Pregenerated sensors for TTC19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042298Ensembl transcript IDs: ENSMUST00000050646.13, ENSMUST00000101075.11, ENSMUST00000162385.2
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTTACTTCAGAACAGAACAGAACCCCACAGTTTACCTAGAGAGGTaGAGGCCGGCTTACCGACGCGGGCAGCAGCAAGTACTGAGTCTG | + |
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Preference number: 1 (lower is better) Translates to: SYFRTEQNPTVYLER*RPAYRRGQQQVLSL Trigger: CAGACTCAGTACTTGCTGCTGCCCGCGTCGGTAAGCCGGCCTCCACCTCTCTAGGTAAACTGTGGGGTTCTGTTCTGTTCTGAAGTAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050646.13 |
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| 3UTR TCA 90 bp | CCTGGTTATTCATGGTTAGCGGGAAGATCACATGTGGTTAGGAAGTaGATGGTAAATGAACTCAAACAGAATGTGGGGCTCTCCCCACAC | + |
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Preference number: 1 (lower is better) Translates to: PGYSWLAGRSHVVRK*MVNELKQNVGLSPH Trigger: GTGTGGGGAGAGCCCCACATTCTGTTTGAGTTCATTTACCATTCACTTCCTAACCACATGTGATCTTCCCGCTAACCATGAATAACCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050646.13 |
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| 3UTR TCA 90 bp | CAGTGTATGCAACTTGTCCTTCTCCGAAGCCGAGTTGACGAACGTTaGATTTCAACAATGATTTACACACTGATTGAGGTCCAGACAACG | + |
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Preference number: 1 (lower is better) Translates to: QCMQLVLLRSRVDER*ISTMIYTLIEVQTT Trigger: CGTTGTCTGGACCTCAATCAGTGTGTAAATCATTGTTGAAATTCAACGTTCGTCAACTCGGCTTCGGAGAAGGACAAGTTGCATACACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| 3UTR CCA 90 bp | TACACACTGATTGAGGTCCAGACAACGAAGGAACAGTTACTCCTTTaGGATATCAGAGGTTACCCTCTCTACAACAAAATGAACTTCTAT | + |
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Preference number: 1 (lower is better) Translates to: YTLIEVQTTKEQLLL*DIRGYPLYNKMNFY Trigger: ATAGAAGTTCATTTTGTTGTAGAGAGGGTAACCTCTGATATCCCAAAGGAGTAACTGTTCCTTCGTTGTCTGGACCTCAATCAGTGTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| 3UTR-3UTR GCA 90 bp | ACCGCCTACCTCTACCACCAGGGTTCCTTCGTGGCACCCAGAAAAATGTGTTTTAGGCAAAAAGCCATTTaGCAGACTGCAAAGGTAAAA | + |
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Preference number: 2 (lower is better) Translates to: TAYLYHQGSFVAPRKMCFRQKAI*QTAKVK Trigger: TTTTACCTTTGCAGTCTGGCAAATGGCTTTTTGCCT...AAAACACATTTTTCTGGGTGCCACGAAGGAACCCTGGTGGTAGAGGTAGGCGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| 3UTR-3UTR TCA 90 bp | TTCTCCCAGAACAAACACATGAACCAAAGTCCACTGGCAATCGTACTCACACCGCGAGTTGACGAACGTTaGATTTCAACAATGATTTAC | + |
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Preference number: 2 (lower is better) Translates to: FSQNKHMNQSPLAIVLTPRVDER*ISTMIY Trigger: GTAAATCATTGTTGAAATTCAACGTTCGTCAACTCG...CGGTGTGAGTACGATTGCCAGTGGACTTTGGTTCATGTGTTTGTTCTGGGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| 3UTR-3UTR GCA 90 bp | AGATTCTCCCAGAACAAACACATGAACCAAAGTCCACTGGCAATCGTACTCACAAGGCAAAAAGCCATTTaGCAGACTGCAAAGGTAAAA | + |
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Preference number: 2 (lower is better) Translates to: RFSQNKHMNQSPLAIVLTRQKAI*QTAKVK Trigger: TTTTACCTTTGCAGTCTGGCAAATGGCTTTTTGCCT...TGTGAGTACGATTGCCAGTGGACTTTGGTTCATGTGTTTGTTCTGGGAGAATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| 3UTR-3UTR TCA 90 bp | TGTAAGCATAACTTTACTCCACTCTGTGCCTGTGGTTATAAAGGAAGCCCTGTGCGAGTTGACGAACGTTaGATTTCAACAATGATTTAC | + |
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Preference number: 2 (lower is better) Translates to: CKHNFTPLCACGYKGSPVRVDER*ISTMIY Trigger: GTAAATCATTGTTGAAATTCAACGTTCGTCAACTCG...CACAGGGCTTCCTTTATAACCACAGGCACAGAGTGGAGTAAAGTTATGCTTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| 3UTR-3UTR CCA 90 bp | GGACATGAGGTCAGTCACCATGGAACATTAAAAAGCCTAACAGCTAACTTGGGTCTTGTTTGCCAGAAATaGATACAGAAAAGTAAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: GHEVSHHGTLKSLTANLGLVCQK*IQKSKH Trigger: ATGCTTACTTTTCTGTATCCATTTCTGGCAAACAAG...ACCCAAGTTAGCTGTTAGGCTTTTTAATGTTCCATGGTGACTGACCTCATGTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050646.13 |
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| 3UTR CCA 72 bp | AGAACAGAACAGAACCCCACAGTTTACCTAGAGAGGTaGAGGCCGGCTTACCGACGCGGGCAGCAGCAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: RTEQNPTVYLER*RPAYRRGQQQV Trigger: TACTTGCTGCTGCCCGCGTCGGTAAGCCGGCCTCCACCTCTCTAGGTAAACTGTGGGGTTCTGTTCTGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050646.13 |
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| 3UTR GCA 72 bp | CAATCGAGCTTGGTCACCTACTCTTGTAGCTCCTCCTaGAGACTGCTTGTGCTATCTGTGTTCACGACAACA | + |
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Preference number: 3 (lower is better) Translates to: QSSLVTYSCSSS*RLLVLSVFTTT Trigger: TGTTGTCGTGAACACAGATAGCACAAGCAGTCTGCAGGAGGAGCTACAAGAGTAGGTGACCAAGCTCGATTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050646.13 |
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| 3UTR-3UTR CAA 90 bp | AGCTGTTTCACCTTTAAAAACAAAAGTAGGGCCAGGCACTTTCGAAGCCGAGGGGGAACAGTTACTCCTTaGGGATATCAGAGGTTACCC | + |
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Preference number: 3 (lower is better) Translates to: SCFTFKNKSRARHFRSRGGTVTP*GYQRLP Trigger: GGGTAACCTCTGATATCCCAAAGGAGTAACTGTTCC...CCCTCGGCTTCGAAAGTGCCTGGCCCTACTTTTGTTTTTAAAGGTGAAACAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| 3UTR TCA 72 bp | CTAACTAGGATCCAGATCAGAGGCTGCACATTACCCTaGGCACATGGGTGCTGTAAGCATAACTTTACTCCA | + |
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Preference number: 3 (lower is better) Translates to: LTRIQIRGCTLP*AHGCCKHNFTP Trigger: TGGAGTAAAGTTATGCTTACAGCACCCATGTGCTCAGGGTAATGTGCAGCCTCTGATCTGGATCCTAGTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| 3UTR-3UTR CAA 90 bp | TGTAAGCATAACTTTACTCCACTCTGTGCCTGTGGTTATAAAGGAAGCCCTGTGGGAACAGTTACTCCTTaGGGATATCAGAGGTTACCC | + |
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Preference number: 3 (lower is better) Translates to: CKHNFTPLCACGYKGSPVGTVTP*GYQRLP Trigger: GGGTAACCTCTGATATCCCAAAGGAGTAACTGTTCC...CACAGGGCTTCCTTTATAACCACAGGCACAGAGTGGAGTAAAGTTATGCTTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| 3UTR-3UTR CAA 90 bp | AGGCGGGCCAGCACTATATCTGTAACACATGCACATGCAACTAAATCAAGGTCTAGCCTAACAGCTAACTaGGGTAACTCTGGAATTGTG | + |
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Preference number: 3 (lower is better) Translates to: RRASTISVTHAHATKSRSSLTAN*GNSGIV Trigger: CACAATTCCAGAGTTACCCAAGTTAGCTGTTAGGCT...AGACCTTGATTTAGTTGCATGTGCATGTGTTACAGATATAGTGCTGGCCCGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050646.13 |
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| 3UTR-3UTR CAA 90 bp | GAACAAACACATGAACCAAAGTCCACTGGCAATCGTACTCACACCGCCTACCTCCATGATACAAGTAACTaGTTTGCCAGAAATGGATAC | + |
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Preference number: 3 (lower is better) Translates to: EQTHEPKSTGNRTHTAYLHDTSN*FARNGY Trigger: GTATCCATTTCTGGCAAACAAGTTACTTGTATCATG...GAGGTAGGCGGTGTGAGTACGATTGCCAGTGGACTTTGGTTCATGTGTTTGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| 3UTR TCA 72 bp | CAACTTGTCCTTCTCCGAAGCCGAGTTGACGAACGTTaGATTTCAACAATGATTTACACACTGATTGAGGTC | + |
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Preference number: 3 (lower is better) Translates to: QLVLLRSRVDER*ISTMIYTLIEV Trigger: GACCTCAATCAGTGTGTAAATCATTGTTGAAATTCAACGTTCGTCAACTCGGCTTCGGAGAAGGACAAGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| 3UTR TCA 72 bp | GCAGTGTATGCAACTTGTCCTTCTCCGAAGCCGAGTTaGCGAACGTTGAATTTCAACAATGATTTACACACT | + |
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Preference number: 3 (lower is better) Translates to: AVYATCPSPKPS*RTLNFNNDLHT Trigger: AGTGTGTAAATCATTGTTGAAATTCAACGTTCGTCAACTCGGCTTCGGAGAAGGACAAGTTGCATACACTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| 3UTR CCA 72 bp | ATTGAGGTCCAGACAACGAAGGAACAGTTACTCCTTTaGGATATCAGAGGTTACCCTCTCTACAACAAAATG | + |
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Preference number: 3 (lower is better) Translates to: IEVQTTKEQLLL*DIRGYPLYNKM Trigger: CATTTTGTTGTAGAGAGGGTAACCTCTGATATCCCAAAGGAGTAACTGTTCCTTCGTTGTCTGGACCTCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| 3UTR TCA 72 bp | AATCAAAATCTTATGGAAGGTATAATGACCATATGGTaGGGAACTTGGCCAACTGTAGTCTGTAAATTTCTC | + |
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Preference number: 3 (lower is better) Translates to: NQNLMEGIMTIW*GTWPTVVCKFL Trigger: GAGAAATTTACAGACTACAGTTGGCCAAGTTCCTCACCATATGGTCATTATACCTTCCATAAGATTTTGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS-3UTR TCA 90 bp | TGTAGACCAGGCTGGCCTCTAACTAGAAGAGACCCGCCTGTCTTTGCTTCTGGGTGGCAGCCAGATTGCTaGGTACCATGTGCAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: CRPGWPLTRRDPPVFASGWQPDC*VPCAAQ Trigger: CTGAGCTGCACATGGTACTCAGCAATCTGGCTGCCA...CCCAGAAGCAAAGACAGGCGGGTCTCTTCTAGTTAGAGGCCAGCCTGGTCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162385.2 |
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| CDS-3UTR TCA 90 bp | TTCTCCCAGAACAAACACATGAACCAAAGTCCACTGGCAATCGTACTCACACCGGCTTCAGCAGCTGGATaGTCTCGGCCTCCGCCTCGT | + |
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Preference number: 4 (lower is better) Translates to: FSQNKHMNQSPLAIVLTPASAAG*SRPPPR Trigger: ACGAGGCGGAGGCCGAGATCATCCAGCTGCTGAAGC...CGGTGTGAGTACGATTGCCAGTGGACTTTGGTTCATGTGTTTGTTCTGGGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS-3UTR TCA 90 bp | AGCTGTTTCACCTTTAAAAACAAAAGTAGGGCCAGGCACTTTCGAAGCCGAGGGGCTTCAGCAGCTGGATaGTCTCGGCCTCCGCCTCGT | + |
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Preference number: 4 (lower is better) Translates to: SCFTFKNKSRARHFRSRGASAAG*SRPPPR Trigger: ACGAGGCGGAGGCCGAGATCATCCAGCTGCTGAAGC...CCCTCGGCTTCGAAAGTGCCTGGCCCTACTTTTGTTTTTAAAGGTGAAACAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS-3UTR TCA 90 bp | CCACTGGCAATCGTACTCACACCGCCTACCTCTACCACCAGGGTTCCTTCGTGGTCTTCCCTGATGTGCTaGACAGAAACCTCATCTCTT | + |
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Preference number: 4 (lower is better) Translates to: PLAIVLTPPTSTTRVPSWSSLMC*TETSSL Trigger: AAGAGATGAGGTTTCTGTTCAGCACATCAGGGAAGA...CCACGAAGGAACCCTGGTGGTAGAGGTAGGCGGTGTGAGTACGATTGCCAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS-3UTR CCA 90 bp | AGCTGTTTCACCTTTAAAAACAAAAGTAGGGCCAGGCACTTTCGAAGCCGAGGGGCTTGCTTCAGCAGCTaGATGATCTCGGCCTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: SCFTFKNKSRARHFRSRGACFSS*MISASA Trigger: GGCGGAGGCCGAGATCATCCAGCTGCTGAAGCAAGC...CCCTCGGCTTCGAAAGTGCCTGGCCCTACTTTTGTTTTTAAAGGTGAAACAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS-3UTR TCA 90 bp | TGTAGACCAGGCTGGCCTCTAACTAGAAGAGACCCGCCTGTCTTTGCTTCTGGGCTCTCTTGCCAGATCTaGCGCCCTCTGCATATAAAT | + |
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Preference number: 4 (lower is better) Translates to: CRPGWPLTRRDPPVFASGLSCQI*RPLHIN Trigger: ATTTATATGCAGAGGGCGTCAGATCTGGCAAGAGAG...CCCAGAAGCAAAGACAGGCGGGTCTCTTCTAGTTAGAGGCCAGCCTGGTCTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162385.2 |
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| CDS-3UTR TCA 90 bp | TGTAGACCAGGCTGGCCTCTAACTAGAAGAGACCCGCCTGTCTTTGCTTCTGGGATGTGCAGCTCAGGGTaGTTTATCTCTCTTGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: CRPGWPLTRRDPPVFASGMCSSG*FISLAR Trigger: TCTGGCAAGAGAGATAAATCACCCTGAGCTGCACAT...CCCAGAAGCAAAGACAGGCGGGTCTCTTCTAGTTAGAGGCCAGCCTGGTCTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162385.2 |
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| CDS-3UTR GCA 90 bp | TGTAGACCAGGCTGGCCTCTAACTAGAAGAGACCCGCCTGTCTTTGCTTCTGGGTGTCTTCCTGCTTCATaGCTCCTCCAAGCAGATAAC | + |
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Preference number: 4 (lower is better) Translates to: CRPGWPLTRRDPPVFASGCLPAS*LLQADN Trigger: GTTATCTGCTTGGAGGAGGCATGAAGCAGGAAGACA...CCCAGAAGCAAAGACAGGCGGGTCTCTTCTAGTTAGAGGCCAGCCTGGTCTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162385.2 |
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| CDS-3UTR TCA 90 bp | TTCTCCCAGAACAAACACATGAACCAAAGTCCACTGGCAATCGTACTCACACCGTGGCAGCCAGATTGCTaGGTACCATGTGCAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: FSQNKHMNQSPLAIVLTPWQPDC*VPCAAQ Trigger: CTGAGCTGCACATGGTACTCAGCAATCTGGCTGCCA...CGGTGTGAGTACGATTGCCAGTGGACTTTGGTTCATGTGTTTGTTCTGGGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS-3UTR GCA 90 bp | GGCTCTAATCCTTCAGAGGCTGAGGAAGGAAGACATGCAGAACCCAGGAGTTCCATTGCATTGTCTTCCTaGTTCATGCCTCCTCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: GSNPSEAEEGRHAEPRSSIALSS*FMPPPS Trigger: GCTTGGAGGAGGCATGAAGCAGGAAGACAATGCAAT...GGAACTCCTGGGTTCTGCATGTCTTCCTTCCTCAGCCTCTGAAGGATTAGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162385.2 |
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| CDS-3UTR GCA 90 bp | CCACTGGCAATCGTACTCACACCGCCTACCTCTACCACCAGGGTTCCTTCGTGGCCTCTAGAGTTGAAATaGAGAATTCATAGCCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: PLAIVLTPPTSTTRVPSWPLELK*RIHSQQ Trigger: TTGCTGGCTATGAATTCTGCATTTCAACTCTAGAGG...CCACGAAGGAACCCTGGTGGTAGAGGTAGGCGGTGTGAGTACGATTGCCAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS-3UTR CCA 90 bp | TGTAAGCATAACTTTACTCCACTCTGTGCCTGTGGTTATAAAGGAAGCCCTGTGGCTTGCTTCAGCAGCTaGATGATCTCGGCCTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: CKHNFTPLCACGYKGSPVACFSS*MISASA Trigger: GGCGGAGGCCGAGATCATCCAGCTGCTGAAGCAAGC...CACAGGGCTTCCTTTATAACCACAGGCACAGAGTGGAGTAAAGTTATGCTTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS-3UTR CCA 90 bp | GGCTCTAATCCTTCAGAGGCTGAGGAAGGAAGACATGCAGAACCCAGGAGTTCCCACTCATCAGCACAATaGTCTGTGGGTGTCTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: GSNPSEAEEGRHAEPRSSHSSAQ*SVGVFL Trigger: GAGAAAGACACCCACAGACCATTGTGCTGATGAGTG...GGAACTCCTGGGTTCTGCATGTCTTCCTTCCTCAGCCTCTGAAGGATTAGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162385.2 |
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| CDS-3UTR GCA 90 bp | ACCGCCTACCTCTACCACCAGGGTTCCTTCGTGGCACCCAGAAAAATGTGTTTTATGCTCAACTTGGCTTaGTTCAGCAGCTGGATGATC | + |
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Preference number: 4 (lower is better) Translates to: TAYLYHQGSFVAPRKMCFMLNLA*FSSWMI Trigger: GATCATCCAGCTGCTGAAGCAAGCCAAGTTGAGCAT...AAAACACATTTTTCTGGGTGCCACGAAGGAACCCTGGTGGTAGAGGTAGGCGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS-3UTR GCA 90 bp | CCACTGGCAATCGTACTCACACCGCCTACCTCTACCACCAGGGTTCCTTCGTGGTTTAAAAAGCTGTTCTaGCAGGTCATAAGTGTACGT | + |
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Preference number: 4 (lower is better) Translates to: PLAIVLTPPTSTTRVPSWFKKLF*QVISVR Trigger: ACGTACACTTATGACCTGGCAGAACAGCTTTTTAAA...CCACGAAGGAACCCTGGTGGTAGAGGTAGGCGGTGTGAGTACGATTGCCAGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101075.11 |
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| CDS-3UTR CCA 90 bp | TGTAGACCAGGCTGGCCTCTAACTAGAAGAGACCCGCCTGTCTTTGCTTCTGGGGAGCAGCATAGATGTTaGCCAGTTTCAGAGAGATTT | + |
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Preference number: 4 (lower is better) Translates to: CRPGWPLTRRDPPVFASGEQHRC*PVSERF Trigger: AAATCTCTCTGAAACTGGCCAACATCTATGCTGCTC...CCCAGAAGCAAAGACAGGCGGGTCTCTTCTAGTTAGAGGCCAGCCTGGTCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162385.2 |
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| CDS-3UTR CCA 90 bp | GGCTCTAATCCTTCAGAGGCTGAGGAAGGAAGACATGCAGAACCCAGGAGTTCCCAGCACAATGGTCTGTaGGTGTCTTTCTCCTTGTAT | + |
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Preference number: 4 (lower is better) Translates to: GSNPSEAEEGRHAEPRSSQHNGL*VSFSLY Trigger: ATACAAGGAGAAAGACACCCACAGACCATTGTGCTG...GGAACTCCTGGGTTCTGCATGTCTTCCTTCCTCAGCCTCTGAAGGATTAGAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162385.2 |
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| CDS-3UTR TCA 90 bp | TTCTCCCAGAACAAACACATGAACCAAAGTCCACTGGCAATCGTACTCACACCGGGTCATAAGTGTACGTaGTGGCCTTCCTGTTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: FSQNKHMNQSPLAIVLTPGHKCT*WPSCCH Trigger: GTGACAACAGGAAGGCCATCACGTACACTTATGACC...CGGTGTGAGTACGATTGCCAGTGGACTTTGGTTCATGTGTTTGTTCTGGGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS-3UTR GCA 90 bp | ACCGCCTACCTCTACCACCAGGGTTCCTTCGTGGCACCCAGAAAAATGTGTTTTCTGGTAGATCTCCTTTaGTTGTGTGTATCGCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: TAYLYHQGSFVAPRKMCFLVDLL*LCVSLS Trigger: AGAGAGCGATACACACAAGCAAAGGAGATCTACCAG...AAAACACATTTTTCTGGGTGCCACGAAGGAACCCTGGTGGTAGAGGTAGGCGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS-3UTR TCA 90 bp | AACAAACACATGAACCAAAGTCCACTGGCAATCGTACTCACACCGCCTACCTCTCTCTCTTGCCAGATCTaGCGCCCTCTGCATATAAAT | + |
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Preference number: 4 (lower is better) Translates to: NKHMNQSPLAIVLTPPTSLSCQI*RPLHIN Trigger: ATTTATATGCAGAGGGCGTCAGATCTGGCAAGAGAG...AGAGGTAGGCGGTGTGAGTACGATTGCCAGTGGACTTTGGTTCATGTGTTTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS-3UTR TCA 90 bp | AACAAACACATGAACCAAAGTCCACTGGCAATCGTACTCACACCGCCTACCTCTATGTGCAGCTCAGGGTaGTTTATCTCTCTTGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: NKHMNQSPLAIVLTPPTSMCSSG*FISLAR Trigger: TCTGGCAAGAGAGATAAATCACCCTGAGCTGCACAT...AGAGGTAGGCGGTGTGAGTACGATTGCCAGTGGACTTTGGTTCATGTGTTTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS-3UTR TCA 90 bp | AACAAACACATGAACCAAAGTCCACTGGCAATCGTACTCACACCGCCTACCTCTCAGCCAATTCTTCCCTaGTGTGCTGAACAGAAACCT | + |
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Preference number: 4 (lower is better) Translates to: NKHMNQSPLAIVLTPPTSQPILP*CAEQKP Trigger: AGGTTTCTGTTCAGCACATCAGGGAAGAATTGGCTG...AGAGGTAGGCGGTGTGAGTACGATTGCCAGTGGACTTTGGTTCATGTGTTTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS-3UTR GCA 90 bp | AACAAACACATGAACCAAAGTCCACTGGCAATCGTACTCACACCGCCTACCTCTATGCTCAACTTGGCTTaGTTCAGCAGCTGGATGATC | + |
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Preference number: 4 (lower is better) Translates to: NKHMNQSPLAIVLTPPTSMLNLA*FSSWMI Trigger: GATCATCCAGCTGCTGAAGCAAGCCAAGTTGAGCAT...AGAGGTAGGCGGTGTGAGTACGATTGCCAGTGGACTTTGGTTCATGTGTTTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS-3UTR GCA 90 bp | GGCTCTAATCCTTCAGAGGCTGAGGAAGGAAGACATGCAGAACCCAGGAGTTCCTTTAAAAAGCTGTTCTaGATTTTCAAGCTGCCCTCG | + |
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Preference number: 4 (lower is better) Translates to: GSNPSEAEEGRHAEPRSSFKKLF*IFKLPS Trigger: CGAGGGCAGCTTGAAAATGCAGAACAGCTTTTTAAA...GGAACTCCTGGGTTCTGCATGTCTTCCTTCCTCAGCCTCTGAAGGATTAGAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162385.2 |
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| CDS-3UTR GCA 90 bp | TCACCTTTAAAAACAAAAGTAGGGCCAGGCACTTTCGAAGCCGAGGGAGGAGTAATTGCATTGTCTTCCTaGTTCATGCCTCCTCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPLKTKVGPGTFEAEGGVIALSS*FMPPPS Trigger: GCTTGGAGGAGGCATGAAGCAGGAAGACAATGCAAT...TACTCCTCCCTCGGCTTCGAAAGTGCCTGGCCCTACTTTTGTTTTTAAAGGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS-3UTR GCA 90 bp | TTCTCCCAGAACAAACACATGAACCAAAGTCCACTGGCAATCGTACTCACACCGATTGCATTGTCTTCCTaGTTCATGCCTCCTCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSQNKHMNQSPLAIVLTPIALSS*FMPPPS Trigger: GCTTGGAGGAGGCATGAAGCAGGAAGACAATGCAAT...CGGTGTGAGTACGATTGCCAGTGGACTTTGGTTCATGTGTTTGTTCTGGGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS-3UTR GCA 90 bp | GGCTCTAATCCTTCAGAGGCTGAGGAAGGAAGACATGCAGAACCCAGGAGTTCCCCTCTAGAGTTGAAATaGAGAATTCATAGCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GSNPSEAEEGRHAEPRSSPLELK*RIHSQQ Trigger: TTGCTGGCTATGAATTCTGCATTTCAACTCTAGAGG...GGAACTCCTGGGTTCTGCATGTCTTCCTTCCTCAGCCTCTGAAGGATTAGAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162385.2 |
||
| CDS-3UTR CCA 90 bp | ACCGCCTACCTCTACCACCAGGGTTCCTTCGTGGCACCCAGAAAAATGTGTTTTGAGCAGCATAGATGTTaGCCAGTTTCAGAGAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: TAYLYHQGSFVAPRKMCFEQHRC*PVSERF Trigger: AAATCTCTCTGAAACTGGCCAACATCTATGCTGCTC...AAAACACATTTTTCTGGGTGCCACGAAGGAACCCTGGTGGTAGAGGTAGGCGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS-3UTR CCA 90 bp | AACAAACACATGAACCAAAGTCCACTGGCAATCGTACTCACACCGCCTACCTCTCAGCACAATGGTCTGTaGGTGTCTTTCTCCTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: NKHMNQSPLAIVLTPPTSQHNGL*VSFSLY Trigger: ATACAAGGAGAAAGACACCCACAGACCATTGTGCTG...AGAGGTAGGCGGTGTGAGTACGATTGCCAGTGGACTTTGGTTCATGTGTTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS-3UTR TCA 90 bp | TCAAAATCTTATGGAAGGTATAATGACCATATGGTGAGGAACTTGGCCAACTGTTGGCAGCCAGATTGCTaGGTACCATGTGCAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SKSYGRYNDHMVRNLANCWQPDC*VPCAAQ Trigger: CTGAGCTGCACATGGTACTCAGCAATCTGGCTGCCA...ACAGTTGGCCAAGTTCCTCACCATATGGTCATTATACCTTCCATAAGATTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS-3UTR CCA 90 bp | TCACCTTTAAAAACAAAAGTAGGGCCAGGCACTTTCGAAGCCGAGGGAGGAGTAGAGCAGCATAGATGTTaGCCAGTTTCAGAGAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: SPLKTKVGPGTFEAEGGVEQHRC*PVSERF Trigger: AAATCTCTCTGAAACTGGCCAACATCTATGCTGCTC...TACTCCTCCCTCGGCTTCGAAAGTGCCTGGCCCTACTTTTGTTTTTAAAGGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS-3UTR CCA 90 bp | AGATTCTCCCAGAACAAACACATGAACCAAAGTCCACTGGCAATCGTACTCACACACTCATCAGCACAATaGTCTGTGGGTGTCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RFSQNKHMNQSPLAIVLTHSSAQ*SVGVFL Trigger: GAGAAAGACACCCACAGACCATTGTGCTGATGAGTG...TGTGAGTACGATTGCCAGTGGACTTTGGTTCATGTGTTTGTTCTGGGAGAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS-3UTR TCA 90 bp | TCTTATGGAAGGTATAATGACCATATGGTGAGGAACTTGGCCAACTGTAGTCTGATGTGCAGCTCAGGGTaGTTTATCTCTCTTGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SYGRYNDHMVRNLANCSLMCSSG*FISLAR Trigger: TCTGGCAAGAGAGATAAATCACCCTGAGCTGCACAT...CAGACTACAGTTGGCCAAGTTCCTCACCATATGGTCATTATACCTTCCATAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS-3UTR GCA 90 bp | TTCTCCCAGAACAAACACATGAACCAAAGTCCACTGGCAATCGTACTCACACCGCCTCTAGAGTTGAAATaGAGAATTCATAGCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FSQNKHMNQSPLAIVLTPPLELK*RIHSQQ Trigger: TTGCTGGCTATGAATTCTGCATTTCAACTCTAGAGG...CGGTGTGAGTACGATTGCCAGTGGACTTTGGTTCATGTGTTTGTTCTGGGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS-3UTR CCA 90 bp | TCTTATGGAAGGTATAATGACCATATGGTGAGGAACTTGGCCAACTGTAGTCTGCACTCATCAGCACAATaGTCTGTGGGTGTCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SYGRYNDHMVRNLANCSLHSSAQ*SVGVFL Trigger: GAGAAAGACACCCACAGACCATTGTGCTGATGAGTG...CAGACTACAGTTGGCCAAGTTCCTCACCATATGGTCATTATACCTTCCATAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS-3UTR TCA 90 bp | GTAAGAGAGCTAACTAAAATCCTCCTGTGTCATGATACAAGTAACTTGTTTGCCGGTCATAAGTGTACGTaGTGGCCTTCCTGTTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VRELTKILLCHDTSNLFAGHKCT*WPSCCH Trigger: GTGACAACAGGAAGGCCATCACGTACACTTATGACC...GGCAAACAAGTTACTTGTATCATGACACAGGAGGATTTTAGTTAGCTCTCTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS-3UTR TCA 90 bp | GGACATGAGGTCAGTCACCATGGAACATTAAAAAGCCTAACAGCTAACTTGGGTTCTCCTTGTATTTCTTaGCAAATCTGCAGGGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GHEVSHHGTLKSLTANLGSPCIS*QICRAF Trigger: AAAAGCCCTGCAGATTTGTCAAGAAATACAAGGAGA...ACCCAAGTTAGCTGTTAGGCTTTTTAATGTTCCATGGTGACTGACCTCATGTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050646.13 |
||
| CDS-3UTR TCA 90 bp | GTAAGAGAGCTAACTAAAATCCTCCTGTGTCATGATACAAGTAACTTGTTTGCCCAGCCAATTCTTCCCTaGTGTGCTGAACAGAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: VRELTKILLCHDTSNLFAQPILP*CAEQKP Trigger: AGGTTTCTGTTCAGCACATCAGGGAAGAATTGGCTG...GGCAAACAAGTTACTTGTATCATGACACAGGAGGATTTTAGTTAGCTCTCTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS-3UTR GCA 90 bp | AGATTCTCCCAGAACAAACACATGAACCAAAGTCCACTGGCAATCGTACTCACATTTAAAAAGCTGTTCTaGATTTTCAAGCTGCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RFSQNKHMNQSPLAIVLTFKKLF*IFKLPS Trigger: CGAGGGCAGCTTGAAAATGCAGAACAGCTTTTTAAA...TGTGAGTACGATTGCCAGTGGACTTTGGTTCATGTGTTTGTTCTGGGAGAATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050646.13 |
||
| CDS-3UTR GCA 90 bp | GTTACTCCTTTGGGATATCAGAGGTTACCCTCTCTACAACAAAATGAACTTCTATGTCTTCCTGCTTCATaGCTCCTCCAAGCAGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: VTPLGYQRLPSLQQNELLCLPAS*LLQADN Trigger: GTTATCTGCTTGGAGGAGGCATGAAGCAGGAAGACA...TAGAAGTTCATTTTGTTGTAGAGAGGGTAACCTCTGATATCCCAAAGGAGTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS-3UTR GCA 90 bp | TCAAAATCTTATGGAAGGTATAATGACCATATGGTGAGGAACTTGGCCAACTGTTGTCTTCCTGCTTCATaGCTCCTCCAAGCAGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: SKSYGRYNDHMVRNLANCCLPAS*LLQADN Trigger: GTTATCTGCTTGGAGGAGGCATGAAGCAGGAAGACA...ACAGTTGGCCAAGTTCCTCACCATATGGTCATTATACCTTCCATAAGATTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS-3UTR CCA 90 bp | AAGGAACAGTTACTCCTTTGGGATATCAGAGGTTACCCTCTCTACAACAAAATGCAGCACAATGGTCTGTaGGTGTCTTTCTCCTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KEQLLLWDIRGYPLYNKMQHNGL*VSFSLY Trigger: ATACAAGGAGAAAGACACCCACAGACCATTGTGCTG...CATTTTGTTGTAGAGAGGGTAACCTCTGATATCCCAAAGGAGTAACTGTTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS-3UTR TCA 90 bp | GTTACTCCTTTGGGATATCAGAGGTTACCCTCTCTACAACAAAATGAACTTCTATCTTCCCTGATGTGCTaGACAGAAACCTCATCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VTPLGYQRLPSLQQNELLSSLMC*TETSSL Trigger: AAGAGATGAGGTTTCTGTTCAGCACATCAGGGAAGA...TAGAAGTTCATTTTGTTGTAGAGAGGGTAACCTCTGATATCCCAAAGGAGTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS-3UTR TCA 90 bp | GGCTTCATTCCTTCTGCCACCATCATTTTTAGTAGTTATATACATACAAACAGACTCTCTTGCCAGATCTaGCGCCCTCTGCATATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GFIPSATIIFSSYIHTNRLSCQI*RPLHIN Trigger: ATTTATATGCAGAGGGCGTCAGATCTGGCAAGAGAG...TCTGTTTGTATGTATATAACTACTAAAAATGATGGTGGCAGAAGGAATGAAGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| 3UTR CAA 72 bp | AATAAATTTAGAAACAAAAGTGGCAGTGTATGCAACTaGTCCTTCTCCGAAGCCGAGTTGACGAACGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: NKFRNKSGSVCN*SFSEAELTNVE Trigger: TTCAACGTTCGTCAACTCGGCTTCGGAGAAGGACAAGTTGCATACACTGCCACTTTTGTTTCTAAATTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS-3UTR GCA 90 bp | GTAAGAGAGCTAACTAAAATCCTCCTGTGTCATGATACAAGTAACTTGTTTGCCCAGATAACTCATCGTTaGTTTAAAAAGCTGTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VRELTKILLCHDTSNLFAQITHR*FKKLFC Trigger: GCAGAACAGCTTTTTAAAGCAACGATGAGTTATCTG...GGCAAACAAGTTACTTGTATCATGACACAGGAGGATTTTAGTTAGCTCTCTTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS GCA 90 bp | CGGCTGCTCGGCCGTCGCCGCGGGTCGCGAGAACCAGGCGAGAGCTaGCAACAGCGGCAGCACCCCGTGCCCCCGCGCCGGCGCGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RLLGRRRGSREPGES*QQRQHPVPPRRRAS Trigger: CGAGGCGCGCCGGCGCGGGGGCACGGGGTGCTGCCGCTGTTGGCAGCTCTCGCCTGGTTCTCGCGACCCGCGGCGACGGCCGAGCAGCCG 80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS TCA 90 bp | CTTGGCTTGCTTCAGCAGCTGGATGATCTCGGCCTCCGCCTCGTCTaGCGCGTCCTCTCCCGGCTGCTCGGCCGTCGCCGCGGGTCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: LGLLQQLDDLGLRLV*RVLSRLLGRRRGSR Trigger: TCGCGACCCGCGGCGACGGCCGAGCAGCCGGGAGAGGACGCGTCAGACGAGGCGGAGGCCGAGATCATCCAGCTGCTGAAGCAAGCCAAG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS GCA 90 bp | AGCTCGGCCGCTTCTGGCTCGTCTTTCATGATGCTCAACTTGGCTTaGTTCAGCAGCTGGATGATCTCGGCCTCCGCCTCGTCTGACGCG | + |
|
Preference number: 5 (lower is better) Translates to: SSAASGSSFMMLNLA*FSSWMISASASSDA Trigger: CGCGTCAGACGAGGCGGAGGCCGAGATCATCCAGCTGCTGAAGCAAGCCAAGTTGAGCATCATGAAAGACGAGCCAGAAGCGGCCGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS CCA 90 bp | TCTGGCTCGTCTTTCATGATGCTCAACTTGGCTTGCTTCAGCAGCTaGATGATCTCGGCCTCCGCCTCGTCTGACGCGTCCTCTCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SGSSFMMLNLACFSS*MISASASSDASSPG Trigger: GCCGGGAGAGGACGCGTCAGACGAGGCGGAGGCCGAGATCATCCAGCTGCTGAAGCAAGCCAAGTTGAGCATCATGAAAGACGAGCCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS GCA 90 bp | ATGGCCTTCCTGTTGTCACTCTCATACGCAAGGCGAAGAGCGTCATaGAAAATCAGCTCGGCCGCTTCTGGCTCGTCTTTCATGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: MAFLLSLSYARRRAS*KISSAASGSSFMML Trigger: GAGCATCATGAAAGACGAGCCAGAAGCGGCCGAGCTGATTTTGCATGACGCTCTTCGCCTTGCGTATGAGAGTGACAACAGGAAGGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS CCA 90 bp | ATACGCAAGGCGAAGAGCGTCATGCAAAATCAGCTCGGCCGCTTCTaGCTCGTCTTTCATGATGCTCAACTTGGCTTGCTTCAGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IRKAKSVMQNQLGRF*LVFHDAQLGLLQQL Trigger: CAGCTGCTGAAGCAAGCCAAGTTGAGCATCATGAAAGACGAGCCAGAAGCGGCCGAGCTGATTTTGCATGACGCTCTTCGCCTTGCGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS-3UTR CAA 90 bp | TGTAGACCAGGCTGGCCTCTAACTAGAAGAGACCCGCCTGTCTTTGCTTCTGGGGGTGATTTATCTCTCTaGCCAGATCTGACGCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CRPGWPLTRRDPPVFASGGDLSL*PDLTPS Trigger: AGAGGGCGTCAGATCTGGCAAGAGAGATAAATCACC...CCCAGAAGCAAAGACAGGCGGGTCTCTTCTAGTTAGAGGCCAGCCTGGTCTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162385.2 |
||
| CDS-3UTR CAA 90 bp | TGTAGACCAGGCTGGCCTCTAACTAGAAGAGACCCGCCTGTCTTTGCTTCTGGGAAAATGGCAGCCAGATaGCTGAGTACCATGTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CRPGWPLTRRDPPVFASGKMAAR*LSTMCS Trigger: GCTGCACATGGTACTCAGCAATCTGGCTGCCATTTT...CCCAGAAGCAAAGACAGGCGGGTCTCTTCTAGTTAGAGGCCAGCCTGGTCTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162385.2 |
||
| CDS-3UTR CAA 90 bp | CCACTGGCAATCGTACTCACACCGCCTACCTCTACCACCAGGGTTCCTTCGTGGTTCTCCTTGTATTTCTaGACAAATCTGCAGGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PLAIVLTPPTSTTRVPSWFSLYF*TNLQGF Trigger: AAAGCCCTGCAGATTTGTCAAGAAATACAAGGAGAA...CCACGAAGGAACCCTGGTGGTAGAGGTAGGCGGTGTGAGTACGATTGCCAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS-3UTR CAA 90 bp | CCACTGGCAATCGTACTCACACCGCCTACCTCTACCACCAGGGTTCCTTCGTGGGAGAGATTTCAATTATaGCATTGTCTTCCTGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PLAIVLTPPTSTTRVPSWERFQL*HCLPAS Trigger: TGAAGCAGGAAGACAATGCAATAATTGAAATCTCTC...CCACGAAGGAACCCTGGTGGTAGAGGTAGGCGGTGTGAGTACGATTGCCAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS TCA 90 bp | GAGTACCATGTGCAGCTCAGGGTGATTTATCTCTCTTGCCAGATCTaGCGCCCTCTGCATATAAATGTAGGCATCATCAAAGTGGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: EYHVQLRVIYLSCQI*RPLHINVGIIKVAL Trigger: CAGGGCCACTTTGATGATGCCTACATTTATATGCAGAGGGCGTCAGATCTGGCAAGAGAGATAAATCACCCTGAGCTGCACATGGTACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 ENSMUST00000162385.2 |
||
| CDS-3UTR CAA 90 bp | TTCTCCCAGAACAAACACATGAACCAAAGTCCACTGGCAATCGTACTCACACCGTTCATGATGCTCAACTaGGCTTGCTTCAGCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FSQNKHMNQSPLAIVLTPFMMLN*ACFSSW Trigger: CCAGCTGCTGAAGCAAGCCAAGTTGAGCATCATGAA...CGGTGTGAGTACGATTGCCAGTGGACTTTGGTTCATGTGTTTGTTCTGGGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS-3UTR CAA 90 bp | AACAAACACATGAACCAAAGTCCACTGGCAATCGTACTCACACCGCCTACCTCTTTCATGATGCTCAACTaGGCTTGCTTCAGCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NKHMNQSPLAIVLTPPTSFMMLN*ACFSSW Trigger: CCAGCTGCTGAAGCAAGCCAAGTTGAGCATCATGAA...AGAGGTAGGCGGTGTGAGTACGATTGCCAGTGGACTTTGGTTCATGTGTTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS-3UTR CAA 90 bp | TGTAGACCAGGCTGGCCTCTAACTAGAAGAGACCCGCCTGTCTTTGCTTCTGGGTTTTCCCCTCTAGAGTaGAAATGCAGAATTCATAGC | + |
|
Preference number: 5 (lower is better) Translates to: CRPGWPLTRRDPPVFASGFSPLE*KCRIHS Trigger: GCTATGAATTCTGCATTTCAACTCTAGAGGGGAAAA...CCCAGAAGCAAAGACAGGCGGGTCTCTTCTAGTTAGAGGCCAGCCTGGTCTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162385.2 |
||
| CDS-3UTR CAA 90 bp | AGCTGTTTCACCTTTAAAAACAAAAGTAGGGCCAGGCACTTTCGAAGCCGAGGGGGTGATTTATCTCTCTaGCCAGATCTGACGCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SCFTFKNKSRARHFRSRGGDLSL*PDLTPS Trigger: AGAGGGCGTCAGATCTGGCAAGAGAGATAAATCACC...CCCTCGGCTTCGAAAGTGCCTGGCCCTACTTTTGTTTTTAAAGGTGAAACAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS-3UTR CAA 90 bp | AACAAACACATGAACCAAAGTCCACTGGCAATCGTACTCACACCGCCTACCTCTAAAATGGCAGCCAGATaGCTGAGTACCATGTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NKHMNQSPLAIVLTPPTSKMAAR*LSTMCS Trigger: GCTGCACATGGTACTCAGCAATCTGGCTGCCATTTT...AGAGGTAGGCGGTGTGAGTACGATTGCCAGTGGACTTTGGTTCATGTGTTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS GCA 90 bp | TTCTTCCCTGATGTGCTGAACAGAAACCTCATCTCTTTTCAGCTCTaGTCGCTTCAGCGCTTCCTGGTAGATCTCCTTTGCTTGTGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: FFPDVLNRNLISFQL*SLQRFLVDLLCLCV Trigger: TACACACAAGCAAAGGAGATCTACCAGGAAGCGCTGAAGCGAGCAGAGCTGAAAAGAGATGAGGTTTCTGTTCAGCACATCAGGGAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS-3UTR CAA 90 bp | TGTAGACCAGGCTGGCCTCTAACTAGAAGAGACCCGCCTGTCTTTGCTTCTGGGGAGAGATTTCAATTATaGCATTGTCTTCCTGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: CRPGWPLTRRDPPVFASGERFQL*HCLPAS Trigger: TGAAGCAGGAAGACAATGCAATAATTGAAATCTCTC...CCCAGAAGCAAAGACAGGCGGGTCTCTTCTAGTTAGAGGCCAGCCTGGTCTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162385.2 |
||
| CDS-3UTR CAA 90 bp | GGCTCTAATCCTTCAGAGGCTGAGGAAGGAAGACATGCAGAACCCAGGAGTTCCTTCTCCTTGTATTTCTaGACAAATCTGCAGGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GSNPSEAEEGRHAEPRSSFSLYF*TNLQGF Trigger: AAAGCCCTGCAGATTTGTCAAGAAATACAAGGAGAA...GGAACTCCTGGGTTCTGCATGTCTTCCTTCCTCAGCCTCTGAAGGATTAGAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162385.2 |
||
| CDS-3UTR CAA 90 bp | GGCTCTAATCCTTCAGAGGCTGAGGAAGGAAGACATGCAGAACCCAGGAGTTCCTGGGTGTCTTTCTCCTaGTATTTCTTGACAAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: GSNPSEAEEGRHAEPRSSWVSFS*YFLTNL Trigger: CAGATTTGTCAAGAAATACAAGGAGAAAGACACCCA...GGAACTCCTGGGTTCTGCATGTCTTCCTTCCTCAGCCTCTGAAGGATTAGAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162385.2 |
||
| CDS-3UTR CAA 90 bp | GGCTCTAATCCTTCAGAGGCTGAGGAAGGAAGACATGCAGAACCCAGGAGTTCCATTTCAATTATTGCATaGTCTTCCTGCTTCATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GSNPSEAEEGRHAEPRSSISIIA*SSCFMP Trigger: AGGCATGAAGCAGGAAGACAATGCAATAATTGAAAT...GGAACTCCTGGGTTCTGCATGTCTTCCTTCCTCAGCCTCTGAAGGATTAGAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162385.2 |
||
| CDS-3UTR CAA 90 bp | TGTAAGCATAACTTTACTCCACTCTGTGCCTGTGGTTATAAAGGAAGCCCTGTGGGTGATTTATCTCTCTaGCCAGATCTGACGCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CKHNFTPLCACGYKGSPVGDLSL*PDLTPS Trigger: AGAGGGCGTCAGATCTGGCAAGAGAGATAAATCACC...CACAGGGCTTCCTTTATAACCACAGGCACAGAGTGGAGTAAAGTTATGCTTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
||
| CDS GCA 90 bp | ATTGTCTTCCTGCTTCATGCCTCCTCCAAGCAGATAACTCATCGTTaGTTTAAAAAGCTGTTCTGCCAGGTCATAAGTGTACGTGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: IVFLLHASSKQITHR*FKKLFCQVISVRDG Trigger: GCCATCACGTACACTTATGACCTGGCAGAACAGCTTTTTAAAGCAACGATGAGTTATCTGCTTGGAGGAGGCATGAAGCAGGAAGACAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101075.11 |
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| CDS CCA 90 bp | TCTGCAGGGCTTTTTCATACATCCTTTGTGCCTGTGATAGCTGCTTaGAGAATAGCAGATAGCGTGCACAAGAGTCTAAGCACATACCAA | + |
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Preference number: 5 (lower is better) Translates to: SAGLFHTSFVPVIAA*RIADSVHKSLSTYQ Trigger: TTGGTATGTGCTTAGACTCTTGTGCACGCTATCTGCTATTCTCCAAGCAGCTATCACAGGCACAAAGGATGTATGAAAAAGCCCTGCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 ENSMUST00000162385.2 |
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| CDS-3UTR CAA 90 bp | GAACAAACACATGAACCAAAGTCCACTGGCAATCGTACTCACACCGCCTACCTCTTTTCCCCTCTAGAGTaGAAATGCAGAATTCATAGC | + |
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Preference number: 5 (lower is better) Translates to: EQTHEPKSTGNRTHTAYLFSPLE*KCRIHS Trigger: GCTATGAATTCTGCATTTCAACTCTAGAGGGGAAAA...GAGGTAGGCGGTGTGAGTACGATTGCCAGTGGACTTTGGTTCATGTGTTTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS-3UTR CAA 90 bp | TTCTCCCAGAACAAACACATGAACCAAAGTCCACTGGCAATCGTACTCACACCGTGGGTGTCTTTCTCCTaGTATTTCTTGACAAATCTG | + |
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Preference number: 5 (lower is better) Translates to: FSQNKHMNQSPLAIVLTPWVSFS*YFLTNL Trigger: CAGATTTGTCAAGAAATACAAGGAGAAAGACACCCA...CGGTGTGAGTACGATTGCCAGTGGACTTTGGTTCATGTGTTTGTTCTGGGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS-3UTR CAA 90 bp | AAGGAACAGTTACTCCTTTGGGATATCAGAGGTTACCCTCTCTACAACAAAATGCCTGGTAGATCTCCTTaGCTTGTGTGTATCGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: KEQLLLWDIRGYPLYNKMPGRSP*LVCIAL Trigger: GAGAGCGATACACACAAGCAAAGGAGATCTACCAGG...CATTTTGTTGTAGAGAGGGTAACCTCTGATATCCCAAAGGAGTAACTGTTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS-3UTR CAA 90 bp | AGGCGGGCCAGCACTATATCTGTAACACATGCACATGCAACTAAATCAAGGTCTTGGGTGTCTTTCTCCTaGTATTTCTTGACAAATCTG | + |
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Preference number: 5 (lower is better) Translates to: RRASTISVTHAHATKSRSWVSFS*YFLTNL Trigger: CAGATTTGTCAAGAAATACAAGGAGAAAGACACCCA...AGACCTTGATTTAGTTGCATGTGCATGTGTTACAGATATAGTGCTGGCCCGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050646.13 |
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| CDS-3UTR CAA 90 bp | TCAAAATCTTATGGAAGGTATAATGACCATATGGTGAGGAACTTGGCCAACTGTAAAATGGCAGCCAGATaGCTGAGTACCATGTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: SKSYGRYNDHMVRNLANCKMAAR*LSTMCS Trigger: GCTGCACATGGTACTCAGCAATCTGGCTGCCATTTT...ACAGTTGGCCAAGTTCCTCACCATATGGTCATTATACCTTCCATAAGATTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS GCA 90 bp | ATTGTCTTCCTGCTTCATGCCTCCTCCAAGCAGATAACTCATCGTTaGTTTAAAAAGCTGTTCTGCATTTTCAAGCTGCCCTCGTATAAA | + |
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Preference number: 5 (lower is better) Translates to: IVFLLHASSKQITHR*FKKLFCIFKLPSYK Trigger: TTTATACGAGGGCAGCTTGAAAATGCAGAACAGCTTTTTAAAGCAACGATGAGTTATCTGCTTGGAGGAGGCATGAAGCAGGAAGACAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000162385.2 |
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| CDS-3UTR CAA 90 bp | TGTAAGCATAACTTTACTCCACTCTGTGCCTGTGGTTATAAAGGAAGCCCTGTGTTCTCCTTGTATTTCTaGACAAATCTGCAGGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: CKHNFTPLCACGYKGSPVFSLYF*TNLQGF Trigger: AAAGCCCTGCAGATTTGTCAAGAAATACAAGGAGAA...CACAGGGCTTCCTTTATAACCACAGGCACAGAGTGGAGTAAAGTTATGCTTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS-3UTR CAA 90 bp | TGTAAGCATAACTTTACTCCACTCTGTGCCTGTGGTTATAAAGGAAGCCCTGTGATTTCAATTATTGCATaGTCTTCCTGCTTCATGCCT | + |
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Preference number: 5 (lower is better) Translates to: CKHNFTPLCACGYKGSPVISIIA*SSCFMP Trigger: AGGCATGAAGCAGGAAGACAATGCAATAATTGAAAT...CACAGGGCTTCCTTTATAACCACAGGCACAGAGTGGAGTAAAGTTATGCTTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS-3UTR CAA 90 bp | GGCTTCATTCCTTCTGCCACCATCATTTTTAGTAGTTATATACATACAAACAGACCTGGTAGATCTCCTTaGCTTGTGTGTATCGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: GFIPSATIIFSSYIHTNRPGRSP*LVCIAL Trigger: GAGAGCGATACACACAAGCAAAGGAGATCTACCAGG...TCTGTTTGTATGTATATAACTACTAAAAATGATGGTGGCAGAAGGAATGAAGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS-3UTR CAA 90 bp | TCTTATGGAAGGTATAATGACCATATGGTGAGGAACTTGGCCAACTGTAGTCTGATTTCAATTATTGCATaGTCTTCCTGCTTCATGCCT | + |
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Preference number: 5 (lower is better) Translates to: SYGRYNDHMVRNLANCSLISIIA*SSCFMP Trigger: AGGCATGAAGCAGGAAGACAATGCAATAATTGAAAT...CAGACTACAGTTGGCCAAGTTCCTCACCATATGGTCATTATACCTTCCATAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS-3UTR CAA 90 bp | GTAAGAGAGCTAACTAAAATCCTCCTGTGTCATGATACAAGTAACTTGTTTGCCTTTTCCCCTCTAGAGTaGAAATGCAGAATTCATAGC | + |
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Preference number: 5 (lower is better) Translates to: VRELTKILLCHDTSNLFAFSPLE*KCRIHS Trigger: GCTATGAATTCTGCATTTCAACTCTAGAGGGGAAAA...GGCAAACAAGTTACTTGTATCATGACACAGGAGGATTTTAGTTAGCTCTCTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS-3UTR CAA 90 bp | GGCTTCATTCCTTCTGCCACCATCATTTTTAGTAGTTATATACATACAAACAGAGAGAGATTTCAATTATaGCATTGTCTTCCTGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: GFIPSATIIFSSYIHTNRERFQL*HCLPAS Trigger: TGAAGCAGGAAGACAATGCAATAATTGAAATCTCTC...TCTGTTTGTATGTATATAACTACTAAAAATGATGGTGGCAGAAGGAATGAAGCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS GCA 72 bp | GGCCGTCGCCGCGGGTCGCGAGAACCAGGCGAGAGCTaGCAACAGCGGCAGCACCCCGTGCCCCCGCGCCGG | + |
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Preference number: 6 (lower is better) Translates to: GRRRGSREPGES*QQRQHPVPPRR Trigger: CCGGCGCGGGGGCACGGGGTGCTGCCGCTGTTGGCAGCTCTCGCCTGGTTCTCGCGACCCGCGGCGACGGCC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS TCA 72 bp | CTTCAGCAGCTGGATGATCTCGGCCTCCGCCTCGTCTaGCGCGTCCTCTCCCGGCTGCTCGGCCGTCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: LQQLDDLGLRLV*RVLSRLLGRRR Trigger: GCGGCGACGGCCGAGCAGCCGGGAGAGGACGCGTCAGACGAGGCGGAGGCCGAGATCATCCAGCTGCTGAAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS GCA 72 bp | GCTTCTGGCTCGTCTTTCATGATGCTCAACTTGGCTTaGTTCAGCAGCTGGATGATCTCGGCCTCCGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: ASGSSFMMLNLA*FSSWMISASAS Trigger: CGAGGCGGAGGCCGAGATCATCCAGCTGCTGAAGCAAGCCAAGTTGAGCATCATGAAAGACGAGCCAGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS CCA 72 bp | TCTTTCATGATGCTCAACTTGGCTTGCTTCAGCAGCTaGATGATCTCGGCCTCCGCCTCGTCTGACGCGTCC | + |
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Preference number: 6 (lower is better) Translates to: SFMMLNLACFSS*MISASASSDAS Trigger: GGACGCGTCAGACGAGGCGGAGGCCGAGATCATCCAGCTGCTGAAGCAAGCCAAGTTGAGCATCATGAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS GCA 72 bp | CTGTTGTCACTCTCATACGCAAGGCGAAGAGCGTCATaGAAAATCAGCTCGGCCGCTTCTGGCTCGTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: LLSLSYARRRAS*KISSAASGSSF Trigger: GAAAGACGAGCCAGAAGCGGCCGAGCTGATTTTGCATGACGCTCTTCGCCTTGCGTATGAGAGTGACAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS CCA 72 bp | GCGAAGAGCGTCATGCAAAATCAGCTCGGCCGCTTCTaGCTCGTCTTTCATGATGCTCAACTTGGCTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: AKSVMQNQLGRF*LVFHDAQLGLL Trigger: AAGCAAGCCAAGTTGAGCATCATGAAAGACGAGCCAGAAGCGGCCGAGCTGATTTTGCATGACGCTCTTCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS CAA 72 bp | TGCTCGCTTCAGCGCTTCCTGGTAGATCTCCTTTGCTaGTGTGTATCGCTCTCTGTGTATCAAAATGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: CSLQRFLVDLLC*CVSLSVYQNGS Trigger: GCTGCCATTTTGATACACAGAGAGCGATACACACAAGCAAAGGAGATCTACCAGGAAGCGCTGAAGCGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS CAA 90 bp | TTTCAGCTCTGCTCGCTTCAGCGCTTCCTGGTAGATCTCCTTTGCTaGTGTGTATCGCTCTCTGTGTATCAAAATGGCAGCCAGATTGCT | + |
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Preference number: 6 (lower is better) Translates to: FQLCSLQRFLVDLLC*CVSLSVYQNGSQIA Trigger: AGCAATCTGGCTGCCATTTTGATACACAGAGAGCGATACACACAAGCAAAGGAGATCTACCAGGAAGCGCTGAAGCGAGCAGAGCTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 |
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| CDS GCA 72 bp | CTGCATATAAATGTAGGCATCATCAAAGTGGCCCTGTaGATCCAGAGTAGTAGCCAAGTCACTCATCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: LHINVGIIKVAL*IQSSSQVTHQH Trigger: GTGCTGATGAGTGACTTGGCTACTACTCTGGATGCACAGGGCCACTTTGATGATGCCTACATTTATATGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 ENSMUST00000162385.2 |
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| CDS TCA 72 bp | GTGCAGCTCAGGGTGATTTATCTCTCTTGCCAGATCTaGCGCCCTCTGCATATAAATGTAGGCATCATCAAA | + |
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Preference number: 6 (lower is better) Translates to: VQLRVIYLSCQI*RPLHINVGIIK Trigger: TTTGATGATGCCTACATTTATATGCAGAGGGCGTCAGATCTGGCAAGAGAGATAAATCACCCTGAGCTGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 ENSMUST00000162385.2 |
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| CDS CCA 72 bp | CTTTTTCATACATCCTTTGTGCCTGTGATAGCTGCTTaGAGAATAGCAGATAGCGTGCACAAGAGTCTAAGC | + |
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Preference number: 6 (lower is better) Translates to: LFHTSFVPVIAA*RIADSVHKSLS Trigger: GCTTAGACTCTTGTGCACGCTATCTGCTATTCTCCAAGCAGCTATCACAGGCACAAAGGATGTATGAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050646.13 ENSMUST00000101075.11 ENSMUST00000162385.2 |
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