Pregenerated sensors for TTC23 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030555Ensembl transcript IDs: ENSMUST00000032774.16, ENSMUST00000107470.2, ENSMUST00000107471.8, ENSMUST00000208764.2
Found 269 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTCATACGAGGGAGGCTTTGTGCAGGGTCTCGCTGCCCCAGATGTaGCTCTGGATGGAGCAGGAGCCCTGCCTGTCACCAGGTGAGTCT | + |
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Preference number: 1 (lower is better) Translates to: FHTREALCRVSLPQM*LWMEQEPCLSPGES Trigger: AGACTCACCTGGTGACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGACCCTGCACAAAGCCTCCCTCGTATGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
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| 3UTR CCA 90 bp | CACAGCAGGAGACCTATCCCATACACCACTGCCAGGCTTCTGCAGTaGGAGACCCTGGCAGGAGAGCAGCAGGAAAGAGAGGTTGGGCTC | + |
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Preference number: 1 (lower is better) Translates to: HSRRPIPYTTARLLQ*ETLAGEQQEREVGL Trigger: GAGCCCAACCTCTCTTTCCTGCTGCTCTCCTGCCAGGGTCTCCCACTGCAGAAGCCTGGCAGTGGTGTATGGGATAGGTCTCCTGCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
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| 3UTR GCA 90 bp | CCTCACACAGCAGGAGACCTATCCCATACACCACTGCCAGGCTTCTaGAGTGGGAGACCCTGGCAGGAGAGCAGCAGGAAAGAGAGGTTG | + |
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Preference number: 1 (lower is better) Translates to: PHTAGDLSHTPLPGF*SGRPWQESSRKERL Trigger: CAACCTCTCTTTCCTGCTGCTCTCCTGCCAGGGTCTCCCACTGCAGAAGCCTGGCAGTGGTGTATGGGATAGGTCTCCTGCTGTGTGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
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| 3UTR GCA 90 bp | AGAACTCCAGGCTCCGCTAGCACTTGGGCACAAAGGCTCTTGGTTTaGTACTCCCTAGGTCACTGGTGCTTCTCCACCCCCACATCCTTC | + |
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Preference number: 1 (lower is better) Translates to: RTPGSASTWAQRLLV*YSLGHWCFSTPTSF Trigger: GAAGGATGTGGGGGTGGAGAAGCACCAGTGACCTAGGGAGTAGCAAACCAAGAGCCTTTGTGCCCAAGTGCTAGCGGAGCCTGGAGTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
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| 3UTR CCA 90 bp | TCTGTCCAGAGGCCGTATCTCAGAACTCCAGGCTCCGCTAGCACTTaGGCACAAAGGCTCTTGGTTTGCTACTCCCTAGGTCACTGGTGC | + |
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Preference number: 1 (lower is better) Translates to: SVQRPYLRTPGSAST*AQRLLVCYSLGHWC Trigger: GCACCAGTGACCTAGGGAGTAGCAAACCAAGAGCCTTTGTGCCCAAGTGCTAGCGGAGCCTGGAGTTCTGAGATACGGCCTCTGGACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
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| 3UTR TCA 90 bp | CCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCACCAGGTaGGTCTCCTTTCCTGTCAAGAAGCTCCAACTTGGGAAGAGTGTT | + |
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Preference number: 1 (lower is better) Translates to: PDVALDGAGALPVTR*VSFPVKKLQLGKSV Trigger: AACACTCTTCCCAAGTTGGAGCTTCTTGACAGGAAAGGAGACTCACCTGGTGACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
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| 3UTR TCA 90 bp | GCAAATAGCCCTCTCCTCCCTCCCACTTGGTTAGGCTCTTCTTTTTaGATGTGCAGCCTTTGCCTGCTCAGGTTGGCTCCCCTGGTCACC | + |
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Preference number: 1 (lower is better) Translates to: ANSPLLPPTWLGSSF*MCSLCLLRLAPLVT Trigger: GGTGACCAGGGGAGCCAACCTGAGCAGGCAAAGGCTGCACATTCAAAAAGAAGAGCCTAACCAAGTGGGAGGGAGGAGAGGGCTATTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
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| 3UTR GCA 90 bp | ACTTGGGCACAAAGGCTCTTGGTTTGCTACTCCCTAGGTCACTGGTaGTTCTCCACCCCCACATCCTTCGCAAATAGCCCTCTCCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: TWAQRLLVCYSLGHW*FSTPTSFANSPLLP Trigger: AGGGAGGAGAGGGCTATTTGCGAAGGATGTGGGGGTGGAGAAGCACCAGTGACCTAGGGAGTAGCAAACCAAGAGCCTTTGTGCCCAAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
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| 3UTR CCA 90 bp | AGCACTTGGGCACAAAGGCTCTTGGTTTGCTACTCCCTAGGTCACTaGTGCTTCTCCACCCCCACATCCTTCGCAAATAGCCCTCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: STWAQRLLVCYSLGH*CFSTPTSFANSPLL Trigger: GAGGAGAGGGCTATTTGCGAAGGATGTGGGGGTGGAGAAGCACCAGTGACCTAGGGAGTAGCAAACCAAGAGCCTTTGTGCCCAAGTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
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| 3UTR GCA 90 bp | ACTCAGTCTCTAGACCAGGCTGGAACTCAGAGATCTACCTGCCTCTaGCTACCCAGTGTTGGGACTAAAGGTGTGCACTGTTGCAGCCAC | + |
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Preference number: 1 (lower is better) Translates to: TQSLDQAGTQRSTCL*LPSVGTKGVHCCSH Trigger: GTGGCTGCAACAGTGCACACCTTTAGTCCCAACACTGGGTAGGCAGAGGCAGGTAGATCTCTGAGTTCCAGCCTGGTCTAGAGACTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
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| 3UTR GCA 90 bp | TCACCTTCGAGCTGGAGAGAGGTTTGTTCAGCATCCTACAAGCAATaGCAAGTCTTTCTTGGAGCTTTCTTTGGGGCGGCACATGGGCGC | + |
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Preference number: 1 (lower is better) Translates to: SPSSWREVCSASYKQ*QVFLGAFFGAAHGR Trigger: GCGCCCATGTGCCGCCCCAAAGAAAGCTCCAAGAAAGACTTGGCATTGCTTGTAGGATGCTGAACAAACCTCTCTCCAGCTCGAAGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
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| 3UTR TCA 90 bp | TCAAGAAGCTCCAACTTGGGAAGAGTGTTTCAGCCACGGCAGAGATaGCAGAGGAGAGTCTCCTTGGTGAAAGAAGATAACCAAGAGCAC | + |
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Preference number: 1 (lower is better) Translates to: SRSSNLGRVFQPRQR*QRRVSLVKEDNQEH Trigger: GTGCTCTTGGTTATCTTCTTTCACCAAGGAGACTCTCCTCTGTCATCTCTGCCGTGGCTGAAACACTCTTCCCAAGTTGGAGCTTCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCATACACCACTGCCAGGCTTCTGCAGTGGGAGACCCTGGCAGGAGAGCAGCCCCCTTGGCCATGGCTaGCCGGCTGCGGGATTACCA | + |
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Preference number: 2 (lower is better) Translates to: SHTPLPGFCSGRPWQESSPLGHG*PAAGLP Trigger: TGGTAATCCCGCAGCCGGTCAGCCATGGCCAAGGGG...GCTGCTCTCCTGCCAGGGTCTCCCACTGCAGAAGCCTGGCAGTGGTGTATGGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGGGTCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCAGCCACGGCAGAGATaGCAGAGGAGAGTCTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: AGSRCPRCGSGWSRSPACQPRQR*QRRVSL Trigger: CAAGGAGACTCTCCTCTGTCATCTCTGCCGTGGCTG...ACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGACCCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGGTCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCCAGCCACGGCAGAGATaGCAGAGGAGAGTCTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: QGLAAPDVALDGAGALPVQPRQR*QRRVSL Trigger: CAAGGAGACTCTCCTCTGTCATCTCTGCCGTGGCTG...GACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGACCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCTGGCAGGAGAGCAGCAGGAAAGAGAGGTTGGGCTCACCTTCTCCCTTCTAGAGGGTCGGCTGTTGTaGGGTGGTCAAGGCCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: TLAGEQQEREVGLTFSLLEGRLL*GGQGQG Trigger: GCCCTGGCCTTGACCACCCCACAACAGCCGACCCTC...TAGAAGGGAGAAGGTGAGCCCAACCTCTCTTTCCTGCTGCTCTCCTGCCAGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTCTAGACCAGGCTGGAACTCAGAGATCTACCTGCCTCTGCCTACCCAGTGTTCTGTAGCTGCCCTGTaGGGGTCGGCTGTTGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: VSRPGWNSEIYLPLPTQCSVAAL*GSAVVG Trigger: CCCCACAACAGCCGACCCTCACAGGGCAGCTACAGA...ACACTGGGTAGGCAGAGGCAGGTAGATCTCTGAGTTCCAGCCTGGTCTAGAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
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| 3UTR-3UTR GCA 90 bp | ACCCTGGCAGGAGAGCAGCAGGAAAGAGAGGTTGGGCTCACCTTCTCCCTTCTATGTGCAGCCTTTGCCTaGTCAGGTTGGCTCCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: TLAGEQQEREVGLTFSLLCAAFA*SGWLPW Trigger: CCAGGGGAGCCAACCTGAGCAGGCAAAGGCTGCACA...TAGAAGGGAGAAGGTGAGCCCAACCTCTCTTTCCTGCTGCTCTCCTGCCAGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGGTCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCGCATCCTACAAGCAATaGCAAGTCTTTCTTGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: QGLAAPDVALDGAGALPVASYKQ*QVFLGA Trigger: AGCTCCAAGAAAGACTTGGCATTGCTTGTAGGATGC...GACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
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| 3UTR-3UTR CCA 90 bp | CTACCTGCCTCTGCCTACCCAGTGTTGGGACTAAAGGTGTGCACTGTTGCAGCCGGCTCCGCTAGCACTTaGGCACAAAGGCTCTTGGTT | + |
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Preference number: 2 (lower is better) Translates to: LPASAYPVLGLKVCTVAAGSAST*AQRLLV Trigger: AACCAAGAGCCTTTGTGCCCAAGTGCTAGCGGAGCC...GGCTGCAACAGTGCACACCTTTAGTCCCAACACTGGGTAGGCAGAGGCAGGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
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| 3UTR-3UTR GCA 90 bp | CTACCTGCCTCTGCCTACCCAGTGTTGGGACTAAAGGTGTGCACTGTTGCAGCCACCAAAGTGTTGATGTaGCCCTTGGCCATGGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: LPASAYPVLGLKVCTVAATKVLM*PLAMAD Trigger: GTCAGCCATGGCCAAGGGGCACATCAACACTTTGGT...GGCTGCAACAGTGCACACCTTTAGTCCCAACACTGGGTAGGCAGAGGCAGGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTTGACCCCATGGTTCACATGTAACAACTGGCAGCCTCACACAGCAGGAGACGGGGCCAATGATGTGTaGTGGCTCCCTACCTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: VLTPWFTCNNWQPHTAGDGANDV*WLPTSR Trigger: TCTAGAGGTAGGGAGCCATCACACATCATTGGCCCC...GTCTCCTGCTGTGTGAGGCTGCCAGTTGTTACATGTGAACCATGGGGTCAACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
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| 3UTR-3UTR CCA 90 bp | GATGGCTCCCTACCTCTAGACAGAACTGGAAGTCTGGACATTCAATATGATGAGTCGGCTGTTGTGGGGTaGTCAAGGCCAGGGCGCTCA | + |
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Preference number: 2 (lower is better) Translates to: DGSLPLDRTGSLDIQYDESAVVG*SRPGRS Trigger: TGAGCGCCCTGGCCTTGACCACCCCACAACAGCCGA...CTCATCATATTGAATGTCCAGACTTCCAGTTCTGTCTAGAGGTAGGGAGCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
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| 3UTR-3UTR TCA 90 bp | ACCCTGGCAGGAGAGCAGCAGGAAAGAGAGGTTGGGCTCACCTTCTCCCTTCTAAGTAATCTAGAAGGTTaGGTGATGATCACCAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: TLAGEQQEREVGLTFSLLSNLEG*VMITKD Trigger: GTCCTTGGTGATCATCACTCAACCTTCTAGATTACT...TAGAAGGGAGAAGGTGAGCCCAACCTCTCTTTCCTGCTGCTCTCCTGCCAGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTTGACCCCATGGTTCACATGTAACAACTGGCAGCCTCACACAGCAGGAGACTTAGGCTCTTCTTTTTaGATGTGCAGCCTTTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: VLTPWFTCNNWQPHTAGDLGSSF*MCSLCL Trigger: CAGGCAAAGGCTGCACATTCAAAAAGAAGAGCCTAA...GTCTCCTGCTGTGTGAGGCTGCCAGTTGTTACATGTGAACCATGGGGTCAACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAGTGTTTCAGCCACGGCAGAGATGACAGAGGAGAGTCTCCTTGGTGAAAGAATGCCAAGTCTTTCTTaGAGCTTTCTTTGGGGCGGC | + |
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Preference number: 2 (lower is better) Translates to: KSVSATAEMTEESLLGERMPSLS*SFLWGG Trigger: GCCGCCCCAAAGAAAGCTCCAAGAAAGACTTGGCAT...TCTTTCACCAAGGAGACTCTCCTCTGTCATCTCTGCCGTGGCTGAAACACTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
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| 3UTR-3UTR CCA 90 bp | AAAAACCTGCAGTGGCTGCTGAACTTCACCTTCGAGCTGGAGAGAGGTTTGTTCATGCCAAGTCTTTCTTaGAGCTTTCTTTGGGGCGGC | + |
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Preference number: 2 (lower is better) Translates to: KNLQWLLNFTFELERGLFMPSLS*SFLWGG Trigger: GCCGCCCCAAAGAAAGCTCCAAGAAAGACTTGGCAT...GAACAAACCTCTCTCCAGCTCGAAGGTGAAGTTCAGCAGCCACTGCAGGTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
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| 3UTR CAA 90 bp | AACCTGCAGTGGCTGCTGAACTTCACCTTCGAGCTGGAGAGAGGTTaGTTCAGCATCCTACAAGCAATGCCAAGTCTTTCTTGGAGCTTT | + |
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Preference number: 2 (lower is better) Translates to: NLQWLLNFTFELERG*FSILQAMPSLSWSF Trigger: AAAGCTCCAAGAAAGACTTGGCATTGCTTGTAGGATGCTGAACAAACCTCTCTCCAGCTCGAAGGTGAAGTTCAGCAGCCACTGCAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
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| 3UTR-3UTR GCA 90 bp | ATTCTGAACTTCTTCGCTGGCCTGGATAATAGTTCTGAGATACTGAAAAAGGTGTCCCTAGGTCACTGGTaGTTCTCCACCCCCACATCC | + |
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Preference number: 2 (lower is better) Translates to: ILNFFAGLDNSSEILKKVSLGHW*FSTPTS Trigger: GGATGTGGGGGTGGAGAAGCACCAGTGACCTAGGGA...CACCTTTTTCAGTATCTCAGAACTATTATCCAGGCCAGCGAAGAAGTTCAGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTCTAGACCAGGCTGGAACTCAGAGATCTACCTGCCTCTGCCTACCCAGTGTACAGAACTGGAAGTCTaGACATTCAATATGATGAGA | + |
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Preference number: 2 (lower is better) Translates to: VSRPGWNSEIYLPLPTQCTELEV*TFNMMR Trigger: TCTCATCATATTGAATGTCCAGACTTCCAGTTCTGT...ACACTGGGTAGGCAGAGGCAGGTAGATCTCTGAGTTCCAGCCTGGTCTAGAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCATCTCTTTATTGGTAGTTTCTTCTCAGTTACTATTACTTTCATACGAGGGCAGCCACGGCAGAGATaGCAGAGGAGAGTCTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: KHLFIGSFFSVTITFIRGQPRQR*QRRVSL Trigger: CAAGGAGACTCTCCTCTGTCATCTCTGCCGTGGCTG...CCCTCGTATGAAAGTAATAGTAACTGAGAAGAAACTACCAATAAAGAGATGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCATCTCTTTATTGGTAGTTTCTTCTCAGTTACTATTACTTTCATACGAGGGCTGCCTGTCACCAGGTaGGTCTCCTTTCCTGTCAAG | + |
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Preference number: 2 (lower is better) Translates to: KHLFIGSFFSVTITFIRGLPVTR*VSFPVK Trigger: CTTGACAGGAAAGGAGACTCACCTGGTGACAGGCAG...CCCTCGTATGAAAGTAATAGTAACTGAGAAGAAACTACCAATAAAGAGATGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
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| 3UTR-3UTR TCA 90 bp | TTTATTGGTAGTTTCTTCTCAGTTACTATTACTTTCATACGAGGGAGGCTTTGTCTGCCTGTCACCAGGTaGGTCTCCTTTCCTGTCAAG | + |
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Preference number: 2 (lower is better) Translates to: FIGSFFSVTITFIRGRLCLPVTR*VSFPVK Trigger: CTTGACAGGAAAGGAGACTCACCTGGTGACAGGCAG...ACAAAGCCTCCCTCGTATGAAAGTAATAGTAACTGAGAAGAAACTACCAATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
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| 3UTR CAA 90 bp | ATTGTGAATTATAAGCTTGTATACTTATTTTCCACAGTAGCTGTGTaGACCCCATGGTTCACATGTAACAACTGGCAGCCTCACACAGCA | + |
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Preference number: 2 (lower is better) Translates to: IVNYKLVYLFSTVAV*TPWFTCNNWQPHTA Trigger: TGCTGTGTGAGGCTGCCAGTTGTTACATGTGAACCATGGGGTCAACACAGCTACTGTGGAAAATAAGTATACAAGCTTATAATTCACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCATCTCTTTATTGGTAGTTTCTTCTCAGTTACTATTACTTTCATACGAGGGATGCCAAGTCTTTCTTaGAGCTTTCTTTGGGGCGGC | + |
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Preference number: 2 (lower is better) Translates to: KHLFIGSFFSVTITFIRGMPSLS*SFLWGG Trigger: GCCGCCCCAAAGAAAGCTCCAAGAAAGACTTGGCAT...CCCTCGTATGAAAGTAATAGTAACTGAGAAGAAACTACCAATAAAGAGATGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
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| 3UTR CAA 90 bp | TTCATTTCAAACACACAAACTGCTGCTAGCACAAGCATCTCTTTATaGGTAGTTTCTTCTCAGTTACTATTACTTTCATACGAGGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: FISNTQTAASTSISL*VVSSQLLLLSYEGG Trigger: GCCTCCCTCGTATGAAAGTAATAGTAACTGAGAAGAAACTACCAATAAAGAGATGCTTGTGCTAGCAGCAGTTTGTGTGTTTGAAATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032774.16 |
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| 3UTR-3UTR TCA 90 bp | AGAATATTCTTGTGGCTTTTTGAGGACTTGGACATTAGTGTATGGTTGCAGTTGGGTTTACAGCAGAAGTaGGGAGAAGTTTTGAGTTTT | + |
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Preference number: 2 (lower is better) Translates to: RIFLWLFEDLDISVWLQLGLQQK*GEVLSF Trigger: AAAACTCAAAACTTCTCCTCACTTCTGCTGTAAACC...CAACTGCAACCATACACTAATGTCCAAGTCCTCAAAAAGCCACAAGAATATTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
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| 3UTR-3UTR GCA 90 bp | TTTATTGGTAGTTTCTTCTCAGTTACTATTACTTTCATACGAGGGAGGCTTTGTGCATCCTACAAGCAATaGCAAGTCTTTCTTGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: FIGSFFSVTITFIRGRLCASYKQ*QVFLGA Trigger: AGCTCCAAGAAAGACTTGGCATTGCTTGTAGGATGC...ACAAAGCCTCCCTCGTATGAAAGTAATAGTAACTGAGAAGAAACTACCAATAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
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| 3UTR TCA 72 bp | TTCCAGCTGAGTCCAGGTGACTCTGTAGCTGCCCTGTaGGGGTCGGCTGTTGTGGGGTGGTCAAGGCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: FQLSPGDSVAAL*GSAVVGWSRPG Trigger: CCCTGGCCTTGACCACCCCACAACAGCCGACCCTCACAGGGCAGCTACAGAGTCACCTGGACTCAGCTGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
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| 3UTR-3UTR CAA 90 bp | GGGTCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCACGAGCTGGAGAGAGGTTaGTTCAGCATCCTACAAGCA | + |
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Preference number: 3 (lower is better) Translates to: GSRCPRCGSGWSRSPACHELERG*FSILQA Trigger: TGCTTGTAGGATGCTGAACAAACCTCTCTCCAGCTC...GTGACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
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| 3UTR GCA 72 bp | ACTTTCATACGAGGGAGGCTTTGTGCAGGGTCTCGCTaGCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCT | + |
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Preference number: 3 (lower is better) Translates to: TFIRGRLCAGSR*PRCGSGWSRSP Trigger: AGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGACCCTGCACAAAGCCTCCCTCGTATGAAAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
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| 3UTR GCA 72 bp | GGCTCCGCTAGCACTTGGGCACAAAGGCTCTTGGTTTaGTACTCCCTAGGTCACTGGTGCTTCTCCACCCCC | + |
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Preference number: 3 (lower is better) Translates to: GSASTWAQRLLV*YSLGHWCFSTP Trigger: GGGGGTGGAGAAGCACCAGTGACCTAGGGAGTAGCAAACCAAGAGCCTTTGTGCCCAAGTGCTAGCGGAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
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| 3UTR GCA 72 bp | GCAGGAGACCTATCCCATACACCACTGCCAGGCTTCTaGAGTGGGAGACCCTGGCAGGAGAGCAGCAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: AGDLSHTPLPGF*SGRPWQESSRK Trigger: TTTCCTGCTGCTCTCCTGCCAGGGTCTCCCACTGCAGAAGCCTGGCAGTGGTGTATGGGATAGGTCTCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
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| 3UTR-3UTR CAA 90 bp | CTCCATGGAGTCCAGGCAAGCGCTCTGTCCCGGGGCAGCATTGCCAGCTCCAGTAATGCCAAGTCTTTCTaGGAGCTTTCTTTGGGGCGG | + |
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Preference number: 3 (lower is better) Translates to: LHGVQASALSRGSIASSSNAKSF*ELSLGR Trigger: CCGCCCCAAAGAAAGCTCCAAGAAAGACTTGGCATT...ACTGGAGCTGGCAATGCTGCCCCGGGACAGAGCGCTTGCCTGGACTCCATGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032774.16 |
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| 3UTR-3UTR CAA 90 bp | TCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCACCAGAATGCCAAGTCTTTCTaGGAGCTTTCTTTGGGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: SRCPRCGSGWSRSPACHQNAKSF*ELSLGR Trigger: CCGCCCCAAAGAAAGCTCCAAGAAAGACTTGGCATT...CTGGTGACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| 3UTR CCA 72 bp | AGACCTATCCCATACACCACTGCCAGGCTTCTGCAGTaGGAGACCCTGGCAGGAGAGCAGCAGGAAAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RPIPYTTARLLQ*ETLAGEQQERE Trigger: CTCTCTTTCCTGCTGCTCTCCTGCCAGGGTCTCCCACTGCAGAAGCCTGGCAGTGGTGTATGGGATAGGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| 3UTR TCA 72 bp | AGAAGGTTGAGTGATGATCACCAAGGACCAAAGTGTTaGTGTGCCCCTTGGCCATGGCTGACCGGCTGCGGG | + |
|
Preference number: 3 (lower is better) Translates to: RRLSDDHQGPKC*CAPWPWLTGCG Trigger: CCCGCAGCCGGTCAGCCATGGCCAAGGGGCACATCAACACTTTGGTCCTTGGTGATCATCACTCAACCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| 3UTR GCA 72 bp | TGGAGTCCAGGCAAGCGCTCTGTCCCGGGGCAGCATTaGCAGCTCCAGTCTTCATTTCAAACACACAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: WSPGKRSVPGQH*QLQSSFQTHKL Trigger: CAGTTTGTGTGTTTGAAATGAAGACTGGAGCTGGCAATGCTGCCCCGGGACAGAGCGCTTGCCTGGACTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032774.16 |
||
| 3UTR CCA 72 bp | AGGCCGTATCTCAGAACTCCAGGCTCCGCTAGCACTTaGGCACAAAGGCTCTTGGTTTGCTACTCCCTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: RPYLRTPGSAST*AQRLLVCYSLG Trigger: ACCTAGGGAGTAGCAAACCAAGAGCCTTTGTGCCCAAGTGCTAGCGGAGCCTGGAGTTCTGAGATACGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| 3UTR CCA 72 bp | GGAGACCCTGGCAGGAGAGCAGCAGGAAAGAGAGGTTaGGCTCACCTTCTCCCTTCTAGGGTATATTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: GDPGRRAAGKRG*AHLLPSRVYSA Trigger: TGCAGAATATACCCTAGAAGGGAGAAGGTGAGCCCAACCTCTCTTTCCTGCTGCTCTCCTGCCAGGGTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| 3UTR GCA 72 bp | CAAAGGCTCTTGGTTTGCTACTCCCTAGGTCACTGGTaGTTCTCCACCCCCACATCCTTCGCAAATAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: QRLLVCYSLGHW*FSTPTSFANSP Trigger: AGGGCTATTTGCGAAGGATGTGGGGGTGGAGAAGCACCAGTGACCTAGGGAGTAGCAAACCAAGAGCCTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| 3UTR GCA 72 bp | CTAGACCAGGCTGGAACTCAGAGATCTACCTGCCTCTaGCTACCCAGTGTTGGGACTAAAGGTGTGCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: LDQAGTQRSTCL*LPSVGTKGVHC Trigger: ACAGTGCACACCTTTAGTCCCAACACTGGGTAGGCAGAGGCAGGTAGATCTCTGAGTTCCAGCCTGGTCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| 3UTR CCA 72 bp | GCACAAAGGCTCTTGGTTTGCTACTCCCTAGGTCACTaGTGCTTCTCCACCCCCACATCCTTCGCAAATAGC | + |
|
Preference number: 3 (lower is better) Translates to: AQRLLVCYSLGH*CFSTPTSFANS Trigger: GCTATTTGCGAAGGATGTGGGGGTGGAGAAGCACCAGTGACCTAGGGAGTAGCAAACCAAGAGCCTTTGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| 3UTR GCA 72 bp | CTCAGTTACTATTACTTTCATACGAGGGAGGCTTTGTaGAGGGTCTCGCTGCCCCAGATGTGGCTCTGGATG | + |
|
Preference number: 3 (lower is better) Translates to: LSYYYFHTREAL*RVSLPQMWLWM Trigger: CATCCAGAGCCACATCTGGGGCAGCGAGACCCTGCACAAAGCCTCCCTCGTATGAAAGTAATAGTAACTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| 3UTR CCA 72 bp | GTAGCTGTGTTGACCCCATGGTTCACATGTAACAACTaGCAGCCTCACACAGCAGGAGACCTATCCCATACA | + |
|
Preference number: 3 (lower is better) Translates to: VAVLTPWFTCNN*QPHTAGDLSHT Trigger: TGTATGGGATAGGTCTCCTGCTGTGTGAGGCTGCCAGTTGTTACATGTGAACCATGGGGTCAACACAGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| 3UTR GCA 72 bp | AGCTGGAGAGAGGTTTGTTCAGCATCCTACAAGCAATaGCAAGTCTTTCTTGGAGCTTTCTTTGGGGCGGCA | + |
|
Preference number: 3 (lower is better) Translates to: SWREVCSASYKQ*QVFLGAFFGAA Trigger: TGCCGCCCCAAAGAAAGCTCCAAGAAAGACTTGGCATTGCTTGTAGGATGCTGAACAAACCTCTCTCCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| 3UTR TCA 72 bp | TCCAACTTGGGAAGAGTGTTTCAGCCACGGCAGAGATaGCAGAGGAGAGTCTCCTTGGTGAAAGAAGATAAC | + |
|
Preference number: 3 (lower is better) Translates to: SNLGRVFQPRQR*QRRVSLVKEDN Trigger: GTTATCTTCTTTCACCAAGGAGACTCTCCTCTGTCATCTCTGCCGTGGCTGAAACACTCTTCCCAAGTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| 3UTR TCA 72 bp | GAGCAAAGCAACCTCTTAATTGGGGCCAATGATGTGTaGTGGCTCCCTACCTCTAGACAGAACTGGAAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: EQSNLLIGANDV*WLPTSRQNWKS Trigger: AGACTTCCAGTTCTGTCTAGAGGTAGGGAGCCATCACACATCATTGGCCCCAATTAAGAGGTTGCTTTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| 3UTR GCA 72 bp | GCCTGCTCAGGTTGGCTCCCCTGGTCACCTCTAATATaGTCACTTCTTCCCACACTTCACAGTCATATATTT | + |
|
Preference number: 3 (lower is better) Translates to: ACSGWLPWSPLI*SLLPTLHSHIF Trigger: AAATATATGACTGTGAAGTGTGGGAAGAAGTGAGCATATTAGAGGTGACCAGGGGAGCCAACCTGAGCAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAATATTCTTGTGGCTTTTTGAGGACTTGGACATTAGTGTATGGTTGCAGTTGTGGGCACAAAGGCTCTaGGTTTGCTACTCCCTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: RIFLWLFEDLDISVWLQLWAQRL*VCYSLG Trigger: ACCTAGGGAGTAGCAAACCAAGAGCCTTTGTGCCCA...CAACTGCAACCATACACTAATGTCCAAGTCCTCAAAAAGCCACAAGAATATTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTGTGGCTTTTTGAGGACTTGGACATTAGTGTATGGTTGCAGTTGATGAATTCCACAGTAGCTGTGTaGACCCCATGGTTCACATGT | + |
|
Preference number: 3 (lower is better) Translates to: FLWLFEDLDISVWLQLMNSTVAV*TPWFTC Trigger: ACATGTGAACCATGGGGTCAACACAGCTACTGTGGA...ATTCATCAACTGCAACCATACACTAATGTCCAAGTCCTCAAAAAGCCACAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTTATTGGTAGTTTCTTCTCAGTTACTATTACTTTCATACGAGGGAGGCTTAATGCCAAGTCTTTCTaGGAGCTTTCTTTGGGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: LFIGSFFSVTITFIRGRLNAKSF*ELSLGR Trigger: CCGCCCCAAAGAAAGCTCCAAGAAAGACTTGGCATT...AAGCCTCCCTCGTATGAAAGTAATAGTAACTGAGAAGAAACTACCAATAAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| 3UTR TCA 72 bp | ACTTCTTCGCTGGCCTGGATAATAGTTCTGAGATACTaGAAAAGGTGTTACCCTATTCCCAGTCCAATAGAT | + |
|
Preference number: 3 (lower is better) Translates to: TSSLAWIIVLRY*KRCYPIPSPID Trigger: ATCTATTGGACTGGGAATAGGGTAACACCTTTTTCAGTATCTCAGAACTATTATCCAGGCCAGCGAAGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| 3UTR CCA 72 bp | CACAAAGCAAGGTCCCAGCCAAAGATAACAAATCACTaGCTGATTTCTATAGTGCAAATATTCAACACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: HKARSQPKITNH*LISIVQIFNTL Trigger: CAGGGTGTTGAATATTTGCACTATAGAAATCAGCCAGTGATTTGTTATCTTTGGCTGGGACCTTGCTTTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTGATTTCTATAGTGCAAATATTCAACACCCTGACATGACATTCATGAACATTCTGATCAGTGGGATATaGTTTTGCAATAGTAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: ADFYSANIQHPDMTFMNILISGI*FCNSKQ Trigger: CTGCTTACTATTGCAAAACAATATCCCACTGATCAG...AATGTTCATGAATGTCATGTCAGGGTGTTGAATATTTGCACTATAGAAATCAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGGTCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTTCCCTGCGCCAGGTCTaGCCTGCCCAGGGCCCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: AGSRCPRCGSGWSRSPACSLRQV*PAQGPV Trigger: TACCGGGCCCTGGGCAGGGCAGACCTGGCGCAGGGA...ACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGACCCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR GCA 90 bp | TCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCACCAGGCGCCAGGTCTGCCCTaGCCAGGGCCCGGTACGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SRCPRCGSGWSRSPACHQAPGLP*PGPGTF Trigger: AAACGTACCGGGCCCTGGGCAGGGCAGACCTGGCGC...CTGGTGACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGTCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCGAAGTGTGCAGAGTCTaGAGCCTCCTCCGGGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QGLAAPDVALDGAGALPVEVCRV*SLLRGG Trigger: CCCTCCCCGGAGGAGGCTGCAGACTCTGCACACTTC...GACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGACCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGGTCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTAGGTGGCTGGACATGTaGGTGTCCTGGGACTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AGSRCPRCGSGWSRSPACRWLDM*VSWDSC Trigger: GCAGGAGTCCCAGGACACCCACATGTCCAGCCACCT...ACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGACCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGGTCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCAGTCTGCTACACTGTaGCTGCCCTTCCCTGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: AGSRCPRCGSGWSRSPACQSATL*LPFPGM Trigger: CATGCCAGGGAAGGGCAGGCACAGTGTAGCAGACTG...ACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGACCCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGTCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCCTTCGTCTAGGTGGCTaGACATGTGGGTGTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QGLAAPDVALDGAGALPVLRLGG*TCGCPG Trigger: CCCAGGACACCCACATGTCCAGCCACCTAGACGAAG...GACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGACCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CCA 90 bp | GGGTCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCACCTCTCCTCACACAGGTaGAGTTTCTCTCGAGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSRCPRCGSGWSRSPACHLSSHR*SFSRGG Trigger: GCCCCCTCGAGAGAAACTCCACCTGTGTGAGGAGAG...GTGACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR GCA 90 bp | TCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCACCAGCAGTCTGCTACACTGTaGCTGCCCTTCCCTGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: SRCPRCGSGWSRSPACHQQSATL*LPFPGM Trigger: CATGCCAGGGAAGGGCAGGCACAGTGTAGCAGACTG...CTGGTGACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
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| CDS-3UTR CCA 90 bp | TCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCACCAGCTCTCCTCACACAGGTaGAGTTTCTCTCGAGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SRCPRCGSGWSRSPACHQLSSHR*SFSRGG Trigger: GCCCCCTCGAGAGAAACTCCACCTGTGTGAGGAGAG...CTGGTGACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR GCA 90 bp | TCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCACCAGACATCACGGTGGTCGTaGATCCCAGAAGCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRCPRCGSGWSRSPACHQTSRWS*IPEAAA Trigger: TGCTGCTGCTTCTGGGATGCACGACCACCGTGATGT...CTGGTGACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGGTCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCAGCGCACAAGCTCCTaGATGGCCTGTTTGTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGSRCPRCGSGWSRSPACQRTSS*MACLYS Trigger: AGAGTACAAACAGGCCATCCAGGAGCTTGTGCGCTG...ACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGACCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CCA 90 bp | GGGTCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCACTGGCCAGGATCTCCTTaGCTTTCTCTGCATGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSRCPRCGSGWSRSPACHWPGSP*LSLHAA Trigger: AGCAGCATGCAGAGAAAGCCAAGGAGATCCTGGCCA...GTGACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGGTCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTTGGCCAGGATCTCCTTaGCTTTCTCTGCATGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGSRCPRCGSGWSRSPACWPGSP*LSLHAA Trigger: AGCAGCATGCAGAGAAAGCCAAGGAGATCCTGGCCA...ACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGACCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR GCA 90 bp | ACCCTGGCAGGAGAGCAGCAGGAAAGAGAGGTTGGGCTCACCTTCTCCCTTCTAGAAGTGTGCAGAGTCTaGAGCCTCCTCCGGGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLAGEQQEREVGLTFSLLEVCRV*SLLRGG Trigger: CCCTCCCCGGAGGAGGCTGCAGACTCTGCACACTTC...TAGAAGGGAGAAGGTGAGCCCAACCTCTCTTTCCTGCTGCTCTCCTGCCAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| CDS-3UTR GCA 90 bp | TCCCATACACCACTGCCAGGCTTCTGCAGTGGGAGACCCTGGCAGGAGAGCAGCACATCACGGTGGTCGTaGATCCCAGAAGCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SHTPLPGFCSGRPWQESSTSRWS*IPEAAA Trigger: TGCTGCTGCTTCTGGGATGCACGACCACCGTGATGT...GCTGCTCTCCTGCCAGGGTCTCCCACTGCAGAAGCCTGGCAGTGGTGTATGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| CDS-3UTR GCA 90 bp | GCAGTGGCTGCTGAACTTCACCTTCGAGCTGGAGAGAGGTTTGTTCAGCATCCTGCGCCAGGTCTGCCCTaGCCAGGGCCCGGTACGTTT | + |
|
Preference number: 4 (lower is better) Translates to: AVAAELHLRAGERFVQHPAPGLP*PGPGTF Trigger: AAACGTACCGGGCCCTGGGCAGGGCAGACCTGGCGC...AGGATGCTGAACAAACCTCTCTCCAGCTCGAAGGTGAAGTTCAGCAGCCACTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR GCA 90 bp | AGCCTTTGCCTGCTCAGGTTGGCTCCCCTGGTCACCTCTAATATGCTCACTTCTGCGCCAGGTCTGCCCTaGCCAGGGCCCGGTACGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLCLLRLAPLVTSNMLTSAPGLP*PGPGTF Trigger: AAACGTACCGGGCCCTGGGCAGGGCAGACCTGGCGC...AGAAGTGAGCATATTAGAGGTGACCAGGGGAGCCAACCTGAGCAGGCAAAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| CDS-3UTR CCA 90 bp | ATGGAGTCCAGGCAAGCGCTCTGTCCCGGGGCAGCATTGCCAGCTCCAGTCTTCCTATGGTGTGCTGGGTaGCCAGGGTCTTCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MESRQALCPGAALPAPVFLWCAG*PGSSCP Trigger: AGGACAAGAAGACCCTGGCCACCCAGCACACCATAG...GAAGACTGGAGCTGGCAATGCTGCCCCGGGACAGAGCGCTTGCCTGGACTCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032774.16 |
||
| CDS-3UTR GCA 90 bp | AACAGCCTTAAAAACCTGCAGTGGCTGCTGAACTTCACCTTCGAGCTGGAGAGATCCCTGCGCCAGGTCTaGCCTGCCCAGGGCCCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NSLKNLQWLLNFTFELERSLRQV*PAQGPV Trigger: TACCGGGCCCTGGGCAGGGCAGACCTGGCGCAGGGA...TCTCTCCAGCTCGAAGGTGAAGTTCAGCAGCCACTGCAGGTTTTTAAGGCTGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CCA 90 bp | GGGTCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCACCAAATGCTCCTACTTTaGCTTCCAGGGACTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSRCPRCGSGWSRSPACHQMLLL*LPGTLS Trigger: TGAGAGAGTCCCTGGAAGCCAAAGTAGGAGCATTTG...GTGACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR TCA 90 bp | GGGTCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCACGAAGTCATGCTTTCCTaGAAGTATTTCTCGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GSRCPRCGSGWSRSPACHEVMLS*KYFSAT Trigger: TGTGGCCGAGAAATACTTTCAGGAAAGCATGACTTC...GTGACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR GCA 90 bp | GCAGTGGCTGCTGAACTTCACCTTCGAGCTGGAGAGAGGTTTGTTCAGCATCCTGAAGTGTGCAGAGTCTaGAGCCTCCTCCGGGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AVAAELHLRAGERFVQHPEVCRV*SLLRGG Trigger: CCCTCCCCGGAGGAGGCTGCAGACTCTGCACACTTC...AGGATGCTGAACAAACCTCTCTCCAGCTCGAAGGTGAAGTTCAGCAGCCACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR GCA 90 bp | CCTGCCTGTCACCAGGTGAGTCTCCTTTCCTGTCAAGAAGCTCCAACTTGGGAAGAAGTGTGCAGAGTCTaGAGCCTCCTCCGGGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PACHQVSLLSCQEAPTWEEVCRV*SLLRGG Trigger: CCCTCCCCGGAGGAGGCTGCAGACTCTGCACACTTC...TTCCCAAGTTGGAGCTTCTTGACAGGAAAGGAGACTCACCTGGTGACAGGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGTCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCACTGAAGTCACCAAATaGTCCTACTTTGGCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QGLAAPDVALDGAGALPVTEVTK*SYFGFQ Trigger: CTGGAAGCCAAAGTAGGAGCATTTGGTGACTTCAGT...GACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR GCA 90 bp | GCCTTTGCCTGCTCAGGTTGGCTCCCCTGGTCACCTCTAATATGCTCACTTCTTCCACTGTTGTTTCCCTaGGCCAGGTCTGCCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AFACSGWLPWSPLICSLLPLLFP*ARSALP Trigger: GGGCAGGGCAGACCTGGCGCAGGGAAACAACAGTGG...AAGAAGTGAGCATATTAGAGGTGACCAGGGGAGCCAACCTGAGCAGGCAAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGGCTGCTGAACTTCACCTTCGAGCTGGAGAGAGGTTTGTTCAGCATCCTACCCAGGGGACAAGGCTaGGGAGTTGGCAGTCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QWLLNFTFELERGLFSILPRGQG*GVGSRS Trigger: GGACCGACTGCCAACTCCCCAGCCTTGTCCCCTGGG...TAGGATGCTGAACAAACCTCTCTCCAGCTCGAAGGTGAAGTTCAGCAGCCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032774.16 |
||
| CDS-3UTR TCA 90 bp | GGGTCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCACGCTCCAGGGAACACTTaGAGATATCTGTTTTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSRCPRCGSGWSRSPACHAPGNT*RYLFCC Trigger: ACAACAAAACAGATATCTTCAAGTGTTCCCTGGAGC...GTGACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGTCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCGCTCCAGGGAACACTTaGAGATATCTGTTTTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QGLAAPDVALDGAGALPVAPGNT*RYLFCC Trigger: ACAACAAAACAGATATCTTCAAGTGTTCCCTGGAGC...GACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR TCA 90 bp | CCTGCCTGTCACCAGGTGAGTCTCCTTTCCTGTCAAGAAGCTCCAACTTGGGAACCCGTGAGAAATGACTaGTGGCGGCGGCGTAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PACHQVSLLSCQEAPTWEPVRND*WRRRRV Trigger: GACTCTACGCCGCCGCCATCAGTCATTTCTCACGGG...TTCCCAAGTTGGAGCTTCTTGACAGGAAAGGAGACTCACCTGGTGACAGGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGGTCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCTGCAAAACTCATCTTaGATCGAAAGGAACTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGSRCPRCGSGWSRSPACLQNSS*IERNLA Trigger: AGCCAAGTTCCTTTCGATTCAAGATGAGTTTTGCAG...ACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGACCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR GCA 90 bp | TCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCACCAGTTGGCTTTCTCTGCATaGTGCTTTGCTTGTAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SRCPRCGSGWSRSPACHQLAFSA*CFACSD Trigger: GTCACTACAAGCAAAGCAGCATGCAGAGAAAGCCAA...CTGGTGACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR GCA 90 bp | TCCATGGAGTCCAGGCAAGCGCTCTGTCCCGGGGCAGCATTGCCAGCTCCAGTCACTGAAGTCACCAAATaGTCCTACTTTGGCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SMESRQALCPGAALPAPVTEVTK*SYFGFQ Trigger: CTGGAAGCCAAAGTAGGAGCATTTGGTGACTTCAGT...GACTGGAGCTGGCAATGCTGCCCCGGGACAGAGCGCTTGCCTGGACTCCATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032774.16 |
||
| CDS-3UTR GCA 90 bp | GGGCATTCACAATTGGGGTGTGGAAGATTCATGGTACTGCCATTGCATTCTGAATCCCTGCGCCAGGTCTaGCCTGCCCAGGGCCCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GHSQLGCGRFMVLPLHSESLRQV*PAQGPV Trigger: TACCGGGCCCTGGGCAGGGCAGACCTGGCGCAGGGA...TTCAGAATGCAATGGCAGTACCATGAATCTTCCACACCCCAATTGTGAATGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR TCA 90 bp | CTGTCCCGGGGCAGCATTGCCAGCTCCAGTCTTCATTTCAAACACACAAACTGCTTTCACCGATTGCCTTaGCTTCCCGGCAGCCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSRGSIASSSLHFKHTNCFHRLP*LPGSLG Trigger: TCCGAGGCTGCCGGGAAGTCAAGGCAATCGGTGAAA...GCAGTTTGTGTGTTTGAAATGAAGACTGGAGCTGGCAATGCTGCCCCGGGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032774.16 |
||
| CDS-3UTR GCA 90 bp | AAAAACCTGCAGTGGCTGCTGAACTTCACCTTCGAGCTGGAGAGAGGTTTGTTCCCACTGTTGTTTCCCTaGGCCAGGTCTGCCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KNLQWLLNFTFELERGLFPLLFP*ARSALP Trigger: GGGCAGGGCAGACCTGGCGCAGGGAAACAACAGTGG...GAACAAACCTCTCTCCAGCTCGAAGGTGAAGTTCAGCAGCCACTGCAGGTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGGCTGCTGAACTTCACCTTCGAGCTGGAGAGAGGTTTGTTCAGCATCCTAAGGTGGCTGGACATGTaGGTGTCCTGGGACTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QWLLNFTFELERGLFSILRWLDM*VSWDSC Trigger: GCAGGAGTCCCAGGACACCCACATGTCCAGCCACCT...TAGGATGCTGAACAAACCTCTCTCCAGCTCGAAGGTGAAGTTCAGCAGCCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| 3UTR CAA 72 bp | CCCTCTCCTCCCTCCCACTTGGTTAGGCTCTTCTTTTaGAATGTGCAGCCTTTGCCTGCTCAGGTTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSPPSHLVRLFF*NVQPLPAQVGS Trigger: GGAGCCAACCTGAGCAGGCAAAGGCTGCACATTCAAAAAGAAGAGCCTAACCAAGTGGGAGGGAGGAGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| 3UTR CAA 72 bp | GAACTCAGAGATCTACCTGCCTCTGCCTACCCAGTGTaGGGACTAAAGGTGTGCACTGTTGCAGCCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: ELRDLPASAYPV*GLKVCTVAATT Trigger: GGTGGTGGCTGCAACAGTGCACACCTTTAGTCCCAACACTGGGTAGGCAGAGGCAGGTAGATCTCTGAGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGTCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCTGGTTTGCAGAAAACTaGAAAACTCATCTTGAATCG | + |
|
Preference number: 4 (lower is better) Translates to: QGLAAPDVALDGAGALPVWFAEN*KTHLES Trigger: CGATTCAAGATGAGTTTTGCAGTTTTCTGCAAACCA...GACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCCTGTCACCAGGTGAGTCTCCTTTCCTGTCAAGAAGCTCCAACTTGGGAAACGACTTCGTCTAGGTaGCTGGACATGTGGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PACHQVSLLSCQEAPTWETTSSR*LDMWVS Trigger: GGACACCCACATGTCCAGCCACCTAGACGAAGTCGT...TTCCCAAGTTGGAGCTTCTTGACAGGAAAGGAGACTCACCTGGTGACAGGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTGGCTGCTGAACTTCACCTTCGAGCTGGAGAGAGGTTTGTTCAGCATCCTGCACAAGCTCCTGGATaGCCTGTTTGTACTCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: AVAAELHLRAGERFVQHPAQAPG*PVCTLG Trigger: GCCGAGAGTACAAACAGGCCATCCAGGAGCTTGTGC...AGGATGCTGAACAAACCTCTCTCCAGCTCGAAGGTGAAGTTCAGCAGCCACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGGCTGCTGAACTTCACCTTCGAGCTGGAGAGAGGTTTGTTCAGCATCCTATGGACAGTGTGTCTATaGTGTGCTGGGTGGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QWLLNFTFELERGLFSILWTVCL*CAGWPG Trigger: CCCTGGCCACCCAGCACACCATAGACACACTGTCCA...TAGGATGCTGAACAAACCTCTCTCCAGCTCGAAGGTGAAGTTCAGCAGCCACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR TCA 90 bp | TACAAGCAATGCCAAGTCTTTCTTGGAGCTTTCTTTGGGGCGGCACATGGGCGCCTGCCACCTCAGGACTaGAGTCACCAAATGCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: YKQCQVFLGAFFGAAHGRLPPQD*SHQMLL Trigger: TAGGAGCATTTGGTGACTTCAGTCCTGAGGTGGCAG...GCGCCCATGTGCCGCCCCAAAGAAAGCTCCAAGAAAGACTTGGCATTGCTTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR TCA 90 bp | AGCCTTTGCCTGCTCAGGTTGGCTCCCCTGGTCACCTCTAATATGCTCACTTCTTCTCCATGTGGCCTTTaGGGAATCCCTGTGGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLCLLRLAPLVTSNMLTSSPCGL*GIPVAL Trigger: AAGAGCCACAGGGATTCCTCAAAGGCCACATGGAGA...AGAAGTGAGCATATTAGAGGTGACCAGGGGAGCCAACCTGAGCAGGCAAAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| CDS-3UTR GCA 90 bp | CCTGCCTGTCACCAGGTGAGTCTCCTTTCCTGTCAAGAAGCTCCAACTTGGGAAGCTGGAGTAGGACTTTaGTCTCTCCTCACACAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PACHQVSLLSCQEAPTWEAGVGL*SLLTQV Trigger: CACCTGTGTGAGGAGAGAGCAAAGTCCTACTCCAGC...TTCCCAAGTTGGAGCTTCTTGACAGGAAAGGAGACTCACCTGGTGACAGGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR GCA 90 bp | TTGTTCAGCATCCTACAAGCAATGCCAAGTCTTTCTTGGAGCTTTCTTTGGGGCCCACTGTTGTTTCCCTaGGCCAGGTCTGCCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LFSILQAMPSLSWSFLWGPLLFP*ARSALP Trigger: GGGCAGGGCAGACCTGGCGCAGGGAAACAACAGTGG...GCCCCAAAGAAAGCTCCAAGAAAGACTTGGCATTGCTTGTAGGATGCTGAACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGTGTTTCAGCCACGGCAGAGATGACAGAGGAGAGTCTCCTTGGTGAAAGACTCTCCTCACACAGGTaGAGTTTCTCTCGAGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KSVSATAEMTEESLLGERLSSHR*SFSRGG Trigger: GCCCCCTCGAGAGAAACTCCACCTGTGTGAGGAGAG...TCTTTCACCAAGGAGACTCTCCTCTGTCATCTCTGCCGTGGCTGAAACACTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CCA 90 bp | TCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCACCAGTTTCTTTTTGTCCGGTaGTTTGCAGAAAACTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SRCPRCGSGWSRSPACHQFLFVR*FAENCK Trigger: TTTGCAGTTTTCTGCAAACCACCGGACAAAAAGAAA...CTGGTGACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CCA 90 bp | AACAGCCTTAAAAACCTGCAGTGGCTGCTGAACTTCACCTTCGAGCTGGAGAGATGGACAGTGTGTCTATaGTGTGCTGGGTGGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NSLKNLQWLLNFTFELERWTVCL*CAGWPG Trigger: CCCTGGCCACCCAGCACACCATAGACACACTGTCCA...TCTCTCCAGCTCGAAGGTGAAGTTCAGCAGCCACTGCAGGTTTTTAAGGCTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR GCA 90 bp | TGGAGTCCAGGCAAGCGCTCTGTCCCGGGGCAGCATTGCCAGCTCCAGTCTTCATGGTTTGCAGAAAACTaGAAAACTCATCTTGAATCG | + |
|
Preference number: 4 (lower is better) Translates to: WSPGKRSVPGQHCQLQSSWFAEN*KTHLES Trigger: CGATTCAAGATGAGTTTTGCAGTTTTCTGCAAACCA...TGAAGACTGGAGCTGGCAATGCTGCCCCGGGACAGAGCGCTTGCCTGGACTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032774.16 |
||
| CDS-3UTR CCA 90 bp | TGTTCAGCATCCTACAAGCAATGCCAAGTCTTTCTTGGAGCTTTCTTTGGGGCGCTTCGTCTAGGTGGCTaGACATGTGGGTGTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CSASYKQCQVFLGAFFGALRLGG*TCGCPG Trigger: CCCAGGACACCCACATGTCCAGCCACCTAGACGAAG...CGCCCCAAAGAAAGCTCCAAGAAAGACTTGGCATTGCTTGTAGGATGCTGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
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| CDS-3UTR CCA 90 bp | AAGAGTGTTTCAGCCACGGCAGAGATGACAGAGGAGAGTCTCCTTGGTGAAAGAGCACAAGCTCCTGGATaGCCTGTTTGTACTCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: KSVSATAEMTEESLLGERAQAPG*PVCTLG Trigger: GCCGAGAGTACAAACAGGCCATCCAGGAGCTTGTGC...TCTTTCACCAAGGAGACTCTCCTCTGTCATCTCTGCCGTGGCTGAAACACTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGGCTGCTGAACTTCACCTTCGAGCTGGAGAGAGGTTTGTTCAGCATCCTACAGCGCACAAGCTCCTaGATGGCCTGTTTGTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: QWLLNFTFELERGLFSILQRTSS*MACLYS Trigger: AGAGTACAAACAGGCCATCCAGGAGCTTGTGCGCTG...TAGGATGCTGAACAAACCTCTCTCCAGCTCGAAGGTGAAGTTCAGCAGCCACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CCA 90 bp | AACAGCCTTAAAAACCTGCAGTGGCTGCTGAACTTCACCTTCGAGCTGGAGAGACTATGGTGTGCTGGGTaGCCAGGGTCTTCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NSLKNLQWLLNFTFELERLWCAG*PGSSCP Trigger: AGGACAAGAAGACCCTGGCCACCCAGCACACCATAG...TCTCTCCAGCTCGAAGGTGAAGTTCAGCAGCCACTGCAGGTTTTTAAGGCTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR TCA 90 bp | GGGCAGCATTGCCAGCTCCAGTCTTCATTTCAAACACACAAACTGCTGCTAGCACTGCCACCTCAGGACTaGAGTCACCAAATGCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: GQHCQLQSSFQTHKLLLALPPQD*SHQMLL Trigger: TAGGAGCATTTGGTGACTTCAGTCCTGAGGTGGCAG...TGCTAGCAGCAGTTTGTGTGTTTGAAATGAAGACTGGAGCTGGCAATGCTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032774.16 |
||
| CDS-3UTR TCA 90 bp | AAGAGTGTTTCAGCCACGGCAGAGATGACAGAGGAGAGTCTCCTTGGTGAAAGACTGCCACCTCAGGACTaGAGTCACCAAATGCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: KSVSATAEMTEESLLGERLPPQD*SHQMLL Trigger: TAGGAGCATTTGGTGACTTCAGTCCTGAGGTGGCAG...TCTTTCACCAAGGAGACTCTCCTCTGTCATCTCTGCCGTGGCTGAAACACTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR TCA 90 bp | TCTGAAGTAAACAGCCTTAAAAACCTGCAGTGGCTGCTGAACTTCACCTTCGAGTTTCACCGATTGCCTTaGCTTCCCGGCAGCCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SEVNSLKNLQWLLNFTFEFHRLP*LPGSLG Trigger: TCCGAGGCTGCCGGGAAGTCAAGGCAATCGGTGAAA...CTCGAAGGTGAAGTTCAGCAGCCACTGCAGGTTTTTAAGGCTGTTTACTTCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR GCA 90 bp | AACAGCCTTAAAAACCTGCAGTGGCTGCTGAACTTCACCTTCGAGCTGGAGAGAGCTGGAGTAGGACTTTaGTCTCTCCTCACACAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NSLKNLQWLLNFTFELERAGVGL*SLLTQV Trigger: CACCTGTGTGAGGAGAGAGCAAAGTCCTACTCCAGC...TCTCTCCAGCTCGAAGGTGAAGTTCAGCAGCCACTGCAGGTTTTTAAGGCTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGTGTTTCAGCCACGGCAGAGATGACAGAGGAGAGTCTCCTTGGTGAAAGAGCTGGAGTAGGACTTTaGTCTCTCCTCACACAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KSVSATAEMTEESLLGERAGVGL*SLLTQV Trigger: CACCTGTGTGAGGAGAGAGCAAAGTCCTACTCCAGC...TCTTTCACCAAGGAGACTCTCCTCTGTCATCTCTGCCGTGGCTGAAACACTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGTGTTTCAGCCACGGCAGAGATGACAGAGGAGAGTCTCCTTGGTGAAAGACCTCATCCACCTGACTaGTGTAGAAGGGTCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: KSVSATAEMTEESLLGERPHPPD*CRRVSM Trigger: CATGGAGACCCTTCTACAGCAGTCAGGTGGATGAGG...TCTTTCACCAAGGAGACTCTCCTCTGTCATCTCTGCCGTGGCTGAAACACTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032774.16 |
||
| CDS-3UTR CCA 90 bp | GTGTTGACCCCATGGTTCACATGTAACAACTGGCAGCCTCACACAGCAGGAGACCAAATGCTCCTACTTTaGCTTCCAGGGACTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLTPWFTCNNWQPHTAGDQMLLL*LPGTLS Trigger: TGAGAGAGTCCCTGGAAGCCAAAGTAGGAGCATTTG...GTCTCCTGCTGTGTGAGGCTGCCAGTTGTTACATGTGAACCATGGGGTCAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| CDS-3UTR TCA 90 bp | AGCCTTTGCCTGCTCAGGTTGGCTCCCCTGGTCACCTCTAATATGCTCACTTCTGAAGTCATGCTTTCCTaGAAGTATTTCTCGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SLCLLRLAPLVTSNMLTSEVMLS*KYFSAT Trigger: TGTGGCCGAGAAATACTTTCAGGAAAGCATGACTTC...AGAAGTGAGCATATTAGAGGTGACCAGGGGAGCCAACCTGAGCAGGCAAAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| CDS-3UTR GCA 90 bp | TCTGAAGTAAACAGCCTTAAAAACCTGCAGTGGCTGCTGAACTTCACCTTCGAGACATCACGGTGGTCGTaGATCCCAGAAGCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SEVNSLKNLQWLLNFTFETSRWS*IPEAAA Trigger: TGCTGCTGCTTCTGGGATGCACGACCACCGTGATGT...CTCGAAGGTGAAGTTCAGCAGCCACTGCAGGTTTTTAAGGCTGTTTACTTCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR GCA 90 bp | GCTGATTTCTATAGTGCAAATATTCAACACCCTGACATGACATTCATGAACATTTCCCTGCGCCAGGTCTaGCCTGCCCAGGGCCCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ADFYSANIQHPDMTFMNISLRQV*PAQGPV Trigger: TACCGGGCCCTGGGCAGGGCAGACCTGGCGCAGGGA...AATGTTCATGAATGTCATGTCAGGGTGTTGAATATTTGCACTATAGAAATCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| CDS-3UTR GCA 90 bp | AAAAACCTGCAGTGGCTGCTGAACTTCACCTTCGAGCTGGAGAGAGGTTTGTTCGGCACTGGTGCAGAATaGTACTTTGGCTTTCACCGA | + |
|
Preference number: 4 (lower is better) Translates to: KNLQWLLNFTFELERGLFGTGAE*YFGFHR Trigger: TCGGTGAAAGCCAAAGTAGCATTCTGCACCAGTGCC...GAACAAACCTCTCTCCAGCTCGAAGGTGAAGTTCAGCAGCCACTGCAGGTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR GCA 90 bp | AACAGCCTTAAAAACCTGCAGTGGCTGCTGAACTTCACCTTCGAGCTGGAGAGAGGCACTGGTGCAGAATaGTACTTTGGCTTTCACCGA | + |
|
Preference number: 4 (lower is better) Translates to: NSLKNLQWLLNFTFELERGTGAE*YFGFHR Trigger: TCGGTGAAAGCCAAAGTAGCATTCTGCACCAGTGCC...TCTCTCCAGCTCGAAGGTGAAGTTCAGCAGCCACTGCAGGTTTTTAAGGCTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CCA 90 bp | GGGCATTCACAATTGGGGTGTGGAAGATTCATGGTACTGCCATTGCATTCTGAAACGACTTCGTCTAGGTaGCTGGACATGTGGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GHSQLGCGRFMVLPLHSETTSSR*LDMWVS Trigger: GGACACCCACATGTCCAGCCACCTAGACGAAGTCGT...TTCAGAATGCAATGGCAGTACCATGAATCTTCCACACCCCAATTGTGAATGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CCA 90 bp | GGGCATTCACAATTGGGGTGTGGAAGATTCATGGTACTGCCATTGCATTCTGAAGCACAAGCTCCTGGATaGCCTGTTTGTACTCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GHSQLGCGRFMVLPLHSEAQAPG*PVCTLG Trigger: GCCGAGAGTACAAACAGGCCATCCAGGAGCTTGTGC...TTCAGAATGCAATGGCAGTACCATGAATCTTCCACACCCCAATTGTGAATGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCAGCATCCTACAAGCAATGCCAAGTCTTTCTTGGAGCTTTCTTTGGGGCGCAGCGCACAAGCTCCTaGATGGCCTGTTTGTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSASYKQCQVFLGAFFGAQRTSS*MACLYS Trigger: AGAGTACAAACAGGCCATCCAGGAGCTTGTGCGCTG...CGCCCCAAAGAAAGCTCCAAGAAAGACTTGGCATTGCTTGTAGGATGCTGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CCA 90 bp | TCTGAAGTAAACAGCCTTAAAAACCTGCAGTGGCTGCTGAACTTCACCTTCGAGCTATGGTGTGCTGGGTaGCCAGGGTCTTCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SEVNSLKNLQWLLNFTFELWCAG*PGSSCP Trigger: AGGACAAGAAGACCCTGGCCACCCAGCACACCATAG...CTCGAAGGTGAAGTTCAGCAGCCACTGCAGGTTTTTAAGGCTGTTTACTTCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCCCGGGGCAGCATTGCCAGCTCCAGTCTTCATTTCAAACACACAAACTGCTGCAGAATGCTACTTTaGCTTTCACCGATTGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSRGSIASSSLHFKHTNCCRMLL*LSPIAL Trigger: CAAGGCAATCGGTGAAAGCCAAAGTAGCATTCTGCA...GCAGTTTGTGTGTTTGAAATGAAGACTGGAGCTGGCAATGCTGCCCCGGGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032774.16 |
||
| CDS-3UTR CCA 90 bp | TACAAGCAATGCCAAGTCTTTCTTGGAGCTTTCTTTGGGGCGGCACATGGGCGCTGCAGAATGCTACTTTaGCTTTCACCGATTGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YKQCQVFLGAFFGAAHGRCRMLL*LSPIAL Trigger: CAAGGCAATCGGTGAAAGCCAAAGTAGCATTCTGCA...GCGCCCATGTGCCGCCCCAAAGAAAGCTCCAAGAAAGACTTGGCATTGCTTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR TCA 90 bp | CTGTCCCGGGGCAGCATTGCCAGCTCCAGTCTTCATTTCAAACACACAAACTGCGCTCCAGGGAACACTTaGAGATATCTGTTTTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSRGSIASSSLHFKHTNCAPGNT*RYLFCC Trigger: ACAACAAAACAGATATCTTCAAGTGTTCCCTGGAGC...GCAGTTTGTGTGTTTGAAATGAAGACTGGAGCTGGCAATGCTGCCCCGGGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032774.16 |
||
| CDS-3UTR TCA 90 bp | TTGGTAGTTTCTTCTCAGTTACTATTACTTTCATACGAGGGAGGCTTTGTGCAGCCCGTGAGAAATGACTaGTGGCGGCGGCGTAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVVSSQLLLLSYEGGFVQPVRND*WRRRRV Trigger: GACTCTACGCCGCCGCCATCAGTCATTTCTCACGGG...CTGCACAAAGCCTCCCTCGTATGAAAGTAATAGTAACTGAGAAGAAACTACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR TCA 90 bp | TACAAGCAATGCCAAGTCTTTCTTGGAGCTTTCTTTGGGGCGGCACATGGGCGCCTGCAAAACTCATCTTaGATCGAAAGGAACTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YKQCQVFLGAFFGAAHGRLQNSS*IERNLA Trigger: AGCCAAGTTCCTTTCGATTCAAGATGAGTTTTGCAG...GCGCCCATGTGCCGCCCCAAAGAAAGCTCCAAGAAAGACTTGGCATTGCTTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTGGTAGTTTCTTCTCAGTTACTATTACTTTCATACGAGGGAGGCTTTGTGCGCCAGGTCTGCCCTaGCCAGGGCCCGGTACGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FIGSFFSVTITFIRGRLCAPGLP*PGPGTF Trigger: AAACGTACCGGGCCCTGGGCAGGGCAGACCTGGCGC...ACAAAGCCTCCCTCGTATGAAAGTAATAGTAACTGAGAAGAAACTACCAATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CCA 90 bp | TCTGAAGTAAACAGCCTTAAAAACCTGCAGTGGCTGCTGAACTTCACCTTCGAGTGGCCAGGATCTCCTTaGCTTTCTCTGCATGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SEVNSLKNLQWLLNFTFEWPGSP*LSLHAA Trigger: AGCAGCATGCAGAGAAAGCCAAGGAGATCCTGGCCA...CTCGAAGGTGAAGTTCAGCAGCCACTGCAGGTTTTTAAGGCTGTTTACTTCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CCA 90 bp | AACAGCCTTAAAAACCTGCAGTGGCTGCTGAACTTCACCTTCGAGCTGGAGAGACAAATGCTCCTACTTTaGCTTCCAGGGACTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NSLKNLQWLLNFTFELERQMLLL*LPGTLS Trigger: TGAGAGAGTCCCTGGAAGCCAAAGTAGGAGCATTTG...TCTCTCCAGCTCGAAGGTGAAGTTCAGCAGCCACTGCAGGTTTTTAAGGCTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR TCA 90 bp | AACAGCCTTAAAAACCTGCAGTGGCTGCTGAACTTCACCTTCGAGCTGGAGAGAGAAGTCATGCTTTCCTaGAAGTATTTCTCGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: NSLKNLQWLLNFTFELEREVMLS*KYFSAT Trigger: TGTGGCCGAGAAATACTTTCAGGAAAGCATGACTTC...TCTCTCCAGCTCGAAGGTGAAGTTCAGCAGCCACTGCAGGTTTTTAAGGCTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR GCA 90 bp | AACAGCCTTAAAAACCTGCAGTGGCTGCTGAACTTCACCTTCGAGCTGGAGAGATTGGCTTTCTCTGCATaGTGCTTTGCTTGTAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: NSLKNLQWLLNFTFELERLAFSA*CFACSD Trigger: GTCACTACAAGCAAAGCAGCATGCAGAGAAAGCCAA...TCTCTCCAGCTCGAAGGTGAAGTTCAGCAGCCACTGCAGGTTTTTAAGGCTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTTATTGGTAGTTTCTTCTCAGTTACTATTACTTTCATACGAGGGAGGCTTCCACTGTTGTTTCCCTaGGCCAGGTCTGCCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LFIGSFFSVTITFIRGRLPLLFP*ARSALP Trigger: GGGCAGGGCAGACCTGGCGCAGGGAAACAACAGTGG...AAGCCTCCCTCGTATGAAAGTAATAGTAACTGAGAAGAAACTACCAATAAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR TCA 90 bp | AAAAACCTGCAGTGGCTGCTGAACTTCACCTTCGAGCTGGAGAGAGGTTTGTTCCTGCAAAACTCATCTTaGATCGAAAGGAACTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KNLQWLLNFTFELERGLFLQNSS*IERNLA Trigger: AGCCAAGTTCCTTTCGATTCAAGATGAGTTTTGCAG...GAACAAACCTCTCTCCAGCTCGAAGGTGAAGTTCAGCAGCCACTGCAGGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR GCA 90 bp | GTGTTGACCCCATGGTTCACATGTAACAACTGGCAGCCTCACACAGCAGGAGACTGGTTTGCAGAAAACTaGAAAACTCATCTTGAATCG | + |
|
Preference number: 4 (lower is better) Translates to: VLTPWFTCNNWQPHTAGDWFAEN*KTHLES Trigger: CGATTCAAGATGAGTTTTGCAGTTTTCTGCAAACCA...GTCTCCTGCTGTGTGAGGCTGCCAGTTGTTACATGTGAACCATGGGGTCAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| CDS-3UTR CCA 90 bp | TTGTTCAGCATCCTACAAGCAATGCCAAGTCTTTCTTGGAGCTTTCTTTGGGGCCAAATGCTCCTACTTTaGCTTCCAGGGACTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LFSILQAMPSLSWSFLWGQMLLL*LPGTLS Trigger: TGAGAGAGTCCCTGGAAGCCAAAGTAGGAGCATTTG...GCCCCAAAGAAAGCTCCAAGAAAGACTTGGCATTGCTTGTAGGATGCTGAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR TCA 90 bp | GGGCATTCACAATTGGGGTGTGGAAGATTCATGGTACTGCCATTGCATTCTGAAGAAGTCATGCTTTCCTaGAAGTATTTCTCGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GHSQLGCGRFMVLPLHSEEVMLS*KYFSAT Trigger: TGTGGCCGAGAAATACTTTCAGGAAAGCATGACTTC...TTCAGAATGCAATGGCAGTACCATGAATCTTCCACACCCCAATTGTGAATGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR TCA 90 bp | ATTCTGAACTTCTTCGCTGGCCTGGATAATAGTTCTGAGATACTGAAAAAGGTGCTGCCACCTCAGGACTaGAGTCACCAAATGCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: ILNFFAGLDNSSEILKKVLPPQD*SHQMLL Trigger: TAGGAGCATTTGGTGACTTCAGTCCTGAGGTGGCAG...CACCTTTTTCAGTATCTCAGAACTATTATCCAGGCCAGCGAAGAAGTTCAGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| CDS-3UTR TCA 90 bp | CTGAGAGATGGGTTTACAGCAGAAGTGAGGAGAAGTTTTGAGTTTTACAATTCAGTAGCCACCTACAGGTaGGAGTCTGTCTCCATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRDGFTAEVRRSFEFYNSVATYR*ESVSMW Trigger: CCACATGGAGACAGACTCTCACCTGTAGGTGGCTAC...TGAATTGTAAAACTCAAAACTTCTCCTCACTTCTGCTGTAAACCCATCTCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| CDS-3UTR GCA 90 bp | GATGGCTCCCTACCTCTAGACAGAACTGGAAGTCTGGACATTCAATATGATGAGACTGAAGTCACCAAATaGTCCTACTTTGGCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DGSLPLDRTGSLDIQYDETEVTK*SYFGFQ Trigger: CTGGAAGCCAAAGTAGGAGCATTTGGTGACTTCAGT...CTCATCATATTGAATGTCCAGACTTCCAGTTCTGTCTAGAGGTAGGGAGCCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| CDS-3UTR TCA 90 bp | GATGGCTCCCTACCTCTAGACAGAACTGGAAGTCTGGACATTCAATATGATGAGCTGCAAAACTCATCTTaGATCGAAAGGAACTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DGSLPLDRTGSLDIQYDELQNSS*IERNLA Trigger: AGCCAAGTTCCTTTCGATTCAAGATGAGTTTTGCAG...CTCATCATATTGAATGTCCAGACTTCCAGTTCTGTCTAGAGGTAGGGAGCCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| CDS-3UTR TCA 90 bp | AAGCATCTCTTTATTGGTAGTTTCTTCTCAGTTACTATTACTTTCATACGAGGGTTTCACCGATTGCCTTaGCTTCCCGGCAGCCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: KHLFIGSFFSVTITFIRGFHRLP*LPGSLG Trigger: TCCGAGGCTGCCGGGAAGTCAAGGCAATCGGTGAAA...CCCTCGTATGAAAGTAATAGTAACTGAGAAGAAACTACCAATAAAGAGATGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR GCA 90 bp | AAGCATCTCTTTATTGGTAGTTTCTTCTCAGTTACTATTACTTTCATACGAGGGCAGTCTGCTACACTGTaGCTGCCCTTCCCTGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: KHLFIGSFFSVTITFIRGQSATL*LPFPGM Trigger: CATGCCAGGGAAGGGCAGGCACAGTGTAGCAGACTG...CCCTCGTATGAAAGTAATAGTAACTGAGAAGAAACTACCAATAAAGAGATGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTGGTAGTTTCTTCTCAGTTACTATTACTTTCATACGAGGGAGGCTTTGTCTTCGTCTAGGTGGCTaGACATGTGGGTGTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FIGSFFSVTITFIRGRLCLRLGG*TCGCPG Trigger: CCCAGGACACCCACATGTCCAGCCACCTAGACGAAG...ACAAAGCCTCCCTCGTATGAAAGTAATAGTAACTGAGAAGAAACTACCAATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTTATTGGTAGTTTCTTCTCAGTTACTATTACTTTCATACGAGGGAGGCTTACGACTTCGTCTAGGTaGCTGGACATGTGGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LFIGSFFSVTITFIRGRLTTSSR*LDMWVS Trigger: GGACACCCACATGTCCAGCCACCTAGACGAAGTCGT...AAGCCTCCCTCGTATGAAAGTAATAGTAACTGAGAAGAAACTACCAATAAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CCA 90 bp | AAGCATCTCTTTATTGGTAGTTTCTTCTCAGTTACTATTACTTTCATACGAGGGTGGACAGTGTGTCTATaGTGTGCTGGGTGGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KHLFIGSFFSVTITFIRGWTVCL*CAGWPG Trigger: CCCTGGCCACCCAGCACACCATAGACACACTGTCCA...CCCTCGTATGAAAGTAATAGTAACTGAGAAGAAACTACCAATAAAGAGATGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTGGTAGTTTCTTCTCAGTTACTATTACTTTCATACGAGGGAGGCTTTGTACATCACGGTGGTCGTaGATCCCAGAAGCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FIGSFFSVTITFIRGRLCTSRWS*IPEAAA Trigger: TGCTGCTGCTTCTGGGATGCACGACCACCGTGATGT...ACAAAGCCTCCCTCGTATGAAAGTAATAGTAACTGAGAAGAAACTACCAATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCAGCATCCTACAAGCAATGCCAAGTCTTTCTTGGAGCTTTCTTTGGGGCGTTTCTTTTTGTCCGGTaGTTTGCAGAAAACTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: CSASYKQCQVFLGAFFGAFLFVR*FAENCK Trigger: TTTGCAGTTTTCTGCAAACCACCGGACAAAAAGAAA...CGCCCCAAAGAAAGCTCCAAGAAAGACTTGGCATTGCTTGTAGGATGCTGAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTGTGGCTTTTTGAGGACTTGGACATTAGTGTATGGTTGCAGTTGATGAATGAGTCTGTCTCCATGTaGCCTTTGAGGAATCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLWLFEDLDISVWLQLMNESVSM*PLRNPC Trigger: ACAGGGATTCCTCAAAGGCCACATGGAGACAGACTC...ATTCATCAACTGCAACCATACACTAATGTCCAAGTCCTCAAAAAGCCACAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| CDS-3UTR GCA 90 bp | CTCTTTATTGGTAGTTTCTTCTCAGTTACTATTACTTTCATACGAGGGAGGCTTCAGGATGATGAGATGTaGCTCTTCCTCATCCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFIGSFFSVTITFIRGRLQDDEM*LFLIHL Trigger: CAGGTGGATGAGGAAGAGGCACATCTCATCATCCTG...AAGCCTCCCTCGTATGAAAGTAATAGTAACTGAGAAGAAACTACCAATAAAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032774.16 |
||
| CDS-3UTR GCA 90 bp | TCTGAAGTAAACAGCCTTAAAAACCTGCAGTGGCTGCTGAACTTCACCTTCGAGTGGTTTGCAGAAAACTaGAAAACTCATCTTGAATCG | + |
|
Preference number: 4 (lower is better) Translates to: SEVNSLKNLQWLLNFTFEWFAEN*KTHLES Trigger: CGATTCAAGATGAGTTTTGCAGTTTTCTGCAAACCA...CTCGAAGGTGAAGTTCAGCAGCCACTGCAGGTTTTTAAGGCTGTTTACTTCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| 3UTR CAA 72 bp | TATAAGCTTGTATACTTATTTTCCACAGTAGCTGTGTaGACCCCATGGTTCACATGTAACAACTGGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YKLVYLFSTVAV*TPWFTCNNWQP Trigger: AGGCTGCCAGTTGTTACATGTGAACCATGGGGTCAACACAGCTACTGTGGAAAATAAGTATACAAGCTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| CDS-3UTR GCA 90 bp | CTCTTTATTGGTAGTTTCTTCTCAGTTACTATTACTTTCATACGAGGGAGGCTTACTGAAGTCACCAAATaGTCCTACTTTGGCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFIGSFFSVTITFIRGRLTEVTK*SYFGFQ Trigger: CTGGAAGCCAAAGTAGGAGCATTTGGTGACTTCAGT...AAGCCTCCCTCGTATGAAAGTAATAGTAACTGAGAAGAAACTACCAATAAAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CCA 90 bp | ACAATCCACAAAGCAAGGTCCCAGCCAAAGATAACAAATCACTGGCTGATTTCTTTTCTTTTTGTCCGGTaGTTTGCAGAAAACTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TIHKARSQPKITNHWLISFLFVR*FAENCK Trigger: TTTGCAGTTTTCTGCAAACCACCGGACAAAAAGAAA...AGAAATCAGCCAGTGATTTGTTATCTTTGGCTGGGACCTTGCTTTGTGGATTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| CDS-3UTR CCA 90 bp | TTTATTGGTAGTTTCTTCTCAGTTACTATTACTTTCATACGAGGGAGGCTTTGTTGCAGAATGCTACTTTaGCTTTCACCGATTGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FIGSFFSVTITFIRGRLCCRMLL*LSPIAL Trigger: CAAGGCAATCGGTGAAAGCCAAAGTAGCATTCTGCA...ACAAAGCCTCCCTCGTATGAAAGTAATAGTAACTGAGAAGAAACTACCAATAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | CTCCATGGAGTCCAGGCAAGCGCTCTGTCCCGGGGCAGCATTGCCAGCTCCAGTGACAAGGCTGGGGAGTaGGCAGTCGGTCCCGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LHGVQASALSRGSIASSSDKAGE*AVGPVR Trigger: TCTCACGGGACCGACTGCCAACTCCCCAGCCTTGTC...ACTGGAGCTGGCAATGCTGCCCCGGGACAGAGCGCTTGCCTGGACTCCATGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032774.16 |
||
| CDS-3UTR CAA 90 bp | GGGTCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCACGCGTACGCTCCACTGTaGTTTCCCTGCGCCAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GSRCPRCGSGWSRSPACHAYAPL*FPCARS Trigger: AGACCTGGCGCAGGGAAACAACAGTGGAGCGTACGC...GTGACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS TCA 90 bp | GGGGACAAGGCTGGGGAGTTGGCAGTCGGTCCCGTGAGAAATGACTaGTGGCGGCGGCGTAGAGTCCTAGGGCTTGCTCCACACCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GDKAGELAVGPVRND*WRRRRVLGLAPHLP Trigger: TGGCAGGTGTGGAGCAAGCCCTAGGACTCTACGCCGCCGCCATCAGTCATTTCTCACGGGACCGACTGCCAACTCCCCAGCCTTGTCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032774.16 |
||
| CDS TCA 90 bp | CATCACGGTGGTCGTGCATCCCAGAAGCAGCAGCAGCCCGGGCGATaGAGTGTGCAGAGTCTGCAGCCTCCTCCGGGGAGGGATCTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: HHGGRASQKQQQPGR*SVQSLQPPPGRDLY Trigger: GTAAAGATCCCTCCCCGGAGGAGGCTGCAGACTCTGCACACTTCATCGCCCGGGCTGCTGCTGCTTCTGGGATGCACGACCACCGTGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 ENSMUST00000208764.2 |
||
| CDS GCA 90 bp | CTGTGGCTCTTCTTTAGCTTCGCGTACGCTCCACTGTTGTTTCCCTaGGCCAGGTCTGCCCTGCCCAGGGCCCGGTACGTTTCTGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: LWLFFSFAYAPLLFP*ARSALPRARYVSAT Trigger: GGTGGCAGAAACGTACCGGGCCCTGGGCAGGGCAGACCTGGCGCAGGGAAACAACAGTGGAGCGTACGCGAAGCTAAAGAAGAGCCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGTCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCTTGGCCAGGATCTCCTaGGCTTTCTCTGCATGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QGLAAPDVALDGAGALPVLARIS*AFSACC Trigger: GCAGCATGCAGAGAAAGCCAAGGAGATCCTGGCCAA...GACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGACCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS GCA 90 bp | GTGGTCGTGCATCCCAGAAGCAGCAGCAGCCCGGGCGATGAAGTGTaGAGAGTCTGCAGCCTCCTCCGGGGAGGGATCTTTACTCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VVVHPRSSSSPGDEV*RVCSLLRGGIFTQD Trigger: ATCCTGAGTAAAGATCCCTCCCCGGAGGAGGCTGCAGACTCTGCACACTTCATCGCCCGGGCTGCTGCTGCTTCTGGGATGCACGACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 ENSMUST00000208764.2 |
||
| CDS GCA 90 bp | TGGACACACTTCTTTAGCTTCGCGTACGCTCCACTGTTGTTTCCCTaGGCCAGGTCTGCCCTGCCCAGGGCCCGGTACGTTTCTGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: WTHFFSFAYAPLLFP*ARSALPRARYVSAT Trigger: GGTGGCAGAAACGTACCGGGCCCTGGGCAGGGCAGACCTGGCGCAGGGAAACAACAGTGGAGCGTACGCGAAGCTAAAGAAGTGTGTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGTCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCTGCTGGAGTAGGACTTaGCTCTCTCCTCACACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: QGLAAPDVALDGAGALPVCWSRT*LSPHTG Trigger: ACCTGTGTGAGGAGAGAGCAAAGTCCTACTCCAGCA...GACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGACCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | ATGGAGTCCAGGCAAGCGCTCTGTCCCGGGGCAGCATTGCCAGCTCCAGTCTTCGGACTCTCGATGGAGTaGGCCAGGATCTCCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: MESRQALCPGAALPAPVFGLSME*ARISLA Trigger: AGCCAAGGAGATCCTGGCCAACTCCATCGAGAGTCC...GAAGACTGGAGCTGGCAATGCTGCCCCGGGACAGAGCGCTTGCCTGGACTCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032774.16 |
||
| CDS-3UTR CAA 90 bp | CAGGGTCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCGGCCGCTCTTTCTTTTaGTCCGGTGGTTTGCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QGLAAPDVALDGAGALPVGRSFF*SGGLQK Trigger: TTTCTGCAAACCACCGGACAAAAAGAAAGAGCGGCC...GACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGACCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | TCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCACCAGGTGGCCAGGGTCTTCTaGTCCTGTGATCCATACAAG | + |
|
Preference number: 5 (lower is better) Translates to: SRCPRCGSGWSRSPACHQVARVF*SCDPYK Trigger: CTTGTATGGATCACAGGACAAGAAGACCCTGGCCAC...CTGGTGACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | ATGGAGTCCAGGCAAGCGCTCTGTCCCGGGGCAGCATTGCCAGCTCCAGTCTTCTGCTGGAGTAGGACTTaGCTCTCTCCTCACACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: MESRQALCPGAALPAPVFCWSRT*LSPHTG Trigger: ACCTGTGTGAGGAGAGAGCAAAGTCCTACTCCAGCA...GAAGACTGGAGCTGGCAATGCTGCCCCGGGACAGAGCGCTTGCCTGGACTCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032774.16 |
||
| CDS GCA 90 bp | CAGGGCCCGGTACGTTTCTGCCACCTCAGGACTGAAGTCACCAAATaGTCCTACTTTGGCTTCCAGGGACTCTCTCAGGATCATGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: QGPVRFCHLRTEVTK*SYFGFQGLSQDHGR Trigger: GCGGCCATGATCCTGAGAGAGTCCCTGGAAGCCAAAGTAGGAGCATTTGGTGACTTCAGTCCTGAGGTGGCAGAAACGTACCGGGCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 ENSMUST00000208764.2 |
||
| CDS-3UTR CAA 90 bp | GGGTCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCACCATTGCAGCATCTCCTaGGAAAGTCTCTCTGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GSRCPRCGSGWSRSPACHHCSIS*ESLSAF Trigger: AAAAGCAGAGAGACTTTCCAAGGAGATGCTGCAATG...GTGACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS GCA 90 bp | CTCCTGGATGGCCTGTTTGTACTCTCGGCTGCTGGAGTAGGACTTTaGTCTCTCCTCACACAGGTGGAGTTTCTCTCGAGGGGGCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLDGLFVLSAAGVGL*SLLTQVEFLSRGLE Trigger: TTCCAGCCCCCTCGAGAGAAACTCCACCTGTGTGAGGAGAGAGCAAAGTCCTACTCCAGCAGCCGAGAGTACAAACAGGCCATCCAGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS CCA 90 bp | TGGCTTTCACCGATTGCCTTGACTTCCCGGCAGCCTCGGAGATCTTaGACAGTGTGTCTATGGTGTGCTGGGTGGCCAGGGTCTTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: WLSPIALTSRQPRRS*TVCLWCAGWPGSSC Trigger: ACAAGAAGACCCTGGCCACCCAGCACACCATAGACACACTGTCCAAGATCTCCGAGGCTGCCGGGAAGTCAAGGCAATCGGTGAAAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | GGGTCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCACAGCTCCAGGGAACACTaGAAGATATCTGTTTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GSRCPRCGSGWSRSPACHSSREH*KISVLL Trigger: CAACAAAACAGATATCTTCAAGTGTTCCCTGGAGCT...GTGACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | TCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCACCAGCATTGCAGCATCTCCTaGGAAAGTCTCTCTGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SRCPRCGSGWSRSPACHQHCSIS*ESLSAF Trigger: AAAAGCAGAGAGACTTTCCAAGGAGATGCTGCAATG...CTGGTGACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGTCTCGCTGCCCCAGATGTGGCTCTGGATGGAGCAGGAGCCCTGCCTGTCACGGGAAAGCTTCTTTaGATCTCTTCTGACCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: QGLAAPDVALDGAGALPVTGKLL*ISSDLD Trigger: ATCAAGGTCAGAAGAGATCAAAAGAAGCTTTCCCGT...GACAGGCAGGGCTCCTGCTCCATCCAGAGCCACATCTGGGGCAGCGAGACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS TCA 90 bp | CACCTGACTGCTGTAGAAGGGTCTCCATGTGACATTAAGGACTGGTaGCAAGAACGGAGAGGGGCAGCAGCACTTGTGTCCCAGGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: HLTAVEGSPCDIKDW*QERRGAAALVSQGT Trigger: TGTCCCCTGGGACACAAGTGCTGCTGCCCCTCTCCGTTCTTGTCACCAGTCCTTAATGTCACATGGAGACCCTTCTACAGCAGTCAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032774.16 |
||
| CDS GCA 90 bp | GACTTCCCGGCAGCCTCGGAGATCTTGGACAGTGTGTCTATGGTGTaGTGGGTGGCCAGGGTCTTCTTGTCCTGTGATCCATACAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: DFPAASEILDSVSMV*WVARVFLSCDPYKN Trigger: GTTCTTGTATGGATCACAGGACAAGAAGACCCTGGCCACCCAGCACACCATAGACACACTGTCCAAGATCTCCGAGGCTGCCGGGAAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | CTCCATGGAGTCCAGGCAAGCGCTCTGTCCCGGGGCAGCATTGCCAGCTCCAGTAGCTCCAGGGAACACTaGAAGATATCTGTTTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LHGVQASALSRGSIASSSSSREH*KISVLL Trigger: CAACAAAACAGATATCTTCAAGTGTTCCCTGGAGCT...ACTGGAGCTGGCAATGCTGCCCCGGGACAGAGCGCTTGCCTGGACTCCATGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032774.16 |
||
| CDS GCA 90 bp | TGCAGCCTCCTCCGGGGAGGGATCTTTACTCAGGATGATGAGATGTaGCTCTTCCTCATCCACCTGACTGCTGTAGAAGGGTCTCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: CSLLRGGIFTQDDEM*LFLIHLTAVEGSPC Trigger: ACATGGAGACCCTTCTACAGCAGTCAGGTGGATGAGGAAGAGGCACATCTCATCATCCTGAGTAAAGATCCCTCCCCGGAGGAGGCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032774.16 |
||
| CDS-3UTR CAA 90 bp | TCACCAAGGACCAAAGTGTTGATGTGCCCCTTGGCCATGGCTGACCGGCTGCGGTACAATGTTCCCACATaGCAGCATCTCCTTGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SPRTKVLMCPLAMADRLRYNVPT*QHLLGK Trigger: CTTTCCAAGGAGATGCTGCAATGTGGGAACATTGTA...CCGCAGCCGGTCAGCCATGGCCAAGGGGCACATCAACACTTTGGTCCTTGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| CDS-3UTR CAA 90 bp | GCCTTTGCCTGCTCAGGTTGGCTCCCCTGGTCACCTCTAATATGCTCACTTCTTGTCTCCATGTGGCCTTaGAGGAATCCCTGTGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AFACSGWLPWSPLICSLLVSMWP*RNPCGS Trigger: AGAGCCACAGGGATTCCTCAAAGGCCACATGGAGAC...AAGAAGTGAGCATATTAGAGGTGACCAGGGGAGCCAACCTGAGCAGGCAAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| CDS CCA 90 bp | CTACAGGTGAGAGTCTGTCTCCATGTGGCCTTTGAGGAATCCCTGTaGCTCTTCTTTAGCTTCGCGTACGCTCCACTGTTGTTTCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LQVRVCLHVAFEESL*LFFSFAYAPLLFPC Trigger: GCAGGGAAACAACAGTGGAGCGTACGCGAAGCTAAAGAAGAGCCACAGGGATTCCTCAAAGGCCACATGGAGACAGACTCTCACCTGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| CDS-3UTR CAA 90 bp | GCAGTGGCTGCTGAACTTCACCTTCGAGCTGGAGAGAGGTTTGTTCAGCATCCTCCAAATGCTCCTACTTaGGCTTCCAGGGACTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: AVAAELHLRAGERFVQHPPNAPT*ASRDSL Trigger: GAGAGAGTCCCTGGAAGCCAAAGTAGGAGCATTTGG...AGGATGCTGAACAAACCTCTCTCCAGCTCGAAGGTGAAGTTCAGCAGCCACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | TGTTCAGCATCCTACAAGCAATGCCAAGTCTTTCTTGGAGCTTTCTTTGGGGCGGCGTACGCTCCACTGTaGTTTCCCTGCGCCAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: CSASYKQCQVFLGAFFGAAYAPL*FPCARS Trigger: AGACCTGGCGCAGGGAAACAACAGTGGAGCGTACGC...CGCCCCAAAGAAAGCTCCAAGAAAGACTTGGCATTGCTTGTAGGATGCTGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | CTGTCCCGGGGCAGCATTGCCAGCTCCAGTCTTCATTTCAAACACACAAACTGCGTGGCCAGGGTCTTCTaGTCCTGTGATCCATACAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSRGSIASSSLHFKHTNCVARVF*SCDPYK Trigger: CTTGTATGGATCACAGGACAAGAAGACCCTGGCCAC...GCAGTTTGTGTGTTTGAAATGAAGACTGGAGCTGGCAATGCTGCCCCGGGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032774.16 |
||
| CDS-3UTR CAA 90 bp | CAGTGGCTGCTGAACTTCACCTTCGAGCTGGAGAGAGGTTTGTTCAGCATCCTACCAAATGCTCCTACTTaGGCTTCCAGGGACTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QWLLNFTFELERGLFSILPNAPT*ASRDSL Trigger: GAGAGAGTCCCTGGAAGCCAAAGTAGGAGCATTTGG...TAGGATGCTGAACAAACCTCTCTCCAGCTCGAAGGTGAAGTTCAGCAGCCACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS TCA 90 bp | TCACACAGGTGGAGTTTCTCTCGAGGGGGCTGGAACAGTGCTGTCTaGAGCAGCTTATTCGGGATCCTGTTTTTAGAAGTGACGCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: SHRWSFSRGGWNSAV*SSLFGILFLEVTLT Trigger: TGTCAGCGTCACTTCTAAAAACAGGATCCCGAATAAGCTGCTTCAGACAGCACTGTTCCAGCCCCCTCGAGAGAAACTCCACCTGTGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS CCA 90 bp | CATAGCAAATTCTTGTTAGTGCCACACAGCGCACAAGCTCCTGGATaGCCTGTTTGTACTCTCGGCTGCTGGAGTAGGACTTTGCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HSKFLLVPHSAQAPG*PVCTLGCWSRTLLS Trigger: AGAGAGCAAAGTCCTACTCCAGCAGCCGAGAGTACAAACAGGCCATCCAGGAGCTTGTGCGCTGTGTGGCACTAACAAGAATTTGCTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | AAAAACCTGCAGTGGCTGCTGAACTTCACCTTCGAGCTGGAGAGAGGTTTGTTCTGCTGGAGTAGGACTTaGCTCTCTCCTCACACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: KNLQWLLNFTFELERGLFCWSRT*LSPHTG Trigger: ACCTGTGTGAGGAGAGAGCAAAGTCCTACTCCAGCA...GAACAAACCTCTCTCCAGCTCGAAGGTGAAGTTCAGCAGCCACTGCAGGTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | CAGTGGCTGCTGAACTTCACCTTCGAGCTGGAGAGAGGTTTGTTCAGCATCCTACGCCATAGCAAATTCTaGTTAGTGCCACACAGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: QWLLNFTFELERGLFSILRHSKF*LVPHSA Trigger: TGCGCTGTGTGGCACTAACAAGAATTTGCTATGGCG...TAGGATGCTGAACAAACCTCTCTCCAGCTCGAAGGTGAAGTTCAGCAGCCACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | TGTTCAGCATCCTACAAGCAATGCCAAGTCTTTCTTGGAGCTTTCTTTGGGGCGTTGGCCAGGATCTCCTaGGCTTTCTCTGCATGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CSASYKQCQVFLGAFFGALARIS*AFSACC Trigger: GCAGCATGCAGAGAAAGCCAAGGAGATCCTGGCCAA...CGCCCCAAAGAAAGCTCCAAGAAAGACTTGGCATTGCTTGTAGGATGCTGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | TTGTTCAGCATCCTACAAGCAATGCCAAGTCTTTCTTGGAGCTTTCTTTGGGGCGGACTCTCGATGGAGTaGGCCAGGATCTCCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LFSILQAMPSLSWSFLWGGLSME*ARISLA Trigger: AGCCAAGGAGATCCTGGCCAACTCCATCGAGAGTCC...GCCCCAAAGAAAGCTCCAAGAAAGACTTGGCATTGCTTGTAGGATGCTGAACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | AAAAACCTGCAGTGGCTGCTGAACTTCACCTTCGAGCTGGAGAGAGGTTTGTTCCCAAATGCTCCTACTTaGGCTTCCAGGGACTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KNLQWLLNFTFELERGLFPNAPT*ASRDSL Trigger: GAGAGAGTCCCTGGAAGCCAAAGTAGGAGCATTTGG...GAACAAACCTCTCTCCAGCTCGAAGGTGAAGTTCAGCAGCCACTGCAGGTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS TCA 90 bp | GCTCTTTCCGCTCCTTCGGAATCCTTGATAGAAGTCATGCTTTCCTaGAAGTATTTCTCGGCCACATCACGGTGGTCGTGCATCCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ALSAPSESLIEVMLS*KYFSATSRWSCIPE Trigger: TTCTGGGATGCACGACCACCGTGATGTGGCCGAGAAATACTTTCAGGAAAGCATGACTTCTATCAAGGATTCCGAAGGAGCGGAAAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 ENSMUST00000208764.2 |
||
| CDS-3UTR CAA 90 bp | GGGCAGCATTGCCAGCTCCAGTCTTCATTTCAAACACACAAACTGCTGCTAGCACGCCATAGCAAATTCTaGTTAGTGCCACACAGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: GQHCQLQSSFQTHKLLLARHSKF*LVPHSA Trigger: TGCGCTGTGTGGCACTAACAAGAATTTGCTATGGCG...TGCTAGCAGCAGTTTGTGTGTTTGAAATGAAGACTGGAGCTGGCAATGCTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032774.16 |
||
| CDS-3UTR CAA 90 bp | GCAGTGGCTGCTGAACTTCACCTTCGAGCTGGAGAGAGGTTTGTTCAGCATCCTCATTGCAGCATCTCCTaGGAAAGTCTCTCTGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: AVAAELHLRAGERFVQHPHCSIS*ESLSAF Trigger: AAAAGCAGAGAGACTTTCCAAGGAGATGCTGCAATG...AGGATGCTGAACAAACCTCTCTCCAGCTCGAAGGTGAAGTTCAGCAGCCACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | AACAGCCTTAAAAACCTGCAGTGGCTGCTGAACTTCACCTTCGAGCTGGAGAGAGGCCGCTCTTTCTTTTaGTCCGGTGGTTTGCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: NSLKNLQWLLNFTFELERGRSFF*SGGLQK Trigger: TTTCTGCAAACCACCGGACAAAAAGAAAGAGCGGCC...TCTCTCCAGCTCGAAGGTGAAGTTCAGCAGCCACTGCAGGTTTTTAAGGCTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | GATGGCTCCCTACCTCTAGACAGAACTGGAAGTCTGGACATTCAATATGATGAGCCAAATGCTCCTACTTaGGCTTCCAGGGACTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: DGSLPLDRTGSLDIQYDEPNAPT*ASRDSL Trigger: GAGAGAGTCCCTGGAAGCCAAAGTAGGAGCATTTGG...CTCATCATATTGAATGTCCAGACTTCCAGTTCTGTCTAGAGGTAGGGAGCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| CDS-3UTR CAA 90 bp | TTGGTAGTTTCTTCTCAGTTACTATTACTTTCATACGAGGGAGGCTTTGTGCAGGCGTACGCTCCACTGTaGTTTCCCTGCGCCAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LVVSSQLLLLSYEGGFVQAYAPL*FPCARS Trigger: AGACCTGGCGCAGGGAAACAACAGTGGAGCGTACGC...CTGCACAAAGCCTCCCTCGTATGAAAGTAATAGTAACTGAGAAGAAACTACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | ATTCTGAACTTCTTCGCTGGCCTGGATAATAGTTCTGAGATACTGAAAAAGGTGGCGTACGCTCCACTGTaGTTTCCCTGCGCCAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: ILNFFAGLDNSSEILKKVAYAPL*FPCARS Trigger: AGACCTGGCGCAGGGAAACAACAGTGGAGCGTACGC...CACCTTTTTCAGTATCTCAGAACTATTATCCAGGCCAGCGAAGAAGTTCAGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| CDS-3UTR CAA 90 bp | TCTGAAGTAAACAGCCTTAAAAACCTGCAGTGGCTGCTGAACTTCACCTTCGAGGTGGCCAGGGTCTTCTaGTCCTGTGATCCATACAAG | + |
|
Preference number: 5 (lower is better) Translates to: SEVNSLKNLQWLLNFTFEVARVF*SCDPYK Trigger: CTTGTATGGATCACAGGACAAGAAGACCCTGGCCAC...CTCGAAGGTGAAGTTCAGCAGCCACTGCAGGTTTTTAAGGCTGTTTACTTCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | TGTTCAGCATCCTACAAGCAATGCCAAGTCTTTCTTGGAGCTTTCTTTGGGGCGGGCGTCTTTAAATTTTaGAAGGGAGAGCAGCGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CSASYKQCQVFLGAFFGAGVFKF*KGEQRS Trigger: AGAGCGCTGCTCTCCCTTCAAAAATTTAAAGACGCC...CGCCCCAAAGAAAGCTCCAAGAAAGACTTGGCATTGCTTGTAGGATGCTGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | AAAAACCTGCAGTGGCTGCTGAACTTCACCTTCGAGCTGGAGAGAGGTTTGTTCTACAATGTTCCCACATaGCAGCATCTCCTTGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KNLQWLLNFTFELERGLFYNVPT*QHLLGK Trigger: CTTTCCAAGGAGATGCTGCAATGTGGGAACATTGTA...GAACAAACCTCTCTCCAGCTCGAAGGTGAAGTTCAGCAGCCACTGCAGGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | AACAGCCTTAAAAACCTGCAGTGGCTGCTGAACTTCACCTTCGAGCTGGAGAGATACAATGTTCCCACATaGCAGCATCTCCTTGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: NSLKNLQWLLNFTFELERYNVPT*QHLLGK Trigger: CTTTCCAAGGAGATGCTGCAATGTGGGAACATTGTA...TCTCTCCAGCTCGAAGGTGAAGTTCAGCAGCCACTGCAGGTTTTTAAGGCTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | AAGCATCTCTTTATTGGTAGTTTCTTCTCAGTTACTATTACTTTCATACGAGGGGAGGGGCAGCAGCACTaGTGTCCCAGGGGACAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: KHLFIGSFFSVTITFIRGEGQQH*CPRGQG Trigger: GCCTTGTCCCCTGGGACACAAGTGCTGCTGCCCCTC...CCCTCGTATGAAAGTAATAGTAACTGAGAAGAAACTACCAATAAAGAGATGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032774.16 |
||
| CDS-3UTR CAA 90 bp | AAGAGTGTTTCAGCCACGGCAGAGATGACAGAGGAGAGTCTCCTTGGTGAAAGAAGCTCCAGGGAACACTaGAAGATATCTGTTTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KSVSATAEMTEESLLGERSSREH*KISVLL Trigger: CAACAAAACAGATATCTTCAAGTGTTCCCTGGAGCT...TCTTTCACCAAGGAGACTCTCCTCTGTCATCTCTGCCGTGGCTGAAACACTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | TTGTTCAGCATCCTACAAGCAATGCCAAGTCTTTCTTGGAGCTTTCTTTGGGGCGGCGTCTTTAAATTTTaGAAGGGAGAGCAGCGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LFSILQAMPSLSWSFLWGGVFKF*KGEQRS Trigger: AGAGCGCTGCTCTCCCTTCAAAAATTTAAAGACGCC...GCCCCAAAGAAAGCTCCAAGAAAGACTTGGCATTGCTTGTAGGATGCTGAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | AACAGCCTTAAAAACCTGCAGTGGCTGCTGAACTTCACCTTCGAGCTGGAGAGAACGGGAAAGCTTCTTTaGATCTCTTCTGACCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: NSLKNLQWLLNFTFELERTGKLL*ISSDLD Trigger: ATCAAGGTCAGAAGAGATCAAAAGAAGCTTTCCCGT...TCTCTCCAGCTCGAAGGTGAAGTTCAGCAGCCACTGCAGGTTTTTAAGGCTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | TTGTTCAGCATCCTACAAGCAATGCCAAGTCTTTCTTGGAGCTTTCTTTGGGGCTACAATGTTCCCACATaGCAGCATCTCCTTGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LFSILQAMPSLSWSFLWGYNVPT*QHLLGK Trigger: CTTTCCAAGGAGATGCTGCAATGTGGGAACATTGTA...GCCCCAAAGAAAGCTCCAAGAAAGACTTGGCATTGCTTGTAGGATGCTGAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | AAGCATCTCTTTATTGGTAGTTTCTTCTCAGTTACTATTACTTTCATACGAGGGGGACTCTCGATGGAGTaGGCCAGGATCTCCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KHLFIGSFFSVTITFIRGGLSME*ARISLA Trigger: AGCCAAGGAGATCCTGGCCAACTCCATCGAGAGTCC...CCCTCGTATGAAAGTAATAGTAACTGAGAAGAAACTACCAATAAAGAGATGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | AGAATATTCTTGTGGCTTTTTGAGGACTTGGACATTAGTGTATGGTTGCAGTTGGGCCGCTCTTTCTTTTaGTCCGGTGGTTTGCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RIFLWLFEDLDISVWLQLGRSFF*SGGLQK Trigger: TTTCTGCAAACCACCGGACAAAAAGAAAGAGCGGCC...CAACTGCAACCATACACTAATGTCCAAGTCCTCAAAAAGCCACAAGAATATTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| CDS GCA 90 bp | CGAGACTGGATTTCTATCCACTCTTCCTTTACAATGTTCCCACATTaGAGCATCTCCTTGGAAAGTCTCTCTGCTTTTATCAAGTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RDWISIHSSFTMFPH*SISLESLSAFIKFS Trigger: AGAGAACTTGATAAAAGCAGAGAGACTTTCCAAGGAGATGCTGCAATGTGGGAACATTGTAAAGGAAGAGTGGATAGAAATCCAGTCTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 ENSMUST00000208764.2 |
||
| CDS TCA 90 bp | CTTTTGATCTCTTCTGACCTTGATACAACTGTGCAAACGACAGCTTaGTTCGAGACTGGATTTCTATCCACTCTTCCTTTACAATGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLISSDLDTTVQTTA*FETGFLSTLPLQCS Trigger: GGAACATTGTAAAGGAAGAGTGGATAGAAATCCAGTCTCGAATCAAGCTGTCGTTTGCACAGTTGTATCAAGGTCAGAAGAGATCAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 ENSMUST00000208764.2 |
||
| CDS TCA 90 bp | CTCGGTATATTCCAAAGCCTTTTGATAGAACGGGAAAGCTTCTTTTaGTCTCTTCTGACCTTGATACAACTGTGCAAACGACAGCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LGIFQSLLIERESFF*SLLTLIQLCKRQLD Trigger: ATCAAGCTGTCGTTTGCACAGTTGTATCAAGGTCAGAAGAGATCAAAAGAAGCTTTCCCGTTCTATCAAAAGGCTTTGGAATATACCGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 ENSMUST00000208764.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTGTGGCTTTTTGAGGACTTGGACATTAGTGTATGGTTGCAGTTGATGAATCATTGCAGCATCTCCTaGGAAAGTCTCTCTGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: FLWLFEDLDISVWLQLMNHCSIS*ESLSAF Trigger: AAAAGCAGAGAGACTTTCCAAGGAGATGCTGCAATG...ATTCATCAACTGCAACCATACACTAATGTCCAAGTCCTCAAAAAGCCACAAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| CDS-3UTR CAA 90 bp | TTGGTAGTTTCTTCTCAGTTACTATTACTTTCATACGAGGGAGGCTTTGTGCAGACGGGAAAGCTTCTTTaGATCTCTTCTGACCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LVVSSQLLLLSYEGGFVQTGKLL*ISSDLD Trigger: ATCAAGGTCAGAAGAGATCAAAAGAAGCTTTCCCGT...CTGCACAAAGCCTCCCTCGTATGAAAGTAATAGTAACTGAGAAGAAACTACCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | TTGGTAGTTTCTTCTCAGTTACTATTACTTTCATACGAGGGAGGCTTTGTGCAGACTGCAAAACTCATCTaGAATCGAAAGGAACTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LVVSSQLLLLSYEGGFVQTAKLI*NRKELG Trigger: GCCAAGTTCCTTTCGATTCAAGATGAGTTTTGCAGT...CTGCACAAAGCCTCCCTCGTATGAAAGTAATAGTAACTGAGAAGAAACTACCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | TTTATTGGTAGTTTCTTCTCAGTTACTATTACTTTCATACGAGGGAGGCTTTGTGGCCGCTCTTTCTTTTaGTCCGGTGGTTTGCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: FIGSFFSVTITFIRGRLCGRSFF*SGGLQK Trigger: TTTCTGCAAACCACCGGACAAAAAGAAAGAGCGGCC...ACAAAGCCTCCCTCGTATGAAAGTAATAGTAACTGAGAAGAAACTACCAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTGTGGCTTTTTGAGGACTTGGACATTAGTGTATGGTTGCAGTTGATGAATACTGCAAAACTCATCTaGAATCGAAAGGAACTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FLWLFEDLDISVWLQLMNTAKLI*NRKELG Trigger: GCCAAGTTCCTTTCGATTCAAGATGAGTTTTGCAGT...ATTCATCAACTGCAACCATACACTAATGTCCAAGTCCTCAAAAAGCCACAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| CDS-3UTR CAA 90 bp | GCTGATTTCTATAGTGCAAATATTCAACACCCTGACATGACATTCATGAACATTACGGGAAAGCTTCTTTaGATCTCTTCTGACCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: ADFYSANIQHPDMTFMNITGKLL*ISSDLD Trigger: ATCAAGGTCAGAAGAGATCAAAAGAAGCTTTCCCGT...AATGTTCATGAATGTCATGTCAGGGTGTTGAATATTTGCACTATAGAAATCAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208764.2 |
||
| CDS-3UTR CAA 90 bp | AAGCATCTCTTTATTGGTAGTTTCTTCTCAGTTACTATTACTTTCATACGAGGGACTGCAAAACTCATCTaGAATCGAAAGGAACTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: KHLFIGSFFSVTITFIRGTAKLI*NRKELG Trigger: GCCAAGTTCCTTTCGATTCAAGATGAGTTTTGCAGT...CCCTCGTATGAAAGTAATAGTAACTGAGAAGAAACTACCAATAAAGAGATGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS GCA 72 bp | CGCGTACGCTCCACTGTTGTTTCCCTGCGCCAGGTCTaGCCTGCCCAGGGCCCGGTACGTTTCTGCCACCTC | + |
|
Preference number: 6 (lower is better) Translates to: RVRSTVVSLRQV*PAQGPVRFCHL Trigger: GAGGTGGCAGAAACGTACCGGGCCCTGGGCAGGGCAGACCTGGCGCAGGGAAACAACAGTGGAGCGTACGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 ENSMUST00000208764.2 |
||
| CDS TCA 72 bp | GCTGGGGAGTTGGCAGTCGGTCCCGTGAGAAATGACTaGTGGCGGCGGCGTAGAGTCCTAGGGCTTGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: AGELAVGPVRND*WRRRRVLGLAP Trigger: TGGAGCAAGCCCTAGGACTCTACGCCGCCGCCATCAGTCATTTCTCACGGGACCGACTGCCAACTCCCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032774.16 |
||
| CDS GCA 72 bp | AGCAGCAGCAGCCCGGGCGATGAAGTGTGCAGAGTCTaGAGCCTCCTCCGGGGAGGGATCTTTACTCAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SSSSPGDEVCRV*SLLRGGIFTQD Trigger: ATCCTGAGTAAAGATCCCTCCCCGGAGGAGGCTGCAGACTCTGCACACTTCATCGCCCGGGCTGCTGCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 ENSMUST00000208764.2 |
||
| CDS GCA 72 bp | TTCTTTAGCTTCGCGTACGCTCCACTGTTGTTTCCCTaGGCCAGGTCTGCCCTGCCCAGGGCCCGGTACGTT | + |
|
Preference number: 6 (lower is better) Translates to: FFSFAYAPLLFP*ARSALPRARYV Trigger: AACGTACCGGGCCCTGGGCAGGGCAGACCTGGCGCAGGGAAACAACAGTGGAGCGTACGCGAAGCTAAAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 ENSMUST00000208764.2 |
||
| CDS CCA 72 bp | CCGATTGCCTTGACTTCCCGGCAGCCTCGGAGATCTTaGACAGTGTGTCTATGGTGTGCTGGGTGGCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PIALTSRQPRRS*TVCLWCAGWPG Trigger: CCCTGGCCACCCAGCACACCATAGACACACTGTCCAAGATCTCCGAGGCTGCCGGGAAGTCAAGGCAATCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS CCA 72 bp | GCTACACTGTGCCTGCCCTTCCCTGGCATGCCGTACTaGGGGGCACTGGTGCAGAATGCTACTTTGGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: ATLCLPFPGMPY*GALVQNATLAF Trigger: GAAAGCCAAAGTAGCATTCTGCACCAGTGCCCCCCAGTACGGCATGCCAGGGAAGGGCAGGCACAGTGTAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS CAA 90 bp | GCTCCTGGATGGCCTGTTTGTACTCTCGGCTGCTGGAGTAGGACTTaGCTCTCTCCTCACACAGGTGGAGTTTCTCTCGAGGGGGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: APGWPVCTLGCWSRT*LSPHTGGVSLEGAG Trigger: TCCAGCCCCCTCGAGAGAAACTCCACCTGTGTGAGGAGAGAGCAAAGTCCTACTCCAGCAGCCGAGAGTACAAACAGGCCATCCAGGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS GCA 72 bp | GGCCTGTTTGTACTCTCGGCTGCTGGAGTAGGACTTTaGTCTCTCCTCACACAGGTGGAGTTTCTCTCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GLFVLSAAGVGL*SLLTQVEFLSR Trigger: CCTCGAGAGAAACTCCACCTGTGTGAGGAGAGAGCAAAGTCCTACTCCAGCAGCCGAGAGTACAAACAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS GCA 72 bp | GCACTGGTGCAGAATGCTACTTTGGCTTTCACCGATTaGCTTGACTTCCCGGCAGCCTCGGAGATCTTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ALVQNATLAFTD*LDFPAASEILD Trigger: GTCCAAGATCTCCGAGGCTGCCGGGAAGTCAAGGCAATCGGTGAAAGCCAAAGTAGCATTCTGCACCAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS CAA 72 bp | GCCACCTCAGGACTGAAGTCACCAAATGCTCCTACTTaGGCTTCCAGGGACTCTCTCAGGATCATGGCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: ATSGLKSPNAPT*ASRDSLRIMAA Trigger: AGCGGCCATGATCCTGAGAGAGTCCCTGGAAGCCAAAGTAGGAGCATTTGGTGACTTCAGTCCTGAGGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 ENSMUST00000208764.2 |
||
| CDS TCA 72 bp | GCTGTAGAAGGGTCTCCATGTGACATTAAGGACTGGTaGCAAGAACGGAGAGGGGCAGCAGCACTTGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: AVEGSPCDIKDW*QERRGAAALVS Trigger: GGACACAAGTGCTGCTGCCCCTCTCCGTTCTTGTCACCAGTCCTTAATGTCACATGGAGACCCTTCTACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032774.16 |
||
| CDS GCA 72 bp | CTCCGGGGAGGGATCTTTACTCAGGATGATGAGATGTaGCTCTTCCTCATCCACCTGACTGCTGTAGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LRGGIFTQDDEM*LFLIHLTAVEG Trigger: CCCTTCTACAGCAGTCAGGTGGATGAGGAAGAGGCACATCTCATCATCCTGAGTAAAGATCCCTCCCCGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032774.16 |
||
| CDS CCA 72 bp | TTCTTGTTAGTGCCACACAGCGCACAAGCTCCTGGATaGCCTGTTTGTACTCTCGGCTGCTGGAGTAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: FLLVPHSAQAPG*PVCTLGCWSRT Trigger: AGTCCTACTCCAGCAGCCGAGAGTACAAACAGGCCATCCAGGAGCTTGTGCGCTGTGTGGCACTAACAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS CAA 72 bp | TGGCCTGTTTGTACTCTCGGCTGCTGGAGTAGGACTTaGCTCTCTCCTCACACAGGTGGAGTTTCTCTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: WPVCTLGCWSRT*LSPHTGGVSLE Trigger: CTCGAGAGAAACTCCACCTGTGTGAGGAGAGAGCAAAGTCCTACTCCAGCAGCCGAGAGTACAAACAGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS CAA 72 bp | TGGTGCAGAATGCTACTTTGGCTTTCACCGATTGCCTaGACTTCCCGGCAGCCTCGGAGATCTTGGACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: WCRMLLWLSPIA*TSRQPRRSWTV Trigger: CACTGTCCAAGATCTCCGAGGCTGCCGGGAAGTCAAGGCAATCGGTGAAAGCCAAAGTAGCATTCTGCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS CAA 90 bp | CATACGCCTCCGCTAGTTTCCAGTGCCAGTCGCCATAGCAAATTCTaGTTAGTGCCACACAGCGCACAAGCTCCTGGATGGCCTGTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: HTPPLVSSASRHSKF*LVPHSAQAPGWPVC Trigger: ACAAACAGGCCATCCAGGAGCTTGTGCGCTGTGTGGCACTAACAAGAATTTGCTATGGCGACTGGCACTGGAAACTAGCGGAGGCGTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS CAA 90 bp | CGATGGAGTTGGCCAGGATCTCCTTGGCTTTCTCTGCATGCTGCTTaGCTTGTAGTGACAACCCTTTCAGCTGCAGGTAACCCTGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RWSWPGSPWLSLHAA*LVVTTLSAAGNPEP Trigger: TGGCTCAGGGTTACCTGCAGCTGAAAGGGTTGTCACTACAAGCAAAGCAGCATGCAGAGAAAGCCAAGGAGATCCTGGCCAACTCCATCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS CCA 72 bp | GACAGGGACTCTCGATGGAGTTGGCCAGGATCTCCTTaGCTTTCTCTGCATGCTGCTTTGCTTGTAGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: DRDSRWSWPGSP*LSLHAALLVVT Trigger: TGTCACTACAAGCAAAGCAGCATGCAGAGAAAGCCAAGGAGATCCTGGCCAACTCCATCGAGAGTCCCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS CCA 72 bp | CGGAGATCTTGGACAGTGTGTCTATGGTGTGCTGGGTaGCCAGGGTCTTCTTGTCCTGTGATCCATACAAGA | + |
|
Preference number: 6 (lower is better) Translates to: RRSWTVCLWCAG*PGSSCPVIHTR Trigger: TCTTGTATGGATCACAGGACAAGAAGACCCTGGCCACCCAGCACACCATAGACACACTGTCCAAGATCTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS GCA 72 bp | ATGGAGTTGGCCAGGATCTCCTTGGCTTTCTCTGCATaGTGCTTTGCTTGTAGTGACAACCCTTTCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: MELARISLAFSA*CFACSDNPFSC Trigger: GCAGCTGAAAGGGTTGTCACTACAAGCAAAGCAGCATGCAGAGAAAGCCAAGGAGATCCTGGCCAACTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS GCA 72 bp | GTACGTTTCTGCCACCTCAGGACTGAAGTCACCAAATaGTCCTACTTTGGCTTCCAGGGACTCTCTCAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: VRFCHLRTEVTK*SYFGFQGLSQD Trigger: ATCCTGAGAGAGTCCCTGGAAGCCAAAGTAGGAGCATTTGGTGACTTCAGTCCTGAGGTGGCAGAAACGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 ENSMUST00000208764.2 |
||
| CDS CAA 72 bp | TGGCCAGGATCTCCTTGGCTTTCTCTGCATGCTGCTTaGCTTGTAGTGACAACCCTTTCAGCTGCAGGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: WPGSPWLSLHAA*LVVTTLSAAGN Trigger: GTTACCTGCAGCTGAAAGGGTTGTCACTACAAGCAAAGCAGCATGCAGAGAAAGCCAAGGAGATCCTGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS CAA 72 bp | AGTGTGTCTATGGTGTGCTGGGTGGCCAGGGTCTTCTaGTCCTGTGATCCATACAAGAACGTCTCAATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SVSMVCWVARVF*SCDPYKNVSIW Trigger: CCAGATTGAGACGTTCTTGTATGGATCACAGGACAAGAAGACCCTGGCCACCCAGCACACCATAGACACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS CAA 90 bp | TACGTTTCTGCCACCTCAGGACTGAAGTCACCAAATGCTCCTACTTaGGCTTCCAGGGACTCTCTCAGGATCATGGCCGCTCTTTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: YVSATSGLKSPNAPT*ASRDSLRIMAALSF Trigger: AAAAGAAAGAGCGGCCATGATCCTGAGAGAGTCCCTGGAAGCCAAAGTAGGAGCATTTGGTGACTTCAGTCCTGAGGTGGCAGAAACGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 ENSMUST00000208764.2 |
||
| CDS CAA 90 bp | ATCTTGGACAGTGTGTCTATGGTGTGCTGGGTGGCCAGGGTCTTCTaGTCCTGTGATCCATACAAGAACGTCTCAATCTGGACACACTTC | + |
|
Preference number: 6 (lower is better) Translates to: ILDSVSMVCWVARVF*SCDPYKNVSIWTHF Trigger: GAAGTGTGTCCAGATTGAGACGTTCTTGTATGGATCACAGGACAAGAAGACCCTGGCCACCCAGCACACCATAGACACACTGTCCAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS TCA 72 bp | TGGAGTTTCTCTCGAGGGGGCTGGAACAGTGCTGTCTaGAGCAGCTTATTCGGGATCCTGTTTTTAGAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: WSFSRGGWNSAV*SSLFGILFLEV Trigger: CACTTCTAAAAACAGGATCCCGAATAAGCTGCTTCAGACAGCACTGTTCCAGCCCCCTCGAGAGAAACTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS TCA 72 bp | AGCTCCAGGGAACACTTGAAGATATCTGTTTTGTTGTaGCAGGGACTCTCGATGGAGTTGGCCAGGATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSREHLKISVLL*QGLSMELARIS Trigger: GGAGATCCTGGCCAACTCCATCGAGAGTCCCTGTCACAACAAAACAGATATCTTCAAGTGTTCCCTGGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
||
| CDS TCA 72 bp | GCTCCTTCGGAATCCTTGATAGAAGTCATGCTTTCCTaGAAGTATTTCTCGGCCACATCACGGTGGTCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: APSESLIEVMLS*KYFSATSRWSC Trigger: GCACGACCACCGTGATGTGGCCGAGAAATACTTTCAGGAAAGCATGACTTCTATCAAGGATTCCGAAGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 ENSMUST00000208764.2 |
||
| CDS CCA 72 bp | TATCTGTTTTGTTGTGACAGGGACTCTCGATGGAGTTaGCCAGGATCTCCTTGGCTTTCTCTGCATGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: YLFCCDRDSRWS*PGSPWLSLHAA Trigger: AGCAGCATGCAGAGAAAGCCAAGGAGATCCTGGCCAACTCCATCGAGAGTCCCTGTCACAACAAAACAGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
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| CDS TCA 72 bp | TGTCCGGTGGTTTGCAGAAAACTGCAAAACTCATCTTaGATCGAAAGGAACTTGGCTCTTTCCGCTCCTTCG | + |
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Preference number: 6 (lower is better) Translates to: CPVVCRKLQNSS*IERNLALSAPS Trigger: CGAAGGAGCGGAAAGAGCCAAGTTCCTTTCGATTCAAGATGAGTTTTGCAGTTTTCTGCAAACCACCGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 ENSMUST00000208764.2 |
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| CDS CAA 72 bp | TTGTCCGGTGGTTTGCAGAAAACTGCAAAACTCATCTaGAATCGAAAGGAACTTGGCTCTTTCCGCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LSGGLQKTAKLI*NRKELGSFRSF Trigger: GAAGGAGCGGAAAGAGCCAAGTTCCTTTCGATTCAAGATGAGTTTTGCAGTTTTCTGCAAACCACCGGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 ENSMUST00000208764.2 |
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| CDS TCA 72 bp | CTCCTTGGAAAGTCTCTCTGCTTTTATCAAGTTCTCTaGGGCGTCTTTAAATTTTTGAAGGGAGAGCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: LLGKSLCFYQVL*GVFKFLKGEQR Trigger: GCGCTGCTCTCCCTTCAAAAATTTAAAGACGCCTCAGAGAACTTGATAAAAGCAGAGAGACTTTCCAAGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 |
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| CDS CAA 90 bp | TCGAGACTGGATTTCTATCCACTCTTCCTTTACAATGTTCCCACATaGCAGCATCTCCTTGGAAAGTCTCTCTGCTTTTATCAAGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SRLDFYPLFLYNVPT*QHLLGKSLCFYQVL Trigger: GAGAACTTGATAAAAGCAGAGAGACTTTCCAAGGAGATGCTGCAATGTGGGAACATTGTAAAGGAAGAGTGGATAGAAATCCAGTCTCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 ENSMUST00000208764.2 |
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| CDS CAA 72 bp | GATTTCTATCCACTCTTCCTTTACAATGTTCCCACATaGCAGCATCTCCTTGGAAAGTCTCTCTGCTTTTAT | + |
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Preference number: 6 (lower is better) Translates to: DFYPLFLYNVPT*QHLLGKSLCFY Trigger: ATAAAAGCAGAGAGACTTTCCAAGGAGATGCTGCAATGTGGGAACATTGTAAAGGAAGAGTGGATAGAAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 ENSMUST00000208764.2 |
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| CDS CAA 72 bp | ATTCCAAAGCCTTTTGATAGAACGGGAAAGCTTCTTTaGATCTCTTCTGACCTTGATACAACTGTGCAAACG | + |
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Preference number: 6 (lower is better) Translates to: IPKPFDRTGKLL*ISSDLDTTVQT Trigger: CGTTTGCACAGTTGTATCAAGGTCAGAAGAGATCAAAAGAAGCTTTCCCGTTCTATCAAAAGGCTTTGGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032774.16 ENSMUST00000107470.2 ENSMUST00000107471.8 ENSMUST00000208764.2 |
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