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR TCA 90 bp TTTATTCTTTTCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCTCTACCCTCTTTGGCTaGGTGTTATTGAGTAAAGCC +
Preference number: 4 (lower is better)
Translates to: FILFKMGFHCVQMAGLEPSTLFG*VLLSKA
Trigger: GGCTTTACTCAATAACACTCAGCCAAAGAGGGTAGA...GGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGAAAAGAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR TCA 90 bp ACCAAGCTAATCTCAAATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTAGGAGTGACATACACTaGACTTGTCTCAACAGTAAG +
Preference number: 4 (lower is better)
Translates to: TKLISNSEICMPLLLRAGRSDIH*TCLNSK
Trigger: CTTACTGTTGAGACAAGTTCAGTGTATGTCACTCCT...ACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATTTGAGATTAGCTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR TCA 90 bp TTTATTCTTTTCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCTCACCAACACATCAATaGGTTCAGGGTCATCTTTCG +
Preference number: 4 (lower is better)
Translates to: FILFKMGFHCVQMAGLEPSPTHQ*VQGHLS
Trigger: CGAAAGATGACCCTGAACTCATTGATGTGTTGGTGA...GGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGAAAAGAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000225147.2
CDS-3UTR GCA 90 bp AATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTATTAAAGGCGTGCACAGCATCTTTCTCAAGTaGTCTTTGGAAACTCACTTC +
Preference number: 4 (lower is better)
Translates to: NSEICMPLLLRAGIKGVHSIFLK*SLETHF
Trigger: GAAGTGAGTTTCCAAAGAGCACTTGAGAAAGATGCT...GTGCACGCCTTTAATACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR GCA 90 bp GCACCACCACACCTAGCTGATACAACTATAACTTTAAAATACGCTGTTCTGGTGAACTTTACCCATGTGTaGATCCAGTCTCGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: APPHLADTTITLKYAVLVNFTHV*IQSRSL
Trigger: AAGGCTGCGAGACTGGATGCACACATGGGTAAAGTT...CACCAGAACAGCGTATTTTAAAGTTATAGTTGTATCAGCTAGGTGTGGTGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR GCA 90 bp AGAATTAGCAAAAGAATCCAAAGGTCATTGCTTGAATTTGGGCTGGAGCAAGGGGATGGAGAAACAGGATaGAGACAGGTACAGGCATCT +
Preference number: 4 (lower is better)
Translates to: RISKRIQRSLLEFGLEQGDGETG*RQVQAS
Trigger: AGATGCCTGTACCTGTCTGCATCCTGTTTCTCCATC...CCCTTGCTCCAGCCCAAATTCAAGCAATGACCTTTGGATTCTTTTGCTAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR GCA 90 bp TTTATTCTTTTCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCATCACCATGAGTCTCTaGATTCCTCACCAACACATC +
Preference number: 4 (lower is better)
Translates to: FILFKMGFHCVQMAGLEPITMSL*IPHQHI
Trigger: GATGTGTTGGTGAGGAATGCAGAGACTCATGGTGAT...GGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGAAAAGAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000225147.2
CDS-3UTR CCA 90 bp GCACCACCACACCTAGCTGATACAACTATAACTTTAAAATACGCTGTTCTGGTGACTGTATGTGGAGTCTaGGTTGAGCTCACTGGCTTT +
Preference number: 4 (lower is better)
Translates to: APPHLADTTITLKYAVLVTVCGV*VELTGF
Trigger: AAAGCCAGTGAGCTCAACCCAGACTCCACATACAGT...CACCAGAACAGCGTATTTTAAAGTTATAGTTGTATCAGCTAGGTGTGGTGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CCA 90 bp AATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTATTAAAGGCGTGCACAAGATAACAGCTGGCTaGTCAGGGTTACTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: NSEICMPLLLRAGIKGVHKITAG*SGLLFK
Trigger: TTTGAAAAGTAACCCTGACCAGCCAGCTGTTATCTT...GTGCACGCCTTTAATACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
3UTR CAA 72 bp CTGGAAGTCAGAATTAGCAAAAGAATCCAAAGGTCATaGCTTGAATTTGGGCTGGAGCAAGGGCTAACCACA +
Preference number: 4 (lower is better)
Translates to: LEVRISKRIQRS*LEFGLEQGLTT
Trigger: TGTGGTTAGCCCTTGCTCCAGCCCAAATTCAAGCAATGACCTTTGGATTCTTTTGCTAATTCTGACTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR TCA 90 bp TTTATTCTTTTCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCTTGTTCTGCCTGGATTaGTTTGATGAAACAGTGCTG +
Preference number: 4 (lower is better)
Translates to: FILFKMGFHCVQMAGLEPLFCLD*FDETVL
Trigger: CAGCACTGTTTCATCAAATCAATCCAGGCAGAACAA...GGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGAAAAGAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR TCA 90 bp GCACCACCACACCTAGCTGATACAACTATAACTTTAAAATACGCTGTTCTGGTGAGCTTTGTCTTGCTCTaGTTTACAAACTGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: APPHLADTTITLKYAVLVSFVLL*FTNCQG
Trigger: GCCTTGGCAGTTTGTAAATCAGAGCAAGACAAAGCT...CACCAGAACAGCGTATTTTAAAGTTATAGTTGTATCAGCTAGGTGTGGTGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR TCA 90 bp GAAAACTCAGGGCCCTGGAAGTCAGAATTAGCAAAAGAATCCAAAGGTCATTGCACCAGTGACAACTTGTaGGAAAGACCACTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: ENSGPWKSELAKESKGHCTSDNL*ERPLFK
Trigger: CTTGAAAAGTGGTCTTTCTCACAAGTTGTCACTGGT...GCAATGACCTTTGGATTCTTTTGCTAATTCTGACTTCCAGGGCCCTGAGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR GCA 90 bp AAGAACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCATTTATATTCCACTATTaGCATAGCTGTCAAGATGTG +
Preference number: 4 (lower is better)
Translates to: KNLCGQVCASVRPPQALSFIFHY*HSCQDV
Trigger: CACATCTTGACAGCTATGGCAATAGTGGAATATAAA...TGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR GCA 90 bp AGAATTAGCAAAAGAATCCAAAGGTCATTGCTTGAATTTGGGCTGGAGCAAGGGTCTGTAACACATCTCTaGAGCACCCATCATTCCTTG +
Preference number: 4 (lower is better)
Translates to: RISKRIQRSLLEFGLEQGSVTHL*STHHSL
Trigger: CAAGGAATGATGGGTGCTGCAGAGATGTGTTACAGA...CCCTTGCTCCAGCCCAAATTCAAGCAATGACCTTTGGATTCTTTTGCTAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR GCA 90 bp CACCTAGCTGATACAACTATAACTTTAAAATACGCTGTTCTGGTGAGAACTCTTCCGCCGTGTCTCTCTTaGTCCCATCTTACGGTTGAA +
Preference number: 4 (lower is better)
Translates to: HLADTTITLKYAVLVRTLPPCLS*SHLTVE
Trigger: TTCAACCGTAAGATGGGAGCAAGAGAGACACGGCGG...AAGAGTTCTCACCAGAACAGCGTATTTTAAAGTTATAGTTGTATCAGCTAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR GCA 90 bp AGAATTAGCAAAAGAATCCAAAGGTCATTGCTTGAATTTGGGCTGGAGCAAGGGATCACCATGAGTCTCTaGATTCCTCACCAACACATC +
Preference number: 4 (lower is better)
Translates to: RISKRIQRSLLEFGLEQGITMSL*IPHQHI
Trigger: GATGTGTTGGTGAGGAATGCAGAGACTCATGGTGAT...CCCTTGCTCCAGCCCAAATTCAAGCAATGACCTTTGGATTCTTTTGCTAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CCA 90 bp CACCTAGCTGATACAACTATAACTTTAAAATACGCTGTTCTGGTGAGAACTCTTCTGCTTTTGACAGTGTaGCATCGCGCATTGCCAACC +
Preference number: 4 (lower is better)
Translates to: HLADTTITLKYAVLVRTLLLLTV*HRALPT
Trigger: GGTTGGCAATGCGCGATGCCACACTGTCAAAAGCAG...AAGAGTTCTCACCAGAACAGCGTATTTTAAAGTTATAGTTGTATCAGCTAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CCA 90 bp GCACCACCACACCTAGCTGATACAACTATAACTTTAAAATACGCTGTTCTGGTGAGGCTGCCTTCTGAATaGTCTTTAGAGCAGTATTGC +
Preference number: 4 (lower is better)
Translates to: APPHLADTTITLKYAVLVRLPSE*SLEQYC
Trigger: GCAATACTGCTCTAAAGACCATTCAGAAGGCAGCCT...CACCAGAACAGCGTATTTTAAAGTTATAGTTGTATCAGCTAGGTGTGGTGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CCA 90 bp AGAATTAGCAAAAGAATCCAAAGGTCATTGCTTGAATTTGGGCTGGAGCAAGGGAGGCTGCCTTCTGAATaGTCTTTAGAGCAGTATTGC +
Preference number: 4 (lower is better)
Translates to: RISKRIQRSLLEFGLEQGRLPSE*SLEQYC
Trigger: GCAATACTGCTCTAAAGACCATTCAGAAGGCAGCCT...CCCTTGCTCCAGCCCAAATTCAAGCAATGACCTTTGGATTCTTTTGCTAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR TCA 90 bp ACCAAGCTAATCTCAAATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTTGTACTCTTTGTTTCTaGTTGCATCTCTTGCACTTT +
Preference number: 4 (lower is better)
Translates to: TKLISNSEICMPLLLRAGCTLCF*LHLLHF
Trigger: AAAGTGCAAGAGATGCAATCAGAAACAAAGAGTACA...ACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATTTGAGATTAGCTTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR TCA 90 bp GCACCACCACACCTAGCTGATACAACTATAACTTTAAAATACGCTGTTCTGGTGTTCAAATCCAGAATATaGGCCACATTGCCAGCTACA +
Preference number: 4 (lower is better)
Translates to: APPHLADTTITLKYAVLVFKSRI*ATLPAT
Trigger: TGTAGCTGGCAATGTGGCTCATATTCTGGATTTGAA...CACCAGAACAGCGTATTTTAAAGTTATAGTTGTATCAGCTAGGTGTGGTGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR GCA 90 bp ACCAAGCTAATCTCAAATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTAGTACAAACCCAATATaGATAACCTATTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: TKLISNSEICMPLLLRAGSTNPI*ITYCSF
Trigger: GAAGGAGCAATAGGTTATGCATATTGGGTTTGTACT...ACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATTTGAGATTAGCTTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR GCA 90 bp AGAATTAGCAAAAGAATCCAAAGGTCATTGCTTGAATTTGGGCTGGAGCAAGGGATTGCTTTTATCTTCTaGTGTACTGCTTCCCATGGC +
Preference number: 4 (lower is better)
Translates to: RISKRIQRSLLEFGLEQGIAFIF*CTASHG
Trigger: GCCATGGGAAGCAGTACAGCAGAAGATAAAAGCAAT...CCCTTGCTCCAGCCCAAATTCAAGCAATGACCTTTGGATTCTTTTGCTAATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CCA 90 bp AGAATTAGCAAAAGAATCCAAAGGTCATTGCTTGAATTTGGGCTGGAGCAAGGGGCAGCCTTTAGAAAGTaGGTAAGAGCCTTTGTTTTG +
Preference number: 4 (lower is better)
Translates to: RISKRIQRSLLEFGLEQGAAFRK*VRAFVL
Trigger: CAAAACAAAGGCTCTTACCCACTTTCTAAAGGCTGC...CCCTTGCTCCAGCCCAAATTCAAGCAATGACCTTTGGATTCTTTTGCTAATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CCA 90 bp ACAACTATAACTTTAAAATACGCTGTTCTGGTGAGAACTCTTGATTCATTGCCTGACAGCAGGGTCATCTaGAGAAAGGAAGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: TTITLKYAVLVRTLDSLPDSRVI*RKEGCL
Trigger: AAGGCAGCCTTCCTTTCTCCAGATGACCCTGCTGTC...AGGCAATGAATCAAGAGTTCTCACCAGAACAGCGTATTTTAAAGTTATAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR TCA 90 bp GCACCACCACACCTAGCTGATACAACTATAACTTTAAAATACGCTGTTCTGGTGTGGGTCTCATTATTCTaGTCTTCTATATTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: APPHLADTTITLKYAVLVWVSLF*SSIFSA
Trigger: GGCTGAGAATATAGAAGATCAGAATAATGAGACCCA...CACCAGAACAGCGTATTTTAAAGTTATAGTTGTATCAGCTAGGTGTGGTGGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR TCA 90 bp AGAATTAGCAAAAGAATCCAAAGGTCATTGCTTGAATTTGGGCTGGAGCAAGGGATGGTCTTCAGAGCTTaGTTGCAAGAAAGAATAGCT +
Preference number: 4 (lower is better)
Translates to: RISKRIQRSLLEFGLEQGMVFRA*LQERIA
Trigger: AGCTATTCTTTCTTGCAATCAAGCTCTGAAGACCAT...CCCTTGCTCCAGCCCAAATTCAAGCAATGACCTTTGGATTCTTTTGCTAATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR TCA 90 bp GCACCACCACACCTAGCTGATACAACTATAACTTTAAAATACGCTGTTCTGGTGAATAACCCAACATTGTaGAAGCTGAAGCGGAATTCT +
Preference number: 4 (lower is better)
Translates to: APPHLADTTITLKYAVLVNNPTL*KLKRNS
Trigger: AGAATTCCGCTTCAGCTTTCACAATGTTGGGTTATT...CACCAGAACAGCGTATTTTAAAGTTATAGTTGTATCAGCTAGGTGTGGTGGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR TCA 90 bp CACCTAGCTGATACAACTATAACTTTAAAATACGCTGTTCTGGTGAGAACTCTTAGGAAGGCTGCCTTCTaGATGGTCTTTAGAGCAGTA +
Preference number: 4 (lower is better)
Translates to: HLADTTITLKYAVLVRTLRKAAF*MVFRAV
Trigger: TACTGCTCTAAAGACCATTCAGAAGGCAGCCTTCCT...AAGAGTTCTCACCAGAACAGCGTATTTTAAAGTTATAGTTGTATCAGCTAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR TCA 90 bp ACAACTATAACTTTAAAATACGCTGTTCTGGTGAGAACTCTTGATTCATTGCCTATCATTCCTTGGGACTaGTACACCTGTGCCAACCAC +
Preference number: 4 (lower is better)
Translates to: TTITLKYAVLVRTLDSLPIIPWD*YTCANH
Trigger: GTGGTTGGCACAGGTGTATCAGTCCCAAGGAATGAT...AGGCAATGAATCAAGAGTTCTCACCAGAACAGCGTATTTTAAAGTTATAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR GCA 90 bp CACCTAGCTGATACAACTATAACTTTAAAATACGCTGTTCTGGTGAGAACTCTTGATGGAGAAACAGGATaGAGACAGGTACAGGCATCT +
Preference number: 4 (lower is better)
Translates to: HLADTTITLKYAVLVRTLDGETG*RQVQAS
Trigger: AGATGCCTGTACCTGTCTGCATCCTGTTTCTCCATC...AAGAGTTCTCACCAGAACAGCGTATTTTAAAGTTATAGTTGTATCAGCTAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CCA 90 bp AGAATTAGCAAAAGAATCCAAAGGTCATTGCTTGAATTTGGGCTGGAGCAAGGGCACCAAAGTTATCTATaGTCTTCAGAGCTTGATTGC +
Preference number: 4 (lower is better)
Translates to: RISKRIQRSLLEFGLEQGHQSYL*SSELDC
Trigger: GCAATCAAGCTCTGAAGACCATAGATAACTTTGGTG...CCCTTGCTCCAGCCCAAATTCAAGCAATGACCTTTGGATTCTTTTGCTAATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CCA 90 bp AGAATTAGCAAAAGAATCCAAAGGTCATTGCTTGAATTTGGGCTGGAGCAAGGGAACATGCACTTTAGATaGAGAAACAGGATGCAGACA +
Preference number: 4 (lower is better)
Translates to: RISKRIQRSLLEFGLEQGNMHFR*RNRMQT
Trigger: TGTCTGCATCCTGTTTCTCCATCTAAAGTGCATGTT...CCCTTGCTCCAGCCCAAATTCAAGCAATGACCTTTGGATTCTTTTGCTAATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR TCA 90 bp AGAATTAGCAAAAGAATCCAAAGGTCATTGCTTGAATTTGGGCTGGAGCAAGGGTTGGCTGAGTGTTATTaGGTAAAGCCAGTTTATCAT +
Preference number: 4 (lower is better)
Translates to: RISKRIQRSLLEFGLEQGLAECY*VKPVYH
Trigger: ATGATAAACTGGCTTTACTCAATAACACTCAGCCAA...CCCTTGCTCCAGCCCAAATTCAAGCAATGACCTTTGGATTCTTTTGCTAATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR GCA 90 bp ACAACTATAACTTTAAAATACGCTGTTCTGGTGAGAACTCTTGATTCATTGCCTAACTGTAACAATGCTTaGAAGAAGACAGCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: TTITLKYAVLVRTLDSLPNCNNA*KKTASG
Trigger: CCCGCTGGCTGTCTTCTTGCAAGCATTGTTACAGTT...AGGCAATGAATCAAGAGTTCTCACCAGAACAGCGTATTTTAAAGTTATAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CCA 90 bp CACCTAGCTGATACAACTATAACTTTAAAATACGCTGTTCTGGTGAGAACTCTTGCGTTCCAATGTAAGTaGTTATTACTGTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: HLADTTITLKYAVLVRTLAFQCK*LLLSSL
Trigger: GAGGCTGGACAGTAATAACCACTTACATTGGAACGC...AAGAGTTCTCACCAGAACAGCGTATTTTAAAGTTATAGTTGTATCAGCTAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR GCA 90 bp GCACCACCACACCTAGCTGATACAACTATAACTTTAAAATACGCTGTTCTGGTGTTTATATTCCACTATTaGCATAGCTGTCAAGATGTG +
Preference number: 4 (lower is better)
Translates to: APPHLADTTITLKYAVLVFIFHY*HSCQDV
Trigger: CACATCTTGACAGCTATGGCAATAGTGGAATATAAA...CACCAGAACAGCGTATTTTAAAGTTATAGTTGTATCAGCTAGGTGTGGTGGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR GCA 90 bp AGAATTAGCAAAAGAATCCAAAGGTCATTGCTTGAATTTGGGCTGGAGCAAGGGTCTTTAGAGCAGTATTaGTTTTATCTTCTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: RISKRIQRSLLEFGLEQGSLEQY*FYLLLY
Trigger: GTACAGCAGAAGATAAAAGCAATACTGCTCTAAAGA...CCCTTGCTCCAGCCCAAATTCAAGCAATGACCTTTGGATTCTTTTGCTAATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR GCA 90 bp ACTATAACTTTAAAATACGCTGTTCTGGTGAGAACTCTTGATTCATTGCCTCATAACAGCAGACCGCAATaGCAAGTACAAATCTACCCT +
Preference number: 4 (lower is better)
Translates to: TITLKYAVLVRTLDSLPHNSRPQ*QVQIYP
Trigger: AGGGTAGATTTGTACTTGGCATTGCGGTCTGCTGTT...ATGAGGCAATGAATCAAGAGTTCTCACCAGAACAGCGTATTTTAAAGTTATAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR GCA 90 bp ACAACTATAACTTTAAAATACGCTGTTCTGGTGAGAACTCTTGATTCATTGCCTTCTGTAACACATCTCTaGAGCACCCATCATTCCTTG +
Preference number: 4 (lower is better)
Translates to: TTITLKYAVLVRTLDSLPSVTHL*STHHSL
Trigger: CAAGGAATGATGGGTGCTGCAGAGATGTGTTACAGA...AGGCAATGAATCAAGAGTTCTCACCAGAACAGCGTATTTTAAAGTTATAGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR GCA 90 bp ACTATAACTTTAAAATACGCTGTTCTGGTGAGAACTCTTGATTCATTGCCTCATATCACCATGAGTCTCTaGATTCCTCACCAACACATC +
Preference number: 4 (lower is better)
Translates to: TITLKYAVLVRTLDSLPHITMSL*IPHQHI
Trigger: GATGTGTTGGTGAGGAATGCAGAGACTCATGGTGAT...ATGAGGCAATGAATCAAGAGTTCTCACCAGAACAGCGTATTTTAAAGTTATAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000225147.2
CDS-3UTR TCA 90 bp CACCTAGCTGATACAACTATAACTTTAAAATACGCTGTTCTGGTGAGAACTCTTCAACATTGTGAAAGCTaGAGCGGAATTCTGAATTCT +
Preference number: 4 (lower is better)
Translates to: HLADTTITLKYAVLVRTLQHCES*SGILNS
Trigger: AGAATTCAGAATTCCGCTTCAGCTTTCACAATGTTG...AAGAGTTCTCACCAGAACAGCGTATTTTAAAGTTATAGTTGTATCAGCTAGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR TCA 90 bp CACCTAGCTGATACAACTATAACTTTAAAATACGCTGTTCTGGTGAGAACTCTTTGTACTCTTTGTTTCTaGTTGCATCTCTTGCACTTT +
Preference number: 4 (lower is better)
Translates to: HLADTTITLKYAVLVRTLCTLCF*LHLLHF
Trigger: AAAGTGCAAGAGATGCAATCAGAAACAAAGAGTACA...AAGAGTTCTCACCAGAACAGCGTATTTTAAAGTTATAGTTGTATCAGCTAGGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR GCA 90 bp ACAACTATAACTTTAAAATACGCTGTTCTGGTGAGAACTCTTGATTCATTGCCTAGCATCTTTCTCAAGTaGTCTTTGGAAACTCACTTC +
Preference number: 4 (lower is better)
Translates to: TTITLKYAVLVRTLDSLPSIFLK*SLETHF
Trigger: GAAGTGAGTTTCCAAAGAGCACTTGAGAAAGATGCT...AGGCAATGAATCAAGAGTTCTCACCAGAACAGCGTATTTTAAAGTTATAGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CCA 90 bp ACAACTATAACTTTAAAATACGCTGTTCTGGTGAGAACTCTTGATTCATTGCCTCACCAAAGTTATCTATaGTCTTCAGAGCTTGATTGC +
Preference number: 4 (lower is better)
Translates to: TTITLKYAVLVRTLDSLPHQSYL*SSELDC
Trigger: GCAATCAAGCTCTGAAGACCATAGATAACTTTGGTG...AGGCAATGAATCAAGAGTTCTCACCAGAACAGCGTATTTTAAAGTTATAGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CCA 90 bp ACTATAACTTTAAAATACGCTGTTCTGGTGAGAACTCTTGATTCATTGCCTCATAAGATAACAGCTGGCTaGTCAGGGTTACTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: TITLKYAVLVRTLDSLPHKITAG*SGLLFK
Trigger: TTTGAAAAGTAACCCTGACCAGCCAGCTGTTATCTT...ATGAGGCAATGAATCAAGAGTTCTCACCAGAACAGCGTATTTTAAAGTTATAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR GCA 90 bp ACAACTATAACTTTAAAATACGCTGTTCTGGTGAGAACTCTTGATTCATTGCCTTCTTTAGAGCAGTATTaGTTTTATCTTCTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: TTITLKYAVLVRTLDSLPSLEQY*FYLLLY
Trigger: GTACAGCAGAAGATAAAAGCAATACTGCTCTAAAGA...AGGCAATGAATCAAGAGTTCTCACCAGAACAGCGTATTTTAAAGTTATAGTTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CAA 90 bp AGATGGCTGGCCTGGAACCCCATGCGGATCATGATGGCCTGGAACTCACAGAGAAGCTTCCCACTCCAGTaGCCCTGTTGGGATGCCACT +
Preference number: 5 (lower is better)
Translates to: RWLAWNPMRIMMAWNSQRSFPLQ*PCWDAT
Trigger: AGTGGCATCCCAACAGGGCAACTGGAGTGGGAAGCT...TCTCTGTGAGTTCCAGGCCATCATGATCCGCATGGGGTTCCAGGCCAGCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS CCA 90 bp AGGTACCACCGAGCGGCTGATACAATTGAGCTGGGGTATCCAGTCTaGTACACGATTCTCTCCAAAAGCCGCCGTGTCTCTCTTGCTCCC +
Preference number: 5 (lower is better)
Translates to: RYHRAADTIELGYPV*YTILSKSRRVSLAP
Trigger: GGGAGCAAGAGAGACACGGCGGCTTTTGGAGAGAATCGTGTACCAGACTGGATACCCCAGCTCAATTGTATCAGCCGCTCGGTGGTACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS-3UTR CAA 90 bp AGATGGCTGGCCTGGAACCCCATGCGGATCATGATGGCCTGGAACTCACAGAGAACTTCTCATACAAACTaGCTAGCCCCTGCCAGGCGA +
Preference number: 5 (lower is better)
Translates to: RWLAWNPMRIMMAWNSQRTSHTN*LAPARR
Trigger: TCGCCTGGCAGGGGCTAGCAAGTTTGTATGAGAAGT...TCTCTGTGAGTTCCAGGCCATCATGATCCGCATGGGGTTCCAGGCCAGCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS CCA 90 bp AGCGCCTGTGTTCAGACAGGCGAGGCCTTGGAGAACCAGCAGTCCTaGGGTATTATCTACGTCAGAAACCTGATCAAGGGTACGAACTGC +
Preference number: 5 (lower is better)
Translates to: SACVQTGEALENQQS*GIIYVRNLIKGTNC
Trigger: GCAGTTCGTACCCTTGATCAGGTTTCTGACGTAGATAATACCCCAGGACTGCTGGTTCTCCAAGGCCTCGCCTGTCTGAACACAGGCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
ENSMUST00000224790.2
CDS TCA 90 bp CCTCTCCTCAGCCACGCCCACTTAGCTGCTCCAGCACTTGCCTTCTaGGTTACTGCTGTCAAGATAGCTAACGCAGTTTCCGTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: PLLSHAHLAAPALAF*VTAVKIANAVSVSS
Trigger: TGAAGACACGGAAACTGCGTTAGCTATCTTGACAGCAGTAACTCAGAAGGCAAGTGCTGGAGCAGCTAAGTGGGCGTGGCTGAGGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS TCA 90 bp GCTTCCAAAGGCAAGACACATCAGCTCGATGCTGCAGGGCCCGGGTaGAATATCCCAGCGCTTGTTCCACATAGTCCACAGCTTTTCCAT +
Preference number: 5 (lower is better)
Translates to: ASKGKTHQLDAAGPG*NIPALVPHSPQLFH
Trigger: ATGGAAAAGCTGTGGACTATGTGGAACAAGCGCTGGGATATTTCACCCGGGCCCTGCAGCATCGAGCTGATGTGTCTTGCCTTTGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS-3UTR CAA 90 bp AGATGGCTGGCCTGGAACCCCATGCGGATCATGATGGCCTGGAACTCACAGAGACTGTTGGGATGCCACTaGGAGACTCTTTCTGTAACA +
Preference number: 5 (lower is better)
Translates to: RWLAWNPMRIMMAWNSQRLLGCH*ETLSVT
Trigger: TGTTACAGAAAGAGTCTCCAAGTGGCATCCCAACAG...TCTCTGTGAGTTCCAGGCCATCATGATCCGCATGGGGTTCCAGGCCAGCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CAA 90 bp TCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCCCTTCAAGGCCTCACTaGTGGCTTCTTGAACCAAGG +
Preference number: 5 (lower is better)
Translates to: SRWDFIVSRWLAWNPMRIPSRPH*WLLEPR
Trigger: CCTTGGTTCAAGAAGCCACAAGTGAGGCCTTGAAGG...GATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS TCA 90 bp ACATTGCCAGCTACAGCACCTCCCTTTGCGCTCCGCTGTGTGTACTaGGCAACAATTCGAGATAGCAAAGACCAAAGAGCAGGGTCAGCA +
Preference number: 5 (lower is better)
Translates to: TLPATAPPFALRCVY*ATIRDSKDQRAGSA
Trigger: TGCTGACCCTGCTCTTTGGTCTTTGCTATCTCGAATTGTTGCTCAGTACACACAGCGGAGCGCAAAGGGAGGTGCTGTAGCTGGCAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS GCA 90 bp GCCCTGTTGGGATGCCACTTGGAGACTCTTTCTGTAACACATCTCTaGAGCACCCATCATTCCTTGGGACTGATACACCTGTGCCAACCA +
Preference number: 5 (lower is better)
Translates to: ALLGCHLETLSVTHL*STHHSLGLIHLCQP
Trigger: TGGTTGGCACAGGTGTATCAGTCCCAAGGAATGATGGGTGCTGCAGAGATGTGTTACAGAAAGAGTCTCCAAGTGGCATCCCAACAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS GCA 90 bp CTTCAACAGACTCGAGAGCTTCCCACTCCAGTTGCCCTGTTGGGATaGCACTTGGAGACTCTTTCTGTAACACATCTCTGCAGCACCCAT +
Preference number: 5 (lower is better)
Translates to: LQQTRELPTPVALLG*HLETLSVTHLCSTH
Trigger: ATGGGTGCTGCAGAGATGTGTTACAGAAAGAGTCTCCAAGTGGCATCCCAACAGGGCAACTGGAGTGGGAAGCTCTCGAGTCTGTTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS-3UTR CAA 90 bp TCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCACGACTTCAAGGCTGTaGTGTAGCCACCTCTGCTTA +
Preference number: 5 (lower is better)
Translates to: SRWDFIVSRWLAWNPMRITTSRL*CSHLCL
Trigger: TAAGCAGAGGTGGCTACACAACAGCCTTGAAGTCGT...GATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CAA 90 bp TCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCCCTGCAGTGCATAAATaGCTGACATCAGAAGGCAGC +
Preference number: 5 (lower is better)
Translates to: SRWDFIVSRWLAWNPMRIPAVHK*LTSEGS
Trigger: GCTGCCTTCTGATGTCAGCAATTTATGCACTGCAGG...GATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS GCA 90 bp CAAGAAGGGCTAGCTTCAACAGACTCGAGAGCTTCCCACTCCAGTTaGCCTGTTGGGATGCCACTTGGAGACTCTTTCTGTAACACATCT +
Preference number: 5 (lower is better)
Translates to: QEGLASTDSRASHSS*PVGMPLGDSFCNTS
Trigger: AGATGTGTTACAGAAAGAGTCTCCAAGTGGCATCCCAACAGGGCAACTGGAGTGGGAAGCTCTCGAGTCTGTTGAAGCTAGCCCTTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS-3UTR CAA 90 bp AGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCATGTTAGGTCTGTGCATTTaGACTTGGGCTTCGGCTAGA +
Preference number: 5 (lower is better)
Translates to: RWDFIVSRWLAWNPMRIMLGLCI*TWASAR
Trigger: TCTAGCCGAAGCCCAAGTCAAAATGCACAGACCTAA...CATGATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CAA 90 bp GCACCACCACACCTAGCTGATACAACTATAACTTTAAAATACGCTGTTCTGGTGCAGACAGGCGAGGCCTaGGAGAACCAGCAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: APPHLADTTITLKYAVLVQTGEA*ENQQSW
Trigger: CCAGGACTGCTGGTTCTCCAAGGCCTCGCCTGTCTG...CACCAGAACAGCGTATTTTAAAGTTATAGTTGTATCAGCTAGGTGTGGTGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CAA 90 bp AGAATTAGCAAAAGAATCCAAAGGTCATTGCTTGAATTTGGGCTGGAGCAAGGGCAGACAGGCGAGGCCTaGGAGAACCAGCAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: RISKRIQRSLLEFGLEQGQTGEA*ENQQSW
Trigger: CCAGGACTGCTGGTTCTCCAAGGCCTCGCCTGTCTG...CCCTTGCTCCAGCCCAAATTCAAGCAATGACCTTTGGATTCTTTTGCTAATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CAA 90 bp AAGAACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCACATTCAGTGCTGCTTTaGACAGTGTGGCATCGCGCA +
Preference number: 5 (lower is better)
Translates to: KNLCGQVCASVRPPQALSHSVLL*TVWHRA
Trigger: TGCGCGATGCCACACTGTCAAAAGCAGCACTGAATG...TGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CAA 90 bp ACCAAGCTAATCTCAAATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTAGCTTCCCACTCCAGTaGCCCTGTTGGGATGCCACT +
Preference number: 5 (lower is better)
Translates to: TKLISNSEICMPLLLRAGSFPLQ*PCWDAT
Trigger: AGTGGCATCCCAACAGGGCAACTGGAGTGGGAAGCT...ACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATTTGAGATTAGCTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CAA 90 bp ACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCAGAATCCTTCAAGGCCTCACTaGTGGCTTCTTGAACCAAGG +
Preference number: 5 (lower is better)
Translates to: TFVVRSVQALDLLRLYQNPSRPH*WLLEPR
Trigger: CCTTGGTTCAAGAAGCCACAAGTGAGGCCTTGAAGG...ATTCTGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS TCA 90 bp ATAGCTTCCTTAGGTCTGTGCATTTTGACTTGGGCTTCGGCTAGATaGCACCACCCAGCTATGCAGACAGGGCTTTCCTTCAAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: IASLGLCILTWASAR*HHPAMQTGLSFKPS
Trigger: AGAAGGCTTGAAGGAAAGCCCTGTCTGCATAGCTGGGTGGTGTCATCTAGCCGAAGCCCAAGTCAAAATGCACAGACCTAAGGAAGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS TCA 90 bp ACAGCATCTGGGAGGGGCTTCTGTGACTCCAGGAGTGACATACACTaGACTTGTCTCAACAGTAAGATAACAGCTGGCTGGTCAGGGTTA +
Preference number: 5 (lower is better)
Translates to: TASGRGFCDSRSDIH*TCLNSKITAGWSGL
Trigger: TAACCCTGACCAGCCAGCTGTTATCTTACTGTTGAGACAAGTTCAGTGTATGTCACTCCTGGAGTCACAGAAGCCCCTCCCAGATGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS-3UTR CAA 90 bp ACCAAGCTAATCTCAAATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTAAGGACTCCCAGCAATaGCAGTCCTTTGGGTCTGCC +
Preference number: 5 (lower is better)
Translates to: TKLISNSEICMPLLLRAGKDSQQ*QSFGSA
Trigger: GGCAGACCCAAAGGACTGCAATTGCTGGGAGTCCTT...ACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATTTGAGATTAGCTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CAA 90 bp AAGAACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCAACGACTTCAAGGCTGTaGTGTAGCCACCTCTGCTTA +
Preference number: 5 (lower is better)
Translates to: KNLCGQVCASVRPPQALSTTSRL*CSHLCL
Trigger: TAAGCAGAGGTGGCTACACAACAGCCTTGAAGTCGT...TGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CAA 90 bp TTTATTCTTTTCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCGTGTGGCATCGCGCATaGCCAACCCTAGAGCACACA +
Preference number: 5 (lower is better)
Translates to: FILFKMGFHCVQMAGLEPVWHRA*PTLEHT
Trigger: TGTGTGCTCTAGGGTTGGCAATGCGCGATGCCACAC...GGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGAAAAGAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CAA 90 bp GAAAACTCAGGGCCCTGGAAGTCAGAATTAGCAAAAGAATCCAAAGGTCATTGCGTGTGGCATCGCGCATaGCCAACCCTAGAGCACACA +
Preference number: 5 (lower is better)
Translates to: ENSGPWKSELAKESKGHCVWHRA*PTLEHT
Trigger: TGTGTGCTCTAGGGTTGGCAATGCGCGATGCCACAC...GCAATGACCTTTGGATTCTTTTGCTAATTCTGACTTCCAGGGCCCTGAGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS TCA 90 bp CCAGCCCAGACAGCAGGGTCATCTGGAGAAAGGAAGGCTGCCTTCTaGATGGTCTTTAGAGCAGTATTGCTTTTATCTTCTGCTGTACTG +
Preference number: 5 (lower is better)
Translates to: PAQTAGSSGERKAAF*MVFRAVLLLSSAVL
Trigger: CAGTACAGCAGAAGATAAAAGCAATACTGCTCTAAAGACCATTCAGAAGGCAGCCTTCCTTTCTCCAGATGACCCTGCTGTCTGGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS-3UTR CAA 90 bp AAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCATTTCATTTCCACTAGCTaGCAACAATACTGGTGTCCC +
Preference number: 5 (lower is better)
Translates to: KMGFHCVQMAGLEPHADHFISTS*QQYWCP
Trigger: GGGACACCAGTATTGTTGCAAGCTAGTGGAAATGAA...ATGATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CAA 90 bp AAGAACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCATTAGGTCTGTGCATTTaGACTTGGGCTTCGGCTAGA +
Preference number: 5 (lower is better)
Translates to: KNLCGQVCASVRPPQALSLGLCI*TWASAR
Trigger: TCTAGCCGAAGCCCAAGTCAAAATGCACAGACCTAA...TGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CAA 90 bp TTCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATTTTCTCAAGTGCTCTTaGGAAACTCACTTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: FKMGFHCVQMAGLEPHADFLKCS*ETHFCL
Trigger: CAGGCAGAAGTGAGTTTCCAAAGAGCACTTGAGAAA...ATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CAA 90 bp TTTATTCTTTTCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCAAGGACTCCCAGCAATaGCAGTCCTTTGGGTCTGCC +
Preference number: 5 (lower is better)
Translates to: FILFKMGFHCVQMAGLEPKDSQQ*QSFGSA
Trigger: GGCAGACCCAAAGGACTGCAATTGCTGGGAGTCCTT...GGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGAAAAGAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS GCA 90 bp ATAATGCCTTCTTTCCATGATTCAAATCCAGAATATGAGCCACATTaGCAGCTACAGCACCTCCCTTTGCGCTCCGCTGTGTGTACTGAG +
Preference number: 5 (lower is better)
Translates to: IMPSFHDSNPEYEPH*QLQHLPLRSAVCTE
Trigger: CTCAGTACACACAGCGGAGCGCAAAGGGAGGTGCTGTAGCTGGCAATGTGGCTCATATTCTGGATTTGAATCATGGAAAGAAGGCATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS CCA 90 bp CCCAGACAGCAGGGTCATCTGGAGAAAGGAAGGCTGCCTTCTGAATaGTCTTTAGAGCAGTATTGCTTTTATCTTCTGCTGTACTGCTTC +
Preference number: 5 (lower is better)
Translates to: PRQQGHLEKGRLPSE*SLEQYCFYLLLYCF
Trigger: GAAGCAGTACAGCAGAAGATAAAAGCAATACTGCTCTAAAGACCATTCAGAAGGCAGCCTTCCTTTCTCCAGATGACCCTGCTGTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS-3UTR CAA 90 bp AATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTATTAAAGGCGTGCACCAGCTCATAAAGCTCTaGTCTGTCTGCTCCATCTTC +
Preference number: 5 (lower is better)
Translates to: NSEICMPLLLRAGIKGVHQLIKL*SVCSIF
Trigger: GAAGATGGAGCAGACAGACAAGAGCTTTATGAGCTG...GTGCACGCCTTTAATACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CAA 90 bp AAGAACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCATTCATTTCCACTAGCTaGCAACAATACTGGTGTCCC +
Preference number: 5 (lower is better)
Translates to: KNLCGQVCASVRPPQALSFISTS*QQYWCP
Trigger: GGGACACCAGTATTGTTGCAAGCTAGTGGAAATGAA...TGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CAA 90 bp CAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCATATGGTCTTCAGAGCTaGATTGCAAGAAAGAATAGC +
Preference number: 5 (lower is better)
Translates to: QDGISLCPDGWPGTPCGSYGLQS*IARKNS
Trigger: GCTATTCTTTCTTGCAATCAAGCTCTGAAGACCATA...TGATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CAA 90 bp CCCTTAATGCTGCCTGTAAGTCAGCCACTGCTTGAGAGTGTTGACCAGCTTTCATTTCTCAAGTGCTCTTaGGAAACTCACTTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: PLMLPVSQPLLESVDQLSFLKCS*ETHFCL
Trigger: CAGGCAGAAGTGAGTTTCCAAAGAGCACTTGAGAAA...TGAAAGCTGGTCAACACTCTCAAGCAGTGGCTGACTTACAGGCAGCATTAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225220.2
CDS-3UTR CAA 90 bp ACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCAGAATTATAACACTCCTAAGTaGGTCCACGCAGCAGCATTA +
Preference number: 5 (lower is better)
Translates to: TFVVRSVQALDLLRLYQNYNTPK*VHAAAL
Trigger: TAATGCTGCTGCGTGGACCAACTTAGGAGTGTTATA...ATTCTGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CAA 90 bp ACCAAGCTAATCTCAAATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTCCTGCAGTGCATAAATaGCTGACATCAGAAGGCAGC +
Preference number: 5 (lower is better)
Translates to: TKLISNSEICMPLLLRAGPAVHK*LTSEGS
Trigger: GCTGCCTTCTGATGTCAGCAATTTATGCACTGCAGG...ACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATTTGAGATTAGCTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS TCA 90 bp AACCTGATCAAGGGTACGAACTGCCTCCTCCGAAGATGCACCATCTaGGAGTTTAAGCAAAGCCTCTGCTTTCAGACGAAGACAAAGATT +
Preference number: 5 (lower is better)
Translates to: NLIKGTNCLLRRCTI*EFKQSLCFQTKTKI
Trigger: AATCTTTGTCTTCGTCTGAAAGCAGAGGCTTTGCTTAAACTCTCAGATGGTGCATCTTCGGAGGAGGCAGTTCGTACCCTTGATCAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
ENSMUST00000224790.2
CDS TCA 90 bp GACAGTGTGGCATCGCGCATTGCCAACCCTAGAGCACACAGTGCTTaGAGACTTTCTGCAGTTGGTTCCTTTAAAATAGAGCATTTGAAG +
Preference number: 5 (lower is better)
Translates to: DSVASRIANPRAHSA*RLSAVGSFKIEHLK
Trigger: CTTCAAATGCTCTATTTTAAAGGAACCAACTGCAGAAAGTCTTCAAGCACTGTGTGCTCTAGGGTTGGCAATGCGCGATGCCACACTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS TCA 90 bp GCAACAGCAGACCGCAATGCCAAGTACAAATCTACCCTCTTTGGCTaGGTGTTATTGAGTAAAGCCAGTTTATCATCTGCATGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: ATADRNAKYKSTLFG*VLLSKASLSSAWQA
Trigger: AGCCTGCCATGCAGATGATAAACTGGCTTTACTCAATAACACTCAGCCAAAGAGGGTAGATTTGTACTTGGCATTGCGGTCTGCTGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS GCA 90 bp AGCAACTTCAGCATCTTTCTCAAGTGCTCTTTGGAAACTCACTTCTaGCTGCACGTAGTCCTTCTTAGTAAAGTGAACCCGACCCTCAAG +
Preference number: 5 (lower is better)
Translates to: SNFSIFLKCSLETHF*LHVVLLSKVNPTLK
Trigger: CTTGAGGGTCGGGTTCACTTTACTAAGAAGGACTACGTGCAGGCAGAAGTGAGTTTCCAAAGAGCACTTGAGAAAGATGCTGAAGTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
ENSMUST00000225220.2
CDS CCA 90 bp ACGCCCTGTGCCGCAGGGATAGCATTCATCTCAAGGATGTTGTACTaGTACAGCTCTGTTTCTCTGTTGCTCTTGTCTTGTAATGTAGTA +
Preference number: 5 (lower is better)
Translates to: TPCAAGIAFISRMLY*YSSVSLLLLSCNVV
Trigger: TACTACATTACAAGACAAGAGCAACAGAGAAACAGAGCTGTACCAGTACAACATCCTTGAGATGAATGCTATCCCTGCGGCACAGGGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS-3UTR CAA 90 bp AGAATTAGCAAAAGAATCCAAAGGTCATTGCTTGAATTTGGGCTGGAGCAAGGGACTTCTCATACAAACTaGCTAGCCCCTGCCAGGCGA +
Preference number: 5 (lower is better)
Translates to: RISKRIQRSLLEFGLEQGTSHTN*LAPARR
Trigger: TCGCCTGGCAGGGGCTAGCAAGTTTGTATGAGAAGT...CCCTTGCTCCAGCCCAAATTCAAGCAATGACCTTTGGATTCTTTTGCTAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CAA 90 bp AATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTATTAAAGGCGTGCACGGCCTGGACCACTTTTaGAATTCATTTCCACTAGCT +
Preference number: 5 (lower is better)
Translates to: NSEICMPLLLRAGIKGVHGLDHF*NSFPLA
Trigger: AGCTAGTGGAAATGAATTCAAAAAGTGGTCCAGGCC...GTGCACGCCTTTAATACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CAA 90 bp ACCAAGCTAATCTCAAATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTCTGTTGGGATGCCACTaGGAGACTCTTTCTGTAACA +
Preference number: 5 (lower is better)
Translates to: TKLISNSEICMPLLLRAGLLGCH*ETLSVT
Trigger: TGTTACAGAAAGAGTCTCCAAGTGGCATCCCAACAG...ACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATTTGAGATTAGCTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS TCA 90 bp AAGACTTCTTGTCCTTCTTTTTGGCCGAGAAGGGCTCCTAAGACATaGACATGCACTTTAGATGGAGAAACAGGATGCAGACAGGTACAG +
Preference number: 5 (lower is better)
Translates to: KTSCPSFWPRRAPKT*TCTLDGETGCRQVQ
Trigger: CTGTACCTGTCTGCATCCTGTTTCTCCATCTAAAGTGCATGTTCATGTCTTAGGAGCCCTTCTCGGCCAAAAAGAAGGACAAGAAGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS TCA 90 bp TTGTCTTTGTACTGCCACACTGTGGCCCTGCAGTGCATAAATTGCTaGCATCAGAAGGCAGCTGTGATAATCGTTTCTGCGTTTGATATG +
Preference number: 5 (lower is better)
Translates to: LSLYCHTVALQCINC*HQKAAVIIVSAFDM
Trigger: CATATCAAACGCAGAAACGATTATCACAGCTGCCTTCTGATGTCAGCAATTTATGCACTGCAGGGCCACAGTGTGGCAGTACAAAGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS-3UTR CAA 90 bp TTTATTCTTTTCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCAGCTCATAAAGCTCTaGTCTGTCTGCTCCATCTTC +
Preference number: 5 (lower is better)
Translates to: FILFKMGFHCVQMAGLEPQLIKL*SVCSIF
Trigger: GAAGATGGAGCAGACAGACAAGAGCTTTATGAGCTG...GGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGAAAAGAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CAA 90 bp ACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCAGAATCCAGACTCAGCATCATaGTCATCTAATTCAAAAGCT +
Preference number: 5 (lower is better)
Translates to: TFVVRSVQALDLLRLYQNPDSAS*SSNSKA
Trigger: AGCTTTTGAATTAGATGACAATGATGCTGAGTCTGG...ATTCTGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CAA 90 bp AAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCATAATATGCATAACCTATaGCTCCTTCAGTATGCATAC +
Preference number: 5 (lower is better)
Translates to: KMGFHCVQMAGLEPHADHNMHNL*LLQYAY
Trigger: GTATGCATACTGAAGGAGCAATAGGTTATGCATATT...ATGATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CAA 90 bp AAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCATGCGGATCATTGCATCCATTTTCCCTaGTTTATATTCCACTATTGC +
Preference number: 5 (lower is better)
Translates to: KMGFHCVQMAGLEPHADHCIHFP*FIFHYC
Trigger: GCAATAGTGGAATATAAACAAGGGAAAATGGATGCA...ATGATCCGCATGGGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS GCA 90 bp AAGCCTCTGCTTTCAGACGAAGACAAAGATTCTTCTGATGAAGGTTaGCACCTGATGCACCAAAGTTATCTATGGTCTTCAGAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: KPLLSDEDKDSSDEG*HLMHQSYLWSSELL
Trigger: CAGAAGCTCTGAAGACCATAGATAACTTTGGTGCATCAGGTGGCAACCTTCATCAGAAGAATCTTTGTCTTCGTCTGAAAGCAGAGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224790.2
CDS CCA 90 bp CCTGGACCACTTTTTGAATTCATTTCCACTAGCTTGCAACAATACTaGTGTCCCTCACTGGTCAGGCTCCCTGAGTCAATTAAGTACAAA +
Preference number: 5 (lower is better)
Translates to: PGPLFEFISTSLQQY*CPSLVRLPESIKYK
Trigger: TTTGTACTTAATTGACTCAGGGAGCCTGACCAGTGAGGGACACCAGTATTGTTGCAAGCTAGTGGAAATGAATTCAAAAAGTGGTCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
ENSMUST00000224790.2
CDS-3UTR CAA 90 bp TTTATTCTTTTCAAGATGGGATTTCATTGTGTCCAGATGGCTGGCCTGGAACCCCACTGCTTGAGAGTGTaGACCAGCTTTCAAATGGTA +
Preference number: 5 (lower is better)
Translates to: FILFKMGFHCVQMAGLEPHCLRV*TSFQMV
Trigger: TACCATTTGAAAGCTGGTCAACACTCTCAAGCAGTG...GGGTTCCAGGCCAGCCATCTGGACACAATGAAATCCCATCTTGAAAAGAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CAA 90 bp AAGAACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCAGTTTCTCTGTTGCTCTaGTCTTGTAATGTAGTACAA +
Preference number: 5 (lower is better)
Translates to: KNLCGQVCASVRPPQALSVSLLL*SCNVVQ
Trigger: TTGTACTACATTACAAGACAAGAGCAACAGAGAAAC...TGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CAA 90 bp ACCTTTGTGGTCAGGTCTGTGCAAGCGTTAGACCTCCTCAGGCTCTATCAGAATTGCATCCATTTTCCCTaGTTTATATTCCACTATTGC +
Preference number: 5 (lower is better)
Translates to: TFVVRSVQALDLLRLYQNCIHFP*FIFHYC
Trigger: GCAATAGTGGAATATAAACAAGGGAAAATGGATGCA...ATTCTGATAGAGCCTGAGGAGGTCTAACGCTTGCACAGACCTGACCACAAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS TCA 90 bp CACCCAGCTATGCAGACAGGGCTTTCCTTCAAGCCTTCTGTTAGATaGCGAACAGCATCTTCATACTTCTTGTCTTGTAAAGCTATAATG +
Preference number: 5 (lower is better)
Translates to: HPAMQTGLSFKPSVR*RTASSYFLSCKAIM
Trigger: CATTATAGCTTTACAAGACAAGAAGTATGAAGATGCTGTTCGTCATCTAACAGAAGGCTTGAAGGAAAGCCCTGTCTGCATAGCTGGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS TCA 90 bp CAATCCAGCACAATAAATAAGATGGATCAAGGGACTGAGCCATTTTaGATGCTTCATGGGCTTGCTCGATGTTTTCAGTCGCGAGGTATA +
Preference number: 5 (lower is better)
Translates to: QSSTINKMDQGTEPF*MLHGLARCFQSRGI
Trigger: TATACCTCGCGACTGAAAACATCGAGCAAGCCCATGAAGCATTCAAAATGGCTCAGTCCCTTGATCCATCTTATTTATTGTGCTGGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS TCA 90 bp TTCTTTTATCACCATGAGTCTCTGCATTCCTCACCAACACATCAATaGGTTCAGGGTCATCTTTCGCATAGAGGTGTCTTAAGAGGTACC +
Preference number: 5 (lower is better)
Translates to: FFYHHESLHSSPTHQ*VQGHLSHRGVLRGT
Trigger: GGTACCTCTTAAGACACCTCTATGCGAAAGATGACCCTGAACTCATTGATGTGTTGGTGAGGAATGCAGAGACTCATGGTGATAAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
ENSMUST00000225147.2
CDS GCA 90 bp TCCAAGCTGGTAATGATATTCAGCAACTTCAGCATCTTTCTCAAGTaGTCTTTGGAAACTCACTTCTGCCTGCACGTAGTCCTTCTTAGT +
Preference number: 5 (lower is better)
Translates to: SKLVMIFSNFSIFLK*SLETHFCLHVVLLS
Trigger: ACTAAGAAGGACTACGTGCAGGCAGAAGTGAGTTTCCAAAGAGCACTTGAGAAAGATGCTGAAGTTGCTGAATATCATTACCAGCTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
ENSMUST00000225220.2
CDS-3UTR CAA 90 bp AGAATTAGCAAAAGAATCCAAAGGTCATTGCTTGAATTTGGGCTGGAGCAAGGGTTTCTCAAGTGCTCTTaGGAAACTCACTTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: RISKRIQRSLLEFGLEQGFLKCS*ETHFCL
Trigger: CAGGCAGAAGTGAGTTTCCAAAGAGCACTTGAGAAA...CCCTTGCTCCAGCCCAAATTCAAGCAATGACCTTTGGATTCTTTTGCTAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CAA 90 bp AGAATTAGCAAAAGAATCCAAAGGTCATTGCTTGAATTTGGGCTGGAGCAAGGGCACTGCTTGAGAGTGTaGACCAGCTTTCAAATGGTA +
Preference number: 5 (lower is better)
Translates to: RISKRIQRSLLEFGLEQGHCLRV*TSFQMV
Trigger: TACCATTTGAAAGCTGGTCAACACTCTCAAGCAGTG...CCCTTGCTCCAGCCCAAATTCAAGCAATGACCTTTGGATTCTTTTGCTAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CAA 90 bp GCACCACCACACCTAGCTGATACAACTATAACTTTAAAATACGCTGTTCTGGTGTATAACACTCCTAAGTaGGTCCACGCAGCAGCATTA +
Preference number: 5 (lower is better)
Translates to: APPHLADTTITLKYAVLVYNTPK*VHAAAL
Trigger: TAATGCTGCTGCGTGGACCAACTTAGGAGTGTTATA...CACCAGAACAGCGTATTTTAAAGTTATAGTTGTATCAGCTAGGTGTGGTGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CAA 90 bp GAAAACTCAGGGCCCTGGAAGTCAGAATTAGCAAAAGAATCCAAAGGTCATTGCTTCATCTCAAGGATGTaGTACTGGTACAGCTCTGTT +
Preference number: 5 (lower is better)
Translates to: ENSGPWKSELAKESKGHCFISRM*YWYSSV
Trigger: AACAGAGCTGTACCAGTACAACATCCTTGAGATGAA...GCAATGACCTTTGGATTCTTTTGCTAATTCTGACTTCCAGGGCCCTGAGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS GCA 90 bp TCTGAATGGTCTTTAGAGCAGTATTGCTTTTATCTTCTGCTGTACTaGTTCCCATGGCCAACTGGTTCACTGCAGTATACAATAATGCCT +
Preference number: 5 (lower is better)
Translates to: SEWSLEQYCFYLLLY*FPWPTGSLQYTIMP
Trigger: AGGCATTATTGTATACTGCAGTGAACCAGTTGGCCATGGGAAGCAGTACAGCAGAAGATAAAAGCAATACTGCTCTAAAGACCATTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS CCA 90 bp TTGAATTCATTTCCACTAGCTTGCAACAATACTGGTGTCCCTCACTaGTCAGGCTCCCTGAGTCAATTAAGTACAAACAGATCACTTCTA +
Preference number: 5 (lower is better)
Translates to: LNSFPLACNNTGVPH*SGSLSQLSTNRSLL
Trigger: TAGAAGTGATCTGTTTGTACTTAATTGACTCAGGGAGCCTGACCAGTGAGGGACACCAGTATTGTTGCAAGCTAGTGGAAATGAATTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
ENSMUST00000224790.2
CDS-3UTR CAA 90 bp GAAAACTCAGGGCCCTGGAAGTCAGAATTAGCAAAAGAATCCAAAGGTCATTGCTATGGTCTTCAGAGCTaGATTGCAAGAAAGAATAGC +
Preference number: 5 (lower is better)
Translates to: ENSGPWKSELAKESKGHCYGLQS*IARKNS
Trigger: GCTATTCTTTCTTGCAATCAAGCTCTGAAGACCATA...GCAATGACCTTTGGATTCTTTTGCTAATTCTGACTTCCAGGGCCCTGAGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CAA 90 bp ACCAAGCTAATCTCAAATTCAGAGATTTGCATGCCTCTGCTCCTACGTGCTGGTAATATGCATAACCTATaGCTCCTTCAGTATGCATAC +
Preference number: 5 (lower is better)
Translates to: TKLISNSEICMPLLLRAGNMHNL*LLQYAY
Trigger: GTATGCATACTGAAGGAGCAATAGGTTATGCATATT...ACCAGCACGTAGGAGCAGAGGCATGCAAATCTCTGAATTTGAGATTAGCTTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CAA 90 bp ACAACTATAACTTTAAAATACGCTGTTCTGGTGAGAACTCTTGATTCATTGCCTCATTCAGTGCTGCTTTaGACAGTGTGGCATCGCGCA +
Preference number: 5 (lower is better)
Translates to: TTITLKYAVLVRTLDSLPHSVLL*TVWHRA
Trigger: TGCGCGATGCCACACTGTCAAAAGCAGCACTGAATG...AGGCAATGAATCAAGAGTTCTCACCAGAACAGCGTATTTTAAAGTTATAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS CCA 90 bp TCTTTAGAGCAGTATTGCTTTTATCTTCTGCTGTACTGCTTCCCATaGCCAACTGGTTCACTGCAGTATACAATAATGCCTTCTTTCCAT +
Preference number: 5 (lower is better)
Translates to: SLEQYCFYLLLYCFP*PTGSLQYTIMPSFH
Trigger: ATGGAAAGAAGGCATTATTGTATACTGCAGTGAACCAGTTGGCCATGGGAAGCAGTACAGCAGAAGATAAAAGCAATACTGCTCTAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS-3UTR CAA 90 bp GAAAACTCAGGGCCCTGGAAGTCAGAATTAGCAAAAGAATCCAAAGGTCATTGCGTCTTTAGAGCAGTATaGCTTTTATCTTCTGCTGTA +
Preference number: 5 (lower is better)
Translates to: ENSGPWKSELAKESKGHCVFRAV*LLSSAV
Trigger: TACAGCAGAAGATAAAAGCAATACTGCTCTAAAGAC...GCAATGACCTTTGGATTCTTTTGCTAATTCTGACTTCCAGGGCCCTGAGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000224386.2
CDS-3UTR CAA 90 bp CACCTAGCTGATACAACTATAACTTTAAAATACGCTGTTCTGGTGAGAACTCTTGGCCTGGACCACTTTTaGAATTCATTTCCACTAGCT +
Preference number: 5 (lower is better)
Translates to: HLADTTITLKYAVLVRTLGLDHF*NSFPLA
Trigger: AGCTAGTGGAAATGAATTCAAAAAGTGGTCCAGGCC...AAGAGTTCTCACCAGAACAGCGTATTTTAAAGTTATAGTTGTATCAGCTAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CAA 90 bp GCACCACCACACCTAGCTGATACAACTATAACTTTAAAATACGCTGTTCTGGTGGTTTCTCTGTTGCTCTaGTCTTGTAATGTAGTACAA +
Preference number: 5 (lower is better)
Translates to: APPHLADTTITLKYAVLVVSLLL*SCNVVQ
Trigger: TTGTACTACATTACAAGACAAGAGCAACAGAGAAAC...CACCAGAACAGCGTATTTTAAAGTTATAGTTGTATCAGCTAGGTGTGGTGGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CAA 90 bp CACCTAGCTGATACAACTATAACTTTAAAATACGCTGTTCTGGTGAGAACTCTTTTCATCTCAAGGATGTaGTACTGGTACAGCTCTGTT +
Preference number: 5 (lower is better)
Translates to: HLADTTITLKYAVLVRTLFISRM*YWYSSV
Trigger: AACAGAGCTGTACCAGTACAACATCCTTGAGATGAA...AAGAGTTCTCACCAGAACAGCGTATTTTAAAGTTATAGTTGTATCAGCTAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CAA 90 bp ACTATAACTTTAAAATACGCTGTTCTGGTGAGAACTCTTGATTCATTGCCTCATATTCCTGTAAAGTACTaGGTGATCTTCACTGGGAAT +
Preference number: 5 (lower is better)
Translates to: TITLKYAVLVRTLDSLPHIPVKY*VIFTGN
Trigger: ATTCCCAGTGAAGATCACCAAGTACTTTACAGGAAT...ATGAGGCAATGAATCAAGAGTTCTCACCAGAACAGCGTATTTTAAAGTTATAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CAA 90 bp ACTATAACTTTAAAATACGCTGTTCTGGTGAGAACTCTTGATTCATTGCCTCATCCAGACTCAGCATCATaGTCATCTAATTCAAAAGCT +
Preference number: 5 (lower is better)
Translates to: TITLKYAVLVRTLDSLPHPDSAS*SSNSKA
Trigger: AGCTTTTGAATTAGATGACAATGATGCTGAGTCTGG...ATGAGGCAATGAATCAAGAGTTCTCACCAGAACAGCGTATTTTAAAGTTATAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS-3UTR CAA 90 bp CACCTAGCTGATACAACTATAACTTTAAAATACGCTGTTCTGGTGAGAACTCTTGTCTTTAGAGCAGTATaGCTTTTATCTTCTGCTGTA +
Preference number: 5 (lower is better)
Translates to: HLADTTITLKYAVLVRTLVFRAV*LLSSAV
Trigger: TACAGCAGAAGATAAAAGCAATACTGCTCTAAAGAC...AAGAGTTCTCACCAGAACAGCGTATTTTAAAGTTATAGTTGTATCAGCTAGGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091466.4
CDS GCA 72 bp CCCACGAGCTTCCAAAGGCAAGACACATCAGCTCGATaGTGCAGGGCCCGGGTGAAATATCCCAGCGCTTGT +
Preference number: 6 (lower is better)
Translates to: PTSFQRQDTSAR*CRARVKYPSAC
Trigger: ACAAGCGCTGGGATATTTCACCCGGGCCCTGCAGCATCGAGCTGATGTGTCTTGCCTTTGGAAGCTCGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS TCA 72 bp GGCAAGACACATCAGCTCGATGCTGCAGGGCCCGGGTaGAATATCCCAGCGCTTGTTCCACATAGTCCACAG +
Preference number: 6 (lower is better)
Translates to: GKTHQLDAAGPG*NIPALVPHSPQ
Trigger: CTGTGGACTATGTGGAACAAGCGCTGGGATATTTCACCCGGGCCCTGCAGCATCGAGCTGATGTGTCTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS GCA 72 bp ACGAGCTTCCAAAGGCAAGACACATCAGCTCGATGCTaGAGGGCCCGGGTGAAATATCCCAGCGCTTGTTCC +
Preference number: 6 (lower is better)
Translates to: TSFQRQDTSARC*RARVKYPSACS
Trigger: GGAACAAGCGCTGGGATATTTCACCCGGGCCCTGCAGCATCGAGCTGATGTGTCTTGCCTTTGGAAGCTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS CAA 72 bp CTTGTCCACAGCGCCTGTGTTCAGACAGGCGAGGCCTaGGAGAACCAGCAGTCCTGGGGTATTATCTACGTC +
Preference number: 6 (lower is better)
Translates to: LVHSACVQTGEA*ENQQSWGIIYV
Trigger: GACGTAGATAATACCCCAGGACTGCTGGTTCTCCAAGGCCTCGCCTGTCTGAACACAGGCGCTGTGGACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
ENSMUST00000224790.2
CDS CCA 72 bp TTGTCCACAGCGCCTGTGTTCAGACAGGCGAGGCCTTaGAGAACCAGCAGTCCTGGGGTATTATCTACGTCA +
Preference number: 6 (lower is better)
Translates to: LSTAPVFRQARP*RTSSPGVLSTS
Trigger: TGACGTAGATAATACCCCAGGACTGCTGGTTCTCCAAGGCCTCGCCTGTCTGAACACAGGCGCTGTGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
ENSMUST00000224790.2
CDS GCA 72 bp ATGGTACAGTCCTCTCCTCAGCCACGCCCACTTAGCTaGTCCAGCACTTGCCTTCTGAGTTACTGCTGTCAA +
Preference number: 6 (lower is better)
Translates to: MVQSSPQPRPLS*SSTCLLSYCCQ
Trigger: TTGACAGCAGTAACTCAGAAGGCAAGTGCTGGAGCAGCTAAGTGGGCGTGGCTGAGGAGAGGACTGTACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS CCA 72 bp CGAGCGGCTGATACAATTGAGCTGGGGTATCCAGTCTaGTACACGATTCTCTCCAAAAGCCGCCGTGTCTCT +
Preference number: 6 (lower is better)
Translates to: RAADTIELGYPV*YTILSKSRRVS
Trigger: AGAGACACGGCGGCTTTTGGAGAGAATCGTGTACCAGACTGGATACCCCAGCTCAATTGTATCAGCCGCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
ENSMUST00000225147.2
CDS CAA 72 bp GAGCTTCCCACTCCAGTTGCCCTGTTGGGATGCCACTaGGAGACTCTTTCTGTAACACATCTCTGCAGCACC +
Preference number: 6 (lower is better)
Translates to: ELPTPVALLGCH*ETLSVTHLCST
Trigger: GGTGCTGCAGAGATGTGTTACAGAAAGAGTCTCCAAGTGGCATCCCAACAGGGCAACTGGAGTGGGAAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS CAA 72 bp GCTAGCTTCAACAGACTCGAGAGCTTCCCACTCCAGTaGCCCTGTTGGGATGCCACTTGGAGACTCTTTCTG +
Preference number: 6 (lower is better)
Translates to: ASFNRLESFPLQ*PCWDATWRLFL
Trigger: CAGAAAGAGTCTCCAAGTGGCATCCCAACAGGGCAACTGGAGTGGGAAGCTCTCGAGTCTGTTGAAGCTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS GCA 72 bp ACTCGAGAGCTTCCCACTCCAGTTGCCCTGTTGGGATaGCACTTGGAGACTCTTTCTGTAACACATCTCTGC +
Preference number: 6 (lower is better)
Translates to: TRELPTPVALLG*HLETLSVTHLC
Trigger: GCAGAGATGTGTTACAGAAAGAGTCTCCAAGTGGCATCCCAACAGGGCAACTGGAGTGGGAAGCTCTCGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS CCA 72 bp GTTCAGACAGGCGAGGCCTTGGAGAACCAGCAGTCCTaGGGTATTATCTACGTCAGAAACCTGATCAAGGGT +
Preference number: 6 (lower is better)
Translates to: VQTGEALENQQS*GIIYVRNLIKG
Trigger: ACCCTTGATCAGGTTTCTGACGTAGATAATACCCCAGGACTGCTGGTTCTCCAAGGCCTCGCCTGTCTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
ENSMUST00000224790.2
CDS CCA 72 bp TGGTCTTCAGCAGAATGTAACAGTGTAGTTGCCCTCTaGTACGCCTCGGCGGCTTCCTTTTTCAGCTGCAGA +
Preference number: 6 (lower is better)
Translates to: WSSAECNSVVAL*YASAASFFSCR
Trigger: TCTGCAGCTGAAAAAGGAAGCCGCCGAGGCGTACCAGAGGGCAACTACACTGTTACATTCTGCTGAAGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS CAA 72 bp AGCAGGGTTACTGTGCACAGCCTTGGCCACTTGTCTTaGTACTGCCACACTGTGGCCCTGCAGTGCATAAAT +
Preference number: 6 (lower is better)
Translates to: SRVTVHSLGHLS*YCHTVALQCIN
Trigger: ATTTATGCACTGCAGGGCCACAGTGTGGCAGTACAAAGACAAGTGGCCAAGGCTGTGCACAGTAACCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS CAA 72 bp GAATATGAGCCACATTGCCAGCTACAGCACCTCCCTTaGCGCTCCGCTGTGTGTACTGAGCAACAATTCGAG +
Preference number: 6 (lower is better)
Translates to: EYEPHCQLQHLP*RSAVCTEQQFE
Trigger: CTCGAATTGTTGCTCAGTACACACAGCGGAGCGCAAAGGGAGGTGCTGTAGCTGGCAATGTGGCTCATATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS TCA 72 bp GCTACAGCACCTCCCTTTGCGCTCCGCTGTGTGTACTaGGCAACAATTCGAGATAGCAAAGACCAAAGAGCA +
Preference number: 6 (lower is better)
Translates to: ATAPPFALRCVY*ATIRDSKDQRA
Trigger: TGCTCTTTGGTCTTTGCTATCTCGAATTGTTGCTCAGTACACACAGCGGAGCGCAAAGGGAGGTGCTGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS TCA 72 bp GGGAGGGGCTTCTGTGACTCCAGGAGTGACATACACTaGACTTGTCTCAACAGTAAGATAACAGCTGGCTGG +
Preference number: 6 (lower is better)
Translates to: GRGFCDSRSDIH*TCLNSKITAGW
Trigger: CCAGCCAGCTGTTATCTTACTGTTGAGACAAGTTCAGTGTATGTCACTCCTGGAGTCACAGAAGCCCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS TCA 72 bp AAAGCCGCCGTGTCTCTCTTGCTCCCATCTTACGGTTaGACTGTAACAATGCTTGCAAGAAGACAGCCAGCG +
Preference number: 6 (lower is better)
Translates to: KAAVSLLLPSYG*TVTMLARRQPA
Trigger: CGCTGGCTGTCTTCTTGCAAGCATTGTTACAGTTCAACCGTAAGATGGGAGCAAGAGAGACACGGCGGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS GCA 72 bp AATATGAGCCACATTGCCAGCTACAGCACCTCCCTTTaGGCTCCGCTGTGTGTACTGAGCAACAATTCGAGA +
Preference number: 6 (lower is better)
Translates to: NMSHIASYSTSL*APLCVLSNNSR
Trigger: TCTCGAATTGTTGCTCAGTACACACAGCGGAGCGCAAAGGGAGGTGCTGTAGCTGGCAATGTGGCTCATATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS CAA 72 bp CAACAGACTCGAGAGCTTCCCACTCCAGTTGCCCTGTaGGGATGCCACTTGGAGACTCTTTCTGTAACACAT +
Preference number: 6 (lower is better)
Translates to: QQTRELPTPVAL*GCHLETLSVTH
Trigger: ATGTGTTACAGAAAGAGTCTCCAAGTGGCATCCCAACAGGGCAACTGGAGTGGGAAGCTCTCGAGTCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS CAA 90 bp TCAGCAACTCATTCAGTGCTGCTTTTGACAGTGTGGCATCGCGCATaGCCAACCCTAGAGCACACAGTGCTTGAAGACTTTCTGCAGTTG +
Preference number: 6 (lower is better)
Translates to: SATHSVLLLTVWHRA*PTLEHTVLEDFLQL
Trigger: CAACTGCAGAAAGTCTTCAAGCACTGTGTGCTCTAGGGTTGGCAATGCGCGATGCCACACTGTCAAAAGCAGCACTGAATGAGTTGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS CAA 90 bp ATTCTCTCCAAAAGCCGCCGTGTCTCTCTTGCTCCCATCTTACGGTaGAACTGTAACAATGCTTGCAAGAAGACAGCCAGCGGGCTAAAG +
Preference number: 6 (lower is better)
Translates to: ILSKSRRVSLAPILR*NCNNACKKTASGLK
Trigger: CTTTAGCCCGCTGGCTGTCTTCTTGCAAGCATTGTTACAGTTCAACCGTAAGATGGGAGCAAGAGAGACACGGCGGCTTTTGGAGAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS TCA 72 bp AAGGGTACGAACTGCCTCCTCCGAAGATGCACCATCTaGGAGTTTAAGCAAAGCCTCTGCTTTCAGACGAAG +
Preference number: 6 (lower is better)
Translates to: KGTNCLLRRCTI*EFKQSLCFQTK
Trigger: CTTCGTCTGAAAGCAGAGGCTTTGCTTAAACTCTCAGATGGTGCATCTTCGGAGGAGGCAGTTCGTACCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
ENSMUST00000224790.2
CDS GCA 72 bp GGCCTGGACCACTTTTTGAATTCATTTCCACTAGCTTaGAACAATACTGGTGTCCCTCACTGGTCAGGCTCC +
Preference number: 6 (lower is better)
Translates to: GLDHFLNSFPLA*NNTGVPHWSGS
Trigger: GGAGCCTGACCAGTGAGGGACACCAGTATTGTTGCAAGCTAGTGGAAATGAATTCAAAAAGTGGTCCAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
ENSMUST00000224790.2
CDS GCA 72 bp TCTTTCCATGATTCAAATCCAGAATATGAGCCACATTaGCAGCTACAGCACCTCCCTTTGCGCTCCGCTGTG +
Preference number: 6 (lower is better)
Translates to: SFHDSNPEYEPH*QLQHLPLRSAV
Trigger: CACAGCGGAGCGCAAAGGGAGGTGCTGTAGCTGGCAATGTGGCTCATATTCTGGATTTGAATCATGGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS GCA 72 bp GGATGCCACTTGGAGACTCTTTCTGTAACACATCTCTaGAGCACCCATCATTCCTTGGGACTGATACACCTG +
Preference number: 6 (lower is better)
Translates to: GCHLETLSVTHL*STHHSLGLIHL
Trigger: CAGGTGTATCAGTCCCAAGGAATGATGGGTGCTGCAGAGATGTGTTACAGAAAGAGTCTCCAAGTGGCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS CAA 72 bp CATTCAGTGCTGCTTTTGACAGTGTGGCATCGCGCATaGCCAACCCTAGAGCACACAGTGCTTGAAGACTTT +
Preference number: 6 (lower is better)
Translates to: HSVLLLTVWHRA*PTLEHTVLEDF
Trigger: AAAGTCTTCAAGCACTGTGTGCTCTAGGGTTGGCAATGCGCGATGCCACACTGTCAAAAGCAGCACTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS CAA 72 bp AAAAGCCGCCGTGTCTCTCTTGCTCCCATCTTACGGTaGAACTGTAACAATGCTTGCAAGAAGACAGCCAGC +
Preference number: 6 (lower is better)
Translates to: KSRRVSLAPILR*NCNNACKKTAS
Trigger: GCTGGCTGTCTTCTTGCAAGCATTGTTACAGTTCAACCGTAAGATGGGAGCAAGAGAGACACGGCGGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS CAA 90 bp TCAAATCCAGAATATGAGCCACATTGCCAGCTACAGCACCTCCCTTaGCGCTCCGCTGTGTGTACTGAGCAACAATTCGAGATAGCAAAG +
Preference number: 6 (lower is better)
Translates to: SNPEYEPHCQLQHLP*RSAVCTEQQFEIAK
Trigger: CTTTGCTATCTCGAATTGTTGCTCAGTACACACAGCGGAGCGCAAAGGGAGGTGCTGTAGCTGGCAATGTGGCTCATATTCTGGATTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS GCA 72 bp TCTGCTCCATCTTCCTGCCGTGTCTTTATCAATCTATaGCATGTCCGAGCCACCTCTAGGTGTTTCTTTTCC +
Preference number: 6 (lower is better)
Translates to: SAPSSCRVFINL*HVRATSRCFFS
Trigger: GGAAAAGAAACACCTAGAGGTGGCTCGGACATGGCATAGATTGATAAAGACACGGCAGGAAGATGGAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS GCA 72 bp CTTGCTCCCATCTTACGGTTGAACTGTAACAATGCTTaGAAGAAGACAGCCAGCGGGCTAAAGCAAACCTTC +
Preference number: 6 (lower is better)
Translates to: LAPILRLNCNNA*KKTASGLKQTF
Trigger: GAAGGTTTGCTTTAGCCCGCTGGCTGTCTTCTTGCAAGCATTGTTACAGTTCAACCGTAAGATGGGAGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS CAA 90 bp CAGAGAACGCCCTGTGCCGCAGGGATAGCATTCATCTCAAGGATGTaGTACTGGTACAGCTCTGTTTCTCTGTTGCTCTTGTCTTGTAAT +
Preference number: 6 (lower is better)
Translates to: QRTPCAAGIAFISRM*YWYSSVSLLLLSCN
Trigger: ATTACAAGACAAGAGCAACAGAGAAACAGAGCTGTACCAGTACAACATCCTTGAGATGAATGCTATCCCTGCGGCACAGGGCGTTCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS CAA 90 bp TGGGCTTGCTCGATGTTTTCAGTCGCGAGGTATAACACTCCTAAGTaGGTCCACGCAGCAGCATTAATTTGTTCTGCCTGGATTGATTTG +
Preference number: 6 (lower is better)
Translates to: WACSMFSVARYNTPK*VHAAALICSAWIDL
Trigger: CAAATCAATCCAGGCAGAACAAATTAATGCTGCTGCGTGGACCAACTTAGGAGTGTTATACCTCGCGACTGAAAACATCGAGCAAGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS CAA 72 bp TCGATGTTTTCAGTCGCGAGGTATAACACTCCTAAGTaGGTCCACGCAGCAGCATTAATTTGTTCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: SMFSVARYNTPK*VHAAALICSAW
Trigger: CCAGGCAGAACAAATTAATGCTGCTGCGTGGACCAACTTAGGAGTGTTATACCTCGCGACTGAAAACATCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS CAA 72 bp TTTGTACTGCCACACTGTGGCCCTGCAGTGCATAAATaGCTGACATCAGAAGGCAGCTGTGATAATCGTTTC +
Preference number: 6 (lower is better)
Translates to: FVLPHCGPAVHK*LTSEGSCDNRF
Trigger: GAAACGATTATCACAGCTGCCTTCTGATGTCAGCAATTTATGCACTGCAGGGCCACAGTGTGGCAGTACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS CAA 90 bp CTCAGCCAGCAACTGACTCAATTTTCTCCACAGCTCATAAAGCTCTaGTCTGTCTGCTCCATCTTCCTGCCGTGTCTTTATCAATCTATG +
Preference number: 6 (lower is better)
Translates to: LSQQLTQFSPQLIKL*SVCSIFLPCLYQSM
Trigger: CATAGATTGATAAAGACACGGCAGGAAGATGGAGCAGACAGACAAGAGCTTTATGAGCTGTGGAGAAAATTGAGTCAGTTGCTGGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
ENSMUST00000224790.2
CDS TCA 72 bp TGTCCTTCTTTTTGGCCGAGAAGGGCTCCTAAGACATaGACATGCACTTTAGATGGAGAAACAGGATGCAGA +
Preference number: 6 (lower is better)
Translates to: CPSFWPRRAPKT*TCTLDGETGCR
Trigger: TCTGCATCCTGTTTCTCCATCTAAAGTGCATGTTCATGTCTTAGGAGCCCTTCTCGGCCAAAAAGAAGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS TCA 72 bp CACCATGAGTCTCTGCATTCCTCACCAACACATCAATaGGTTCAGGGTCATCTTTCGCATAGAGGTGTCTTA +
Preference number: 6 (lower is better)
Translates to: HHESLHSSPTHQ*VQGHLSHRGVL
Trigger: TAAGACACCTCTATGCGAAAGATGACCCTGAACTCATTGATGTGTTGGTGAGGAATGCAGAGACTCATGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
ENSMUST00000225147.2
CDS CCA 72 bp TTTCCACTAGCTTGCAACAATACTGGTGTCCCTCACTaGTCAGGCTCCCTGAGTCAATTAAGTACAAACAGA +
Preference number: 6 (lower is better)
Translates to: FPLACNNTGVPH*SGSLSQLSTNR
Trigger: TCTGTTTGTACTTAATTGACTCAGGGAGCCTGACCAGTGAGGGACACCAGTATTGTTGCAAGCTAGTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
ENSMUST00000224790.2
CDS TCA 72 bp ACAGCAGGGTCATCTGGAGAAAGGAAGGCTGCCTTCTaGATGGTCTTTAGAGCAGTATTGCTTTTATCTTCT +
Preference number: 6 (lower is better)
Translates to: TAGSSGERKAAF*MVFRAVLLLSS
Trigger: AGAAGATAAAAGCAATACTGCTCTAAAGACCATTCAGAAGGCAGCCTTCCTTTCTCCAGATGACCCTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS CCA 72 bp CTTTTTGAATTCATTTCCACTAGCTTGCAACAATACTaGTGTCCCTCACTGGTCAGGCTCCCTGAGTCAATT +
Preference number: 6 (lower is better)
Translates to: LFEFISTSLQQY*CPSLVRLPESI
Trigger: AATTGACTCAGGGAGCCTGACCAGTGAGGGACACCAGTATTGTTGCAAGCTAGTGGAAATGAATTCAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
ENSMUST00000224790.2
CDS CCA 72 bp GATGAAGGTTGCCACCTGATGCACCAAAGTTATCTATaGTCTTCAGAGCTTCTGTTAGATGACGAACAGCAT +
Preference number: 6 (lower is better)
Translates to: DEGCHLMHQSYL*SSELLLDDEQH
Trigger: ATGCTGTTCGTCATCTAACAGAAGCTCTGAAGACCATAGATAACTTTGGTGCATCAGGTGGCAACCTTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224790.2
CDS TCA 72 bp CCTGATGCACCAAAGTTATCTATGGTCTTCAGAGCTTaGTTGCAAGAAAGAATAGCTTCCTTAGGTCTGTGC +
Preference number: 6 (lower is better)
Translates to: PDAPKLSMVFRA*LQERIASLGLC
Trigger: GCACAGACCTAAGGAAGCTATTCTTTCTTGCAATCAAGCTCTGAAGACCATAGATAACTTTGGTGCATCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS TCA 72 bp ACGAAGACAAAGATTCTTCTGATGAAGGTTGCCACCTaGTGCACCAAAGTTATCTATGGTCTTCAGAGCTTG +
Preference number: 6 (lower is better)
Translates to: TKTKILLMKVAT*CTKVIYGLQSL
Trigger: CAAGCTCTGAAGACCATAGATAACTTTGGTGCATCAGGTGGCAACCTTCATCAGAAGAATCTTTGTCTTCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS TCA 72 bp GACCGCAATGCCAAGTACAAATCTACCCTCTTTGGCTaGGTGTTATTGAGTAAAGCCAGTTTATCATCTGCA +
Preference number: 6 (lower is better)
Translates to: DRNAKYKSTLFG*VLLSKASLSSA
Trigger: TGCAGATGATAAACTGGCTTTACTCAATAACACTCAGCCAAAGAGGGTAGATTTGTACTTGGCATTGCGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS TCA 72 bp CAGCTTCAGATGTTTTTCCTGTGTCAATCAGACCAGTaGCAACTTGTGAGAAAGACCACTTTTCAAGCGACT +
Preference number: 6 (lower is better)
Translates to: QLQMFFLCQSDQ*QLVRKTTFQAT
Trigger: AGTCGCTTGAAAAGTGGTCTTTCTCACAAGTTGTCACTGGTCTGATTGACACAGGAAAAACATCTGAAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS TCA 72 bp ACGAAGACAAAGATTCTTCTGATGAAGGTTGCCACCTaGTGCACCAAAGTTATCTATGGTCTTCAGAGCTTC +
Preference number: 6 (lower is better)
Translates to: TKTKILLMKVAT*CTKVIYGLQSF
Trigger: GAAGCTCTGAAGACCATAGATAACTTTGGTGCATCAGGTGGCAACCTTCATCAGAAGAATCTTTGTCTTCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224790.2
CDS GCA 72 bp CTGAATTCTTTCTACATATTTACAGAGAACGCCCTGTaGCGCAGGGATAGCATTCATCTCAAGGATGTTGTA +
Preference number: 6 (lower is better)
Translates to: LNSFYIFTENAL*RRDSIHLKDVV
Trigger: TACAACATCCTTGAGATGAATGCTATCCCTGCGGCACAGGGCGTTCTCTGTAAATATGTAGAAAGAATTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS GCA 72 bp GGCTGCATCCATTTTCCCTTGTTTATATTCCACTATTaGCATAGCTGTCAAGATGTGAGCTTTGTCTTGCTC +
Preference number: 6 (lower is better)
Translates to: GCIHFPLFIFHY*HSCQDVSFVLL
Trigger: GAGCAAGACAAAGCTCACATCTTGACAGCTATGGCAATAGTGGAATATAAACAAGGGAAAATGGATGCAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS GCA 72 bp TCTTTAGAGCAGTATTGCTTTTATCTTCTGCTGTACTaGTTCCCATGGCCAACTGGTTCACTGCAGTATACA +
Preference number: 6 (lower is better)
Translates to: SLEQYCFYLLLY*FPWPTGSLQYT
Trigger: TGTATACTGCAGTGAACCAGTTGGCCATGGGAAGCAGTACAGCAGAAGATAAAAGCAATACTGCTCTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS TCA 72 bp ATGCAGACAGGGCTTTCCTTCAAGCCTTCTGTTAGATaGCGAACAGCATCTTCATACTTCTTGTCTTGTAAA +
Preference number: 6 (lower is better)
Translates to: MQTGLSFKPSVR*RTASSYFLSCK
Trigger: TTTACAAGACAAGAAGTATGAAGATGCTGTTCGTCATCTAACAGAAGGCTTGAAGGAAAGCCCTGTCTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS GCA 72 bp CTTTCAGACGAAGACAAAGATTCTTCTGATGAAGGTTaGCACCTGATGCACCAAAGTTATCTATGGTCTTCA +
Preference number: 6 (lower is better)
Translates to: LSDEDKDSSDEG*HLMHQSYLWSS
Trigger: TGAAGACCATAGATAACTTTGGTGCATCAGGTGGCAACCTTCATCAGAAGAATCTTTGTCTTCGTCTGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
ENSMUST00000224790.2
CDS TCA 72 bp TGTTTATATTCCACTATTGCCATAGCTGTCAAGATGTaGGCTTTGTCTTGCTCTGATTTACAAACTGCCAAG +
Preference number: 6 (lower is better)
Translates to: CLYSTIAIAVKM*ALSCSDLQTAK
Trigger: CTTGGCAGTTTGTAAATCAGAGCAAGACAAAGCTCACATCTTGACAGCTATGGCAATAGTGGAATATAAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS CAA 72 bp TCAAGGATGTTGTACTGGTACAGCTCTGTTTCTCTGTaGCTCTTGTCTTGTAATGTAGTACAAACCCAATAT +
Preference number: 6 (lower is better)
Translates to: SRMLYWYSSVSL*LLSCNVVQTQY
Trigger: ATATTGGGTTTGTACTACATTACAAGACAAGAGCAACAGAGAAACAGAGCTGTACCAGTACAACATCCTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2
CDS TCA 72 bp CCAAAGTTATCTATGGTCTTCAGAGCTTCTGTTAGATaGCGAACAGCATCTTCATACTTCTTGTCTTGTAAA +
Preference number: 6 (lower is better)
Translates to: PKLSMVFRASVR*RTASSYFLSCK
Trigger: TTTACAAGACAAGAAGTATGAAGATGCTGTTCGTCATCTAACAGAAGCTCTGAAGACCATAGATAACTTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224790.2
CDS CAA 90 bp TCTGCAGTTGGTTCCTTTAAAATAGAGCATTTGAAGAGAAATGACTaGGCTGCATCCATTTTCCCTTGTTTATATTCCACTATTGCCATA +
Preference number: 6 (lower is better)
Translates to: SAVGSFKIEHLKRND*AASIFPCLYSTIAI
Trigger: TATGGCAATAGTGGAATATAAACAAGGGAAAATGGATGCAGCCAAGTCATTTCTCTTCAAATGCTCTATTTTAAAGGAACCAACTGCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000091466.4
ENSMUST00000224386.2