Pregenerated sensors for TTC23L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022249Ensembl transcript IDs: ENSMUST00000022857.14, ENSMUST00000167842.9
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | AATTCTCGGCTAACACTTGGATTTGTTAATGCTGCATaGGACTGGAAATTGTCGGCTCACTGGTTGTTTACA | + |
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Preference number: 3 (lower is better) Translates to: NSRLTLGFVNAA*DWKLSAHWLFT Trigger: TGTAAACAACCAGTGAGCCGACAATTTCCAGTCTCATGCAGCATTAACAAATCCAAGTGTTAGCCGAGAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| 3UTR CCA 72 bp | AGACATGCACATAATTTGTGTACAGATCTCAAAGGATaGATTCTGAACCATTTTTCAGAGTCATGGGACACA | + |
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Preference number: 3 (lower is better) Translates to: RHAHNLCTDLKG*ILNHFSESWDT Trigger: TGTGTCCCATGACTCTGAAAAATGGTTCAGAATCCATCCTTTGAGATCTGTACACAAATTATGTGCATGTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| 3UTR TCA 72 bp | CACATAATTTGTGTACAGATCTCAAAGGATGGATTCTaGACCATTTTTCAGAGTCATGGGACACATACATTT | + |
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Preference number: 3 (lower is better) Translates to: HIICVQISKDGF*TIFQSHGTHTF Trigger: AAATGTATGTGTCCCATGACTCTGAAAAATGGTTCAGAATCCATCCTTTGAGATCTGTACACAAATTATGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR GCA 90 bp | AGTTTCCAGTCCCTGATAACACTCTCAAGATCTTTCGTCCTGGGCATCGCCCTCCCCCGCTTCCTGATGTaGAGTGTCTTCCTCAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: SFQSLITLSRSFVLGIALPRFLM*SVFLSL Trigger: GAGACTGAGGAAGACACTGCACATCAGGAAGCGGGG...GAGGGCGATGCCCAGGACGAAAGATCTTGAGAGTGTTATCAGGGACTGGAAACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167842.9 |
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| CDS-3UTR CCA 90 bp | GTAGAGTTTCCAGTCCCTGATAACACTCTCAAGATCTTTCGTCCTGGGCATCGCTCTCCGCATGTTTCTTaGCCTGAGCTGGGAGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: VEFPVPDNTLKIFRPGHRSPHVS*PELGGL Trigger: GAGGCCTCCCAGCTCAGGCCAAGAAACATGCGGAGA...GCGATGCCCAGGACGAAAGATCTTGAGAGTGTTATCAGGGACTGGAAACTCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167842.9 |
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| CDS-3UTR CCA 90 bp | AGTTTCCAGTCCCTGATAACACTCTCAAGATCTTTCGTCCTGGGCATCGCCCTCGCCTGCTGCAAGTACTaGATGGCCTGTTTGTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: SFQSLITLSRSFVLGIALACCKY*MACLWF Trigger: GAACCACAAACAGGCCATCCAGTACTTGCAGCAGGC...GAGGGCGATGCCCAGGACGAAAGATCTTGAGAGTGTTATCAGGGACTGGAAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167842.9 |
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| CDS-3UTR CCA 90 bp | GTAGAGTTTCCAGTCCCTGATAACACTCTCAAGATCTTTCGTCCTGGGCATCGCCTCGCCTCAGCAGTTTaGGGGCTGACTTCAGAAAAC | + |
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Preference number: 4 (lower is better) Translates to: VEFPVPDNTLKIFRPGHRLASAV*GLTSEN Trigger: GTTTTCTGAAGTCAGCCCCCAAACTGCTGAGGCGAG...GCGATGCCCAGGACGAAAGATCTTGAGAGTGTTATCAGGGACTGGAAACTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167842.9 |
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| CDS-3UTR TCA 90 bp | GAGTTTCCAGTCCCTGATAACACTCTCAAGATCTTTCGTCCTGGGCATCGCCCTCAATCTGAGAGAGGATaGAACACCGAATCAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: EFPVPDNTLKIFRPGHRPQSERG*NTESAP Trigger: AGGAGCTGATTCGGTGTTTCATCCTCTCTCAGATTG...AGGGCGATGCCCAGGACGAAAGATCTTGAGAGTGTTATCAGGGACTGGAAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167842.9 |
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| CDS-3UTR TCA 90 bp | AGTTTCCAGTCCCTGATAACACTCTCAAGATCTTTCGTCCTGGGCATCGCCCTCCAGCAGTTTGGGGGCTaGCTTCAGAAAACGAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: SFQSLITLSRSFVLGIALQQFGG*LQKTKK Trigger: TTTCTTCGTTTTCTGAAGTCAGCCCCCAAACTGCTG...GAGGGCGATGCCCAGGACGAAAGATCTTGAGAGTGTTATCAGGGACTGGAAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167842.9 |
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| CDS-3UTR TCA 90 bp | GTAGAGTTTCCAGTCCCTGATAACACTCTCAAGATCTTTCGTCCTGGGCATCGCAGCTCTGACGTGTTGTaGCCCTTGTCAAGGATAACA | + |
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Preference number: 4 (lower is better) Translates to: VEFPVPDNTLKIFRPGHRSSDVL*PLSRIT Trigger: TGTTATCCTTGACAAGGGTCACAACACGTCAGAGCT...GCGATGCCCAGGACGAAAGATCTTGAGAGTGTTATCAGGGACTGGAAACTCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167842.9 |
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| CDS-3UTR GCA 90 bp | AGTTTCCAGTCCCTGATAACACTCTCAAGATCTTTCGTCCTGGGCATCGCCCTCGATAAACTTGCCCTCTaGAATAGGGAAAGGAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: SFQSLITLSRSFVLGIALDKLAL*NRERRL Trigger: AAGCCTCCTTTCCCTATTGCAGAGGGCAAGTTTATC...GAGGGCGATGCCCAGGACGAAAGATCTTGAGAGTGTTATCAGGGACTGGAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167842.9 |
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| CDS-3UTR TCA 90 bp | AGTTTCCAGTCCCTGATAACACTCTCAAGATCTTTCGTCCTGGGCATCGCCCTCTTCCCAAAAACAATCTaGGAGAGGATGAAACACCGA | + |
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Preference number: 4 (lower is better) Translates to: SFQSLITLSRSFVLGIALFPKTI*ERMKHR Trigger: TCGGTGTTTCATCCTCTCTCAGATTGTTTTTGGGAA...GAGGGCGATGCCCAGGACGAAAGATCTTGAGAGTGTTATCAGGGACTGGAAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167842.9 |
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| CDS-3UTR GCA 90 bp | GTAGAGTTTCCAGTCCCTGATAACACTCTCAAGATCTTTCGTCCTGGGCATCGCGTCATCTGTTTCTTGTaGTGGGATTCCAGTTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: VEFPVPDNTLKIFRPGHRVICFL*WDSSLL Trigger: CAGCAAACTGGAATCCCAGCACAAGAAACAGATGAC...GCGATGCCCAGGACGAAAGATCTTGAGAGTGTTATCAGGGACTGGAAACTCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167842.9 |
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| CDS-3UTR GCA 90 bp | AGTTTCCAGTCCCTGATAACACTCTCAAGATCTTTCGTCCTGGGCATCGCCCTCCTTCATATTTCTCTCTaGTTTCTGCAGGTGGATGTA | + |
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Preference number: 4 (lower is better) Translates to: SFQSLITLSRSFVLGIALLHISL*FLQVDV Trigger: TACATCCACCTGCAGAAAGCAGAGAGAAATATGAAG...GAGGGCGATGCCCAGGACGAAAGATCTTGAGAGTGTTATCAGGGACTGGAAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167842.9 |
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| CDS-3UTR TCA 90 bp | GTAGAGTTTCCAGTCCCTGATAACACTCTCAAGATCTTTCGTCCTGGGCATCGCCTTCTTATCCTTGTCTaGAGTTGTATTTCGCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: VEFPVPDNTLKIFRPGHRLLILV*SCISLP Trigger: TGGAAGCGAAATACAACTTCAGACAAGGATAAGAAG...GCGATGCCCAGGACGAAAGATCTTGAGAGTGTTATCAGGGACTGGAAACTCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167842.9 |
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| CDS-3UTR TCA 90 bp | GTAGAGTTTCCAGTCCCTGATAACACTCTCAAGATCTTTCGTCCTGGGCATCGCTTTCACCATTTTCGATaGGCCACGTACAAAAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: VEFPVPDNTLKIFRPGHRFHHFR*ATYKSL Trigger: AAGACTTTTGTACGTGGCTCATCGAAAATGGTGAAA...GCGATGCCCAGGACGAAAGATCTTGAGAGTGTTATCAGGGACTGGAAACTCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167842.9 |
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| CDS-3UTR CCA 90 bp | GAGTTTCCAGTCCCTGATAACACTCTCAAGATCTTTCGTCCTGGGCATCGCCCTTCTGAGCCCAGAGTTTaGTATGTACTAATACTTCTT | + |
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Preference number: 4 (lower is better) Translates to: EFPVPDNTLKIFRPGHRPSEPRV*YVLILL Trigger: AAGAAGTATTAGTACATACCAAACTCTGGGCTCAGA...AGGGCGATGCCCAGGACGAAAGATCTTGAGAGTGTTATCAGGGACTGGAAACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167842.9 |
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| CDS-3UTR TCA 90 bp | TGGACTTATAGTTACAGTCTTCATTATCACAAATTCTCGGCTAACACTTGGATTGCATGTTTCTTGGCCTaGGCTGGGAGGCCTCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: WTYSYSLHYHKFSANTWIACFLA*AGRPLS Trigger: ACTGAGAGGCCTCCCAGCTCAGGCCAAGAAACATGC...AATCCAAGTGTTAGCCGAGAATTTGTGATAATGAAGACTGTAACTATAAGTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR GCA 90 bp | GTTAAGGAAGGTAAAGACAGACATGCACATAATTTGTGTACAGATCTCAAAGGACCCCGCTTCCTGATGTaGAGTGTCTTCCTCAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: VKEGKDRHAHNLCTDLKGPRFLM*SVFLSL Trigger: GAGACTGAGGAAGACACTGCACATCAGGAAGCGGGG...TCCTTTGAGATCTGTACACAAATTATGTGCATGTCTGTCTTTACCTTCCTTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR CCA 90 bp | GTTAAGGAAGGTAAAGACAGACATGCACATAATTTGTGTACAGATCTCAAAGGATTTCTTGGCCTGAGCTaGGAGGCCTCTCAGTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: VKEGKDRHAHNLCTDLKGFLGLS*EASQCQ Trigger: CTGACACTGAGAGGCCTCCCAGCTCAGGCCAAGAAA...TCCTTTGAGATCTGTACACAAATTATGTGCATGTCTGTCTTTACCTTCCTTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR CCA 90 bp | TGTTGTCTATCTTATGTAGAGTTTCCAGTCCCTGATAACACTCTCAAGATCTTTTTTCTTGGCCTGAGCTaGGAGGCCTCTCAGTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: CCLSYVEFPVPDNTLKIFFLGLS*EASQCQ Trigger: CTGACACTGAGAGGCCTCCCAGCTCAGGCCAAGAAA...AAAGATCTTGAGAGTGTTATCAGGGACTGGAAACTCTACATAAGATAGACAACA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000167842.9 |
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| CDS-3UTR CCA 90 bp | CAAATTGTTAAGGAAGGTAAAGACAGACATGCACATAATTTGTGTACAGATCTCTCTCCGCATGTTTCTTaGCCTGAGCTGGGAGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: QIVKEGKDRHAHNLCTDLSPHVS*PELGGL Trigger: GAGGCCTCCCAGCTCAGGCCAAGAAACATGCGGAGA...GAGATCTGTACACAAATTATGTGCATGTCTGTCTTTACCTTCCTTAACAATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR GCA 90 bp | TGTTGTCTATCTTATGTAGAGTTTCCAGTCCCTGATAACACTCTCAAGATCTTTGCTAGGTTCATCCTGTaGATAGCCAAGGAGGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: CCLSYVEFPVPDNTLKIFARFIL*IAKEAL Trigger: GAGAGCCTCCTTGGCTATGCACAGGATGAACCTAGC...AAAGATCTTGAGAGTGTTATCAGGGACTGGAAACTCTACATAAGATAGACAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167842.9 |
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| CDS-3UTR GCA 90 bp | TGTTGTCTATCTTATGTAGAGTTTCCAGTCCCTGATAACACTCTCAAGATCTTTGGATGTAGGCCTGTTTaGCATGGTTTTGTAGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: CCLSYVEFPVPDNTLKIFGCRPV*HGFVGA Trigger: GGCTCCTACAAAACCATGGCAAACAGGCCTACATCC...AAAGATCTTGAGAGTGTTATCAGGGACTGGAAACTCTACATAAGATAGACAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167842.9 |
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| CDS-3UTR GCA 90 bp | CAAATTGTTAAGGAAGGTAAAGACAGACATGCACATAATTTGTGTACAGATCTCGCTAGGTTCATCCTGTaGATAGCCAAGGAGGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: QIVKEGKDRHAHNLCTDLARFIL*IAKEAL Trigger: GAGAGCCTCCTTGGCTATGCACAGGATGAACCTAGC...GAGATCTGTACACAAATTATGTGCATGTCTGTCTTTACCTTCCTTAACAATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR CCA 90 bp | TGGACTTATAGTTACAGTCTTCATTATCACAAATTCTCGGCTAACACTTGGATTTGGATGGCCTGTTTGTaGTTCTTCCTCAGCTGCTCG | + |
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Preference number: 4 (lower is better) Translates to: WTYSYSLHYHKFSANTWIWMACL*FFLSCS Trigger: CGAGCAGCTGAGGAAGAACCACAAACAGGCCATCCA...AATCCAAGTGTTAGCCGAGAATTTGTGATAATGAAGACTGTAACTATAAGTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR CCA 90 bp | CATAATTTGTGTACAGATCTCAAAGGATGGATTCTGAACCATTTTTCAGAGTCAGCCTGCTGCAAGTACTaGATGGCCTGTTTGTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: HNLCTDLKGWILNHFSESACCKY*MACLWF Trigger: GAACCACAAACAGGCCATCCAGTACTTGCAGCAGGC...TGACTCTGAAAAATGGTTCAGAATCCATCCTTTGAGATCTGTACACAAATTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR CCA 90 bp | AATGGACTTATAGTTACAGTCTTCATTATCACAAATTCTCGGCTAACACTTGGACTCGCCTCAGCAGTTTaGGGGCTGACTTCAGAAAAC | + |
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Preference number: 4 (lower is better) Translates to: NGLIVTVFIITNSRLTLGLASAV*GLTSEN Trigger: GTTTTCTGAAGTCAGCCCCCAAACTGCTGAGGCGAG...TCCAAGTGTTAGCCGAGAATTTGTGATAATGAAGACTGTAACTATAAGTCCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR TCA 90 bp | GTTAAGGAAGGTAAAGACAGACATGCACATAATTTGTGTACAGATCTCAAAGGACAATCTGAGAGAGGATaGAACACCGAATCAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: VKEGKDRHAHNLCTDLKGQSERG*NTESAP Trigger: AGGAGCTGATTCGGTGTTTCATCCTCTCTCAGATTG...TCCTTTGAGATCTGTACACAAATTATGTGCATGTCTGTCTTTACCTTCCTTAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR GCA 90 bp | GTTACAGTCTTCATTATCACAAATTCTCGGCTAACACTTGGATTTGTTAATGCTGGATGTAGGCCTGTTTaGCATGGTTTTGTAGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: VTVFIITNSRLTLGFVNAGCRPV*HGFVGA Trigger: GGCTCCTACAAAACCATGGCAAACAGGCCTACATCC...AGCATTAACAAATCCAAGTGTTAGCCGAGAATTTGTGATAATGAAGACTGTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR TCA 90 bp | AATGGACTTATAGTTACAGTCTTCATTATCACAAATTCTCGGCTAACACTTGGAAGCTCTGACGTGTTGTaGCCCTTGTCAAGGATAACA | + |
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Preference number: 4 (lower is better) Translates to: NGLIVTVFIITNSRLTLGSSDVL*PLSRIT Trigger: TGTTATCCTTGACAAGGGTCACAACACGTCAGAGCT...TCCAAGTGTTAGCCGAGAATTTGTGATAATGAAGACTGTAACTATAAGTCCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR TCA 90 bp | GTTACAGTCTTCATTATCACAAATTCTCGGCTAACACTTGGATTTGTTAATGCTCAGCAGTTTGGGGGCTaGCTTCAGAAAACGAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: VTVFIITNSRLTLGFVNAQQFGG*LQKTKK Trigger: TTTCTTCGTTTTCTGAAGTCAGCCCCCAAACTGCTG...AGCATTAACAAATCCAAGTGTTAGCCGAGAATTTGTGATAATGAAGACTGTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR GCA 90 bp | GTTAAGGAAGGTAAAGACAGACATGCACATAATTTGTGTACAGATCTCAAAGGAGTCATCTGTTTCTTGTaGTGGGATTCCAGTTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: VKEGKDRHAHNLCTDLKGVICFL*WDSSLL Trigger: CAGCAAACTGGAATCCCAGCACAAGAAACAGATGAC...TCCTTTGAGATCTGTACACAAATTATGTGCATGTCTGTCTTTACCTTCCTTAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR TCA 90 bp | TGTTGTCTATCTTATGTAGAGTTTCCAGTCCCTGATAACACTCTCAAGATCTTTGAGTATAGTAGAGTCTaGCCAGAGTTTCCAGGATTT | + |
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Preference number: 4 (lower is better) Translates to: CCLSYVEFPVPDNTLKIFEYSRV*PEFPGF Trigger: AAATCCTGGAAACTCTGGTCAGACTCTACTATACTC...AAAGATCTTGAGAGTGTTATCAGGGACTGGAAACTCTACATAAGATAGACAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167842.9 |
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| CDS-3UTR TCA 90 bp | TGTTGTCTATCTTATGTAGAGTTTCCAGTCCCTGATAACACTCTCAAGATCTTTAGTTTCATAGTCTTCTaGGCCCAGAGTTTGGTATGT | + |
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Preference number: 4 (lower is better) Translates to: CCLSYVEFPVPDNTLKIFSFIVF*AQSLVC Trigger: ACATACCAAACTCTGGGCTCAGAAGACTATGAAACT...AAAGATCTTGAGAGTGTTATCAGGGACTGGAAACTCTACATAAGATAGACAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167842.9 |
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| CDS-3UTR GCA 90 bp | TGTTGTCTATCTTATGTAGAGTTTCCAGTCCCTGATAACACTCTCAAGATCTTTCCTTGGCAAAACAGATaGTGCCCATGTTATAAAAGG | + |
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Preference number: 4 (lower is better) Translates to: CCLSYVEFPVPDNTLKIFPWQNR*CPCYKR Trigger: CCTTTTATAACATGGGCAGCATCTGTTTTGCCAAGG...AAAGATCTTGAGAGTGTTATCAGGGACTGGAAACTCTACATAAGATAGACAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167842.9 |
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| CDS-3UTR GCA 90 bp | CATAATTTGTGTACAGATCTCAAAGGATGGATTCTGAACCATTTTTCAGAGTCATTGAGTCTCCATCTCTaGAATAGGGAAAGGAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: HNLCTDLKGWILNHFSESLSLHL*NRERRL Trigger: AAGCCTCCTTTCCCTATTGCAGAGATGGAGACTCAA...TGACTCTGAAAAATGGTTCAGAATCCATCCTTTGAGATCTGTACACAAATTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| 3UTR CAA 72 bp | ATTCTCTGTGACTCTCCAAAGCTACAACTCATGGTTTaGAATGACCATGTTGTAACATACAGCACTCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: ILCDSPKLQLMV*NDHVVTYSTLS Trigger: AGAAAGAGTGCTGTATGTTACAACATGGTCATTCAAAACCATGAGTTGTAGCTTTGGAGAGTCACAGAGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR TCA 90 bp | GTTACAGTCTTCATTATCACAAATTCTCGGCTAACACTTGGATTTGTTAATGCTTTCCCAAAAACAATCTaGGAGAGGATGAAACACCGA | + |
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Preference number: 4 (lower is better) Translates to: VTVFIITNSRLTLGFVNAFPKTI*ERMKHR Trigger: TCGGTGTTTCATCCTCTCTCAGATTGTTTTTGGGAA...AGCATTAACAAATCCAAGTGTTAGCCGAGAATTTGTGATAATGAAGACTGTAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR TCA 90 bp | TGGACTTATAGTTACAGTCTTCATTATCACAAATTCTCGGCTAACACTTGGATTGAGTATAGTAGAGTCTaGCCAGAGTTTCCAGGATTT | + |
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Preference number: 4 (lower is better) Translates to: WTYSYSLHYHKFSANTWIEYSRV*PEFPGF Trigger: AAATCCTGGAAACTCTGGTCAGACTCTACTATACTC...AATCCAAGTGTTAGCCGAGAATTTGTGATAATGAAGACTGTAACTATAAGTCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR TCA 90 bp | AATGGACTTATAGTTACAGTCTTCATTATCACAAATTCTCGGCTAACACTTGGAAGTTTCATAGTCTTCTaGGCCCAGAGTTTGGTATGT | + |
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Preference number: 4 (lower is better) Translates to: NGLIVTVFIITNSRLTLGSFIVF*AQSLVC Trigger: ACATACCAAACTCTGGGCTCAGAAGACTATGAAACT...TCCAAGTGTTAGCCGAGAATTTGTGATAATGAAGACTGTAACTATAAGTCCATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR GCA 90 bp | AATGGACTTATAGTTACAGTCTTCATTATCACAAATTCTCGGCTAACACTTGGACCTTGGCAAAACAGATaGTGCCCATGTTATAAAAGG | + |
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Preference number: 4 (lower is better) Translates to: NGLIVTVFIITNSRLTLGPWQNR*CPCYKR Trigger: CCTTTTATAACATGGGCAGCATCTGTTTTGCCAAGG...TCCAAGTGTTAGCCGAGAATTTGTGATAATGAAGACTGTAACTATAAGTCCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR TCA 90 bp | AATGGACTTATAGTTACAGTCTTCATTATCACAAATTCTCGGCTAACACTTGGACTTCTTATCCTTGTCTaGAGTTGTATTTCGCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: NGLIVTVFIITNSRLTLGLLILV*SCISLP Trigger: TGGAAGCGAAATACAACTTCAGACAAGGATAAGAAG...TCCAAGTGTTAGCCGAGAATTTGTGATAATGAAGACTGTAACTATAAGTCCATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR TCA 90 bp | GTTACAGTCTTCATTATCACAAATTCTCGGCTAACACTTGGATTTGTTAATGCTTTTCACCATTTTCGATaGGCCACGTACAAAAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: VTVFIITNSRLTLGFVNAFHHFR*ATYKSL Trigger: AAGACTTTTGTACGTGGCTCATCGAAAATGGTGAAA...AGCATTAACAAATCCAAGTGTTAGCCGAGAATTTGTGATAATGAAGACTGTAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR TCA 90 bp | GTTACAGTCTTCATTATCACAAATTCTCGGCTAACACTTGGATTTGTTAATGCTTTTCTAAGGTCTCTTTaGGTCTCCATCTCTGCAATA | + |
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Preference number: 4 (lower is better) Translates to: VTVFIITNSRLTLGFVNAFLRSL*VSISAI Trigger: TATTGCAGAGATGGAGACTCAAAGAGACCTTAGAAA...AGCATTAACAAATCCAAGTGTTAGCCGAGAATTTGTGATAATGAAGACTGTAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR GCA 90 bp | AATGGACTTATAGTTACAGTCTTCATTATCACAAATTCTCGGCTAACACTTGGAAATCAGCTCCTTGTTTaGTTTGGTGCTCATTTTGCT | + |
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Preference number: 4 (lower is better) Translates to: NGLIVTVFIITNSRLTLGNQLLV*FGAHFA Trigger: AGCAAAATGAGCACCAAAGCAAACAAGGAGCTGATT...TCCAAGTGTTAGCCGAGAATTTGTGATAATGAAGACTGTAACTATAAGTCCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR GCA 90 bp | TTAAGGAAGGTAAAGACAGACATGCACATAATTTGTGTACAGATCTCAAAGGATCTTCATATTTCTCTCTaGTTTCTGCAGGTGGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: LRKVKTDMHIICVQISKDLHISL*FLQVDV Trigger: TACATCCACCTGCAGAAAGCAGAGAGAAATATGAAG...ATCCTTTGAGATCTGTACACAAATTATGTGCATGTCTGTCTTTACCTTCCTTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR CCA 90 bp | CATAATTTGTGTACAGATCTCAAAGGATGGATTCTGAACCATTTTTCAGAGTCAGTAATTACTGTTTTCTaGAAAGTTTCTCCTCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HNLCTDLKGWILNHFSESVITVF*KVSPPL Trigger: CAGCGGAGGAGAAACTTTCCAGAAAACAGTAATTAC...TGACTCTGAAAAATGGTTCAGAATCCATCCTTTGAGATCTGTACACAAATTATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR CCA 90 bp | CAAATTGTTAAGGAAGGTAAAGACAGACATGCACATAATTTGTGTACAGATCTCTCTGAGCCCAGAGTTTaGTATGTACTAATACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QIVKEGKDRHAHNLCTDLSEPRV*YVLILL Trigger: AAGAAGTATTAGTACATACCAAACTCTGGGCTCAGA...GAGATCTGTACACAAATTATGTGCATGTCTGTCTTTACCTTCCTTAACAATTTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| 3UTR CAA 72 bp | ATTGTTAAGGAAGGTAAAGACAGACATGCACATAATTaGTGTACAGATCTCAAAGGATGGATTCTGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: IVKEGKDRHAHN*CTDLKGWILNH Trigger: ATGGTTCAGAATCCATCCTTTGAGATCTGTACACAAATTATGTGCATGTCTGTCTTTACCTTCCTTAACAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS CCA 90 bp | GCTTCCAGGTCAGCAGTGTGTTCCTGGCTTTCTCCGCATGTTTCTTaGCCTGAGCTGGGAGGCCTCTCAGTGTCAGGTAACCATACGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ASRSAVCSWLSPHVS*PELGGLSVSGNHTP Trigger: TGGCGTATGGTTACCTGACACTGAGAGGCCTCCCAGCTCAGGCCAAGAAACATGCGGAGAAAGCCAGGAACACACTGCTGACCTGGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022857.14 ENSMUST00000167842.9 |
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| CDS CCA 90 bp | CCTTGTCTGAAGTTGTATTTCGCTTCCAGGTCAGCAGTGTGTTCCTaGCTTTCTCCGCATGTTTCTTGGCCTGAGCTGGGAGGCCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PCLKLYFASRSAVCS*LSPHVSWPELGGLS Trigger: TGAGAGGCCTCCCAGCTCAGGCCAAGAAACATGCGGAGAAAGCCAGGAACACACTGCTGACCTGGAAGCGAAATACAACTTCAGACAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022857.14 ENSMUST00000167842.9 |
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| CDS-3UTR CAA 90 bp | GAGTTTCCAGTCCCTGATAACACTCTCAAGATCTTTCGTCCTGGGCATCGCCCTTCTCCGAGTTCTCCCTaGGCAAAACAGATGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: EFPVPDNTLKIFRPGHRPSPSSP*AKQMLP Trigger: GGGCAGCATCTGTTTTGCCAAGGGAGAACTCGGAGA...AGGGCGATGCCCAGGACGAAAGATCTTGAGAGTGTTATCAGGGACTGGAAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167842.9 |
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| CDS GCA 90 bp | TCGCAGATTGCCTTCTCAAAGTACGCCAGGGCTAGGTTCATCCTGTaGATAGCCAAGGAGGCTCTCCCCAAAGCAATGGTTAGGTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SQIAFSKYARARFIL*IAKEALPKAMVRSF Trigger: GAAAGACCTAACCATTGCTTTGGGGAGAGCCTCCTTGGCTATGCACAGGATGAACCTAGCCCTGGCGTACTTTGAGAAGGCAATCTGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022857.14 ENSMUST00000167842.9 |
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| CDS-3UTR CAA 90 bp | AGTTTCCAGTCCCTGATAACACTCTCAAGATCTTTCGTCCTGGGCATCGCCCTCACTCGCCTCAGCAGTTaGGGGGCTGACTTCAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SFQSLITLSRSFVLGIALTRLSS*GADFRK Trigger: TTTTCTGAAGTCAGCCCCCAAACTGCTGAGGCGAGT...GAGGGCGATGCCCAGGACGAAAGATCTTGAGAGTGTTATCAGGGACTGGAAACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167842.9 |
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| CDS-3UTR CAA 90 bp | GAGTTTCCAGTCCCTGATAACACTCTCAAGATCTTTCGTCCTGGGCATCGCCCTTGCTCAGTAGCTCAATaGCTTCTCCGAGTTCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: EFPVPDNTLKIFRPGHRPCSVAQ*LLRVLP Trigger: AGGGAGAACTCGGAGAAGCAATTGAGCTACTGAGCA...AGGGCGATGCCCAGGACGAAAGATCTTGAGAGTGTTATCAGGGACTGGAAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167842.9 |
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| CDS CCA 90 bp | CCTGAGCTGGGAGGCCTCTCAGTGTCAGGTAACCATACGCCAGGTTaGCTAAAGCCTGTGCACATTTCCAATGTTCTTTCCCAAAAACAA | + |
|
Preference number: 5 (lower is better) Translates to: PELGGLSVSGNHTPG*LKPVHISNVLSQKQ Trigger: TTGTTTTTGGGAAAGAACATTGGAAATGTGCACAGGCTTTAGCCAACCTGGCGTATGGTTACCTGACACTGAGAGGCCTCCCAGCTCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022857.14 ENSMUST00000167842.9 |
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| CDS GCA 90 bp | TTTGGGAATAGACAGACAGTCAACGGTCATCCCCGCTTCCTGATGTaGAGTGTCTTCCTCAGTCTCCTCACAGTAACAAGTAGAGAACAA | + |
|
Preference number: 5 (lower is better) Translates to: FGNRQTVNGHPRFLM*SVFLSLLTVTSREQ Trigger: TTGTTCTCTACTTGTTACTGTGAGGAGACTGAGGAAGACACTGCACATCAGGAAGCGGGGATGACCGTTGACTGTCTGTCTATTCCCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022857.14 ENSMUST00000167842.9 |
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| CDS TCA 90 bp | GTAGAGTCTGACCAGAGTTTCCAGGATTTCCTTCTTATCCTTGTCTaGAGTTGTATTTCGCTTCCAGGTCAGCAGTGTGTTCCTGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VESDQSFQDFLLILV*SCISLPGQQCVPGF Trigger: AAAGCCAGGAACACACTGCTGACCTGGAAGCGAAATACAACTTCAGACAAGGATAAGAAGGAAATCCTGGAAACTCTGGTCAGACTCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022857.14 ENSMUST00000167842.9 |
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| CDS-3UTR CAA 90 bp | AGTTTCCAGTCCCTGATAACACTCTCAAGATCTTTCGTCCTGGGCATCGCCCTCCCACAAATGTTACCGTaGTTTAATTCTTTCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SFQSLITLSRSFVLGIALPQMLP*FNSFSS Trigger: GGAACTGAAAGAATTAAACAACGGTAACATTTGTGG...GAGGGCGATGCCCAGGACGAAAGATCTTGAGAGTGTTATCAGGGACTGGAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167842.9 |
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| CDS CCA 90 bp | AAGGAGGCTCTCCCCAAAGCAATGGTTAGGTCTTTCTCCGAGACTTaGATTCCACAAATGTTACCGTTGTTTAATTCTTTCAGTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KEALPKAMVRSFSET*IPQMLPLFNSFSSF Trigger: GAAGGAACTGAAAGAATTAAACAACGGTAACATTTGTGGAATCCAAGTCTCGGAGAAAGACCTAACCATTGCTTTGGGGAGAGCCTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022857.14 ENSMUST00000167842.9 |
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| CDS-3UTR CAA 90 bp | TGTTGTCTATCTTATGTAGAGTTTCCAGTCCCTGATAACACTCTCAAGATCTTTTACTGGATGGCCTGTTaGTGGTTCTTCCTCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CCLSYVEFPVPDNTLKIFYWMAC*WFFLSC Trigger: GCAGCTGAGGAAGAACCACAAACAGGCCATCCAGTA...AAAGATCTTGAGAGTGTTATCAGGGACTGGAAACTCTACATAAGATAGACAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167842.9 |
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| CDS-3UTR CAA 90 bp | CAAATTGTTAAGGAAGGTAAAGACAGACATGCACATAATTTGTGTACAGATCTCTCTCCGAGTTCTCCCTaGGCAAAACAGATGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QIVKEGKDRHAHNLCTDLSPSSP*AKQMLP Trigger: GGGCAGCATCTGTTTTGCCAAGGGAGAACTCGGAGA...GAGATCTGTACACAAATTATGTGCATGTCTGTCTTTACCTTCCTTAACAATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR CAA 90 bp | AATGGACTTATAGTTACAGTCTTCATTATCACAAATTCTCGGCTAACACTTGGATACTGGATGGCCTGTTaGTGGTTCTTCCTCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NGLIVTVFIITNSRLTLGYWMAC*WFFLSC Trigger: GCAGCTGAGGAAGAACCACAAACAGGCCATCCAGTA...TCCAAGTGTTAGCCGAGAATTTGTGATAATGAAGACTGTAACTATAAGTCCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR CAA 90 bp | CAAATTGTTAAGGAAGGTAAAGACAGACATGCACATAATTTGTGTACAGATCTCACTCGCCTCAGCAGTTaGGGGGCTGACTTCAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: QIVKEGKDRHAHNLCTDLTRLSS*GADFRK Trigger: TTTTCTGAAGTCAGCCCCCAAACTGCTGAGGCGAGT...GAGATCTGTACACAAATTATGTGCATGTCTGTCTTTACCTTCCTTAACAATTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR CAA 90 bp | GTTAAGGAAGGTAAAGACAGACATGCACATAATTTGTGTACAGATCTCAAAGGACACCGAATCAGCTCCTaGTTTGCTTTGGTGCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: VKEGKDRHAHNLCTDLKGHRISS*FALVLI Trigger: AATGAGCACCAAAGCAAACAAGGAGCTGATTCGGTG...TCCTTTGAGATCTGTACACAAATTATGTGCATGTCTGTCTTTACCTTCCTTAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR CAA 90 bp | TGTTGTCTATCTTATGTAGAGTTTCCAGTCCCTGATAACACTCTCAAGATCTTTCACCGAATCAGCTCCTaGTTTGCTTTGGTGCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: CCLSYVEFPVPDNTLKIFHRISS*FALVLI Trigger: AATGAGCACCAAAGCAAACAAGGAGCTGATTCGGTG...AAAGATCTTGAGAGTGTTATCAGGGACTGGAAACTCTACATAAGATAGACAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167842.9 |
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| CDS-3UTR CAA 90 bp | TTAAGGAAGGTAAAGACAGACATGCACATAATTTGTGTACAGATCTCAAAGGATTGCTCAGTAGCTCAATaGCTTCTCCGAGTTCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LRKVKTDMHIICVQISKDCSVAQ*LLRVLP Trigger: AGGGAGAACTCGGAGAAGCAATTGAGCTACTGAGCA...ATCCTTTGAGATCTGTACACAAATTATGTGCATGTCTGTCTTTACCTTCCTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR CAA 90 bp | TGTTGTCTATCTTATGTAGAGTTTCCAGTCCCTGATAACACTCTCAAGATCTTTCAAGTCATCTGTTTCTaGTGCTGGGATTCCAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: CCLSYVEFPVPDNTLKIFQVICF*CWDSSL Trigger: CAAACTGGAATCCCAGCACAAGAAACAGATGACTTG...AAAGATCTTGAGAGTGTTATCAGGGACTGGAAACTCTACATAAGATAGACAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167842.9 |
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| CDS-3UTR CAA 90 bp | TGTTGTCTATCTTATGTAGAGTTTCCAGTCCCTGATAACACTCTCAAGATCTTTTCCATCTGGATAAACTaGCCCTCTGCAATAGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: CCLSYVEFPVPDNTLKIFSIWIN*PSAIGK Trigger: TTTCCCTATTGCAGAGGGCAAGTTTATCCAGATGGA...AAAGATCTTGAGAGTGTTATCAGGGACTGGAAACTCTACATAAGATAGACAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167842.9 |
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| CDS-3UTR CAA 90 bp | TTAAGGAAGGTAAAGACAGACATGCACATAATTTGTGTACAGATCTCAAAGGATCAAGTCATCTGTTTCTaGTGCTGGGATTCCAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LRKVKTDMHIICVQISKDQVICF*CWDSSL Trigger: CAAACTGGAATCCCAGCACAAGAAACAGATGACTTG...ATCCTTTGAGATCTGTACACAAATTATGTGCATGTCTGTCTTTACCTTCCTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR CAA 90 bp | GTTAAGGAAGGTAAAGACAGACATGCACATAATTTGTGTACAGATCTCAAAGGACCACAAATGTTACCGTaGTTTAATTCTTTCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VKEGKDRHAHNLCTDLKGPQMLP*FNSFSS Trigger: GGAACTGAAAGAATTAAACAACGGTAACATTTGTGG...TCCTTTGAGATCTGTACACAAATTATGTGCATGTCTGTCTTTACCTTCCTTAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS-3UTR CAA 90 bp | CAAATTGTTAAGGAAGGTAAAGACAGACATGCACATAATTTGTGTACAGATCTCTTTTCTAAGGTCTCTTaGAGTCTCCATCTCTGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: QIVKEGKDRHAHNLCTDLFSKVS*SLHLCN Trigger: ATTGCAGAGATGGAGACTCAAAGAGACCTTAGAAAA...GAGATCTGTACACAAATTATGTGCATGTCTGTCTTTACCTTCCTTAACAATTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS TCA 90 bp | CCACGTACAAAAGTCTTCAATGGCGGTAAGAGTTTCATAGTCTTCTaGGCCCAGAGTTTGGTATGTACTAATACTTCTTATAAAATATAT | + |
|
Preference number: 5 (lower is better) Translates to: PRTKVFNGGKSFIVF*AQSLVCTNTSYKIY Trigger: ATATATTTTATAAGAAGTATTAGTACATACCAAACTCTGGGCTCAGAAGACTATGAAACTCTTACCGCCATTGAAGACTTTTGTACGTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022857.14 ENSMUST00000167842.9 |
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| CDS-3UTR CAA 90 bp | CAAATTGTTAAGGAAGGTAAAGACAGACATGCACATAATTTGTGTACAGATCTCATTTCCTTCTTATCCTaGTCTGAAGTTGTATTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: QIVKEGKDRHAHNLCTDLISFLS*SEVVFR Trigger: GCGAAATACAACTTCAGACAAGGATAAGAAGGAAAT...GAGATCTGTACACAAATTATGTGCATGTCTGTCTTTACCTTCCTTAACAATTTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022857.14 |
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| CDS CCA 72 bp | GTTCCTGGCTTTCTCCGCATGTTTCTTGGCCTGAGCTaGGAGGCCTCTCAGTGTCAGGTAACCATACGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VPGFLRMFLGLS*EASQCQVTIRQ Trigger: CTGGCGTATGGTTACCTGACACTGAGAGGCCTCCCAGCTCAGGCCAAGAAACATGCGGAGAAAGCCAGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022857.14 ENSMUST00000167842.9 |
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| CDS TCA 72 bp | GTCATCTGTTTCTTGTGCTGGGATTCCAGTTTGCTGTaGCCGGGCCAGGCAGTTCAGACCTCTGCTACCTCG | + |
|
Preference number: 6 (lower is better) Translates to: VICFLCWDSSLL*PGQAVQTSATS Trigger: CGAGGTAGCAGAGGTCTGAACTGCCTGGCCCGGTCACAGCAAACTGGAATCCCAGCACAAGAAACAGATGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022857.14 ENSMUST00000167842.9 |
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| CDS CCA 72 bp | TCAGCAGTGTGTTCCTGGCTTTCTCCGCATGTTTCTTaGCCTGAGCTGGGAGGCCTCTCAGTGTCAGGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: SAVCSWLSPHVS*PELGGLSVSGN Trigger: GTTACCTGACACTGAGAGGCCTCCCAGCTCAGGCCAAGAAACATGCGGAGAAAGCCAGGAACACACTGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022857.14 ENSMUST00000167842.9 |
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| CDS GCA 72 bp | GCCTTCTCAAAGTACGCCAGGGCTAGGTTCATCCTGTaGATAGCCAAGGAGGCTCTCCCCAAAGCAATGGTT | + |
|
Preference number: 6 (lower is better) Translates to: AFSKYARARFIL*IAKEALPKAMV Trigger: AACCATTGCTTTGGGGAGAGCCTCCTTGGCTATGCACAGGATGAACCTAGCCCTGGCGTACTTTGAGAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022857.14 ENSMUST00000167842.9 |
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| CDS GCA 72 bp | AACAAGTCATCTGTTTCTTGTGCTGGGATTCCAGTTTaGTGTGACCGGGCCAGGCAGTTCAGACCTCTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: NKSSVSCAGIPV*CDRARQFRPLL Trigger: TAGCAGAGGTCTGAACTGCCTGGCCCGGTCACAGCAAACTGGAATCCCAGCACAAGAAACAGATGACTTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022857.14 ENSMUST00000167842.9 |
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| CDS CCA 72 bp | GGAGGCCTCTCAGTGTCAGGTAACCATACGCCAGGTTaGCTAAAGCCTGTGCACATTTCCAATGTTCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GGLSVSGNHTPG*LKPVHISNVLS Trigger: GGAAAGAACATTGGAAATGTGCACAGGCTTTAGCCAACCTGGCGTATGGTTACCTGACACTGAGAGGCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022857.14 ENSMUST00000167842.9 |
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| CDS CCA 72 bp | AAGTTGTATTTCGCTTCCAGGTCAGCAGTGTGTTCCTaGCTTTCTCCGCATGTTTCTTGGCCTGAGCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: KLYFASRSAVCS*LSPHVSWPELG Trigger: TCCCAGCTCAGGCCAAGAAACATGCGGAGAAAGCCAGGAACACACTGCTGACCTGGAAGCGAAATACAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022857.14 ENSMUST00000167842.9 |
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| CDS CAA 90 bp | CATAGACAAGACTCTGAATCATCAGACACTTGCTCAGTAGCTCAATaGCTTCTCCGAGTTCTCCCTTGGCAAAACAGATGCTGCCCATGT | + |
|
Preference number: 6 (lower is better) Translates to: HRQDSESSDTCSVAQ*LLRVLPWQNRCCPC Trigger: ACATGGGCAGCATCTGTTTTGCCAAGGGAGAACTCGGAGAAGCAATTGAGCTACTGAGCAAGTGTCTGATGATTCAGAGTCTTGTCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022857.14 ENSMUST00000167842.9 |
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| CDS TCA 72 bp | ATGGCCTGTTTGTGGTTCTTCCTCAGCTGCTCGATCTaGGCGATTTCTTCGTACAAACTAATCAGCTCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: MACLWFFLSCSI*AISSYKLISSD Trigger: GTCAGAGCTGATTAGTTTGTACGAAGAAATCGCTCAGATCGAGCAGCTGAGGAAGAACCACAAACAGGCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022857.14 ENSMUST00000167842.9 |
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| CDS CCA 72 bp | TACGCTTTCGCTAGTAAAGCACTCGCCTCAGCAGTTTaGGGGCTGACTTCAGAAAACGAAGAAACACAGATA | + |
|
Preference number: 6 (lower is better) Translates to: YAFASKALASAV*GLTSENEETQI Trigger: TATCTGTGTTTCTTCGTTTTCTGAAGTCAGCCCCCAAACTGCTGAGGCGAGTGCTTTACTAGCGAAAGCGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022857.14 ENSMUST00000167842.9 |
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| CDS CAA 72 bp | GACTCTGAATCATCAGACACTTGCTCAGTAGCTCAATaGCTTCTCCGAGTTCTCCCTTGGCAAAACAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: DSESSDTCSVAQ*LLRVLPWQNRC Trigger: GCATCTGTTTTGCCAAGGGAGAACTCGGAGAAGCAATTGAGCTACTGAGCAAGTGTCTGATGATTCAGAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022857.14 ENSMUST00000167842.9 |
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| CDS GCA 72 bp | CACTTCCATAGACAAGACTCTGAATCATCAGACACTTaGTCAGTAGCTCAATTGCTTCTCCGAGTTCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: HFHRQDSESSDT*SVAQLLLRVLP Trigger: AGGGAGAACTCGGAGAAGCAATTGAGCTACTGAGCAAGTGTCTGATGATTCAGAGTCTTGTCTATGGAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022857.14 ENSMUST00000167842.9 |
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| CDS CCA 72 bp | TGCTCAGTAGCTCAATTGCTTCTCCGAGTTCTCCCTTaGCAAAACAGATGCTGCCCATGTTATAAAAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: CSVAQLLLRVLP*QNRCCPCYKRF Trigger: AAACCTTTTATAACATGGGCAGCATCTGTTTTGCCAAGGGAGAACTCGGAGAAGCAATTGAGCTACTGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022857.14 ENSMUST00000167842.9 |
||
| CDS GCA 72 bp | CAATTGCTTCTCCGAGTTCTCCCTTGGCAAAACAGATaGTGCCCATGTTATAAAAGGTTTCAGCTACCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: QLLLRVLPWQNR*CPCYKRFQLPF Trigger: AAAAGGTAGCTGAAACCTTTTATAACATGGGCAGCATCTGTTTTGCCAAGGGAGAACTCGGAGAAGCAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022857.14 ENSMUST00000167842.9 |
||
| CDS GCA 72 bp | CTGAGAGAGGATGAAACACCGAATCAGCTCCTTGTTTaGTTTGGTGCTCATTTTGCTGTTAATGAATTGATT | + |
|
Preference number: 6 (lower is better) Translates to: LREDETPNQLLV*FGAHFAVNELI Trigger: AATCAATTCATTAACAGCAAAATGAGCACCAAAGCAAACAAGGAGCTGATTCGGTGTTTCATCCTCTCTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022857.14 ENSMUST00000167842.9 |
||
| CDS TCA 72 bp | AAAGTCTTCAATGGCGGTAAGAGTTTCATAGTCTTCTaGGCCCAGAGTTTGGTATGTACTAATACTTCTTAT | + |
|
Preference number: 6 (lower is better) Translates to: KVFNGGKSFIVF*AQSLVCTNTSY Trigger: ATAAGAAGTATTAGTACATACCAAACTCTGGGCTCAGAAGACTATGAAACTCTTACCGCCATTGAAGACTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022857.14 ENSMUST00000167842.9 |
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