Pregenerated sensors for TTC33 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022151Ensembl transcript IDs: ENSMUST00000022751.15, ENSMUST00000081640.12, ENSMUST00000118193.8, ENSMUST00000141167.2, ENSMUST00000144653.8
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGAGGTCCGGGCCTTCCGGGGGCATTTCTTTGTTTTCAATCCTCTaGGCTACTTTCTGCTGTTCTTGGAGCTTTCTGGCCCAAGAAAGG | + |
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Preference number: 1 (lower is better) Translates to: ERSGPSGGISLFSIL*ATFCCSWSFLAQER Trigger: CCTTTCTTGGGCCAGAAAGCTCCAAGAACAGCAGAAAGTAGCCCAGAGGATTGAAAACAAAGAAATGCCCCCGGAAGGCCCGGACCTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081640.12 |
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| 3UTR CCA 90 bp | CACAAACAGCAACAATCTCATCGCTTTCAAAGTCATAGTCCGGGATaGACCCTGGAGAGAGGTCCGGGCCTTCCGGGGGCATTTCTTTGT | + |
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Preference number: 1 (lower is better) Translates to: HKQQQSHRFQSHSPG*TLERGPGLPGAFLC Trigger: ACAAAGAAATGCCCCCGGAAGGCCCGGACCTCTCTCCAGGGTCCATCCCGGACTATGACTTTGAAAGCGATGAGATTGTTGCTGTTTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081640.12 |
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| 3UTR CCA 90 bp | AGCAACAATCTCATCGCTTTCAAAGTCATAGTCCGGGATGGACCCTaGAGAGAGGTCCGGGCCTTCCGGGGGCATTTCTTTGTTTTCAAT | + |
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Preference number: 1 (lower is better) Translates to: SNNLIAFKVIVRDGP*REVRAFRGHFFVFN Trigger: ATTGAAAACAAAGAAATGCCCCCGGAAGGCCCGGACCTCTCTCCAGGGTCCATCCCGGACTATGACTTTGAAAGCGATGAGATTGTTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081640.12 |
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| 3UTR CCA 90 bp | CCATTGTGTATGGCTTCACCGGGCTTTGATAAAGACGGAGCCATCTaGGGTGGAAGAGCCCTCTTCCTTCTCGTTTACGATCTCTACAGT | + |
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Preference number: 1 (lower is better) Translates to: PLCMASPGFDKDGAI*GGRALFLLVYDLYS Trigger: ACTGTAGAGATCGTAAACGAGAAGGAAGAGGGCTCTTCCACCCCAGATGGCTCCGTCTTTATCAAAGCCCGGTGAAGCCATACACAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081640.12 |
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| 3UTR GCA 90 bp | CCTTCCGGGGGCATTTCTTTGTTTTCAATCCTCTGGGCTACTTTCTaGTGTTCTTGGAGCTTTCTGGCCCAAGAAAGGTCTTCCTTCCAG | + |
|
Preference number: 1 (lower is better) Translates to: PSGGISLFSILWATF*CSWSFLAQERSSFQ Trigger: CTGGAAGGAAGACCTTTCTTGGGCCAGAAAGCTCCAAGAACAGCAGAAAGTAGCCCAGAGGATTGAAAACAAAGAAATGCCCCCGGAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081640.12 |
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| 3UTR GCA 90 bp | GATCTCTACAGTCCCAGACGCCGACACAATAACCATTGTTTTATTTaGAGACACCGACTTCTGTTTTTCTGCCACGGCTGCACAAACAGC | + |
|
Preference number: 1 (lower is better) Translates to: DLYSPRRRHNNHCFI*RHRLLFFCHGCTNS Trigger: GCTGTTTGTGCAGCCGTGGCAGAAAAACAGAAGTCGGTGTCTGCAAATAAAACAATGGTTATTGTGTCGGCGTCTGGGACTGTAGAGATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081640.12 |
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| 3UTR GCA 90 bp | CATTGTTTTATTTGCAGACACCGACTTCTGTTTTTCTGCCACGGCTaGACAAACAGCAACAATCTCATCGCTTTCAAAGTCATAGTCCGG | + |
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Preference number: 1 (lower is better) Translates to: HCFICRHRLLFFCHG*TNSNNLIAFKVIVR Trigger: CCGGACTATGACTTTGAAAGCGATGAGATTGTTGCTGTTTGTGCAGCCGTGGCAGAAAAACAGAAGTCGGTGTCTGCAAATAAAACAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081640.12 |
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| 3UTR CAA 90 bp | AAAAAGATTCAAACATCTCTCCATTGTGTATGGCTTCACCGGGCTTaGATAAAGACGGAGCCATCTGGGGTGGAAGAGCCCTCTTCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: KKIQTSLHCVWLHRA*IKTEPSGVEEPSSF Trigger: GAAGGAAGAGGGCTCTTCCACCCCAGATGGCTCCGTCTTTATCAAAGCCCGGTGAAGCCATACACAATGGAGAGATGTTTGAATCTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081640.12 |
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| 3UTR-3UTR TCA 90 bp | CTCTACAGTCCCAGACGCCGACACAATAACCATTGTTTTATTTGCAGACACCGAATGTGCAGGGCTATTTaGAAGCTTCGAATTGCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LYSPRRRHNNHCFICRHRMCRAI*KLRIAR Trigger: TCTGGCAATTCGAAGCTTTCAAATAGCCCTGCACAT...TCGGTGTCTGCAAATAAAACAATGGTTATTGTGTCGGCGTCTGGGACTGTAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081640.12 |
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| 3UTR-3UTR CCA 90 bp | CTCTACAGTCCCAGACGCCGACACAATAACCATTGTTTTATTTGCAGACACCGATTGTTTTCAATCCTCTaGGCTACTTTCTGCTGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: LYSPRRRHNNHCFICRHRLFSIL*ATFCCS Trigger: AGAACAGCAGAAAGTAGCCCAGAGGATTGAAAACAA...TCGGTGTCTGCAAATAAAACAATGGTTATTGTGTCGGCGTCTGGGACTGTAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081640.12 |
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| 3UTR-3UTR TCA 90 bp | ATCTCTGACACACCAGTATCCAGTTATCAAGTCCTGAAGAAGACAGTTAGCACTGAAAACTTACACTGGTaGAGCAAGAAAAATGGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: ISDTPVSSYQVLKKTVSTENLHW*SKKNGR Trigger: TCTCCCATTTTTCTTGCTTCACCAGTGTAAGTTTTC...AGTGCTAACTGTCTTCTTCAGGACTTGATAACTGGATACTGGTGTGTCAGAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
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| 3UTR-3UTR TCA 90 bp | GCCATTCATCTTGACAAAGGACTGACTTGTGGTAAAGATGACTCAATCTTGACAAGAAAAATGGGAGAATaGCAACAGCAGATTTACAGG | + |
|
Preference number: 2 (lower is better) Translates to: AIHLDKGLTCGKDDSILTRKMGE*QQQIYR Trigger: CCTGTAAATCTGCTGTTGTCATTCTCCCATTTTTCT...TGTCAAGATTGAGTCATCTTTACCACAAGTCAGTCCTTTGTCAAGATGAATGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
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| 3UTR-3UTR TCA 90 bp | TTAGCACAACAACAAGAACAACGAAACCTTCAAAGAAATGTTCAGGACACATACCCAGTTATCAAGTCCTaGAGAAGACAGTTAGCACTT | + |
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Preference number: 2 (lower is better) Translates to: LAQQQEQRNLQRNVQDTYPVIKS*RRQLAL Trigger: AAGTGCTAACTGTCTTCTTCAGGACTTGATAACTGG...GTATGTGTCCTGAACATTTCTTTGAAGGTTTCGTTGTTCTTGTTGTTGTGCTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
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| 3UTR-3UTR GCA 90 bp | AAAAATGGGAGAATGACAACAGCAGATTTACAGGAGGGAAAGAAACCGCACACTAACCATTGTTTTATTTaGAGACACCGACTTCTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: KNGRMTTADLQEGKKPHTNHCFI*RHRLLF Trigger: AAACAGAAGTCGGTGTCTGCAAATAAAACAATGGTT...AGTGTGCGGTTTCTTTCCCTCCTGTAAATCTGCTGTTGTCATTCTCCCATTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081640.12 |
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| 3UTR-3UTR TCA 90 bp | CACAACAACAAGAACAACGAAACCTTCAAAGAAATGTTCAGGACACATACATCTAGAAAAATGGGAGAATaGCAACAGCAGATTTACAGG | + |
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Preference number: 2 (lower is better) Translates to: HNNKNNETFKEMFRTHTSRKMGE*QQQIYR Trigger: CCTGTAAATCTGCTGTTGTCATTCTCCCATTTTTCT...AGATGTATGTGTCCTGAACATTTCTTTGAAGGTTTCGTTGTTCTTGTTGTTGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCATCTTGACAAAGGACTGACTTGTGGTAAAGATGACTCAATCTTGACAGTAGAAAACTTACACTGGTaGAGCAAGAAAAATGGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: IHLDKGLTCGKDDSILTVENLHW*SKKNGR Trigger: TCTCCCATTTTTCTTGCTTCACCAGTGTAAGTTTTC...TACTGTCAAGATTGAGTCATCTTTACCACAAGTCAGTCCTTTGTCAAGATGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGCACAACAACAAGAACAACGAAACCTTCAAAGAAATGTTCAGGACACATACGTGAAGCAAGAAAAATaGGAGAATGACAACAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LAQQQEQRNLQRNVQDTYVKQEK*ENDNSR Trigger: TCTGCTGTTGTCATTCTCCCATTTTTCTTGCTTCAC...GTATGTGTCCTGAACATTTCTTTGAAGGTTTCGTTGTTCTTGTTGTTGTGCTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
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| 3UTR-3UTR TCA 90 bp | GAAGCACAAATTAGAACATTAGCACAACAACAAGAACAACGAAACCTTCAAAGAGAAAACTTACACTGGTaGAGCAAGAAAAATGGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: EAQIRTLAQQQEQRNLQRENLHW*SKKNGR Trigger: TCTCCCATTTTTCTTGCTTCACCAGTGTAAGTTTTC...TCTTTGAAGGTTTCGTTGTTCTTGTTGTTGTGCTAATGTTCTAATTTGTGCTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
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| 3UTR CCA 72 bp | CAACAATCTCATCGCTTTCAAAGTCATAGTCCGGGATaGACCCTGGAGAGAGGTCCGGGCCTTCCGGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: QQSHRFQSHSPG*TLERGPGLPGA Trigger: TGCCCCCGGAAGGCCCGGACCTCTCTCCAGGGTCCATCCCGGACTATGACTTTGAAAGCGATGAGATTGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081640.12 |
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| 3UTR CCA 72 bp | CTCATCGCTTTCAAAGTCATAGTCCGGGATGGACCCTaGAGAGAGGTCCGGGCCTTCCGGGGGCATTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LIAFKVIVRDGP*REVRAFRGHFF Trigger: AAAGAAATGCCCCCGGAAGGCCCGGACCTCTCTCCAGGGTCCATCCCGGACTATGACTTTGAAAGCGATGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081640.12 |
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| 3UTR CCA 72 bp | ATGGCTTCACCGGGCTTTGATAAAGACGGAGCCATCTaGGGTGGAAGAGCCCTCTTCCTTCTCGTTTACGAT | + |
|
Preference number: 3 (lower is better) Translates to: MASPGFDKDGAI*GGRALFLLVYD Trigger: ATCGTAAACGAGAAGGAAGAGGGCTCTTCCACCCCAGATGGCTCCGTCTTTATCAAAGCCCGGTGAAGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081640.12 |
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| 3UTR GCA 72 bp | AGTCCCAGACGCCGACACAATAACCATTGTTTTATTTaGAGACACCGACTTCTGTTTTTCTGCCACGGCTGC | + |
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Preference number: 3 (lower is better) Translates to: SPRRRHNNHCFI*RHRLLFFCHGC Trigger: GCAGCCGTGGCAGAAAAACAGAAGTCGGTGTCTGCAAATAAAACAATGGTTATTGTGTCGGCGTCTGGGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081640.12 |
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| 3UTR-3UTR CAA 90 bp | ATTTGCAGACACCGACTTCTGTTTTTCTGCCACGGCTGCACAAACAGCAACAATTATGTGCAGGGCTATTaGAAAGCTTCGAATTGCCAG | + |
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Preference number: 3 (lower is better) Translates to: ICRHRLLFFCHGCTNSNNYVQGY*KASNCQ Trigger: CTGGCAATTCGAAGCTTTCAAATAGCCCTGCACATA...ATTGTTGCTGTTTGTGCAGCCGTGGCAGAAAAACAGAAGTCGGTGTCTGCAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081640.12 |
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| 3UTR GCA 72 bp | GGCATTTCTTTGTTTTCAATCCTCTGGGCTACTTTCTaGTGTTCTTGGAGCTTTCTGGCCCAAGAAAGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: GISLFSILWATF*CSWSFLAQERS Trigger: AGACCTTTCTTGGGCCAGAAAGCTCCAAGAACAGCAGAAAGTAGCCCAGAGGATTGAAAACAAAGAAATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081640.12 |
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| 3UTR GCA 72 bp | ATTTGCAGACACCGACTTCTGTTTTTCTGCCACGGCTaGACAAACAGCAACAATCTCATCGCTTTCAAAGTC | + |
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Preference number: 3 (lower is better) Translates to: ICRHRLLFFCHG*TNSNNLIAFKV Trigger: GACTTTGAAAGCGATGAGATTGTTGCTGTTTGTGCAGCCGTGGCAGAAAAACAGAAGTCGGTGTCTGCAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081640.12 |
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| 3UTR-3UTR CAA 90 bp | TTAGCACAACAACAAGAACAACGAAACCTTCAAAGAAATGTTCAGGACACATACTCCGGGGGCATTTCTTaGTTTTCAATCCTCTGGGCT | + |
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Preference number: 3 (lower is better) Translates to: LAQQQEQRNLQRNVQDTYSGGIS*FSILWA Trigger: AGCCCAGAGGATTGAAAACAAAGAAATGCCCCCGGA...GTATGTGTCCTGAACATTTCTTTGAAGGTTTCGTTGTTCTTGTTGTTGTGCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081640.12 |
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| 3UTR TCA 72 bp | AGTTCAGGGTTCATCGGATATATGTGCAGGGCTATTTaGAAGCTTCGAATTGCCAGAACTATCTCTCCTAAT | + |
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Preference number: 3 (lower is better) Translates to: SSGFIGYMCRAI*KLRIARTISPN Trigger: ATTAGGAGAGATAGTTCTGGCAATTCGAAGCTTTCAAATAGCCCTGCACATATATCCGATGAACCCTGAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081640.12 |
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| 3UTR TCA 72 bp | CCATCTCTGACACACCAGTATCCAGTTATCAAGTCCTaGAGAAGACAGTTAGCACTTTTTAACTTTAAAGTC | + |
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Preference number: 3 (lower is better) Translates to: PSLTHQYPVIKS*RRQLALFNFKV Trigger: GACTTTAAAGTTAAAAAGTGCTAACTGTCTTCTTCAGGACTTGATAACTGGATACTGGTGTGTCAGAGATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
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| 3UTR CAA 72 bp | CAAACATCTCTCCATTGTGTATGGCTTCACCGGGCTTaGATAAAGACGGAGCCATCTGGGGTGGAAGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: QTSLHCVWLHRA*IKTEPSGVEEP Trigger: GGGCTCTTCCACCCCAGATGGCTCCGTCTTTATCAAAGCCCGGTGAAGCCATACACAATGGAGAGATGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081640.12 |
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| CDS-3UTR TCA 90 bp | GCACACTTCCTTTATCACAAAGCAAAGTCTCCATGTCGGCACTGTAGTAACACGTTGTTTTCAGCCAGCTaGGCCCCTTCATCCTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: AHFLYHKAKSPCRHCSNTLFSAS*APSSFS Trigger: GCTGAAGGATGAAGGGGCTCAGCTGGCTGAAAACAA...CGTGTTACTACAGTGCCGACATGGAGACTTTGCTTTGTGATAAAGGAAGTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
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| CDS-3UTR TCA 90 bp | CACACTTCCTTTATCACAAAGCAAAGTCTCCATGTCGGCACTGTAGTAACACGCAGTGTGGGTTACGCTTaGCAGCCATCTCTGCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: HTSFITKQSLHVGTVVTRSVGYA*QPSLLH Trigger: ATGCAGCAGAGATGGCTGTCAAGCGTAACCCACACT...GCGTGTTACTACAGTGCCGACATGGAGACTTTGCTTTGTGATAAAGGAAGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
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| CDS-3UTR CCA 90 bp | AAACCGCACACTTCCTTTATCACAAAGCAAAGTCTCCATGTCGGCACTGTAGTACCTTCCTCCGTTTGCTaGCCTGAAGCCAGTTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: KPHTSFITKQSLHVGTVVPSSVC*PEASSH Trigger: ATGGGAACTGGCTTCAGGCCAGCAAACGGAGGAAGG...TACTACAGTGCCGACATGGAGACTTTGCTTTGTGATAAAGGAAGTGTGCGGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
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| CDS-3UTR TCA 90 bp | ACAGGAGGGAAAGAAACCGCACACTTCCTTTATCACAAAGCAAAGTCTCCATGTTTGTTTTCAGCCAGCTaGGCCCCTTCATCCTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: TGGKETAHFLYHKAKSPCLFSAS*APSSFS Trigger: GCTGAAGGATGAAGGGGCTCAGCTGGCTGAAAACAA...ACATGGAGACTTTGCTTTGTGATAAAGGAAGTGTGCGGTTTCTTTCCCTCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
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| CDS-3UTR GCA 90 bp | ATTTGCAGACACCGACTTCTGTTTTTCTGCCACGGCTGCACAAACAGCAACAATCTCATCAGCTGCTTCTaGTTCAAACTGCTGGGACGT | + |
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Preference number: 4 (lower is better) Translates to: ICRHRLLFFCHGCTNSNNLISCF*FKLLGR Trigger: ACGTCCCAGCAGTTTGAAGCAGAAGCAGCTGATGAG...ATTGTTGCTGTTTGTGCAGCCGTGGCAGAAAAACAGAAGTCGGTGTCTGCAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081640.12 |
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| CDS-3UTR GCA 90 bp | CACACTTCCTTTATCACAAAGCAAAGTCTCCATGTCGGCACTGTAGTAACACGCATCCTCGTTCTCAGCTaGATCCTTCTCATCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: HTSFITKQSLHVGTVVTRILVLS*ILLISC Trigger: GCAGCTGATGAGAAGGATGCAGCTGAGAACGAGGAT...GCGTGTTACTACAGTGCCGACATGGAGACTTTGCTTTGTGATAAAGGAAGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
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| CDS-3UTR GCA 90 bp | ACCGCACACTTCCTTTATCACAAAGCAAAGTCTCCATGTCGGCACTGTAGTAACGACAGCCATCTCTGCTaGATGGACTGCTGGAAACAT | + |
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Preference number: 4 (lower is better) Translates to: TAHFLYHKAKSPCRHCSNDSHLC*MDCWKH Trigger: ATGTTTCCAGCAGTCCATGCAGCAGAGATGGCTGTC...GTTACTACAGTGCCGACATGGAGACTTTGCTTTGTGATAAAGGAAGTGTGCGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
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| CDS-3UTR GCA 90 bp | GCACACTTCCTTTATCACAAAGCAAAGTCTCCATGTCGGCACTGTAGTAACACGGACAGCCATCTCTGCTaGATGGACTGCTGGAAACAT | + |
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Preference number: 4 (lower is better) Translates to: AHFLYHKAKSPCRHCSNTDSHLC*MDCWKH Trigger: ATGTTTCCAGCAGTCCATGCAGCAGAGATGGCTGTC...CGTGTTACTACAGTGCCGACATGGAGACTTTGCTTTGTGATAAAGGAAGTGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
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| CDS-3UTR CCA 90 bp | TCGGATATATGTGCAGGGCTATTTGAAAGCTTCGAATTGCCAGAACTATCTCTCCAAACTGCTGGGACGTaGCCTTGGATACCTTCTCGC | + |
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Preference number: 4 (lower is better) Translates to: SDICAGLFESFELPELSLQTAGT*PWIPSR Trigger: GCGAGAAGGTATCCAAGGCCACGTCCCAGCAGTTTG...GAGAGATAGTTCTGGCAATTCGAAGCTTTCAAATAGCCCTGCACATATATCCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081640.12 |
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| CDS-3UTR TCA 90 bp | AAAAATGGGAGAATGACAACAGCAGATTTACAGGAGGGAAAGAAACCGCACACTAGTGTGGGTTACGCTTaGCAGCCATCTCTGCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: KNGRMTTADLQEGKKPHTSVGYA*QPSLLH Trigger: ATGCAGCAGAGATGGCTGTCAAGCGTAACCCACACT...AGTGTGCGGTTTCTTTCCCTCCTGTAAATCTGCTGTTGTCATTCTCCCATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
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| CDS-3UTR GCA 90 bp | ATCTCTGACACACCAGTATCCAGTTATCAAGTCCTGAAGAAGACAGTTAGCACTGCTTCTGCTTCAAACTaGTGGGACGTGGCCTTGGAT | + |
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Preference number: 4 (lower is better) Translates to: ISDTPVSSYQVLKKTVSTASASN*WDVALD Trigger: ATCCAAGGCCACGTCCCAGCAGTTTGAAGCAGAAGC...AGTGCTAACTGTCTTCTTCAGGACTTGATAACTGGATACTGGTGTGTCAGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
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| CDS-3UTR GCA 90 bp | TCCGGGGGCATTTCTTTGTTTTCAATCCTCTGGGCTACTTTCTGCTGTTCTTGGATCCTTCTCATCAGCTaGTTCTGCTTCAAACTGCTG | + |
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Preference number: 4 (lower is better) Translates to: SGGISLFSILWATFCCSWILLIS*FCFKLL Trigger: CAGCAGTTTGAAGCAGAAGCAGCTGATGAGAAGGAT...CCAAGAACAGCAGAAAGTAGCCCAGAGGATTGAAAACAAAGAAATGCCCCCGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081640.12 |
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| CDS-3UTR GCA 90 bp | GCACACTTCCTTTATCACAAAGCAAAGTCTCCATGTCGGCACTGTAGTAACACGCTCTGGGCTACTTTCTaGTGTTCTTGGAGCTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: AHFLYHKAKSPCRHCSNTLWATF*CSWSFL Trigger: CAGAAAGCTCCAAGAACAGCAGAAAGTAGCCCAGAG...CGTGTTACTACAGTGCCGACATGGAGACTTTGCTTTGTGATAAAGGAAGTGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 |
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| CDS-3UTR CCA 90 bp | ATTCAAGAACACACTTTCCAAACTGTGCCTTTAAGGGTACTTTCCCATACAGTCCAAACTGCTGGGACGTaGCCTTGGATACCTTCTCGC | + |
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Preference number: 4 (lower is better) Translates to: IQEHTFQTVPLRVLSHTVQTAGT*PWIPSR Trigger: GCGAGAAGGTATCCAAGGCCACGTCCCAGCAGTTTG...GACTGTATGGGAAAGTACCCTTAAAGGCACAGTTTGGAAAGTGTGTTCTTGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
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| CDS-3UTR CCA 90 bp | ATTCAAGAACACACTTTCCAAACTGTGCCTTTAAGGGTACTTTCCCATACAGTCCCTTCCTCCGTTTGCTaGCCTGAAGCCAGTTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: IQEHTFQTVPLRVLSHTVPSSVC*PEASSH Trigger: ATGGGAACTGGCTTCAGGCCAGCAAACGGAGGAAGG...GACTGTATGGGAAAGTACCCTTAAAGGCACAGTTTGGAAAGTGTGTTCTTGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
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| CDS-3UTR TCA 90 bp | ATTCAAGAACACACTTTCCAAACTGTGCCTTTAAGGGTACTTTCCCATACAGTCTTGTTTTCAGCCAGCTaGGCCCCTTCATCCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IQEHTFQTVPLRVLSHTVLFSAS*APSSFS Trigger: GCTGAAGGATGAAGGGGCTCAGCTGGCTGAAAACAA...GACTGTATGGGAAAGTACCCTTAAAGGCACAGTTTGGAAAGTGTGTTCTTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
||
| CDS-3UTR GCA 90 bp | CAATCTGCAAATGCCATTCATCTTGACAAAGGACTGACTTGTGGTAAAGATGACGCTTCTGCTTCAAACTaGTGGGACGTGGCCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QSANAIHLDKGLTCGKDDASASN*WDVALD Trigger: ATCCAAGGCCACGTCCCAGCAGTTTGAAGCAGAAGC...GTCATCTTTACCACAAGTCAGTCCTTTGTCAAGATGAATGGCATTTGCAGATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
||
| CDS-3UTR GCA 90 bp | ATCTCTGACACACCAGTATCCAGTTATCAAGTCCTGAAGAAGACAGTTAGCACTATCCTCGTTCTCAGCTaGATCCTTCTCATCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ISDTPVSSYQVLKKTVSTILVLS*ILLISC Trigger: GCAGCTGATGAGAAGGATGCAGCTGAGAACGAGGAT...AGTGCTAACTGTCTTCTTCAGGACTTGATAACTGGATACTGGTGTGTCAGAGAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
||
| CDS-3UTR CCA 90 bp | ATTCAAGAACACACTTTCCAAACTGTGCCTTTAAGGGTACTTTCCCATACAGTCTCTGCTTCAAACTGCTaGGACGTGGCCTTGGATACC | + |
|
Preference number: 4 (lower is better) Translates to: IQEHTFQTVPLRVLSHTVSASNC*DVALDT Trigger: GGTATCCAAGGCCACGTCCCAGCAGTTTGAAGCAGA...GACTGTATGGGAAAGTACCCTTAAAGGCACAGTTTGGAAAGTGTGTTCTTGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
||
| CDS-3UTR TCA 90 bp | GCAGATTTACAGGAGGGAAAGAAACCGCACACTTCCTTTATCACAAAGCAAAGTGCTTCATCCCACTTCTaGATTGCCTCCTTGTATCGT | + |
|
Preference number: 4 (lower is better) Translates to: ADLQEGKKPHTSFITKQSASSHF*IASLYR Trigger: ACGATACAAGGAGGCAATTCAGAAGTGGGATGAAGC...ACTTTGCTTTGTGATAAAGGAAGTGTGCGGTTTCTTTCCCTCCTGTAAATCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 |
||
| CDS-3UTR TCA 90 bp | AAAAATGGGAGAATGACAACAGCAGATTTACAGGAGGGAAAGAAACCGCACACTGCTGGAAACATTTCATaGAGAGACAGCAGGACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KNGRMTTADLQEGKKPHTAGNIS*RDSRTC Trigger: ACAGGTCCTGCTGTCTCTTCATGAAATGTTTCCAGC...AGTGTGCGGTTTCTTTCCCTCCTGTAAATCTGCTGTTGTCATTCTCCCATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 |
||
| CDS-3UTR TCA 90 bp | ACTATTCAAGAACACACTTTCCAAACTGTGCCTTTAAGGGTACTTTCCCATACAAGTGTGGGTTACGCTTaGCAGCCATCTCTGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TIQEHTFQTVPLRVLSHTSVGYA*QPSLLH Trigger: ATGCAGCAGAGATGGCTGTCAAGCGTAACCCACACT...TGTATGGGAAAGTACCCTTAAAGGCACAGTTTGGAAAGTGTGTTCTTGAATAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
||
| CDS-3UTR TCA 90 bp | AAACCGCACACTTCCTTTATCACAAAGCAAAGTCTCCATGTCGGCACTGTAGTAATGTGCAGGGCTATTTaGAAGCTTCGAATTGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KPHTSFITKQSLHVGTVVMCRAI*KLRIAR Trigger: TCTGGCAATTCGAAGCTTTCAAATAGCCCTGCACAT...TACTACAGTGCCGACATGGAGACTTTGCTTTGTGATAAAGGAAGTGTGCGGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 |
||
| CDS-3UTR GCA 90 bp | CAACAACAAGAACAACGAAACCTTCAAAGAAATGTTCAGGACACATACATCTGCGCTTCTGCTTCAAACTaGTGGGACGTGGCCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QQQEQRNLQRNVQDTYICASASN*WDVALD Trigger: ATCCAAGGCCACGTCCCAGCAGTTTGAAGCAGAAGC...GCAGATGTATGTGTCCTGAACATTTCTTTGAAGGTTTCGTTGTTCTTGTTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
||
| CDS-3UTR GCA 90 bp | AAACCGCACACTTCCTTTATCACAAAGCAAAGTCTCCATGTCGGCACTGTAGTAATCCTTCTCATCAGCTaGTTCTGCTTCAAACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KPHTSFITKQSLHVGTVVILLIS*FCFKLL Trigger: CAGCAGTTTGAAGCAGAAGCAGCTGATGAGAAGGAT...TACTACAGTGCCGACATGGAGACTTTGCTTTGTGATAAAGGAAGTGTGCGGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
||
| CDS-3UTR GCA 90 bp | AAACCGCACACTTCCTTTATCACAAAGCAAAGTCTCCATGTCGGCACTGTAGTACTCTGCTGCATGGACTaGTGGAAACATTTCATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KPHTSFITKQSLHVGTVVLCCMD*WKHFMK Trigger: CTTCATGAAATGTTTCCAGCAGTCCATGCAGCAGAG...TACTACAGTGCCGACATGGAGACTTTGCTTTGTGATAAAGGAAGTGTGCGGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
||
| CDS-3UTR CCA 90 bp | AGCACAACAACAAGAACAACGAAACCTTCAAAGAAATGTTCAGGACACATACATCAAACTGCTGGGACGTaGCCTTGGATACCTTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: STTTRTTKPSKKCSGHIHQTAGT*PWIPSR Trigger: GCGAGAAGGTATCCAAGGCCACGTCCCAGCAGTTTG...ATGTATGTGTCCTGAACATTTCTTTGAAGGTTTCGTTGTTCTTGTTGTTGTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
||
| CDS-3UTR CCA 90 bp | CAACAACAAGAACAACGAAACCTTCAAAGAAATGTTCAGGACACATACATCTGCTCTGCTTCAAACTGCTaGGACGTGGCCTTGGATACC | + |
|
Preference number: 4 (lower is better) Translates to: QQQEQRNLQRNVQDTYICSASNC*DVALDT Trigger: GGTATCCAAGGCCACGTCCCAGCAGTTTGAAGCAGA...GCAGATGTATGTGTCCTGAACATTTCTTTGAAGGTTTCGTTGTTCTTGTTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
||
| CDS-3UTR CCA 90 bp | ACTTTCCAAACTGTGCCTTTAAGGGTACTTTCCCATACAGTCAAATTAAATGCTCCTTCCTCCGTTTGCTaGCCTGAAGCCAGTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TFQTVPLRVLSHTVKLNAPSSVC*PEASSH Trigger: ATGGGAACTGGCTTCAGGCCAGCAAACGGAGGAAGG...AGCATTTAATTTGACTGTATGGGAAAGTACCCTTAAAGGCACAGTTTGGAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
||
| CDS-3UTR CCA 90 bp | GCAGATTTACAGGAGGGAAAGAAACCGCACACTTCCTTTATCACAAAGCAAAGTTCATCTCATAAAGGGTaGCATCACCTGGGGTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ADLQEGKKPHTSFITKQSSSHKG*HHLGLA Trigger: AGCTAACCCCAGGTGATGCCACCCTTTATGAGATGA...ACTTTGCTTTGTGATAAAGGAAGTGTGCGGTTTCTTTCCCTCCTGTAAATCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 |
||
| 3UTR CAA 72 bp | TCGGATATATGTGCAGGGCTATTTGAAAGCTTCGAATaGCCAGAACTATCTCTCCTAATCCAAGCTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SDICAGLFESFE*PELSLLIQAEL Trigger: GAGCTCAGCTTGGATTAGGAGAGATAGTTCTGGCAATTCGAAGCTTTCAAATAGCCCTGCACATATATCCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081640.12 |
||
| CDS-3UTR TCA 90 bp | AAAAATGGGAGAATGACAACAGCAGATTTACAGGAGGGAAAGAAACCGCACACTAGACAGCAGGACCTGTaGTTTCATCTCATAAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KNGRMTTADLQEGKKPHTRQQDL*FHLIKG Trigger: ACCCTTTATGAGATGAAATCACAGGTCCTGCTGTCT...AGTGTGCGGTTTCTTTCCCTCCTGTAAATCTGCTGTTGTCATTCTCCCATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 |
||
| CDS-3UTR TCA 90 bp | ATTCAAGAACACACTTTCCAAACTGTGCCTTTAAGGGTACTTTCCCATACAGTCGCTGGAAACATTTCATaGAGAGACAGCAGGACCGTT | + |
|
Preference number: 4 (lower is better) Translates to: IQEHTFQTVPLRVLSHTVAGNIS*RDSRTV Trigger: AACGGTCCTGCTGTCTCTTCATGAAATGTTTCCAGC...GACTGTATGGGAAAGTACCCTTAAAGGCACAGTTTGGAAAGTGTGTTCTTGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081640.12 |
||
| CDS-3UTR GCA 90 bp | CAACAACAAGAACAACGAAACCTTCAAAGAAATGTTCAGGACACATACATCTGCATCCTCGTTCTCAGCTaGATCCTTCTCATCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QQQEQRNLQRNVQDTYICILVLS*ILLISC Trigger: GCAGCTGATGAGAAGGATGCAGCTGAGAACGAGGAT...GCAGATGTATGTGTCCTGAACATTTCTTTGAAGGTTTCGTTGTTCTTGTTGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
||
| CDS-3UTR GCA 90 bp | ATTCATCTTGACAAAGGACTGACTTGTGGTAAAGATGACTCAATCTTGACAGTATTTCCTTCCTCCGTTTaGTGGCCTGAAGCCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IHLDKGLTCGKDDSILTVFPSSV*WPEASS Trigger: GGAACTGGCTTCAGGCCAGCAAACGGAGGAAGGAAA...TACTGTCAAGATTGAGTCATCTTTACCACAAGTCAGTCCTTTGTCAAGATGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
||
| CDS-3UTR GCA 90 bp | AGCACAACAACAAGAACAACGAAACCTTCAAAGAAATGTTCAGGACACATACATTTTCCTTCCTCCGTTTaGTGGCCTGAAGCCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: STTTRTTKPSKKCSGHIHFPSSV*WPEASS Trigger: GGAACTGGCTTCAGGCCAGCAAACGGAGGAAGGAAA...ATGTATGTGTCCTGAACATTTCTTTGAAGGTTTCGTTGTTCTTGTTGTTGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
||
| CDS-3UTR GCA 90 bp | GCACACTTCCTTTATCACAAAGCAAAGTCTCCATGTCGGCACTGTAGTAACACGATCCCACTTCTGAATTaGCTCCTTGTATCGTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AHFLYHKAKSPCRHCSNTIPLLN*LLVSFV Trigger: AACAAACGATACAAGGAGGCAATTCAGAAGTGGGAT...CGTGTTACTACAGTGCCGACATGGAGACTTTGCTTTGTGATAAAGGAAGTGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 |
||
| CDS-3UTR CCA 90 bp | ATTCAAGAACACACTTTCCAAACTGTGCCTTTAAGGGTACTTTCCCATACAGTCTCATCTCATAAAGGGTaGCATCACCTGGGGTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IQEHTFQTVPLRVLSHTVSSHKG*HHLGLA Trigger: AGCTAACCCCAGGTGATGCCACCCTTTATGAGATGA...GACTGTATGGGAAAGTACCCTTAAAGGCACAGTTTGGAAAGTGTGTTCTTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGAGGGAAAGAAACCGCACACTTCCTTTATCACAAAGCAAAGTCTCCATGTTGCTGCATGGACTGCTaGAAACATTTCATGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TGGKETAHFLYHKAKSPCCCMDC*KHFMKR Trigger: TCTCTTCATGAAATGTTTCCAGCAGTCCATGCAGCA...ACATGGAGACTTTGCTTTGTGATAAAGGAAGTGTGCGGTTTCTTTCCCTCCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
||
| CDS-3UTR CCA 90 bp | AAAAATGGGAGAATGACAACAGCAGATTTACAGGAGGGAAAGAAACCGCACACTACTTTCTGCTGTTCTTaGAGCTTTCTGGCCCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KNGRMTTADLQEGKKPHTTFCCS*SFLAQE Trigger: TTCTTGGGCCAGAAAGCTCCAAGAACAGCAGAAAGT...AGTGTGCGGTTTCTTTCCCTCCTGTAAATCTGCTGTTGTCATTCTCCCATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 |
||
| CDS-3UTR CCA 90 bp | CACACTTCCTTTATCACAAAGCAAAGTCTCCATGTCGGCACTGTAGTAACACGCTTGTTTTCAATCCTCTaGGCTACTTTCTGCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HTSFITKQSLHVGTVVTRLFSIL*ATFCCS Trigger: AGAACAGCAGAAAGTAGCCCAGAGGATTGAAAACAA...GCGTGTTACTACAGTGCCGACATGGAGACTTTGCTTTGTGATAAAGGAAGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 |
||
| CDS-3UTR TCA 90 bp | GCACAACAACAAGAACAACGAAACCTTCAAAGAAATGTTCAGGACACATACATCGCTGGAAACATTTCATaGAGAGACAGCAGGACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AQQQEQRNLQRNVQDTYIAGNIS*RDSRTC Trigger: ACAGGTCCTGCTGTCTCTTCATGAAATGTTTCCAGC...GATGTATGTGTCCTGAACATTTCTTTGAAGGTTTCGTTGTTCTTGTTGTTGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 |
||
| CDS-3UTR GCA 90 bp | AGCACAACAACAAGAACAACGAAACCTTCAAAGAAATGTTCAGGACACATACATCTCATCAGCTGCTTCTaGTTCAAACTGCTGGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: STTTRTTKPSKKCSGHIHLISCF*FKLLGR Trigger: ACGTCCCAGCAGTTTGAAGCAGAAGCAGCTGATGAG...ATGTATGTGTCCTGAACATTTCTTTGAAGGTTTCGTTGTTCTTGTTGTTGTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
||
| CDS-3UTR GCA 90 bp | CACAACAACAAGAACAACGAAACCTTCAAAGAAATGTTCAGGACACATACATCTGACAGCCATCTCTGCTaGATGGACTGCTGGAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: HNNKNNETFKEMFRTHTSDSHLC*MDCWKH Trigger: ATGTTTCCAGCAGTCCATGCAGCAGAGATGGCTGTC...AGATGTATGTGTCCTGAACATTTCTTTGAAGGTTTCGTTGTTCTTGTTGTTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
||
| CDS-3UTR GCA 90 bp | CAACAACAAGAACAACGAAACCTTCAAAGAAATGTTCAGGACACATACATCTGCCTCTGGGCTACTTTCTaGTGTTCTTGGAGCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QQQEQRNLQRNVQDTYICLWATF*CSWSFL Trigger: CAGAAAGCTCCAAGAACAGCAGAAAGTAGCCCAGAG...GCAGATGTATGTGTCCTGAACATTTCTTTGAAGGTTTCGTTGTTCTTGTTGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 |
||
| CDS-3UTR CCA 90 bp | ATCTCTGACACACCAGTATCCAGTTATCAAGTCCTGAAGAAGACAGTTAGCACTTGCTGCATGGACTGCTaGAAACATTTCATGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ISDTPVSSYQVLKKTVSTCCMDC*KHFMKR Trigger: TCTCTTCATGAAATGTTTCCAGCAGTCCATGCAGCA...AGTGCTAACTGTCTTCTTCAGGACTTGATAACTGGATACTGGTGTGTCAGAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
||
| CDS-3UTR CCA 90 bp | AAAAATGGGAGAATGACAACAGCAGATTTACAGGAGGGAAAGAAACCGCACACTTGCTGCATGGACTGCTaGAAACATTTCATGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KNGRMTTADLQEGKKPHTCCMDC*KHFMKR Trigger: TCTCTTCATGAAATGTTTCCAGCAGTCCATGCAGCA...AGTGTGCGGTTTCTTTCCCTCCTGTAAATCTGCTGTTGTCATTCTCCCATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
||
| CDS-3UTR TCA 90 bp | ACTTTCCAAACTGTGCCTTTAAGGGTACTTTCCCATACAGTCAAATTAAATGCTGCTTCATCCCACTTCTaGATTGCCTCCTTGTATCGT | + |
|
Preference number: 4 (lower is better) Translates to: TFQTVPLRVLSHTVKLNAASSHF*IASLYR Trigger: ACGATACAAGGAGGCAATTCAGAAGTGGGATGAAGC...AGCATTTAATTTGACTGTATGGGAAAGTACCCTTAAAGGCACAGTTTGGAAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 |
||
| CDS-3UTR GCA 90 bp | GCACAACAACAAGAACAACGAAACCTTCAAAGAAATGTTCAGGACACATACATCATCCTTCTCATCAGCTaGTTCTGCTTCAAACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AQQQEQRNLQRNVQDTYIILLIS*FCFKLL Trigger: CAGCAGTTTGAAGCAGAAGCAGCTGATGAGAAGGAT...GATGTATGTGTCCTGAACATTTCTTTGAAGGTTTCGTTGTTCTTGTTGTTGTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
||
| CDS-3UTR GCA 90 bp | AAAAATGGGAGAATGACAACAGCAGATTTACAGGAGGGAAAGAAACCGCACACTATCCCACTTCTGAATTaGCTCCTTGTATCGTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KNGRMTTADLQEGKKPHTIPLLN*LLVSFV Trigger: AACAAACGATACAAGGAGGCAATTCAGAAGTGGGAT...AGTGTGCGGTTTCTTTCCCTCCTGTAAATCTGCTGTTGTCATTCTCCCATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 |
||
| CDS-3UTR GCA 90 bp | CAACAACAAGAACAACGAAACCTTCAAAGAAATGTTCAGGACACATACATCTGCCTCTGCTGCATGGACTaGTGGAAACATTTCATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QQQEQRNLQRNVQDTYICLCCMD*WKHFMK Trigger: CTTCATGAAATGTTTCCAGCAGTCCATGCAGCAGAG...GCAGATGTATGTGTCCTGAACATTTCTTTGAAGGTTTCGTTGTTCTTGTTGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
||
| CDS-3UTR TCA 90 bp | ATTCATCTTGACAAAGGACTGACTTGTGGTAAAGATGACTCAATCTTGACAGTAAGACAGCAGGACCTGTaGTTTCATCTCATAAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: IHLDKGLTCGKDDSILTVRQQDL*FHLIKG Trigger: ACCCTTTATGAGATGAAATCACAGGTCCTGCTGTCT...TACTGTCAAGATTGAGTCATCTTTACCACAAGTCAGTCCTTTGTCAAGATGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 |
||
| CDS-3UTR TCA 90 bp | CACAACAACAAGAACAACGAAACCTTCAAAGAAATGTTCAGGACACATACATCTATGTGCAGGGCTATTTaGAAGCTTCGAATTGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HNNKNNETFKEMFRTHTSMCRAI*KLRIAR Trigger: TCTGGCAATTCGAAGCTTTCAAATAGCCCTGCACAT...AGATGTATGTGTCCTGAACATTTCTTTGAAGGTTTCGTTGTTCTTGTTGTTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 |
||
| CDS-3UTR GCA 90 bp | ACTTTCCAAACTGTGCCTTTAAGGGTACTTTCCCATACAGTCAAATTAAATGCTCTCTGCTGCATGGACTaGTGGAAACATTTCATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TFQTVPLRVLSHTVKLNALCCMD*WKHFMK Trigger: CTTCATGAAATGTTTCCAGCAGTCCATGCAGCAGAG...AGCATTTAATTTGACTGTATGGGAAAGTACCCTTAAAGGCACAGTTTGGAAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
||
| CDS-3UTR GCA 90 bp | CACAACAACAAGAACAACGAAACCTTCAAAGAAATGTTCAGGACACATACATCTTTTTTCTGCCACGGCTaGACAAACAGCAACAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: HNNKNNETFKEMFRTHTSFFCHG*TNSNNL Trigger: GAGATTGTTGCTGTTTGTGCAGCCGTGGCAGAAAAA...AGATGTATGTGTCCTGAACATTTCTTTGAAGGTTTCGTTGTTCTTGTTGTTGTG 40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 |
||
| CDS-3UTR GCA 90 bp | ATTCATCTTGACAAAGGACTGACTTGTGGTAAAGATGACTCAATCTTGACAGTATTTTTCTGCCACGGCTaGACAAACAGCAACAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: IHLDKGLTCGKDDSILTVFFCHG*TNSNNL Trigger: GAGATTGTTGCTGTTTGTGCAGCCGTGGCAGAAAAA...TACTGTCAAGATTGAGTCATCTTTACCACAAGTCAGTCCTTTGTCAAGATGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 |
||
| CDS-3UTR CCA 90 bp | ATTCATCTTGACAAAGGACTGACTTGTGGTAAAGATGACTCAATCTTGACAGTAACTTTCTGCTGTTCTTaGAGCTTTCTGGCCCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IHLDKGLTCGKDDSILTVTFCCS*SFLAQE Trigger: TTCTTGGGCCAGAAAGCTCCAAGAACAGCAGAAAGT...TACTGTCAAGATTGAGTCATCTTTACCACAAGTCAGTCCTTTGTCAAGATGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 |
||
| CDS-3UTR GCA 90 bp | GCAGATTTACAGGAGGGAAAGAAACCGCACACTTCCTTTATCACAAAGCAAAGTAACCATTGTTTTATTTaGAGACACCGACTTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ADLQEGKKPHTSFITKQSNHCFI*RHRLLF Trigger: AAACAGAAGTCGGTGTCTGCAAATAAAACAATGGTT...ACTTTGCTTTGTGATAAAGGAAGTGTGCGGTTTCTTTCCCTCCTGTAAATCTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 |
||
| CDS-3UTR CCA 90 bp | TTAGCACAACAACAAGAACAACGAAACCTTCAAAGAAATGTTCAGGACACATACTTGTTTTCAATCCTCTaGGCTACTTTCTGCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LAQQQEQRNLQRNVQDTYLFSIL*ATFCCS Trigger: AGAACAGCAGAAAGTAGCCCAGAGGATTGAAAACAA...GTATGTGTCCTGAACATTTCTTTGAAGGTTTCGTTGTTCTTGTTGTTGTGCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 |
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| CDS-3UTR GCA 90 bp | AACAACAAGAACAACGAAACCTTCAAAGAAATGTTCAGGACACATACATCTGCAAACCATTGTTTTATTTaGAGACACCGACTTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NNKNNETFKEMFRTHTSANHCFI*RHRLLF Trigger: AAACAGAAGTCGGTGTCTGCAAATAAAACAATGGTT...TGCAGATGTATGTGTCCTGAACATTTCTTTGAAGGTTTCGTTGTTCTTGTTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 |
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| CDS GCA 90 bp | GGCTCCTCTGTTTACAGCCCTCCTGCAGGGTTTCCTTCCTCCGTTTaGTGGCCTGAAGCCAGTTCCCATCCTCGTTCTCAGCTGCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: GSSVYSPPAGFPSSV*WPEASSHPRSQLHP Trigger: AGGATGCAGCTGAGAACGAGGATGGGAACTGGCTTCAGGCCAGCAAACGGAGGAAGGAAACCCTGCAGGAGGGCTGTAAACAGAGGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 ENSMUST00000141167.2 ENSMUST00000144653.8 |
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| CDS GCA 90 bp | CCTCCGTTTGCTGGCCTGAAGCCAGTTCCCATCCTCGTTCTCAGCTaGATCCTTCTCATCAGCTGCTTCTGCTTCAAACTGCTGGGACGT | + |
|
Preference number: 5 (lower is better) Translates to: PPFAGLKPVPILVLS*ILLISCFCFKLLGR Trigger: ACGTCCCAGCAGTTTGAAGCAGAAGCAGCTGATGAGAAGGATGCAGCTGAGAACGAGGATGGGAACTGGCTTCAGGCCAGCAAACGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 ENSMUST00000141167.2 ENSMUST00000144653.8 |
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| CDS GCA 90 bp | CCACGCCTCCCACGAGTGTGGGTTACGCTTGACAGCCATCTCTGCTaGATGGACTGCTGGAAACATTTCATGAAGAGACAGCAGGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: PRLPRVWVTLDSHLC*MDCWKHFMKRQQDL Trigger: CAGGTCCTGCTGTCTCTTCATGAAATGTTTCCAGCAGTCCATGCAGCAGAGATGGCTGTCAAGCGTAACCCACACTCGTGGGAGGCGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 ENSMUST00000144653.8 |
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| CDS GCA 90 bp | CCACGCCTCCCACGAGTGTGGGTTACGCTTGACAGCCATCTCTGCTaGATGGACTGCTGGAAACATTTCATGAAGAGACAGCAGGACCGT | + |
|
Preference number: 5 (lower is better) Translates to: PRLPRVWVTLDSHLC*MDCWKHFMKRQQDR Trigger: ACGGTCCTGCTGTCTCTTCATGAAATGTTTCCAGCAGTCCATGCAGCAGAGATGGCTGTCAAGCGTAACCCACACTCGTGGGAGGCGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081640.12 |
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| CDS CCA 90 bp | TCCTCTGTTTACAGCCCTCCTGCAGGGTTTCCTTCCTCCGTTTGCTaGCCTGAAGCCAGTTCCCATCCTCGTTCTCAGCTGCATCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSVYSPPAGFPSSVC*PEASSHPRSQLHPS Trigger: AGAAGGATGCAGCTGAGAACGAGGATGGGAACTGGCTTCAGGCCAGCAAACGGAGGAAGGAAACCCTGCAGGAGGGCTGTAAACAGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 ENSMUST00000141167.2 ENSMUST00000144653.8 |
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| CDS TCA 90 bp | TGTTTACAGCCCTCCTGCAGGGTTTCCTTCCTCCGTTTGCTGGCCTaGAGCCAGTTCCCATCCTCGTTCTCAGCTGCATCCTTCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: CLQPSCRVSFLRLLA*SQFPSSFSAASFSS Trigger: TGATGAGAAGGATGCAGCTGAGAACGAGGATGGGAACTGGCTTCAGGCCAGCAAACGGAGGAAGGAAACCCTGCAGGAGGGCTGTAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 ENSMUST00000141167.2 ENSMUST00000144653.8 |
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| CDS GCA 90 bp | TTGCCACGCCTCCCACGAGTGTGGGTTACGCTTGACAGCCATCTCTaGTGCATGGACTGCTGGAAACATTTCATGAAGAGACAGCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LPRLPRVWVTLDSHL*CMDCWKHFMKRQQD Trigger: GTCCTGCTGTCTCTTCATGAAATGTTTCCAGCAGTCCATGCAGCAGAGATGGCTGTCAAGCGTAACCCACACTCGTGGGAGGCGTGGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 ENSMUST00000144653.8 |
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| CDS GCA 90 bp | GTTCCCATCCTCGTTCTCAGCTGCATCCTTCTCATCAGCTGCTTCTaGTTCAAACTGCTGGGACGTGGCCTTGGATACCTTCTCGCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: VPILVLSCILLISCF*FKLLGRGLGYLLAN Trigger: ATTGGCGAGAAGGTATCCAAGGCCACGTCCCAGCAGTTTGAAGCAGAAGCAGCTGATGAGAAGGATGCAGCTGAGAACGAGGATGGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 ENSMUST00000141167.2 ENSMUST00000144653.8 |
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| CDS GCA 90 bp | AAGCCAGTTCCCATCCTCGTTCTCAGCTGCATCCTTCTCATCAGCTaGTTCTGCTTCAAACTGCTGGGACGTGGCCTTGGATACCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KPVPILVLSCILLIS*FCFKLLGRGLGYLL Trigger: GAGAAGGTATCCAAGGCCACGTCCCAGCAGTTTGAAGCAGAAGCAGCTGATGAGAAGGATGCAGCTGAGAACGAGGATGGGAACTGGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 ENSMUST00000141167.2 ENSMUST00000144653.8 |
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| CDS CCA 90 bp | CCTTCTCATCAGCTGCTTCTGCTTCAAACTGCTGGGACGTGGCCTTaGATACCTTCTCGCCAATTCTCCTCTTCCACCCAAAGGAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PSHQLLLLQTAGTWP*IPSRQFSSSTQRKP Trigger: TGGCTTCCTTTGGGTGGAAGAGGAGAATTGGCGAGAAGGTATCCAAGGCCACGTCCCAGCAGTTTGAAGCAGAAGCAGCTGATGAGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 ENSMUST00000141167.2 ENSMUST00000144653.8 |
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| CDS CCA 90 bp | CGAGTGTGGGTTACGCTTGACAGCCATCTCTGCTGCATGGACTGCTaGAAACATTTCATGAAGAGACAGCAGGACCGTTTGTTTTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RVWVTLDSHLCCMDC*KHFMKRQQDRLFSA Trigger: GGCTGAAAACAAACGGTCCTGCTGTCTCTTCATGAAATGTTTCCAGCAGTCCATGCAGCAGAGATGGCTGTCAAGCGTAACCCACACTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081640.12 |
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| CDS GCA 90 bp | CCACGAGTGTGGGTTACGCTTGACAGCCATCTCTGCTGCATGGACTaGTGGAAACATTTCATGAAGAGACAGCAGGACCGTTTGTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PRVWVTLDSHLCCMD*WKHFMKRQQDRLFS Trigger: TGAAAACAAACGGTCCTGCTGTCTCTTCATGAAATGTTTCCAGCAGTCCATGCAGCAGAGATGGCTGTCAAGCGTAACCCACACTCGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081640.12 |
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| CDS-3UTR CAA 90 bp | GCACACTTCCTTTATCACAAAGCAAAGTCTCCATGTCGGCACTGTAGTAACACGGAGTGTGGGTTACGCTaGACAGCCATCTCTGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: AHFLYHKAKSPCRHCSNTECGLR*TAISAA Trigger: TGCAGCAGAGATGGCTGTCAAGCGTAACCCACACTC...CGTGTTACTACAGTGCCGACATGGAGACTTTGCTTTGTGATAAAGGAAGTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
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| CDS-3UTR CAA 90 bp | CACACTTCCTTTATCACAAAGCAAAGTCTCCATGTCGGCACTGTAGTAACACGCGAGTGTGGGTTACGCTaGACAGCCATCTCTGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: HTSFITKQSLHVGTVVTRECGLR*TAISAA Trigger: TGCAGCAGAGATGGCTGTCAAGCGTAACCCACACTC...GCGTGTTACTACAGTGCCGACATGGAGACTTTGCTTTGTGATAAAGGAAGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
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| CDS CCA 90 bp | TTTCATGAAGAGACAGCAGGACCTGTGATTTCATCTCATAAAGGGTaGCATCACCTGGGGTTAGCTGTAGTGCTTCATCCCACTTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: FHEETAGPVISSHKG*HHLGLAVVLHPTSE Trigger: TTCAGAAGTGGGATGAAGCACTACAGCTAACCCCAGGTGATGCCACCCTTTATGAGATGAAATCACAGGTCCTGCTGTCTCTTCATGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 ENSMUST00000141167.2 ENSMUST00000144653.8 |
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| CDS-3UTR CAA 90 bp | AAACCGCACACTTCCTTTATCACAAAGCAAAGTCTCCATGTCGGCACTGTAGTATTCATCCTTCAGCTGTaGGCTCCTCTGTTTACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KPHTSFITKQSLHVGTVVFILQL*APLFTA Trigger: GGCTGTAAACAGAGGAGCCAACAGCTGAAGGATGAA...TACTACAGTGCCGACATGGAGACTTTGCTTTGTGATAAAGGAAGTGTGCGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
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| CDS-3UTR CAA 90 bp | CGGATATATGTGCAGGGCTATTTGAAAGCTTCGAATTGCCAGAACTATCTCTCCTTCATCCTTCAGCTGTaGGCTCCTCTGTTTACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RIYVQGYLKASNCQNYLSFILQL*APLFTA Trigger: GGCTGTAAACAGAGGAGCCAACAGCTGAAGGATGAA...GGAGAGATAGTTCTGGCAATTCGAAGCTTTCAAATAGCCCTGCACATATATCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081640.12 |
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| CDS-3UTR CAA 90 bp | ACCGCACACTTCCTTTATCACAAAGCAAAGTCTCCATGTCGGCACTGTAGTAACTATGTGCAGGGCTATTaGAAAGCTTCGAATTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TAHFLYHKAKSPCRHCSNYVQGY*KASNCQ Trigger: CTGGCAATTCGAAGCTTTCAAATAGCCCTGCACATA...GTTACTACAGTGCCGACATGGAGACTTTGCTTTGTGATAAAGGAAGTGTGCGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 |
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| CDS-3UTR CAA 90 bp | AAAAATGGGAGAATGACAACAGCAGATTTACAGGAGGGAAAGAAACCGCACACTTCCGGGGGCATTTCTTaGTTTTCAATCCTCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KNGRMTTADLQEGKKPHTSGGIS*FSILWA Trigger: AGCCCAGAGGATTGAAAACAAAGAAATGCCCCCGGA...AGTGTGCGGTTTCTTTCCCTCCTGTAAATCTGCTGTTGTCATTCTCCCATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 |
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| CDS-3UTR CAA 90 bp | AGCACAACAACAAGAACAACGAAACCTTCAAAGAAATGTTCAGGACACATACATGAGTGTGGGTTACGCTaGACAGCCATCTCTGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: STTTRTTKPSKKCSGHIHECGLR*TAISAA Trigger: TGCAGCAGAGATGGCTGTCAAGCGTAACCCACACTC...ATGTATGTGTCCTGAACATTTCTTTGAAGGTTTCGTTGTTCTTGTTGTTGTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
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| CDS-3UTR CAA 90 bp | ATCTCTGACACACCAGTATCCAGTTATCAAGTCCTGAAGAAGACAGTTAGCACTTATGTGCAGGGCTATTaGAAAGCTTCGAATTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ISDTPVSSYQVLKKTVSTYVQGY*KASNCQ Trigger: CTGGCAATTCGAAGCTTTCAAATAGCCCTGCACATA...AGTGCTAACTGTCTTCTTCAGGACTTGATAACTGGATACTGGTGTGTCAGAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 |
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| CDS-3UTR CAA 90 bp | TTAGCACAACAACAAGAACAACGAAACCTTCAAAGAAATGTTCAGGACACATACTTCATCCTTCAGCTGTaGGCTCCTCTGTTTACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LAQQQEQRNLQRNVQDTYFILQL*APLFTA Trigger: GGCTGTAAACAGAGGAGCCAACAGCTGAAGGATGAA...GTATGTGTCCTGAACATTTCTTTGAAGGTTTCGTTGTTCTTGTTGTTGTGCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 |
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| CDS-3UTR CAA 90 bp | GCCATTCATCTTGACAAAGGACTGACTTGTGGTAAAGATGACTCAATCTTGACACATCCCACTTCTGAATaGCCTCCTTGTATCGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: AIHLDKGLTCGKDDSILTHPTSE*PPCIVC Trigger: ACAAACGATACAAGGAGGCAATTCAGAAGTGGGATG...TGTCAAGATTGAGTCATCTTTACCACAAGTCAGTCCTTTGTCAAGATGAATGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 |
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| CDS-3UTR CAA 90 bp | AGCACAACAACAAGAACAACGAAACCTTCAAAGAAATGTTCAGGACACATACATTCCGGGGGCATTTCTTaGTTTTCAATCCTCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: STTTRTTKPSKKCSGHIHSGGIS*FSILWA Trigger: AGCCCAGAGGATTGAAAACAAAGAAATGCCCCCGGA...ATGTATGTGTCCTGAACATTTCTTTGAAGGTTTCGTTGTTCTTGTTGTTGTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 |
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| CDS-3UTR CAA 90 bp | ACTATTCAAGAACACACTTTCCAAACTGTGCCTTTAAGGGTACTTTCCCATACACATCCCACTTCTGAATaGCCTCCTTGTATCGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: TIQEHTFQTVPLRVLSHTHPTSE*PPCIVC Trigger: ACAAACGATACAAGGAGGCAATTCAGAAGTGGGATG...TGTATGGGAAAGTACCCTTAAAGGCACAGTTTGGAAAGTGTGTTCTTGAATAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 |
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| CDS TCA 72 bp | AAGTTTGCCACGCCTCCCACGAGTGTGGGTTACGCTTaGCAGCCATCTCTGCTGCATGGACTGCTGGAAACA | + |
|
Preference number: 6 (lower is better) Translates to: KFATPPTSVGYA*QPSLLHGLLET Trigger: TGTTTCCAGCAGTCCATGCAGCAGAGATGGCTGTCAAGCGTAACCCACACTCGTGGGAGGCGTGGCAAACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 ENSMUST00000144653.8 |
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| CDS GCA 72 bp | CCCATCCTCGTTCTCAGCTGCATCCTTCTCATCAGCTaGTTCTGCTTCAAACTGCTGGGACGTGGCCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PILVLSCILLIS*FCFKLLGRGLG Trigger: TCCAAGGCCACGTCCCAGCAGTTTGAAGCAGAAGCAGCTGATGAGAAGGATGCAGCTGAGAACGAGGATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 ENSMUST00000141167.2 ENSMUST00000144653.8 |
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| CDS CAA 90 bp | TCCTTCTCATCAGCTGCTTCTGCTTCAAACTGCTGGGACGTGGCCTaGGATACCTTCTCGCCAATTCTCCTCTTCCACCCAAAGGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SFSSAASASNCWDVA*DTFSPILLFHPKEA Trigger: GGCTTCCTTTGGGTGGAAGAGGAGAATTGGCGAGAAGGTATCCAAGGCCACGTCCCAGCAGTTTGAAGCAGAAGCAGCTGATGAGAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 ENSMUST00000141167.2 ENSMUST00000144653.8 |
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| CDS CCA 72 bp | TCTCATCAGCTGCTTCTGCTTCAAACTGCTGGGACGTaGCCTTGGATACCTTCTCGCCAATTCTCCTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SHQLLLLQTAGT*PWIPSRQFSSS Trigger: GGAAGAGGAGAATTGGCGAGAAGGTATCCAAGGCCACGTCCCAGCAGTTTGAAGCAGAAGCAGCTGATGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 ENSMUST00000141167.2 ENSMUST00000144653.8 |
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| CDS GCA 72 bp | CTCCCACGAGTGTGGGTTACGCTTGACAGCCATCTCTaGTGCATGGACTGCTGGAAACATTTCATGAAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LPRVWVTLDSHL*CMDCWKHFMKR Trigger: TCTCTTCATGAAATGTTTCCAGCAGTCCATGCAGCAGAGATGGCTGTCAAGCGTAACCCACACTCGTGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022751.15 ENSMUST00000081640.12 ENSMUST00000118193.8 ENSMUST00000144653.8 |
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| CDS CCA 72 bp | GAGACAGCAGGACCTGTGATTTCATCTCATAAAGGGTaGCATCACCTGGGGTTAGCTGTAGTGCTTCATCCC | + |
|
Preference number: 6 (lower is better) Translates to: ETAGPVISSHKG*HHLGLAVVLHP Trigger: GGGATGAAGCACTACAGCTAACCCCAGGTGATGCCACCCTTTATGAGATGAAATCACAGGTCCTGCTGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 ENSMUST00000141167.2 ENSMUST00000144653.8 |
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| CDS TCA 72 bp | TCACCTGGGGTTAGCTGTAGTGCTTCATCCCACTTCTaGATTGCCTCCTTGTATCGTTTGTTTTCAGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SPGVSCSASSHF*IASLYRLFSAS Trigger: GCTGGCTGAAAACAAACGATACAAGGAGGCAATTCAGAAGTGGGATGAAGCACTACAGCTAACCCCAGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 ENSMUST00000141167.2 ENSMUST00000144653.8 |
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| CDS TCA 72 bp | TGCTGGAAACATTTCATGAAGAGACAGCAGGACCTGTaGTTTCATCTCATAAAGGGTGGCATCACCTGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: CWKHFMKRQQDL*FHLIKGGITWG Trigger: ACCCCAGGTGATGCCACCCTTTATGAGATGAAATCACAGGTCCTGCTGTCTCTTCATGAAATGTTTCCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 ENSMUST00000141167.2 ENSMUST00000144653.8 |
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| CDS CAA 90 bp | CAGGGTTCATCGGATATATGTGCAGGGCTATTTGAAAGCTTCGAATaGCCAGAACTATCTCTCCTAATCCAAGCTGAGCTCGACCTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: QGSSDICAGLFESFE*PELSLLIQAELDLK Trigger: CTTTAGGTCGAGCTCAGCTTGGATTAGGAGAGATAGTTCTGGCAATTCGAAGCTTTCAAATAGCCCTGCACATATATCCGATGAACCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022751.15 ENSMUST00000118193.8 ENSMUST00000144653.8 |
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