Pregenerated sensors for TTC26 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056832Ensembl transcript IDs: ENSMUST00000159145.8, ENSMUST00000160215.2, ENSMUST00000161751.8, ENSMUST00000162554.8
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGAGGGTCTCTTTGGGTTCTCTCCCAGCTAAGATCATCTGGAAGATaGCCACACAGGCACCCCTCTTGCCTTCCCAGTACTCAGGGTTGG | + |
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Preference number: 1 (lower is better) Translates to: GGSLWVLSQLRSSGR*PHRHPSCLPSTQGW Trigger: CCAACCCTGAGTACTGGGAAGGCAAGAGGGGTGCCTGTGTGGGCATCTTCCAGATGATCTTAGCTGGGAGAGAACCCAAAGAGACCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| 3UTR GCA 90 bp | TTGCTTCAGCTGTTTTACTCTGTACAGGTTTCCCTCTCCTTTCTGTaGAGAACTCCCATCTGCCATCTGCAGCAGGAGGCTGGGAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: LLQLFYSVQVSLSFL*RTPICHLQQEAGKE Trigger: TTCCTTCCCAGCCTCCTGCTGCAGATGGCAGATGGGAGTTCTGCACAGAAAGGAGAGGGAAACCTGTACAGAGTAAAACAGCTGAAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
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| 3UTR CCA 90 bp | GGAACACCTTGGGACTGGCTAGAGATGAAGGCTGTGTTCAGCCTCTaGTCCTGTTGCTTCAGCTGTTTTACTCTGTACAGGTTTCCCTCT | + |
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Preference number: 1 (lower is better) Translates to: GTPWDWLEMKAVFSL*SCCFSCFTLYRFPS Trigger: AGAGGGAAACCTGTACAGAGTAAAACAGCTGAAGCAACAGGACCAGAGGCTGAACACAGCCTTCATCTCTAGCCAGTCCCAAGGTGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
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| 3UTR TCA 90 bp | GTAGATTACATTGGGTGTCAGCAGGCCAGGGAGATTCCTGTTGCCTaGTGCCTAAGTCCACACATACCACCCACTCATCCTAATGCTCTA | + |
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Preference number: 1 (lower is better) Translates to: VDYIGCQQAREIPVA*CLSPHIPPTHPNAL Trigger: TAGAGCATTAGGATGAGTGGGTGGTATGTGTGGACTTAGGCATCAGGCAACAGGAATCTCCCTGGCCTGCTGACACCCAATGTAATCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
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| 3UTR CCA 90 bp | AGATGCCCACACAGGCACCCCTCTTGCCTTCCCAGTACTCAGGGTTaGGATCCAGTCTTTCTAAGACATCAAAAGCTTTGGCTGAATAGT | + |
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Preference number: 1 (lower is better) Translates to: RCPHRHPSCLPSTQG*DPVFLRHQKLWLNS Trigger: ACTATTCAGCCAAAGCTTTTGATGTCTTAGAAAGACTGGATCCCAACCCTGAGTACTGGGAAGGCAAGAGGGGTGCCTGTGTGGGCATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| 3UTR TCA 90 bp | CCTGGATTGCATATTCAAGTGCAAGAAAACAGTTCCAATTTGACGTaGGAGGAAGCTGGTCCTGGCCTAGGGTTTGGCTGCTTAGATGGG | + |
|
Preference number: 1 (lower is better) Translates to: PGLHIQVQENSSNLT*EEAGPGLGFGCLDG Trigger: CCCATCTAAGCAGCCAAACCCTAGGCCAGGACCAGCTTCCTCTCACGTCAAATTGGAACTGTTTTCTTGCACTTGAATATGCAATCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| 3UTR GCA 90 bp | CTGATGATATACTCCACTTGGGTGTTTCCTGTGCTTCTCAGTAAATaGAGCACTTCTCGGAGGGTCTCTTTGGGTTCTCTCCCAGCTAAG | + |
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Preference number: 1 (lower is better) Translates to: LMIYSTWVFPVLLSK*STSRRVSLGSLPAK Trigger: CTTAGCTGGGAGAGAACCCAAAGAGACCCTCCGAGAAGTGCTGCATTTACTGAGAAGCACAGGAAACACCCAAGTGGAGTATATCATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| 3UTR TCA 90 bp | CATCATAGTAATCCAGTTTGTAGTAGCAGAGGGCCACATACACATTaGGGGCCAGGTATTCCCTGTTGTCCAGCAGGATCCGCTTGTATA | + |
|
Preference number: 1 (lower is better) Translates to: HHSNPVCSSRGPHTH*GPGIPCCPAGSACI Trigger: TATACAAGCGGATCCTGCTGGACAACAGGGAATACCTGGCCCTCAATGTGTATGTGGCCCTCTGCTACTACAAACTGGATTACTATGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000160215.2 |
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| 3UTR TCA 90 bp | CAAGCTACTCACAGAGAGTGGTCTCATAAGCTAACTAACTACTACTaGCTGCTGTTTGGTAGAGGGCCTCATGGCCATCCTCAGAATCAC | + |
|
Preference number: 1 (lower is better) Translates to: QATHREWSHKLTNYY*LLFGRGPHGHPQNH Trigger: GTGATTCTGAGGATGGCCATGAGGCCCTCTACCAAACAGCAGTCAGTAGTAGTTAGTTAGCTTATGAGACCACTCTCTGTGAGTAGCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
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| 3UTR CCA 90 bp | TTCTCCTTGGCCCACTTCTTCATGATCCTGATGATATACTCCACTTaGGTGTTTCCTGTGCTTCTCAGTAAATGCAGCACTTCTCGGAGG | + |
|
Preference number: 1 (lower is better) Translates to: FSLAHFFMILMIYST*VFPVLLSKCSTSRR Trigger: CCTCCGAGAAGTGCTGCATTTACTGAGAAGCACAGGAAACACCCAAGTGGAGTATATCATCAGGATCATGAAGAAGTGGGCCAAGGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| 3UTR CCA 90 bp | TATTCAAGTGCAAGAAAACAGTTCCAATTTGACGTGAGAGGAAGCTaGTCCTGGCCTAGGGTTTGGCTGCTTAGATGGGCACTCTATTCT | + |
|
Preference number: 1 (lower is better) Translates to: YSSARKQFQFDVRGS*SWPRVWLLRWALYS Trigger: AGAATAGAGTGCCCATCTAAGCAGCCAAACCCTAGGCCAGGACCAGCTTCCTCTCACGTCAAATTGGAACTGTTTTCTTGCACTTGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| 3UTR GCA 90 bp | AAGACAAGAAGCTCTGGCATAAGGAAATGGTGCAGTTTTGTTTCCTaGAGTTCTGTTAGACCAGTACTGTGTTTTGTGCTTTGGCCCAAT | + |
|
Preference number: 1 (lower is better) Translates to: KTRSSGIRKWCSFVS*SSVRPVLCFVLWPN Trigger: ATTGGGCCAAAGCACAAAACACAGTACTGGTCTAACAGAACTGCAGGAAACAAAACTGCACCATTTCCTTATGCCAGAGCTTCTTGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
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| 3UTR GCA 90 bp | AGGGAACACCAGAACAAGACAAGAAGCTCTGGCATAAGGAAATGGTaGAGTTTTGTTTCCTGCAGTTCTGTTAGACCAGTACTGTGTTTT | + |
|
Preference number: 1 (lower is better) Translates to: REHQNKTRSSGIRKW*SFVSCSSVRPVLCF Trigger: AAAACACAGTACTGGTCTAACAGAACTGCAGGAAACAAAACTGCACCATTTCCTTATGCCAGAGCTTCTTGTCTTGTTCTGGTGTTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
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| 3UTR TCA 90 bp | GTATATATCAATAGCTTCTTGGTAATGGGATCGCATGTAGTGGATTaGGGCCAAACTAAGCTGGTCTTCCTTGATATCCTGAAGATTCTG | + |
|
Preference number: 1 (lower is better) Translates to: VYINSFLVMGSHVVD*GQTKLVFLDILKIL Trigger: CAGAATCTTCAGGATATCAAGGAAGACCAGCTTAGTTTGGCCTCAATCCACTACATGCGATCCCATTACCAAGAAGCTATTGATATATAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000160215.2 |
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| 3UTR GCA 90 bp | GATATGATGGAGAGGCTAGCCATTAGGAGGTCTCTTCAAAGGACCTaGTTTATACTTGTATCAATAAATCCCTACGATGTGTTCATGTGT | + |
|
Preference number: 1 (lower is better) Translates to: DMMERLAIRRSLQRT*FILVSINPYDVFMC Trigger: ACACATGAACACATCGTAGGGATTTATTGATACAAGTATAAAGCAGGTCCTTTGAAGAGACCTCCTAATGGCTAGCCTCTCCATCATATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
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| 3UTR CCA 90 bp | TGTTCAAAATTGCTGTTCATTCAGAAGATAGTAAGAACCCTGCCCTaGCTTTGTTTCCTAAAATACAAGGGAGACCTAACTCTGAGACTT | + |
|
Preference number: 1 (lower is better) Translates to: CSKLLFIQKIVRTLP*LCFLKYKGDLTLRL Trigger: AAGTCTCAGAGTTAGGTCTCCCTTGTATTTTAGGAAACAAAGCCAGGGCAGGGTTCTTACTATCTTCTGAATGAACAGCAATTTTGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
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| 3UTR CAA 90 bp | CTCCCAGCTAAGATCATCTGGAAGATGCCCACACAGGCACCCCTCTaGCCTTCCCAGTACTCAGGGTTGGGATCCAGTCTTTCTAAGACA | + |
|
Preference number: 2 (lower is better) Translates to: LPAKIIWKMPTQAPL*PSQYSGLGSSLSKT Trigger: TGTCTTAGAAAGACTGGATCCCAACCCTGAGTACTGGGAAGGCAAGAGGGGTGCCTGTGTGGGCATCTTCCAGATGATCTTAGCTGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCTAGAGATGAAGGCTGTGTTCAGCCTCTGGTCCTGTTGCTTCAGCTGTTTTTCCTGGCCTAGGGTTTaGCTGCTTAGATGGGCACTC | + |
|
Preference number: 2 (lower is better) Translates to: WLEMKAVFSLWSCCFSCFSWPRV*LLRWAL Trigger: GAGTGCCCATCTAAGCAGCCAAACCCTAGGCCAGGA...AAAACAGCTGAAGCAACAGGACCAGAGGCTGAACACAGCCTTCATCTCTAGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTTTGCCGTTATAAAGGCGAAAGTGATTGCAGGCCTTAAGGTTGAGGGCGATGGGCCACATACACATTaGGGGCCAGGTATTCCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: CFAVIKAKVIAGLKVEGDGPHTH*GPGIPC Trigger: ACAGGGAATACCTGGCCCTCAATGTGTATGTGGCCC...ATCGCCCTCAACCTTAAGGCCTGCAATCACTTTCGCCTTTATAACGGCAAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000160215.2 |
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| 3UTR-3UTR GCA 90 bp | ATATCTGATCCTAATGTAAAAGATGGCACACTGGCCATCTTCTCGGGAAGACTTCCACCTCCTCCTCTGTaGAGTCCCTGCTCTATGAGG | + |
|
Preference number: 2 (lower is better) Translates to: ISDPNVKDGTLAIFSGRLPPPPL*SPCSMR Trigger: CCTCATAGAGCAGGGACTGCACAGAGGAGGAGGTGG...AAGTCTTCCCGAGAAGATGGCCAGTGTGCCATCTTTTACATTAGGATCAGATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGGTTTAGTCATATCTGATCCACCTAGTACCTTTGGCAAAGAGAACCAGGTGTCCCTCTCCTTTCTGTaGAGAACTCCCATCTGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: AGLVISDPPSTFGKENQVSLSFL*RTPICH Trigger: ATGGCAGATGGGAGTTCTGCACAGAAAGGAGAGGGA...CACCTGGTTCTCTTTGCCAAAGGTACTAGGTGGATCAGATATGACTAAACCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
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| 3UTR CAA 90 bp | GATGGTACTGTCAGGAATCTGCTGAAGGTAAACAGCCAGGACTTCTaGAGACACATCATAGTAATCCAGTTTGTAGTAGCAGAGGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: DGTVRNLLKVNSQDF*RHIIVIQFVVAEGH Trigger: GTGGCCCTCTGCTACTACAAACTGGATTACTATGATGTGTCTCAAGAAGTCCTGGCTGTTTACCTTCAGCAGATTCCTGACAGTACCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000160215.2 |
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| 3UTR-3UTR TCA 90 bp | TGGCTAGAGATGAAGGCTGTGTTCAGCCTCTGGTCCTGTTGCTTCAGCTGTTTTATCAAAAGCTTTGGCTaGATAGTAGAACTGGCCCAT | + |
|
Preference number: 2 (lower is better) Translates to: WLEMKAVFSLWSCCFSCFIKSFG*IVELAH Trigger: ATGGGCCAGTTCTACTATTCAGCCAAAGCTTTTGAT...AAAACAGCTGAAGCAACAGGACCAGAGGCTGAACACAGCCTTCATCTCTAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGTTCAGCCTCTGGTCCTGTTGCTTCAGCTGTTTTACTCTGTACAGGTTTCCGATCCTCCTACCAACTaGAAAAACTGCTGGGCAATT | + |
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Preference number: 2 (lower is better) Translates to: CVQPLVLLLQLFYSVQVSDPPTN*KNCWAI Trigger: AATTGCCCAGCAGTTTTTCCAGTTGGTAGGAGGATC...GGAAACCTGTACAGAGTAAAACAGCTGAAGCAACAGGACCAGAGGCTGAACACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGAACACCAGAACAAGACAAGAAGCTCTGGCATAAGGAAATGGTGCAGTTTTGAGATTCCTGTTGCCTaGTGCCTAAGTCCACACATA | + |
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Preference number: 2 (lower is better) Translates to: REHQNKTRSSGIRKWCSFEIPVA*CLSPHI Trigger: TATGTGTGGACTTAGGCATCAGGCAACAGGAATCTC...AAAACTGCACCATTTCCTTATGCCAGAGCTTCTTGTCTTGTTCTGGTGTTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
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| 3UTR CAA 90 bp | TTGTGCCTGATGAGTTCTTTAGCAAATTCAAAGGGTGAAGATGCATaGTCCATCAAGCTTTTGAGCTCTGCCTCAGCTGCTTTGCCGTTA | + |
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Preference number: 2 (lower is better) Translates to: LCLMSSLANSKGEDA*SIKLLSSASAALPL Trigger: TAACGGCAAAGCAGCTGAGGCAGAGCTCAAAAGCTTGATGGACAATGCATCTTCACCCTTTGAATTTGCTAAAGAACTCATCAGGCACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| 3UTR CAA 90 bp | CCCTTCTTTTCCAGGCTGTCATCTGTGAGAGAACACAGTACGAACTaGATGCCCTGTCAAGACAATCAGAAACAATTATCCCTCCTAACA | + |
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Preference number: 2 (lower is better) Translates to: PFFSRLSSVREHSTN*MPCQDNQKQLSLLT Trigger: TGTTAGGAGGGATAATTGTTTCTGATTGTCTTGACAGGGCATCAAGTTCGTACTGTGTTCTCTCACAGATGACAGCCTGGAAAAGAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTCAAGGAAAATGTCAGAGACTACTAAGTAGTAAACTCACAATGTCTCACGGGCCACATACACATTaGGGGCCAGGTATTCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: FSQGKCQRLLSSKLTMSHGPHTH*GPGIPC Trigger: ACAGGGAATACCTGGCCCTCAATGTGTATGTGGCCC...GTGAGACATTGTGAGTTTACTACTTAGTAGTCTCTGACATTTTCCTTGAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTTGTTTCCTAAAATACAAGGGAGACCTAACTCTGAGACTTACACACCTTCAACTGGTATTGCCTGTTaGAGCTTTGGCTTGGGCATA | + |
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Preference number: 2 (lower is better) Translates to: ALFPKIQGRPNSETYTPSTGIAC*SFGLGI Trigger: TATGCCCAAGCCAAAGCTGCAACAGGCAATACCAGT...TGAAGGTGTGTAAGTCTCAGAGTTAGGTCTCCCTTGTATTTTAGGAAACAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGAACACCAGAACAAGACAAGAAGCTCTGGCATAAGGAAATGGTGCAGTTTTATGATATACTCCACTTaGGTGTTTCCTGTGCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: REHQNKTRSSGIRKWCSFMIYST*VFPVLL Trigger: GAGAAGCACAGGAAACACCCAAGTGGAGTATATCAT...AAAACTGCACCATTTCCTTATGCCAGAGCTTCTTGTCTTGTTCTGGTGTTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAGTCCTATGTTCAAAATTGCTGTTCATTCAGAAGATAGTAAGAACCCTGCCAATCAAGCAGGGTCCTaGATTGCATATTCAAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: PSPMFKIAVHSEDSKNPANQAGS*IAYSSA Trigger: TGCACTTGAATATGCAATCCAGGACCCTGCTTGATT...GGCAGGGTTCTTACTATCTTCTGAATGAACAGCAATTTTGAACATAGGACTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTCTCAAGGAAAATGTCAGAGACTACTAAGTAGTAAACTCACAATGTCTCACACCAGTAGATTACATTaGGTGTCAGCAGGCCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: FSQGKCQRLLSSKLTMSHTSRLH*VSAGQG Trigger: TCCCTGGCCTGCTGACACCCAATGTAATCTACTGGT...GTGAGACATTGTGAGTTTACTACTTAGTAGTCTCTGACATTTTCCTTGAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
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| 3UTR-3UTR GCA 90 bp | TTCTCTCAAGGAAAATGTCAGAGACTACTAAGTAGTAAACTCACAATGTCTCACCTGCCTCAGCTGCTTTaGCGTTATAAAGGCGAAAGT | + |
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Preference number: 2 (lower is better) Translates to: FSQGKCQRLLSSKLTMSHLPQLL*RYKGES Trigger: ACTTTCGCCTTTATAACGGCAAAGCAGCTGAGGCAG...GTGAGACATTGTGAGTTTACTACTTAGTAGTCTCTGACATTTTCCTTGAGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| 3UTR-3UTR GCA 90 bp | GCCCTGGCTTTGTTTCCTAAAATACAAGGGAGACCTAACTCTGAGACTTACACAAAAACAACCAGATTGTaGCTGATGAGTTCTTTAGCA | + |
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Preference number: 2 (lower is better) Translates to: ALALFPKIQGRPNSETYTKTTRL*LMSSLA Trigger: TGCTAAAGAACTCATCAGGCACAATCTGGTTGTTTT...TGTGTAAGTCTCAGAGTTAGGTCTCCCTTGTATTTTAGGAAACAAAGCCAGGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| 3UTR-3UTR GCA 90 bp | CCCAGTCCTATGTTCAAAATTGCTGTTCATTCAGAAGATAGTAAGAACCCTGCCACACACCTTCAGAGATaGCAAGTTTTTCCTTTCACT | + |
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Preference number: 2 (lower is better) Translates to: PSPMFKIAVHSEDSKNPATHLQR*QVFPFT Trigger: AGTGAAAGGAAAAACTTGGCATCTCTGAAGGTGTGT...GGCAGGGTTCTTACTATCTTCTGAATGAACAGCAATTTTGAACATAGGACTGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
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| 3UTR-3UTR CCA 90 bp | TATAAACAGGTACGTATGCTGAGCAGTGGTGCACACATCTTTGATACGAGCACTTTCAGTTTCTCACTTTaGATCAAGAGGAAAACCTCT | + |
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Preference number: 2 (lower is better) Translates to: YKQVRMLSSGAHIFDTSTFSFSL*IKRKTS Trigger: AGAGGTTTTCCTCTTGATCCAAAGTGAGAAACTGAA...AGTGCTCGTATCAAAGATGTGTGCACCACTGCTCAGCATACGTACCTGTTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| 3UTR CAA 90 bp | AAAATTGCTGTTCATTCAGAAGATAGTAAGAACCCTGCCCTGGCTTaGTTTCCTAAAATACAAGGGAGACCTAACTCTGAGACTTACACA | + |
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Preference number: 2 (lower is better) Translates to: KIAVHSEDSKNPALA*FPKIQGRPNSETYT Trigger: TGTGTAAGTCTCAGAGTTAGGTCTCCCTTGTATTTTAGGAAACAAAGCCAGGGCAGGGTTCTTACTATCTTCTGAATGAACAGCAATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTACTGTGTTTTGTGCTTTGGCCCAATCATATCTGATCCTAATGTAAAAGATCTAACTAACTACTACTaGCTGCTGTTTGGTAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: QYCVLCFGPIISDPNVKDLTNYY*LLFGRG Trigger: CCCTCTACCAAACAGCAGTCAGTAGTAGTTAGTTAG...ATCTTTTACATTAGGATCAGATATGATTGGGCCAAAGCACAAAACACAGTACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
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| 3UTR CAA 90 bp | GAAAACCTCTTCACCCTCACTGGTATTGCCTGTTGCAGCTTTGGCTaGGGCATAATTAAAGTTAAAGATGTCATCATTATAGAAGTAACT | + |
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Preference number: 2 (lower is better) Translates to: ENLFTLTGIACCSFG*GIIKVKDVIIIEVT Trigger: AGTTACTTCTATAATGATGACATCTTTAACTTTAATTATGCCCAAGCCAAAGCTGCAACAGGCAATACCAGTGAGGGTGAAGAGGTTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| 3UTR-3UTR TCA 90 bp | CCTACAGAAGAAAATTACAGAGCATACAAACAAGCAGGTAATCTGATACACAAACAGAGGTTTCCATCTTaGGATAAAGCTCCCAAGCTA | + |
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Preference number: 2 (lower is better) Translates to: PTEENYRAYKQAGNLIHKQRFPS*DKAPKL Trigger: TAGCTTGGGAGCTTTATCTCAAGATGGAAACCTCTG...TTTGTGTATCAGATTACCTGCTTGTTTGTATGCTCTGTAATTTTCTTCTGTAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTACTGTGTTTTGTGCTTTGGCCCAATCATATCTGATCCTAATGTAAAAGATAGCAAATTCAAAGGGTaGAGATGCATTGTCCATCAA | + |
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Preference number: 2 (lower is better) Translates to: QYCVLCFGPIISDPNVKDSKFKG*RCIVHQ Trigger: TTGATGGACAATGCATCTTCACCCTTTGAATTTGCT...ATCTTTTACATTAGGATCAGATATGATTGGGCCAAAGCACAAAACACAGTACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| 3UTR TCA 72 bp | ATCCCAGCACTCAGGAGGCAGAGGCAGGTGGATTTCTaGGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: IPALRRQRQVDF*VRGQPGLQSEF Trigger: GAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCTGAGTGCTGGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
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| 3UTR CCA 72 bp | TTTGACGTGAGAGGAAGCTGGTCCTGGCCTAGGGTTTaGCTGCTTAGATGGGCACTCTATTCTCCTTGGCCC | + |
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Preference number: 3 (lower is better) Translates to: FDVRGSWSWPRV*LLRWALYSPWP Trigger: GGGCCAAGGAGAATAGAGTGCCCATCTAAGCAGCCAAACCCTAGGCCAGGACCAGCTTCCTCTCACGTCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| 3UTR-3UTR CAA 90 bp | TGGGTGTCAGCAGGCCAGGGAGATTCCTGTTGCCTGATGCCTAAGTCCACACATTGGCCAAGGGCTGCATaGACAACTCCCTTGAGGATA | + |
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Preference number: 3 (lower is better) Translates to: WVSAGQGDSCCLMPKSTHWPRAA*TTPLRI Trigger: TATCCTCAAGGGAGTTGTCAATGCAGCCCTTGGCCA...ATGTGTGGACTTAGGCATCAGGCAACAGGAATCTCCCTGGCCTGCTGACACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| 3UTR TCA 72 bp | ATTGGGTGTCAGCAGGCCAGGGAGATTCCTGTTGCCTaGTGCCTAAGTCCACACATACCACCCACTCATCCT | + |
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Preference number: 3 (lower is better) Translates to: IGCQQAREIPVA*CLSPHIPPTHP Trigger: AGGATGAGTGGGTGGTATGTGTGGACTTAGGCATCAGGCAACAGGAATCTCCCTGGCCTGCTGACACCCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
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| 3UTR TCA 72 bp | CGGGAAGACTTGTCCCAGGACTCAGAGATACAGAGCTaGGGAACACCTTGGGACTGGCTAGAGATGAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: REDLSQDSEIQS*GTPWDWLEMKA Trigger: AGCCTTCATCTCTAGCCAGTCCCAAGGTGTTCCTCAGCTCTGTATCTCTGAGTCCTGGGACAAGTCTTCCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
||
| 3UTR GCA 72 bp | TTACATTGGGTGTCAGCAGGCCAGGGAGATTCCTGTTaGCTGATGCCTAAGTCCACACATACCACCCACTCA | + |
|
Preference number: 3 (lower is better) Translates to: LHWVSAGQGDSC*LMPKSTHTTHS Trigger: TGAGTGGGTGGTATGTGTGGACTTAGGCATCAGGCAACAGGAATCTCCCTGGCCTGCTGACACCCAATGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
||
| 3UTR-3UTR CAA 90 bp | GTACTTGTTACTGCAGGTAGGAGAAAATGTCCTGCCGGGCATGGTGGCACACGCAAGGGTGAAGATGCATaGTCCATCAAGCTTTTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: VLVTAGRRKCPAGHGGTRKGEDA*SIKLLS Trigger: GCTCAAAAGCTTGATGGACAATGCATCTTCACCCTT...GCGTGTGCCACCATGCCCGGCAGGACATTTTCTCCTACCTGCAGTAACAAGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
||
| 3UTR TCA 72 bp | AATCCAGTTTGTAGTAGCAGAGGGCCACATACACATTaGGGGCCAGGTATTCCCTGTTGTCCAGCAGGATCC | + |
|
Preference number: 3 (lower is better) Translates to: NPVCSSRGPHTH*GPGIPCCPAGS Trigger: GGATCCTGCTGGACAACAGGGAATACCTGGCCCTCAATGTGTATGTGGCCCTCTGCTACTACAAACTGGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000160215.2 |
||
| 3UTR GCA 72 bp | CTGTTTTACTCTGTACAGGTTTCCCTCTCCTTTCTGTaGAGAACTCCCATCTGCCATCTGCAGCAGGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LFYSVQVSLSFL*RTPICHLQQEA Trigger: AGCCTCCTGCTGCAGATGGCAGATGGGAGTTCTGCACAGAAAGGAGAGGGAAACCTGTACAGAGTAAAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
||
| 3UTR CCA 72 bp | CACAGGCACCCCTCTTGCCTTCCCAGTACTCAGGGTTaGGATCCAGTCTTTCTAAGACATCAAAAGCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: HRHPSCLPSTQG*DPVFLRHQKLW Trigger: CCAAAGCTTTTGATGTCTTAGAAAGACTGGATCCCAACCCTGAGTACTGGGAAGGCAAGAGGGGTGCCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
||
| 3UTR CCA 72 bp | GCAAGAAAACAGTTCCAATTTGACGTGAGAGGAAGCTaGTCCTGGCCTAGGGTTTGGCTGCTTAGATGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: ARKQFQFDVRGS*SWPRVWLLRWA Trigger: TGCCCATCTAAGCAGCCAAACCCTAGGCCAGGACCAGCTTCCTCTCACGTCAAATTGGAACTGTTTTCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGTGTCAGCAGGCCAGGGAGATTCCTGTTGCCTGATGCCTAAGTCCACACATTTTTCATATGATCCCTaGAACCCATTTCCTGGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: WVSAGQGDSCCLMPKSTHFSYDP*NPFPGQ Trigger: TTGGCCAGGAAATGGGTTCAAGGGATCATATGAAAA...ATGTGTGGACTTAGGCATCAGGCAACAGGAATCTCCCTGGCCTGCTGACACCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
||
| 3UTR-3UTR CAA 90 bp | ATATCTGATCCTAATGTAAAAGATGGCACACTGGCCATCTTCTCGGGAAGACTTACACAGGCACCCCTCTaGCCTTCCCAGTACTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: ISDPNVKDGTLAIFSGRLTQAPL*PSQYSG Trigger: CCCTGAGTACTGGGAAGGCAAGAGGGGTGCCTGTGT...AAGTCTTCCCGAGAAGATGGCCAGTGTGCCATCTTTTACATTAGGATCAGATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
||
| 3UTR CCA 72 bp | AAACAGTTCCAATTTGACGTGAGAGGAAGCTGGTCCTaGCCTAGGGTTTGGCTGCTTAGATGGGCACTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: KQFQFDVRGSWS*PRVWLLRWALY Trigger: ATAGAGTGCCCATCTAAGCAGCCAAACCCTAGGCCAGGACCAGCTTCCTCTCACGTCAAATTGGAACTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
||
| 3UTR TCA 72 bp | CATATTCAAGTGCAAGAAAACAGTTCCAATTTGACGTaGGAGGAAGCTGGTCCTGGCCTAGGGTTTGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: HIQVQENSSNLT*EEAGPGLGFGC Trigger: GCAGCCAAACCCTAGGCCAGGACCAGCTTCCTCTCACGTCAAATTGGAACTGTTTTCTTGCACTTGAATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
||
| 3UTR TCA 72 bp | CACAGAGAGTGGTCTCATAAGCTAACTAACTACTACTaGCTGCTGTTTGGTAGAGGGCCTCATGGCCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: HREWSHKLTNYY*LLFGRGPHGHP Trigger: AGGATGGCCATGAGGCCCTCTACCAAACAGCAGTCAGTAGTAGTTAGTTAGCTTATGAGACCACTCTCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGATCCACCTAGTACCTTTGGCAAAGAGAACCAGGTGCTACTGAAAAAGAGGTCTTCTCGGGAAGACTaGTCCCAGGACTCAGAGATA | + |
|
Preference number: 3 (lower is better) Translates to: SDPPSTFGKENQVLLKKRSSRED*SQDSEI Trigger: TATCTCTGAGTCCTGGGACAAGTCTTCCCGAGAAGA...CCTCTTTTTCAGTAGCACCTGGTTCTCTTTGCCAAAGGTACTAGGTGGATCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
||
| 3UTR-3UTR CAA 90 bp | ATATCTGATCCTAATGTAAAAGATGGCACACTGGCCATCTTCTCGGGAAGACTTTTGCAGGCCTTAAGGTaGAGGGCGATGGTACTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: ISDPNVKDGTLAIFSGRLLQALR*RAMVLS Trigger: TGACAGTACCATCGCCCTCAACCTTAAGGCCTGCAA...AAGTCTTCCCGAGAAGATGGCCAGTGTGCCATCTTTTACATTAGGATCAGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGATCCACCTAGTACCTTTGGCAAAGAGAACCAGGTGCTACTGAAAAAGAGGAACCCTGCCCTGGCTTaGTTTCCTAAAATACAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SDPPSTFGKENQVLLKKRNPALA*FPKIQG Trigger: CCCTTGTATTTTAGGAAACAAAGCCAGGGCAGGGTT...CCTCTTTTTCAGTAGCACCTGGTTCTCTTTGCCAAAGGTACTAGGTGGATCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
||
| 3UTR TCA 72 bp | AGAAGTTTATGTGATGACAGCTCAGAGACACGAGGCTaGGATATGATGGAGAGGCTAGCCATTAGGAGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: RSLCDDSSETRG*DMMERLAIRRS Trigger: AGACCTCCTAATGGCTAGCCTCTCCATCATATCTCAGCCTCGTGTCTCTGAGCTGTCATCACATAAACTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTTGCCGTTATAAAGGCGAAAGTGATTGCAGGCCTTAAGGTTGAGGGCGATAACAGCCAGGACTTCTaGAGACACATCATAGTAATC | + |
|
Preference number: 3 (lower is better) Translates to: CFAVIKAKVIAGLKVEGDNSQDF*RHIIVI Trigger: GATTACTATGATGTGTCTCAAGAAGTCCTGGCTGTT...ATCGCCCTCAACCTTAAGGCCTGCAATCACTTTCGCCTTTATAACGGCAAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000160215.2 |
||
| 3UTR-3UTR CAA 90 bp | ATATCTGATCCTAATGTAAAAGATGGCACACTGGCCATCTTCTCGGGAAGACTTGGCACTCTATTCTCCTaGGCCCACTTCTTCATGATC | + |
|
Preference number: 3 (lower is better) Translates to: ISDPNVKDGTLAIFSGRLGTLFS*AHFFMI Trigger: GATCATGAAGAAGTGGGCCAAGGAGAATAGAGTGCC...AAGTCTTCCCGAGAAGATGGCCAGTGTGCCATCTTTTACATTAGGATCAGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
||
| 3UTR TCA 72 bp | ATTCAAAGGGTGAAGATGCATTGTCCATCAAGCTTTTaGGCTCTGCCTCAGCTGCTTTGCCGTTATAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: IQRVKMHCPSSF*ALPQLLCRYKG Trigger: GCCTTTATAACGGCAAAGCAGCTGAGGCAGAGCTCAAAAGCTTGATGGACAATGCATCTTCACCCTTTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
||
| 3UTR CCA 72 bp | GCCCACTTCTTCATGATCCTGATGATATACTCCACTTaGGTGTTTCCTGTGCTTCTCAGTAAATGCAGCACT | + |
|
Preference number: 3 (lower is better) Translates to: AHFFMILMIYST*VFPVLLSKCST Trigger: AGTGCTGCATTTACTGAGAAGCACAGGAAACACCCAAGTGGAGTATATCATCAGGATCATGAAGAAGTGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
||
| 3UTR TCA 72 bp | AATAGCTTCTTGGTAATGGGATCGCATGTAGTGGATTaGGGCCAAACTAAGCTGGTCTTCCTTGATATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: NSFLVMGSHVVD*GQTKLVFLDIL Trigger: CAGGATATCAAGGAAGACCAGCTTAGTTTGGCCTCAATCCACTACATGCGATCCCATTACCAAGAAGCTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000160215.2 |
||
| 3UTR TCA 72 bp | AGTGTGTCACTGAAGATGTCAACAGCTCCCAGGAGTTaGTCTGCATCCCACTCTTTTGCTTCCAAGTATTTA | + |
|
Preference number: 3 (lower is better) Translates to: SVSLKMSTAPRS*SASHSFASKYL Trigger: TAAATACTTGGAAGCAAAAGAGTGGGATGCAGATCAACTCCTGGGAGCTGTTGACATCTTCAGTGACACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGGAACACCAGAACAAGACAAGAAGCTCTGGCATAAGGAAATGGTGCAGTTTTAACAGCCAGGACTTCTaGAGACACATCATAGTAATC | + |
|
Preference number: 3 (lower is better) Translates to: REHQNKTRSSGIRKWCSFNSQDF*RHIIVI Trigger: GATTACTATGATGTGTCTCAAGAAGTCCTGGCTGTT...AAAACTGCACCATTTCCTTATGCCAGAGCTTCTTGTCTTGTTCTGGTGTTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
||
| 3UTR TCA 72 bp | AGGGCTGCATTGACAACTCCCTTGAGGATATACTCCTaGGGTGTAGTGGGTTCCAAATCCTTGATTAAATTA | + |
|
Preference number: 3 (lower is better) Translates to: RAALTTPLRIYS*GVVGSKSLIKL Trigger: TAATTTAATCAAGGATTTGGAACCCACTACACCTCAGGAGTATATCCTCAAGGGAGTTGTCAATGCAGCCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
||
| 3UTR GCA 72 bp | GAGAGGCTAGCCATTAGGAGGTCTCTTCAAAGGACCTaGTTTATACTTGTATCAATAAATCCCTACGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: ERLAIRRSLQRT*FILVSINPYDV Trigger: CACATCGTAGGGATTTATTGATACAAGTATAAAGCAGGTCCTTTGAAGAGACCTCCTAATGGCTAGCCTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
||
| 3UTR GCA 72 bp | AGCTCTGGCATAAGGAAATGGTGCAGTTTTGTTTCCTaGAGTTCTGTTAGACCAGTACTGTGTTTTGTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SSGIRKWCSFVS*SSVRPVLCFVL Trigger: AAGCACAAAACACAGTACTGGTCTAACAGAACTGCAGGAAACAAAACTGCACCATTTCCTTATGCCAGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
||
| 3UTR GCA 72 bp | CAGAACAAGACAAGAAGCTCTGGCATAAGGAAATGGTaGAGTTTTGTTTCCTGCAGTTCTGTTAGACCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: QNKTRSSGIRKW*SFVSCSSVRPV Trigger: TACTGGTCTAACAGAACTGCAGGAAACAAAACTGCACCATTTCCTTATGCCAGAGCTTCTTGTCTTGTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTACCTCAGACCTACAGAAGAAAATTACAGAGCATACAAACAAGCAGGTAATCTTCCTGCACATCATCTaGACGAAGGTAGTAAATCAC | + |
|
Preference number: 3 (lower is better) Translates to: CTSDLQKKITEHTNKQVIFLHII*TKVVNH Trigger: GTGATTTACTACCTTCGTCAAGATGATGTGCAGGAA...GATTACCTGCTTGTTTGTATGCTCTGTAATTTTCTTCTGTAGGTCTGAGGTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
||
| CDS-3UTR TCA 90 bp | GCTTTTGAGCTCTGCCTCAGCTGCTTTGCCGTTATAAAGGCGAAAGTGATTGCATCTGGTCTGCCTCTGTaGGTCTGGTCTGCCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AFELCLSCFAVIKAKVIASGLPL*VWSAPV Trigger: CACAGGGGCAGACCAGACTCACAGAGGCAGACCAGA...TGCAATCACTTTCGCCTTTATAACGGCAAAGCAGCTGAGGCAGAGCTCAAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTGTCAGCAGGCCAGGGAGATTCCTGTTGCCTGATGCCTAAGTCCACACATGTGCTTCTCAGTAAATaGAGCACTTCTCGGAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: WVSAGQGDSCCLMPKSTHVLLSK*STSRRV Trigger: GACCCTCCGAGAAGTGCTGCATTTACTGAGAAGCAC...ATGTGTGGACTTAGGCATCAGGCAACAGGAATCTCCCTGGCCTGCTGACACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTAGAGATGAAGGCTGTGTTCAGCCTCTGGTCCTGTTGCTTCAGCTGTTTTGGGCCACATACACATTaGGGGCCAGGTATTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WLEMKAVFSLWSCCFSCFGPHTH*GPGIPC Trigger: ACAGGGAATACCTGGCCCTCAATGTGTATGTGGCCC...AAAACAGCTGAAGCAACAGGACCAGAGGCTGAACACAGCCTTCATCTCTAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
||
| CDS-3UTR GCA 90 bp | GTACTTGTTACTGCAGGTAGGAGAAAATGTCCTGCCGGGCATGGTGGCACACGCACTGGTATTGCCTGTTaGAGCTTTGGCTTGGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: VLVTAGRRKCPAGHGGTRTGIAC*SFGLGI Trigger: TATGCCCAAGCCAAAGCTGCAACAGGCAATACCAGT...GCGTGTGCCACCATGCCCGGCAGGACATTTTCTCCTACCTGCAGTAACAAGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGGCAGGCGGATCTCCGAGTTCAAGGCCAGCCTAGTCTACAGAGTGAGTTCTCATCATTAAACTTGTaGGCCAGATGGAACAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: QRQADLRVQGQPSLQSEFSSLNL*ARWNSR Trigger: CCTACTGTTCCATCTGGCTCACAAGTTTAATGATGA...GAACTCACTCTGTAGACTAGGCTGGCCTTGAACTCGGAGATCCGCCTGCCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
||
| CDS-3UTR TCA 90 bp | TGTGTTCAGCCTCTGGTCCTGTTGCTTCAGCTGTTTTACTCTGTACAGGTTTCCACCCTGATACTGCTCTaGTGTCCTACAGCACAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: CVQPLVLLLQLFYSVQVSTLILL*CPTAQP Trigger: CGGCTGTGCTGTAGGACATCAGAGCAGTATCAGGGT...GGAAACCTGTACAGAGTAAAACAGCTGAAGCAACAGGACCAGAGGCTGAACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
||
| CDS-3UTR TCA 90 bp | CATTGGGTGTCAGCAGGCCAGGGAGATTCCTGTTGCCTGATGCCTAAGTCCACAATCACATTCACTAGCTaGTCCTCCTACCAACTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HWVSAGQGDSCCLMPKSTITFTS*SSYQLE Trigger: TTCCAGTTGGTAGGAGGATCAGCTAGTGAATGTGAT...TGTGGACTTAGGCATCAGGCAACAGGAATCTCCCTGGCCTGCTGACACCCAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTGTGTTCAGCCTCTGGTCCTGTTGCTTCAGCTGTTTTACTCTGTACAGGTATGCACAGTCTGGTCTaGCTCTGTGAGTCTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLCSASGPVASAVLLCTGMHSLV*LCESGL Trigger: CAGACCAGACTCACAGAGGCAGACCAGACTGTGCAT...ACCTGTACAGAGTAAAACAGCTGAAGCAACAGGACCAGAGGCTGAACACAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTGTCAGCAGGCCAGGGAGATTCCTGTTGCCTGATGCCTAAGTCCACACATAAACCCAGCAGCTTCTaGTTGTTTATACATCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: WVSAGQGDSCCLMPKSTHKPSSF*LFIHPK Trigger: CTTGGGATGTATAAACAAGCAGAAGCTGCTGGGTTT...ATGTGTGGACTTAGGCATCAGGCAACAGGAATCTCCCTGGCCTGCTGACACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTGTGTTCAGCCTCTGGTCCTGTTGCTTCAGCTGTTTTACTCTGTACAGGTCCTCTTCACCCTCACTaGTATTGCCTGTTGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLCSASGPVASAVLLCTGPLHPH*YCLLQL Trigger: AAGCTGCAACAGGCAATACCAGTGAGGGTGAAGAGG...ACCTGTACAGAGTAAAACAGCTGAAGCAACAGGACCAGAGGCTGAACACAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
||
| CDS-3UTR CCA 90 bp | CATTGGGTGTCAGCAGGCCAGGGAGATTCCTGTTGCCTGATGCCTAAGTCCACAATGATATACTCCACTTaGGTGTTTCCTGTGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HWVSAGQGDSCCLMPKSTMIYST*VFPVLL Trigger: GAGAAGCACAGGAAACACCCAAGTGGAGTATATCAT...TGTGGACTTAGGCATCAGGCAACAGGAATCTCCCTGGCCTGCTGACACCCAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
||
| 3UTR CAA 72 bp | GCTAGAGATGAAGGCTGTGTTCAGCCTCTGGTCCTGTaGCTTCAGCTGTTTTACTCTGTACAGGTTTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ARDEGCVQPLVL*LQLFYSVQVSL Trigger: GAGGGAAACCTGTACAGAGTAAAACAGCTGAAGCAACAGGACCAGAGGCTGAACACAGCCTTCATCTCTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
||
| CDS-3UTR TCA 90 bp | CATTGGGTGTCAGCAGGCCAGGGAGATTCCTGTTGCCTGATGCCTAAGTCCACAAGCAAATTCAAAGGGTaGAGATGCATTGTCCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: HWVSAGQGDSCCLMPKSTSKFKG*RCIVHQ Trigger: TTGATGGACAATGCATCTTCACCCTTTGAATTTGCT...TGTGGACTTAGGCATCAGGCAACAGGAATCTCCCTGGCCTGCTGACACCCAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
||
| CDS-3UTR GCA 90 bp | TATAAACAGGTACGTATGCTGAGCAGTGGTGCACACATCTTTGATACGAGCACTTCTGTGAGTCTGGTCTaGCCCTGTGCTGTGCACACT | + |
|
Preference number: 4 (lower is better) Translates to: YKQVRMLSSGAHIFDTSTSVSLV*PCAVHT Trigger: AGTGTGCACAGCACAGGGGCAGACCAGACTCACAGA...AGTGCTCGTATCAAAGATGTGTGCACCACTGCTCAGCATACGTACCTGTTTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
||
| 3UTR CAA 72 bp | AGGGCCACATACACATTGAGGGCCAGGTATTCCCTGTaGTCCAGCAGGATCCGCTTGTATATATCAATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RATYTLRARYSL*SSRIRLYISIA Trigger: AGCTATTGATATATACAAGCGGATCCTGCTGGACAACAGGGAATACCTGGCCCTCAATGTGTATGTGGCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000160215.2 |
||
| CDS-3UTR TCA 90 bp | GAGGGCGATGGTACTGTCAGGAATCTGCTGAAGGTAAACAGCCAGGACTTCTTGTCATCATTAAACTTGTaGGCCAGATGGAACAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGDGTVRNLLKVNSQDFLSSLNL*ARWNSR Trigger: CCTACTGTTCCATCTGGCTCACAAGTTTAATGATGA...CAAGAAGTCCTGGCTGTTTACCTTCAGCAGATTCCTGACAGTACCATCGCCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000160215.2 |
||
| CDS-3UTR GCA 90 bp | TGGCTAGAGATGAAGGCTGTGTTCAGCCTCTGGTCCTGTTGCTTCAGCTGTTTTCCCACACTTCTGGATTaGAATTTTCCTCCTTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WLEMKAVFSLWSCCFSCFPTLLD*NFPPSL Trigger: CAACGAAGGAGGAAAATTGCAATCCAGAAGTGTGGG...AAAACAGCTGAAGCAACAGGACCAGAGGCTGAACACAGCCTTCATCTCTAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
||
| CDS-3UTR GCA 90 bp | TCTGATCCACCTAGTACCTTTGGCAAAGAGAACCAGGTGCTACTGAAAAAGAGGCACCCTCACTGGTATTaGCTGTTGCAGCTTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SDPPSTFGKENQVLLKKRHPHWY*LLQLWL Trigger: AAGCCAAAGCTGCAACAGGCAATACCAGTGAGGGTG...CCTCTTTTTCAGTAGCACCTGGTTCTCTTTGCCAAAGGTACTAGGTGGATCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
||
| CDS-3UTR GCA 90 bp | GCTTTGTTTCCTAAAATACAAGGGAGACCTAACTCTGAGACTTACACACCTTCACACAGGCACCCCTCTTaGCTTCCCAGTACTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ALFPKIQGRPNSETYTPSHRHPS*LPSTQG Trigger: ACCCTGAGTACTGGGAAGGCAAGAGGGGTGCCTGTG...TGAAGGTGTGTAAGTCTCAGAGTTAGGTCTCCCTTGTATTTTAGGAAACAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
||
| CDS-3UTR TCA 90 bp | GCCCTGGCTTTGTTTCCTAAAATACAAGGGAGACCTAACTCTGAGACTTACACAGTCCGACTTCTACCCTaGTACTGCTCTGATGTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: ALALFPKIQGRPNSETYTVRLLP*YCSDVL Trigger: TAGGACATCAGAGCAGTATCAGGGTAGAAGTCGGAC...TGTGTAAGTCTCAGAGTTAGGTCTCCCTTGTATTTTAGGAAACAAAGCCAGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
||
| CDS-3UTR TCA 90 bp | TGTGTTCAGCCTCTGGTCCTGTTGCTTCAGCTGTTTTACTCTGTACAGGTTTCCCAGAGGTTTCCATCTTaGGATAAAGCTCCCAAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: CVQPLVLLLQLFYSVQVSQRFPS*DKAPKL Trigger: TAGCTTGGGAGCTTTATCTCAAGATGGAAACCTCTG...GGAAACCTGTACAGAGTAAAACAGCTGAAGCAACAGGACCAGAGGCTGAACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
||
| CDS-3UTR GCA 90 bp | GCTTTGTTTCCTAAAATACAAGGGAGACCTAACTCTGAGACTTACACACCTTCATCTGGTCTGCCCCTGTaGTGTGCACACTCTCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: ALFPKIQGRPNSETYTPSSGLPL*CAHSQP Trigger: TGGTTGAGAGTGTGCACAGCACAGGGGCAGACCAGA...TGAAGGTGTGTAAGTCTCAGAGTTAGGTCTCCCTTGTATTTTAGGAAACAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
||
| CDS-3UTR CCA 90 bp | TCTGATCCACCTAGTACCTTTGGCAAAGAGAACCAGGTGCTACTGAAAAAGAGGCCCAGTACTCAGGGTTaGGATCCAGTCTTTCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SDPPSTFGKENQVLLKKRPSTQG*DPVFLR Trigger: TCTTAGAAAGACTGGATCCCAACCCTGAGTACTGGG...CCTCTTTTTCAGTAGCACCTGGTTCTCTTTGCCAAAGGTACTAGGTGGATCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGTTTAGTCATATCTGATCCACCTAGTACCTTTGGCAAAGAGAACCAGGTGTTTCATATGATCCCTTaGACCCATTTCCTGGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: AGLVISDPPSTFGKENQVFHMIP*THFLAK Trigger: CTTGGCCAGGAAATGGGTTCAAGGGATCATATGAAA...CACCTGGTTCTCTTTGCCAAAGGTACTAGGTGGATCAGATATGACTAAACCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
||
| CDS-3UTR GCA 90 bp | GCCCTGGCTTTGTTTCCTAAAATACAAGGGAGACCTAACTCTGAGACTTACACACTGCCTCAGCTGCTTTaGCGTTATAAAGGCGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ALALFPKIQGRPNSETYTLPQLL*RYKGES Trigger: ACTTTCGCCTTTATAACGGCAAAGCAGCTGAGGCAG...TGTGTAAGTCTCAGAGTTAGGTCTCCCTTGTATTTTAGGAAACAAAGCCAGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
||
| CDS-3UTR GCA 90 bp | ATAGTAATCCAGTTTGTAGTAGCAGAGGGCCACATACACATTGAGGGCCAGGTAAAACCCAGCAGCTTCTaGTTGTTTATACATCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: IVIQFVVAEGHIHIEGQVKPSSF*LFIHPK Trigger: CTTGGGATGTATAAACAAGCAGAAGCTGCTGGGTTT...TACCTGGCCCTCAATGTGTATGTGGCCCTCTGCTACTACAAACTGGATTACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGTCCTATGTTCAAAATTGCTGTTCATTCAGAAGATAGTAAGAACCCTGCCCAGGAAGCCATGCACTaGCTTCCTGGTATTGTATCA | + |
|
Preference number: 4 (lower is better) Translates to: PSPMFKIAVHSEDSKNPAQEAMH*LPGIVS Trigger: TGATACAATACCAGGAAGGCAGTGCATGGCTTCCTG...GGCAGGGTTCTTACTATCTTCTGAATGAACAGCAATTTTGAACATAGGACTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
||
| CDS-3UTR GCA 90 bp | CAGAATAGTGTTCAGAATGATTATGGAAGAAAGGCACCAGTAGATTACATTGGGAGATCATCTGGAAGATaGCCACACAGGCACCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QNSVQNDYGRKAPVDYIGRSSGR*PHRHPS Trigger: AGAGGGGTGCCTGTGTGGGCATCTTCCAGATGATCT...CCCAATGTAATCTACTGGTGCCTTTCTTCCATAATCATTCTGAACACTATTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
||
| CDS-3UTR TCA 90 bp | GCCCTGGCTTTGTTTCCTAAAATACAAGGGAGACCTAACTCTGAGACTTACACAATCAAAAGCTTTGGCTaGATAGTAGAACTGGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ALALFPKIQGRPNSETYTIKSFG*IVELAH Trigger: ATGGGCCAGTTCTACTATTCAGCCAAAGCTTTTGAT...TGTGTAAGTCTCAGAGTTAGGTCTCCCTTGTATTTTAGGAAACAAAGCCAGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
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| CDS-3UTR CCA 90 bp | TGTACCTCAGACCTACAGAAGAAAATTACAGAGCATACAAACAAGCAGGTAATCTTGGAGCCGGCTTTTTaGAGCTTTAAACCCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CTSDLQKKITEHTNKQVILEPAF*SFKPSS Trigger: GCTGCTGGGTTTAAAGCTCCAAAAAGCCGGCTCCAA...GATTACCTGCTTGTTTGTATGCTCTGTAATTTTCTTCTGTAGGTCTGAGGTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
||
| CDS-3UTR CCA 90 bp | CAGAATAGTGTTCAGAATGATTATGGAAGAAAGGCACCAGTAGATTACATTGGGCCAGCTAAGATCATCTaGAAGATGCCCACACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QNSVQNDYGRKAPVDYIGPAKII*KMPTQA Trigger: TGCCTGTGTGGGCATCTTCCAGATGATCTTAGCTGG...CCCAATGTAATCTACTGGTGCCTTTCTTCCATAATCATTCTGAACACTATTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
||
| 3UTR CAA 72 bp | GTCAGGAATCTGCTGAAGGTAAACAGCCAGGACTTCTaGAGACACATCATAGTAATCCAGTTTGTAGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VRNLLKVNSQDF*RHIIVIQFVVA Trigger: TGCTACTACAAACTGGATTACTATGATGTGTCTCAAGAAGTCCTGGCTGTTTACCTTCAGCAGATTCCTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000160215.2 |
||
| 3UTR CAA 72 bp | ATGAGTTCTTTAGCAAATTCAAAGGGTGAAGATGCATaGTCCATCAAGCTTTTGAGCTCTGCCTCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MSSLANSKGEDA*SIKLLSSASAA Trigger: AGCAGCTGAGGCAGAGCTCAAAAGCTTGATGGACAATGCATCTTCACCCTTTGAATTTGCTAAAGAACTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
||
| 3UTR CAA 72 bp | GTTCATTCAGAAGATAGTAAGAACCCTGCCCTGGCTTaGTTTCCTAAAATACAAGGGAGACCTAACTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VHSEDSKNPALA*FPKIQGRPNSE Trigger: CTCAGAGTTAGGTCTCCCTTGTATTTTAGGAAACAAAGCCAGGGCAGGGTTCTTACTATCTTCTGAATGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
||
| CDS-3UTR GCA 90 bp | GCTTTGTTTCCTAAAATACAAGGGAGACCTAACTCTGAGACTTACACACCTTCACCCACACTTCTGGATTaGAATTTTCCTCCTTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ALFPKIQGRPNSETYTPSPTLLD*NFPPSL Trigger: CAACGAAGGAGGAAAATTGCAATCCAGAAGTGTGGG...TGAAGGTGTGTAAGTCTCAGAGTTAGGTCTCCCTTGTATTTTAGGAAACAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
||
| CDS-3UTR GCA 90 bp | CCTACAGAAGAAAATTACAGAGCATACAAACAAGCAGGTAATCTGATACACAAATTCCTGGCCAAGGGCTaGATTGACAACTCCCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PTEENYRAYKQAGNLIHKFLAKG*IDNSLE Trigger: CTCAAGGGAGTTGTCAATGCAGCCCTTGGCCAGGAA...TTTGTGTATCAGATTACCTGCTTGTTTGTATGCTCTGTAATTTTCTTCTGTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
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| CDS-3UTR CCA 90 bp | CAGTACTGTGTTTTGTGCTTTGGCCCAATCATATCTGATCCTAATGTAAAAGATCTTGAACCCATTTCCTaGCCAAGGGCTGCATTGACA | + |
|
Preference number: 4 (lower is better) Translates to: QYCVLCFGPIISDPNVKDLEPIS*PRAALT Trigger: TGTCAATGCAGCCCTTGGCCAGGAAATGGGTTCAAG...ATCTTTTACATTAGGATCAGATATGATTGGGCCAAAGCACAAAACACAGTACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
||
| CDS-3UTR CCA 90 bp | ATATCTGATCCTAATGTAAAAGATGGCACACTGGCCATCTTCTCGGGAAGACTTCATGCACTGCCTTCCTaGTATTGTATCACATTCACT | + |
|
Preference number: 4 (lower is better) Translates to: ISDPNVKDGTLAIFSGRLHALPS*YCITFT Trigger: AGTGAATGTGATACAATACCAGGAAGGCAGTGCATG...AAGTCTTCCCGAGAAGATGGCCAGTGTGCCATCTTTTACATTAGGATCAGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
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| CDS-3UTR TCA 90 bp | GCTTTGTTTCCTAAAATACAAGGGAGACCTAACTCTGAGACTTACACACCTTCATCATCATTAAACTTGTaGGCCAGATGGAACAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALFPKIQGRPNSETYTPSSSLNL*ARWNSR Trigger: CCTACTGTTCCATCTGGCTCACAAGTTTAATGATGA...TGAAGGTGTGTAAGTCTCAGAGTTAGGTCTCCCTTGTATTTTAGGAAACAAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
||
| CDS-3UTR TCA 90 bp | CCTACAGAAGAAAATTACAGAGCATACAAACAAGCAGGTAATCTGATACACAAATGTCCATCAAGCTTTTaGGCTCTGCCTCAGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PTEENYRAYKQAGNLIHKCPSSF*ALPQLL Trigger: AAGCAGCTGAGGCAGAGCTCAAAAGCTTGATGGACA...TTTGTGTATCAGATTACCTGCTTGTTTGTATGCTCTGTAATTTTCTTCTGTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
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| CDS-3UTR GCA 90 bp | TATAAACAGGTACGTATGCTGAGCAGTGGTGCACACATCTTTGATACGAGCACTAAAACAACCAGATTGTaGCTGATGAGTTCTTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YKQVRMLSSGAHIFDTSTKTTRL*LMSSLA Trigger: TGCTAAAGAACTCATCAGGCACAATCTGGTTGTTTT...AGTGCTCGTATCAAAGATGTGTGCACCACTGCTCAGCATACGTACCTGTTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
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| CDS-3UTR CCA 90 bp | CAGAATAGTGTTCAGAATGATTATGGAAGAAAGGCACCAGTAGATTACATTGGGGATCCTCCTACCAACTaGAAAAACTGCTGGGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: QNSVQNDYGRKAPVDYIGDPPTN*KNCWAI Trigger: AATTGCCCAGCAGTTTTTCCAGTTGGTAGGAGGATC...CCCAATGTAATCTACTGGTGCCTTTCTTCCATAATCATTCTGAACACTATTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGTAAATTACAGAATAGTGTTCAGAATGATTATGGAAGAAAGGCACCAGTATTGAGGATATACTCCTaGGGTGTAGTGGGTTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ASKLQNSVQNDYGRKAPVLRIYS*GVVGSK Trigger: TTTGGAACCCACTACACCTCAGGAGTATATCCTCAA...TACTGGTGCCTTTCTTCCATAATCATTCTGAACACTATTCTGTAATTTACTGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
||
| CDS-3UTR GCA 90 bp | CCTACAGAAGAAAATTACAGAGCATACAAACAAGCAGGTAATCTGATACACAAACTTGGGTGTTTCCTGTaGTTCTCAGTAAATGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PTEENYRAYKQAGNLIHKLGCFL*FSVNAA Trigger: TGCTGCATTTACTGAGAAGCACAGGAAACACCCAAG...TTTGTGTATCAGATTACCTGCTTGTTTGTATGCTCTGTAATTTTCTTCTGTAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
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| CDS-3UTR CCA 90 bp | CCTACAGAAGAAAATTACAGAGCATACAAACAAGCAGGTAATCTGATACACAAAGTTCACCCACACTTCTaGATTGCAATTTTCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PTEENYRAYKQAGNLIHKVHPHF*IAIFLL Trigger: AAGGAGGAAAATTGCAATCCAGAAGTGTGGGTGAAC...TTTGTGTATCAGATTACCTGCTTGTTTGTATGCTCTGTAATTTTCTTCTGTAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
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| CDS-3UTR CCA 90 bp | CAGTACTGTGTTTTGTGCTTTGGCCCAATCATATCTGATCCTAATGTAAAAGATTTCAGTTTCTCACTTTaGATCAAGAGGAAAACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QYCVLCFGPIISDPNVKDFSFSL*IKRKTS Trigger: AGAGGTTTTCCTCTTGATCCAAAGTGAGAAACTGAA...ATCTTTTACATTAGGATCAGATATGATTGGGCCAAAGCACAAAACACAGTACTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
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| CDS TCA 90 bp | GTCCTACAGCACAGCCGTCCACATGCACAGTCTGGTCTGCCTCTGTaGGTCTGGTCTGCCCCTGTGCTGTGCACACTCTCAACCAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: VLQHSRPHAQSGLPL*VWSAPVLCTLSTKH Trigger: GTGTTTGGTTGAGAGTGTGCACAGCACAGGGGCAGACCAGACTCACAGAGGCAGACCAGACTGTGCATGTGGACGGCTGTGCTGTAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| CDS TCA 90 bp | TTCCAAGTCCTGCTCTCCAGTCCGACTTCTACCCTGATACTGCTCTaGTGTCCTACAGCACAGCCGTCCACATGCACAGTCTGGTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: FQVLLSSPTSTLILL*CPTAQPSTCTVWSA Trigger: GGCAGACCAGACTGTGCATGTGGACGGCTGTGCTGTAGGACATCAGAGCAGTATCAGGGTAGAAGTCGGACTGGAGAGCAGGACTTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| CDS TCA 90 bp | GCGGTTTTGGAGCCGGCTTTTTGGAGCTGCAGGGCTACAGAAGAGTaGGAAGGCAGCTGTTCCAAGTCCTGCTCTCCAGTCCGACTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: AVLEPAFWSCRATEE*EGSCSKSCSPVRLL Trigger: TAGAAGTCGGACTGGAGAGCAGGACTTGGAACAGCTGCCTTCTCACTCTTCTGTAGCCCTGCAGCTCCAAAAAGCCGGCTCCAAAACCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
||
| CDS-3UTR CAA 90 bp | GTACTTGTTACTGCAGGTAGGAGAAAATGTCCTGCCGGGCATGGTGGCACACGCGGCACTCTATTCTCCTaGGCCCACTTCTTCATGATC | + |
|
Preference number: 5 (lower is better) Translates to: VLVTAGRRKCPAGHGGTRGTLFS*AHFFMI Trigger: GATCATGAAGAAGTGGGCCAAGGAGAATAGAGTGCC...GCGTGTGCCACCATGCCCGGCAGGACATTTTCTCCTACCTGCAGTAACAAGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
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| CDS-3UTR CAA 90 bp | ATAGTAATCCAGTTTGTAGTAGCAGAGGGCCACATACACATTGAGGGCCAGGTATTTGGAGCCGGCTTTTaGGAGCTGCAGGGCTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: IVIQFVVAEGHIHIEGQVFGAGF*ELQGYR Trigger: TCTGTAGCCCTGCAGCTCCAAAAAGCCGGCTCCAAA...TACCTGGCCCTCAATGTGTATGTGGCCCTCTGCTACTACAAACTGGATTACTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
||
| CDS-3UTR CAA 90 bp | CATTGGGTGTCAGCAGGCCAGGGAGATTCCTGTTGCCTGATGCCTAAGTCCACAAACAGCCAGGACTTCTaGAGACACATCATAGTAATC | + |
|
Preference number: 5 (lower is better) Translates to: HWVSAGQGDSCCLMPKSTNSQDF*RHIIVI Trigger: GATTACTATGATGTGTCTCAAGAAGTCCTGGCTGTT...TGTGGACTTAGGCATCAGGCAACAGGAATCTCCCTGGCCTGCTGACACCCAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
||
| CDS-3UTR CAA 90 bp | GTACTTGTTACTGCAGGTAGGAGAAAATGTCCTGCCGGGCATGGTGGCACACGCTTCCTGCACATCATCTaGACGAAGGTAGTAAATCAC | + |
|
Preference number: 5 (lower is better) Translates to: VLVTAGRRKCPAGHGGTRFLHII*TKVVNH Trigger: GTGATTTACTACCTTCGTCAAGATGATGTGCAGGAA...GCGTGTGCCACCATGCCCGGCAGGACATTTTCTCCTACCTGCAGTAACAAGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGTTTAGTCATATCTGATCCACCTAGTACCTTTGGCAAAGAGAACCAGGTGTTGCAGGCCTTAAGGTaGAGGGCGATGGTACTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AGLVISDPPSTFGKENQVLQALR*RAMVLS Trigger: TGACAGTACCATCGCCCTCAACCTTAAGGCCTGCAA...CACCTGGTTCTCTTTGCCAAAGGTACTAGGTGGATCAGATATGACTAAACCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
||
| CDS-3UTR CAA 90 bp | TCTGATCCACCTAGTACCTTTGGCAAAGAGAACCAGGTGCTACTGAAAAAGAGGCACTGGTATTGCCTGTaGCAGCTTTGGCTTGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SDPPSTFGKENQVLLKKRHWYCL*QLWLGH Trigger: ATGCCCAAGCCAAAGCTGCAACAGGCAATACCAGTG...CCTCTTTTTCAGTAGCACCTGGTTCTCTTTGCCAAAGGTACTAGGTGGATCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
||
| CDS-3UTR CAA 90 bp | GCTTTGTTTCCTAAAATACAAGGGAGACCTAACTCTGAGACTTACACACCTTCAACACAGGCACCCCTCTaGCCTTCCCAGTACTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ALFPKIQGRPNSETYTPSTQAPL*PSQYSG Trigger: CCCTGAGTACTGGGAAGGCAAGAGGGGTGCCTGTGT...TGAAGGTGTGTAAGTCTCAGAGTTAGGTCTCCCTTGTATTTTAGGAAACAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTTCAGCCTCTGGTCCTGTTGCTTCAGCTGTTTTACTCTGTACAGGTTTCCCCTTTCTTCTTTCTTTaGTCAGTGTGCGGTGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: CVQPLVLLLQLFYSVQVSPFFFL*SVCGDS Trigger: GGAGTCACCGCACACTGACAAAAGAAAGAAGAAAGG...GGAAACCTGTACAGAGTAAAACAGCTGAAGCAACAGGACCAGAGGCTGAACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
||
| CDS-3UTR CAA 90 bp | CATCAAGCTTTTGAGCTCTGCCTCAGCTGCTTTGCCGTTATAAAGGCGAAAGTGCCTTTCTTCTTTCTTTaGTCAGTGTGCGGTGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: HQAFELCLSCFAVIKAKVPFFFL*SVCGDS Trigger: GGAGTCACCGCACACTGACAAAAGAAAGAAGAAAGG...CACTTTCGCCTTTATAACGGCAAAGCAGCTGAGGCAGAGCTCAAAAGCTTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000160215.2 |
||
| CDS-3UTR CAA 90 bp | AGGGAACACCAGAACAAGACAAGAAGCTCTGGCATAAGGAAATGGTGCAGTTTTTTGTCCATCAAGCTTTaGAGCTCTGCCTCAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: REHQNKTRSSGIRKWCSFLSIKL*SSASAA Trigger: AGCAGCTGAGGCAGAGCTCAAAAGCTTGATGGACAA...AAAACTGCACCATTTCCTTATGCCAGAGCTTCTTGTCTTGTTCTGGTGTTCCCT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
||
| CDS-3UTR CAA 90 bp | AGAGCAAGGAAAGAAATGTCAATCAAGCAGGGTCCTGGATTGCATATTCAAGTGTGGCCAAGGGCTGCATaGACAACTCCCTTGAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: RARKEMSIKQGPGLHIQVWPRAA*TTPLRI Trigger: TATCCTCAAGGGAGTTGTCAATGCAGCCCTTGGCCA...CACTTGAATATGCAATCCAGGACCCTGCTTGATTGACATTTCTTTCCTTGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
||
| CDS-3UTR CAA 90 bp | ATATCTGATCCTAATGTAAAAGATGGCACACTGGCCATCTTCTCGGGAAGACTTTCACCCTCACTGGTATaGCCTGTTGCAGCTTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ISDPNVKDGTLAIFSGRLSPSLV*PVAALA Trigger: AGCCAAAGCTGCAACAGGCAATACCAGTGAGGGTGA...AAGTCTTCCCGAGAAGATGGCCAGTGTGCCATCTTTTACATTAGGATCAGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
||
| CDS-3UTR CAA 90 bp | CAGCAGGATCCGCTTGTATATATCAATAGCTTCTTGGTAATGGGATCGCATGTATTTGGAGCCGGCTTTTaGGAGCTCCAAAGCTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QQDPLVYINSFLVMGSHVFGAGF*ELQSSL Trigger: AAGAGAGCTTTGGAGCTCCAAAAAGCCGGCTCCAAA...TACATGCGATCCCATTACCAAGAAGCTATTGATATATACAAGCGGATCCTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160215.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTTGTCCAGCAGGATCCGCTTGTATATATCAATAGCTTCTTGGTAATGGGAACCCACACTTCTGGATaGCAATTTTCCTCCTTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: PVVQQDPLVYINSFLVMGTHTSG*QFSSFV Trigger: AACGAAGGAGGAAAATTGCAATCCAGAAGTGTGGGT...TCCCATTACCAAGAAGCTATTGATATATACAAGCGGATCCTGCTGGACAACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
||
| CDS-3UTR CAA 90 bp | TGTACCTCAGACCTACAGAAGAAAATTACAGAGCATACAAACAAGCAGGTAATCCCTTTCTTCTTTCTTTaGTCAGTGTGCGGTGACTCC | + |
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Preference number: 5 (lower is better) Translates to: CTSDLQKKITEHTNKQVIPFFFL*SVCGDS Trigger: GGAGTCACCGCACACTGACAAAAGAAAGAAGAAAGG...GATTACCTGCTTGTTTGTATGCTCTGTAATTTTCTTCTGTAGGTCTGAGGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159145.8 ENSMUST00000162554.8 |
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| CDS-3UTR CAA 90 bp | CCCAGTCCTATGTTCAAAATTGCTGTTCATTCAGAAGATAGTAAGAACCCTGCCCGGAAAACAACCAGATaGTGCCTGATGAGTTCTTTA | + |
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Preference number: 5 (lower is better) Translates to: PSPMFKIAVHSEDSKNPARKTTR*CLMSSL Trigger: TAAAGAACTCATCAGGCACAATCTGGTTGTTTTCCG...GGCAGGGTTCTTACTATCTTCTGAATGAACAGCAATTTTGAACATAGGACTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
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| CDS-3UTR CAA 90 bp | GCAGGTTTAGTCATATCTGATCCACCTAGTACCTTTGGCAAAGAGAACCAGGTGTGTTGCAGCTTTGGCTaGGGCATAATTAAAGTTAAA | + |
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Preference number: 5 (lower is better) Translates to: AGLVISDPPSTFGKENQVCCSFG*GIIKVK Trigger: TTTAACTTTAATTATGCCCAAGCCAAAGCTGCAACA...CACCTGGTTCTCTTTGCCAAAGGTACTAGGTGGATCAGATATGACTAAACCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
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| CDS TCA 90 bp | GTATATATCAATAGCTTCTTGGTAATGGGATCGCATGTAGTGGATTaGGGCCAAACTAAGCTGGTCTTCCTTGATATCCTGAAGATTCTT | + |
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Preference number: 5 (lower is better) Translates to: VYINSFLVMGSHVVD*GQTKLVFLDILKIL Trigger: AAGAATCTTCAGGATATCAAGGAAGACCAGCTTAGTTTGGCCTCAATCCACTACATGCGATCCCATTACCAAGAAGCTATTGATATATAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161751.8 |
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| CDS-3UTR CAA 90 bp | CAGTACTGTGTTTTGTGCTTTGGCCCAATCATATCTGATCCTAATGTAAAAGATAAGGGTGAAGATGCATaGTCCATCAAGCTTTTGAGC | + |
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Preference number: 5 (lower is better) Translates to: QYCVLCFGPIISDPNVKDKGEDA*SIKLLS Trigger: GCTCAAAAGCTTGATGGACAATGCATCTTCACCCTT...ATCTTTTACATTAGGATCAGATATGATTGGGCCAAAGCACAAAACACAGTACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
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| CDS-3UTR CAA 90 bp | TTTCCTTTCACTCACCTTTTTAAAACCATATACTCAGCTTGTCTCAACGTAACAGATGATATACTCCACTaGGGTGTTTCCTGTGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: FPFTHLFKTIYSACLNVTDDILH*GVSCAS Trigger: AGAAGCACAGGAAACACCCAAGTGGAGTATATCATC...TGTTACGTTGAGACAAGCTGAGTATATGGTTTTAAAAAGGTGAGTGAAAGGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
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| CDS TCA 72 bp | CACAGCCGTCCACATGCACAGTCTGGTCTGCCTCTGTaGGTCTGGTCTGCCCCTGTGCTGTGCACACTCTCA | + |
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Preference number: 6 (lower is better) Translates to: HSRPHAQSGLPL*VWSAPVLCTLS Trigger: TGAGAGTGTGCACAGCACAGGGGCAGACCAGACTCACAGAGGCAGACCAGACTGTGCATGTGGACGGCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| CDS GCA 72 bp | TCCTACAGCACAGCCGTCCACATGCACAGTCTGGTCTaGCTCTGTGAGTCTGGTCTGCCCCTGTGCTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: SYSTAVHMHSLV*LCESGLPLCCA Trigger: TGCACAGCACAGGGGCAGACCAGACTCACAGAGGCAGACCAGACTGTGCATGTGGACGGCTGTGCTGTAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| CDS TCA 72 bp | GAGCCGGCTTTTTGGAGCTGCAGGGCTACAGAAGAGTaGGAAGGCAGCTGTTCCAAGTCCTGCTCTCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: EPAFWSCRATEE*EGSCSKSCSPV Trigger: GACTGGAGAGCAGGACTTGGAACAGCTGCCTTCTCACTCTTCTGTAGCCCTGCAGCTCCAAAAAGCCGGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| CDS TCA 72 bp | CTGCTCTCCAGTCCGACTTCTACCCTGATACTGCTCTaGTGTCCTACAGCACAGCCGTCCACATGCACAGTC | + |
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Preference number: 6 (lower is better) Translates to: LLSSPTSTLILL*CPTAQPSTCTV Trigger: GACTGTGCATGTGGACGGCTGTGCTGTAGGACATCAGAGCAGTATCAGGGTAGAAGTCGGACTGGAGAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| CDS GCA 72 bp | ACATGCACAGTCTGGTCTGCCTCTGTGAGTCTGGTCTaGCCCTGTGCTGTGCACACTCTCAACCAAACACTG | + |
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Preference number: 6 (lower is better) Translates to: TCTVWSASVSLV*PCAVHTLNQTL Trigger: CAGTGTTTGGTTGAGAGTGTGCACAGCACAGGGGCAGACCAGACTCACAGAGGCAGACCAGACTGTGCATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| CDS CAA 72 bp | CCAGATGGAACAGTAGGCGGTTTTGGAGCCGGCTTTTaGGAGCTGCAGGGCTACAGAAGAGTGAGAAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: PDGTVGGFGAGF*ELQGYRRVRRQ Trigger: CTGCCTTCTCACTCTTCTGTAGCCCTGCAGCTCCAAAAAGCCGGCTCCAAAACCGCCTACTGTTCCATCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| CDS CAA 90 bp | ACTTGTGAGCCAGATGGAACAGTAGGCGGTTTTGGAGCCGGCTTTTaGGAGCTGCAGGGCTACAGAAGAGTGAGAAGGCAGCTGTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: TCEPDGTVGGFGAGF*ELQGYRRVRRQLFQ Trigger: TTGGAACAGCTGCCTTCTCACTCTTCTGTAGCCCTGCAGCTCCAAAAAGCCGGCTCCAAAACCGCCTACTGTTCCATCTGGCTCACAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159145.8 |
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| CDS CAA 90 bp | CCAATCCATAAGTTAGTGTCGTCTTCTTGCTCCCCAACGTGGCGCTaGAACTCCAATAGGGTAATGGCGCCAGTGAAATCTCTCTGCGAA | + |
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Preference number: 6 (lower is better) Translates to: PIHKLVSSSCSPTWR*NSNRVMAPVKSLCE Trigger: TTCGCAGAGAGATTTCACTGGCGCCATTACCCTATTGGAGTTCAAGCGCCACGTTGGGGAGCAAGAAGACGACACTAACTTATGGATTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000159145.8 ENSMUST00000160215.2 ENSMUST00000161751.8 ENSMUST00000162554.8 |
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| CDS CAA 72 bp | AAGTTAGTGTCGTCTTCTTGCTCCCCAACGTGGCGCTaGAACTCCAATAGGGTAATGGCGCCAGTGAAATCT | + |
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Preference number: 6 (lower is better) Translates to: KLVSSSCSPTWR*NSNRVMAPVKS Trigger: AGATTTCACTGGCGCCATTACCCTATTGGAGTTCAAGCGCCACGTTGGGGAGCAAGAAGACGACACTAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000159145.8 ENSMUST00000160215.2 ENSMUST00000161751.8 ENSMUST00000162554.8 |
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| CDS GCA 72 bp | GCACAGTATCCAATCCATAAGTTAGTGTCGTCTTCTTaGTCCCCAACGTGGCGCTTGAACTCCAATAGGGTA | + |
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Preference number: 6 (lower is better) Translates to: AQYPIHKLVSSS*SPTWRLNSNRV Trigger: TACCCTATTGGAGTTCAAGCGCCACGTTGGGGAGCAAGAAGACGACACTAACTTATGGATTGGATACTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000159145.8 ENSMUST00000160215.2 ENSMUST00000161751.8 ENSMUST00000162554.8 |
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| CDS TCA 72 bp | GCACTGCCTTCCTGGTATTGTATCACATTCACTAGCTaGTCCTCCTACCAACTGGAAAAACTGCTGGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: ALPSWYCITFTS*SSYQLEKLLGN Trigger: ATTGCCCAGCAGTTTTTCCAGTTGGTAGGAGGATCAGCTAGTGAATGTGATACAATACCAGGAAGGCAGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162554.8 |
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| CDS GCA 72 bp | AGTAGGTGCAGGCCAAGTTCACCCACACTTCTGGATTaGAATTTTCCTCCTTCGTTGCATTTTCATATTCCT | + |
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Preference number: 6 (lower is better) Translates to: SRCRPSSPTLLD*NFPPSLHFHIP Trigger: AGGAATATGAAAATGCAACGAAGGAGGAAAATTGCAATCCAGAAGTGTGGGTGAACTTGGCCTGCACCTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000159145.8 ENSMUST00000161751.8 ENSMUST00000162554.8 |
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