RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTC16 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000039021

Ensembl transcript IDs: ENSMUST00000066478.9, ENSMUST00000091059.12, ENSMUST00000125891.2, ENSMUST00000161089.8, ENSMUST00000161430.8, ENSMUST00000161950.8

Found 482 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGACCCCAGACCGCTCCCTCTCCACCCTCGAGGACTGAGGTTCCGTaGCTTCCCACAGCCAGACGCCCACCTGGCGGCGTTGAGAGCACA +
Preference number: 1 (lower is better)
Translates to: GPQTAPSPPSRTEVP*LPTARRPPGGVEST
Trigger: TGTGCTCTCAACGCCGCCAGGTGGGCGTCTGGCTGTGGGAAGCCACGGAACCTCAGTCCTCGAGGGTGGAGAGGGAGCGGTCTGGGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR GCA 90 bp GGACTCCGGTCATCTCTCCCGCCCCTTCTACTTCCCCATACCTGGTaGCCAACAGGTGACTGGTCTCTGCCCTGTGCTGGCCACCATCCC +
Preference number: 1 (lower is better)
Translates to: GLRSSLPPLLLPHTW*PTGDWSLPCAGHHP
Trigger: GGGATGGTGGCCAGCACAGGGCAGAGACCAGTCACCTGTTGGGCACCAGGTATGGGGAAGTAGAAGGGGCGGGAGAGATGACCGGAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CCA 90 bp AGTGCACGGTGCACCTTGCCCTGCACGGCCAGGGTGCTGGCATCTTaGAGAGACTGCTTGGCCTGGTCCACCATCTTCTGGAGTAGCCCT +
Preference number: 1 (lower is better)
Translates to: SARCTLPCTARVLAS*RDCLAWSTIFWSSP
Trigger: AGGGCTACTCCAGAAGATGGTGGACCAGGCCAAGCAGTCTCTCCAAGATGCCAGCACCCTGGCCGTGCAGGGCAAGGTGCACCGTGCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CCA 90 bp GCTGGCAGAAGCCCAGCTTCTCCTGCAGCACACCCATGCGCAAGTTaGCTCCTTCATCCAGCGGGCTCAGGGCCAGCGCTTGCTTGTAGT +
Preference number: 1 (lower is better)
Translates to: AGRSPASPAAHPCAS*LLHPAGSGPALACS
Trigger: ACTACAAGCAAGCGCTGGCCCTGAGCCCGCTGGATGAAGGAGCCAACTTGCGCATGGGTGTGCTGCAGGAGAAGCTGGGCTTCTGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CCA 90 bp TGCACTTCAGTGCACGGTGCACCTTGCCCTGCACGGCCAGGGTGCTaGCATCTTGGAGAGACTGCTTGGCCTGGTCCACCATCTTCTGGA +
Preference number: 1 (lower is better)
Translates to: CTSVHGAPCPARPGC*HLGETAWPGPPSSG
Trigger: TCCAGAAGATGGTGGACCAGGCCAAGCAGTCTCTCCAAGATGCCAGCACCCTGGCCGTGCAGGGCAAGGTGCACCGTGCACTGAAGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR GCA 90 bp TCAATGGCACAGTTGATGCACTTCAGTGCACGGTGCACCTTGCCCTaGACGGCCAGGGTGCTGGCATCTTGGAGAGACTGCTTGGCCTGG +
Preference number: 1 (lower is better)
Translates to: SMAQLMHFSARCTLP*TARVLASWRDCLAW
Trigger: CCAGGCCAAGCAGTCTCTCCAAGATGCCAGCACCCTGGCCGTGCAGGGCAAGGTGCACCGTGCACTGAAGTGCATCAACTGTGCCATTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR TCA 90 bp TCTTTTATTCTTTCTGAGGTAAGGTTTCGGGCCGCTAGTTACCCGTaGCCATGGCAACGCGGGACTGGGTGGTTCGCGGGCTCCCCCAGG +
Preference number: 1 (lower is better)
Translates to: SFILSEVRFRAASYP*PWQRGTGWFAGSPR
Trigger: CCTGGGGGAGCCCGCGAACCACCCAGTCCCGCGTTGCCATGGTCACGGGTAACTAGCGGCCCGAAACCTTACCTCAGAAAGAATAAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
3UTR GCA 90 bp GGGATCCAGGGGATTGTTCTCAATGGCACAGTTGATGCACTTCAGTaGACGGTGCACCTTGCCCTGCACGGCCAGGGTGCTGGCATCTTG +
Preference number: 1 (lower is better)
Translates to: GIQGIVLNGTVDALQ*TVHLALHGQGAGIL
Trigger: CAAGATGCCAGCACCCTGGCCGTGCAGGGCAAGGTGCACCGTGCACTGAAGTGCATCAACTGTGCCATTGAGAACAATCCCCTGGATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CCA 90 bp GGAGAGACTGCTTGGCCTGGTCCACCATCTTCTGGAGTAGCCCTTTaGCCTGTGCGTGCAAGGGATCTAGGAGCAAGGCGCTTCGAAGGT +
Preference number: 1 (lower is better)
Translates to: GETAWPGPPSSGVAL*PVRARDLGARRFEG
Trigger: ACCTTCGAAGCGCCTTGCTCCTAGATCCCTTGCACGCACAGGCCAAAGGGCTACTCCAGAAGATGGTGGACCAGGCCAAGCAGTCTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CCA 90 bp GTTCTGCAGGAACTGTCGGCACTTGGCCCGGTGCAGGTAGTACTGTaGTTTCTGAGGGCTGTGCCTTATGGCCTCCGAGAAGTGCTCCTC +
Preference number: 1 (lower is better)
Translates to: VLQELSALGPVQVVL*FLRAVPYGLREVLL
Trigger: GAGGAGCACTTCTCGGAGGCCATAAGGCACAGCCCTCAGAAACCACAGTACTACCTGCACCGGGCCAAGTGCCGACAGTTCCTGCAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR GCA 90 bp AGGGGATTGTTCTCAATGGCACAGTTGATGCACTTCAGTGCACGGTaGACCTTGCCCTGCACGGCCAGGGTGCTGGCATCTTGGAGAGAC +
Preference number: 1 (lower is better)
Translates to: RGLFSMAQLMHFSAR*TLPCTARVLASWRD
Trigger: GTCTCTCCAAGATGCCAGCACCCTGGCCGTGCAGGGCAAGGTGCACCGTGCACTGAAGTGCATCAACTGTGCCATTGAGAACAATCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CCA 90 bp GTGCTGGCATCTTGGAGAGACTGCTTGGCCTGGTCCACCATCTTCTaGAGTAGCCCTTTGGCCTGTGCGTGCAAGGGATCTAGGAGCAAG +
Preference number: 1 (lower is better)
Translates to: VLASWRDCLAWSTIF*SSPLACACKGSRSK
Trigger: CTTGCTCCTAGATCCCTTGCACGCACAGGCCAAAGGGCTACTCCAGAAGATGGTGGACCAGGCCAAGCAGTCTCTCCAAGATGCCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CCA 90 bp TGGCCCGGTGCAGGTAGTACTGTGGTTTCTGAGGGCTGTGCCTTATaGCCTCCGAGAAGTGCTCCTCTGCTGTCTGGAACTGCCTGTGTT +
Preference number: 1 (lower is better)
Translates to: WPGAGSTVVSEGCAL*PPRSAPLLSGTACV
Trigger: AACACAGGCAGTTCCAGACAGCAGAGGAGCACTTCTCGGAGGCCATAAGGCACAGCCCTCAGAAACCACAGTACTACCTGCACCGGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR GCA 90 bp TGGTTTCTGAGGGCTGTGCCTTATGGCCTCCGAGAAGTGCTCCTCTaGTGTCTGGAACTGCCTGTGTTTCTGCTGGCAGAAGCCCAGCTT +
Preference number: 1 (lower is better)
Translates to: WFLRAVPYGLREVLL*CLELPVFLLAEAQL
Trigger: AAGCTGGGCTTCTGCCAGCAGAAACACAGGCAGTTCCAGACAGCAGAGGAGCACTTCTCGGAGGCCATAAGGCACAGCCCTCAGAAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CCA 90 bp CCAACGTTACCAGCCACCAGACCGGACCAAAGACTCTCACCCGAGTaGGAACCACCCAATGTCTTCTCCCCCTGCCCTTTCTCTGTTCAA +
Preference number: 1 (lower is better)
Translates to: PTLPATRPDQRLSPE*EPPNVFSPCPFSVQ
Trigger: TTGAACAGAGAAAGGGCAGGGGGAGAAGACATTGGGTGGTTCCCACTCGGGTGAGAGTCTTTGGTCCGGTCTGGTGGCTGGTAACGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR TCA 90 bp AGAAGAAGAAGTTGGGATCCAGGGGATTGTTCTCAATGGCACAGTTaGTGCACTTCAGTGCACGGTGCACCTTGCCCTGCACGGCCAGGG +
Preference number: 1 (lower is better)
Translates to: RRRSWDPGDCSQWHS*CTSVHGAPCPARPG
Trigger: CCCTGGCCGTGCAGGGCAAGGTGCACCGTGCACTGAAGTGCATCAACTGTGCCATTGAGAACAATCCCCTGGATCCCAACTTCTTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR GCA 90 bp AGTCTTCCACAGCATGGTCAAATTGCTGGAGCCGTCTACGCAAGGTaGCCCTATCGTATTGCAGGGCAGGTAGCAGGGAGGGACATGAGA +
Preference number: 1 (lower is better)
Translates to: SLPQHGQIAGAVYAR*PYRIAGQVAGRDMR
Trigger: TCTCATGTCCCTCCCTGCTACCTGCCCTGCAATACGATAGGGGCACCTTGCGTAGACGGCTCCAGCAATTTGACCATGCTGTGGAAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CCA 90 bp AGGGATCTAGGAGCAAGGCGCTTCGAAGGTCCTGATAGCAGAGCTTaGCCTTCTGGAAGAAGTTGTAGAGCCGAGCCCGGAGGATGTAGA +
Preference number: 1 (lower is better)
Translates to: RDLGARRFEGPDSRA*PSGRSCRAEPGGCR
Trigger: TCTACATCCTCCGGGCTCGGCTCTACAACTTCTTCCAGAAGGCCAAGCTCTGCTATCAGGACCTTCGAAGCGCCTTGCTCCTAGATCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR GCA 90 bp CAAGACGTTCCTGCTTCCAGAGCTTCACCAGGACTTGGGCTTTCCTaGGTTCCAATAACCGCTGCACCACAGTGCTCTGAGGGTAGATGT +
Preference number: 1 (lower is better)
Translates to: QDVPASRASPGLGLS*VPITAAPQCSEGRC
Trigger: ACATCTACCCTCAGAGCACTGTGGTGCAGCGGTTATTGGAACGCAGGAAAGCCCAAGTCCTGGTGAAGCTCTGGAAGCAGGAACGTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CCA 90 bp GTGTCAGTCACCATGTCCATTGCCTTCAGGAAGTCTTCCACAGCATaGTCAAATTGCTGGAGCCGTCTACGCAAGGTGCCCCTATCGTAT +
Preference number: 1 (lower is better)
Translates to: VSVTMSIAFRKSSTA*SNCWSRLRKVPLSY
Trigger: ATACGATAGGGGCACCTTGCGTAGACGGCTCCAGCAATTTGACCATGCTGTGGAAGACTTCCTGAAGGCAATGGACATGGTGACTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR TCA 90 bp ACATTGACCAAAGTTTCTTACTGTCCTGGGAGGAGGCAGCTTGGCTaGAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAG +
Preference number: 1 (lower is better)
Translates to: TLTKVSYCPGRRQLG*NLFIAQEGLHWPFE
Trigger: CTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAGAAACTTTGGTCAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
3UTR-3UTR TCA 90 bp GGCTTCCCACAGCCAGACGCCCACCTGGCGGCGTTGAGAGCACAAGGCAGTCCCAGTCGTGATACCGCTTaGGGGCCAGCAGGCAGGCCA +
Preference number: 2 (lower is better)
Translates to: GFPQPDAHLAALRAQGSPSRDTA*GPAGRP
Trigger: TGGCCTGCCTGCTGGCCCTCAAGCGGTATCACGACT...GGGACTGCCTTGTGCTCTCAACGCCGCCAGGTGGGCGTCTGGCTGTGGGAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CAA 90 bp CATGCGCAAGTTGGCTCCTTCATCCAGCGGGCTCAGGGCCAGCGCTaGCTTGTAGTCAGCCTCCGCGAAGGCCAGGTTGCCCAGCTGGAA +
Preference number: 2 (lower is better)
Translates to: HAQVGSFIQRAQGQR*LVVSLREGQVAQLE
Trigger: TTCCAGCTGGGCAACCTGGCCTTCGCGGAGGCTGACTACAAGCAAGCGCTGGCCCTGAGCCCGCTGGATGAAGGAGCCAACTTGCGCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR GCA 90 bp CTCGGGATTGAGAAGCAGTACAGTAGCGACATCCAGGCGGGCCCCCAGAGTGTTGTGCACGGTGCACCTTaGCCTGCACGGCCAGGGTGC +
Preference number: 2 (lower is better)
Translates to: LGIEKQYSSDIQAGPQSVVHGAP*PARPGC
Trigger: GCACCCTGGCCGTGCAGGGCAAGGTGCACCGTGCAC...AACACTCTGGGGGCCCGCCTGGATGTCGCTACTGTACTGCTTCTCAATCCCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CAA 90 bp GAGGGCCAGCAGGCAGGCCATGCATCGGTAACTGAAGGAAGCGTTTaGGGGCTGGAGGTCGGAGGCTTGCAGGAAGACACAGAGGGCTTC +
Preference number: 2 (lower is better)
Translates to: EGQQAGHASVTEGSV*GLEVGGLQEDTEGF
Trigger: GAAGCCCTCTGTGTCTTCCTGCAAGCCTCCGACCTCCAGCCCCAAAACGCTTCCTTCAGTTACCGATGCATGGCCTGCCTGCTGGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR CCA 90 bp CCCCATACCTGGTGCCCAACAGGTGACTGGTCTCTGCCCTGTGCTGGCCACCATGGAACTGTCGGCACTTaGCCCGGTGCAGGTAGTACT +
Preference number: 2 (lower is better)
Translates to: PHTWCPTGDWSLPCAGHHGTVGT*PGAGST
Trigger: AGTACTACCTGCACCGGGCCAAGTGCCGACAGTTCC...ATGGTGGCCAGCACAGGGCAGAGACCAGTCACCTGTTGGGCACCAGGTATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR CCA 90 bp TTCCCCATACCTGGTGCCCAACAGGTGACTGGTCTCTGCCCTGTGCTGGCCACCCCCCACCACATCCCTTaGGGTTGGGACAAAGCTGTC +
Preference number: 2 (lower is better)
Translates to: FPIPGAQQVTGLCPVLATPHHIP*GWDKAV
Trigger: GACAGCTTTGTCCCAACCCCAAGGGATGTGGTGGGG...GGTGGCCAGCACAGGGCAGAGACCAGTCACCTGTTGGGCACCAGGTATGGGGAA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR GCA 90 bp TTCCCCATACCTGGTGCCCAACAGGTGACTGGTCTCTGCCCTGTGCTGGCCACCCGAGAAGTGCTCCTCTaGTGTCTGGAACTGCCTGTG +
Preference number: 2 (lower is better)
Translates to: FPIPGAQQVTGLCPVLATREVLL*CLELPV
Trigger: CACAGGCAGTTCCAGACAGCAGAGGAGCACTTCTCG...GGTGGCCAGCACAGGGCAGAGACCAGTCACCTGTTGGGCACCAGGTATGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR CCA 90 bp GCCACCCAGCTCACCCCCACGGTTGATGTACAAGCCCTTCTCATTCTGCTCGTCGCACGGCCAGGGTGCTaGCATCTTGGAGAGACTGCT +
Preference number: 2 (lower is better)
Translates to: ATQLTPTVDVQALLILLVARPGC*HLGETA
Trigger: AGCAGTCTCTCCAAGATGCCAGCACCCTGGCCGTGC...GACGAGCAGAATGAGAAGGGCTTGTACATCAACCGTGGGGGTGAGCTGGGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR CCA 90 bp GCCACCCAGCTCACCCCCACGGTTGATGTACAAGCCCTTCTCATTCTGCTCGTCCTCAGCAGGCCTGGCTaGAGGCCTAAGATTCCCAGG +
Preference number: 2 (lower is better)
Translates to: ATQLTPTVDVQALLILLVLSRPG*RPKIPR
Trigger: CCTGGGAATCTTAGGCCTCCAGCCAGGCCTGCTGAG...GACGAGCAGAATGAGAAGGGCTTGTACATCAACCGTGGGGGTGAGCTGGGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CAA 90 bp TGGAGAGACTGCTTGGCCTGGTCCACCATCTTCTGGAGTAGCCCTTaGGCCTGTGCGTGCAAGGGATCTAGGAGCAAGGCGCTTCGAAGG +
Preference number: 2 (lower is better)
Translates to: WRDCLAWSTIFWSSP*ACACKGSRSKALRR
Trigger: CCTTCGAAGCGCCTTGCTCCTAGATCCCTTGCACGCACAGGCCAAAGGGCTACTCCAGAAGATGGTGGACCAGGCCAAGCAGTCTCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR TCA 90 bp CACATCCCTTGGGGTTGGGACAAAGCTGTCCAGGGCAGAACCTTAGGACATGCTGCATCCCCAACTCCCTaGGCAAAGCTAGGGCCCAGC +
Preference number: 2 (lower is better)
Translates to: HIPWGWDKAVQGRTLGHAASPTP*AKLGPS
Trigger: GCTGGGCCCTAGCTTTGCTCAGGGAGTTGGGGATGC...AGCATGTCCTAAGGTTCTGCCCTGGACAGCTTTGTCCCAACCCCAAGGGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR GCA 90 bp GCCACCCAGCTCACCCCCACGGTTGATGTACAAGCCCTTCTCATTCTGCTCGTCACCACGAAGCAGGTCTaGAGGAGGTCCAGCCCCTTT +
Preference number: 2 (lower is better)
Translates to: ATQLTPTVDVQALLILLVTTKQV*RRSSPF
Trigger: AAAGGGGCTGGACCTCCTGCAGACCTGCTTCGTGGT...GACGAGCAGAATGAGAAGGGCTTGTACATCAACCGTGGGGGTGAGCTGGGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR TCA 90 bp TTCCCCATACCTGGTGCCCAACAGGTGACTGGTCTCTGCCCTGTGCTGGCCACCAGTCACAGAGTTGGATaGAGGCCTCAGCACGGAATA +
Preference number: 2 (lower is better)
Translates to: FPIPGAQQVTGLCPVLATSHRVG*RPQHGI
Trigger: TATTCCGTGCTGAGGCCTTCATCCAACTCTGTGACT...GGTGGCCAGCACAGGGCAGAGACCAGTCACCTGTTGGGCACCAGGTATGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CAA 90 bp TTGTTCTCAATGGCACAGTTGATGCACTTCAGTGCACGGTGCACCTaGCCCTGCACGGCCAGGGTGCTGGCATCTTGGAGAGACTGCTTG +
Preference number: 2 (lower is better)
Translates to: LFSMAQLMHFSARCT*PCTARVLASWRDCL
Trigger: CAAGCAGTCTCTCCAAGATGCCAGCACCCTGGCCGTGCAGGGCAAGGTGCACCGTGCACTGAAGTGCATCAACTGTGCCATTGAGAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR GCA 90 bp ATTTCTACTCTCATGTCCTCCCAACACAAACTACTCAGCAGGCCTGGCTGGAGGGCGCTGGCCCTGCCCTaGTTCACCTCCCTAGTGATG +
Preference number: 2 (lower is better)
Translates to: ISTLMSSQHKLLSRPGWRALALP*FTSLVM
Trigger: CATCACTAGGGAGGTGAAGCAGGGCAGGGCCAGCGC...CCTCCAGCCAGGCCTGCTGAGTAGTTTGTGTTGGGAGGACATGAGAGTAGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR CCA 90 bp CTCGGGATTGAGAAGCAGTACAGTAGCGACATCCAGGCGGGCCCCCAGAGTGTTTGCTCCTCTGCTGTCTaGAACTGCCTGTGTTTCTGC +
Preference number: 2 (lower is better)
Translates to: LGIEKQYSSDIQAGPQSVCSSAV*NCLCFC
Trigger: GCAGAAACACAGGCAGTTCCAGACAGCAGAGGAGCA...AACACTCTGGGGGCCCGCCTGGATGTCGCTACTGTACTGCTTCTCAATCCCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CAA 90 bp GCATCGGTAACTGAAGGAAGCGTTTTGGGGCTGGAGGTCGGAGGCTaGCAGGAAGACACAGAGGGCTTCCTGGAAGTCACACAGCTCATA +
Preference number: 2 (lower is better)
Translates to: ASVTEGSVLGLEVGG*QEDTEGFLEVTQLI
Trigger: TATGAGCTGTGTGACTTCCAGGAAGCCCTCTGTGTCTTCCTGCAAGCCTCCGACCTCCAGCCCCAAAACGCTTCCTTCAGTTACCGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR CCA 90 bp GCCACCCAGCTCACCCCCACGGTTGATGTACAAGCCCTTCTCATTCTGCTCGTCACACAGAGGGCTTCCTaGAAGTCACACAGCTCATAC +
Preference number: 2 (lower is better)
Translates to: ATQLTPTVDVQALLILLVTQRAS*KSHSSY
Trigger: GTATGAGCTGTGTGACTTCCAGGAAGCCCTCTGTGT...GACGAGCAGAATGAGAAGGGCTTGTACATCAACCGTGGGGGTGAGCTGGGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR CCA 90 bp TTCCCCATACCTGGTGCCCAACAGGTGACTGGTCTCTGCCCTGTGCTGGCCACCGGAAGAAGAAGAAGTTaGGATCCAGGGGATTGTTCT +
Preference number: 2 (lower is better)
Translates to: FPIPGAQQVTGLCPVLATGRRRS*DPGDCS
Trigger: AGAACAATCCCCTGGATCCCAACTTCTTCTTCTTCC...GGTGGCCAGCACAGGGCAGAGACCAGTCACCTGTTGGGCACCAGGTATGGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CAA 90 bp AAGAAGAAGAAGTTGGGATCCAGGGGATTGTTCTCAATGGCACAGTaGATGCACTTCAGTGCACGGTGCACCTTGCCCTGCACGGCCAGG +
Preference number: 2 (lower is better)
Translates to: KKKKLGSRGLFSMAQ*MHFSARCTLPCTAR
Trigger: CCTGGCCGTGCAGGGCAAGGTGCACCGTGCACTGAAGTGCATCAACTGTGCCATTGAGAACAATCCCCTGGATCCCAACTTCTTCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR GCA 90 bp TCAGGAAGTCTTCCACAGCATGGTCAAATTGCTGGAGCCGTCTACGCAAGGTGCGTTGATGCACTTCAGTaGACGGTGCACCTTGCCCTG +
Preference number: 2 (lower is better)
Translates to: SGSLPQHGQIAGAVYARCVDALQ*TVHLAL
Trigger: CAGGGCAAGGTGCACCGTGCACTGAAGTGCATCAAC...GCACCTTGCGTAGACGGCTCCAGCAATTTGACCATGCTGTGGAAGACTTCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR CCA 90 bp AGTCACTTCCTCTTCAGGGGTCCCAAGACGTTCCTGCTTCCAGAGCTTCACCAGGAGAAGTCACAGAGTTaGATGAAGGCCTCAGCACGG +
Preference number: 2 (lower is better)
Translates to: SHFLFRGPKTFLLPELHQEKSQS*MKASAR
Trigger: CCGTGCTGAGGCCTTCATCCAACTCTGTGACTTCTC...CTGGTGAAGCTCTGGAAGCAGGAACGTCTTGGGACCCCTGAAGAGGAAGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR GCA 90 bp GCACCAAATCCTTGGGGGACCAGATACAATTTCTACTCTCATGTCCTCCCAACACATAGGAGTAGGCCCTaGGGAGGTTCTGGAGGGCAG +
Preference number: 2 (lower is better)
Translates to: APNPWGTRYNFYSHVLPTHRSRP*GGSGGQ
Trigger: CTGCCCTCCAGAACCTCCGCAGGGCCTACTCCTATG...TGTTGGGAGGACATGAGAGTAGAAATTGTATCTGGTCCCCCAAGGATTTGGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR TCA 90 bp TTGATGTACAAGCCCTTCTCATTCTGCTCGTCTCTGATAGCCTTGTTCAGCAGCGAAGTCTGGGGAGGTTaGGAGACCCTCCTGAGACCA +
Preference number: 2 (lower is better)
Translates to: LMYKPFSFCSSLIALFSSEVWGG*ETLLRP
Trigger: TGGTCTCAGGAGGGTCTCTCAACCTCCCCAGACTTC...GCTGCTGAACAAGGCTATCAGAGACGAGCAGAATGAGAAGGGCTTGTACATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR TCA 90 bp ATTTCTACTCTCATGTCCTCCCAACACAAACTACTCAGCAGGCCTGGCTGGAGGACCTCTATGGTGCCATaGCCACAGTCAAAAGCAGGG +
Preference number: 2 (lower is better)
Translates to: ISTLMSSQHKLLSRPGWRTSMVP*PQSKAG
Trigger: CCCTGCTTTTGACTGTGGTCATGGCACCATAGAGGT...CCTCCAGCCAGGCCTGCTGAGTAGTTTGTGTTGGGAGGACATGAGAGTAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR CCA 90 bp TCTGAGGGTAGATGTTCTTCGGCCCATTTTCTATCATCCGACTTAGCTGGAGCTTGTAGACATCAGCGCTaGCCCTGCCCTGCTTCACCT +
Preference number: 2 (lower is better)
Translates to: SEGRCSSAHFLSSDLAGACRHQR*PCPASP
Trigger: AGGTGAAGCAGGGCAGGGCCAGCGCTGATGTCTACA...AGCTCCAGCTAAGTCGGATGATAGAAAATGGGCCGAAGAACATCTACCCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CAA 90 bp TTTGTACCCCAGTACCGGAAGAAGAAGAAGTTGGGATCCAGGGGATaGTTCTCAATGGCACAGTTGATGCACTTCAGTGCACGGTGCACC +
Preference number: 2 (lower is better)
Translates to: FVPQYRKKKKLGSRG*FSMAQLMHFSARCT
Trigger: GGTGCACCGTGCACTGAAGTGCATCAACTGTGCCATTGAGAACAATCCCCTGGATCCCAACTTCTTCTTCTTCCGGTACTGGGGTACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR GCA 90 bp CAGTGCTCTGAGGGTAGATGTTCTTCGGCCCATTTTCTATCATCCGACTTAGCTTCTGCTGTCTGGAACTaGCTGTGTTTCTGCTGGCAG +
Preference number: 2 (lower is better)
Translates to: QCSEGRCSSAHFLSSDLASAVWN*LCFCWQ
Trigger: CTGCCAGCAGAAACACAGGCAGTTCCAGACAGCAGA...AGCTAAGTCGGATGATAGAAAATGGGCCGAAGAACATCTACCCTCAGAGCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR CCA 90 bp GGAAGTCTTCCACAGCATGGTCAAATTGCTGGAGCCGTCTACGCAAGGTGCCCCGTTATTTCTCAAGGATaGTTTTCCAGTTTGGAAGTG +
Preference number: 2 (lower is better)
Translates to: GSLPQHGQIAGAVYARCPVISQG*FSSLEV
Trigger: CACTTCCAAACTGGAAAACCATCCTTGAGAAATAAC...GGGGCACCTTGCGTAGACGGCTCCAGCAATTTGACCATGCTGTGGAAGACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR GCA 90 bp TTGATGTACAAGCCCTTCTCATTCTGCTCGTCTCTGATAGCCTTGTTCAGCAGCAGTCACCATGTCCATTaGCTTCAGGAAGTCTTCCAC +
Preference number: 2 (lower is better)
Translates to: LMYKPFSFCSSLIALFSSSHHVH*LQEVFH
Trigger: GTGGAAGACTTCCTGAAGGCAATGGACATGGTGACT...GCTGCTGAACAAGGCTATCAGAGACGAGCAGAATGAGAAGGGCTTGTACATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR CCA 90 bp CATCACATGCCCCTGTTCAGGCCTTTTTGTATACATACTTTAGCCAACTATCTACTGAAGGAAGCGTTTTaGGGCTGGAGGTCGGAGGCT +
Preference number: 2 (lower is better)
Translates to: HHMPLFRPFCIHTLANYLLKEAF*GWRSEA
Trigger: AGCCTCCGACCTCCAGCCCCAAAACGCTTCCTTCAG...TAGATAGTTGGCTAAAGTATGTATACAAAAAGGCCTGAACAGGGGCATGTGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR CCA 90 bp TCTGAGGGTAGATGTTCTTCGGCCCATTTTCTATCATCCGACTTAGCTGGAGCTCCTGATAGCAGAGCTTaGCCTTCTGGAAGAAGTTGT +
Preference number: 2 (lower is better)
Translates to: SEGRCSSAHFLSSDLAGAPDSRA*PSGRSC
Trigger: ACAACTTCTTCCAGAAGGCCAAGCTCTGCTATCAGG...AGCTCCAGCTAAGTCGGATGATAGAAAATGGGCCGAAGAACATCTACCCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR CCA 90 bp TCTGAGGGTAGATGTTCTTCGGCCCATTTTCTATCATCCGACTTAGCTGGAGCTATTCCCAGGTTACCATaGAAACCACCTCTATGGTGC +
Preference number: 2 (lower is better)
Translates to: SEGRCSSAHFLSSDLAGAIPRLP*KPPLWC
Trigger: GCACCATAGAGGTGGTTTCCATGGTAACCTGGGAAT...AGCTCCAGCTAAGTCGGATGATAGAAAATGGGCCGAAGAACATCTACCCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR CCA 90 bp TTGATGTACAAGCCCTTCTCATTCTGCTCGTCTCTGATAGCCTTGTTCAGCAGCAAGTCTTCCACAGCATaGTCAAATTGCTGGAGCCGT +
Preference number: 2 (lower is better)
Translates to: LMYKPFSFCSSLIALFSSKSSTA*SNCWSR
Trigger: ACGGCTCCAGCAATTTGACCATGCTGTGGAAGACTT...GCTGCTGAACAAGGCTATCAGAGACGAGCAGAATGAGAAGGGCTTGTACATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR CCA 90 bp TTGATGTACAAGCCCTTCTCATTCTGCTCGTCTCTGATAGCCTTGTTCAGCAGCATGGCACCAAATCCTTaGGGGACCAGATACAATTTC +
Preference number: 2 (lower is better)
Translates to: LMYKPFSFCSSLIALFSSMAPNP*GTRYNF
Trigger: GAAATTGTATCTGGTCCCCCAAGGATTTGGTGCCAT...GCTGCTGAACAAGGCTATCAGAGACGAGCAGAATGAGAAGGGCTTGTACATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR CCA 90 bp ACTTCCTCTTCAGGGGTCCCAAGACGTTCCTGCTTCCAGAGCTTCACCAGGACTCATGTACTTAGTTTATaGGAATCTTATGGGTTTCTG +
Preference number: 2 (lower is better)
Translates to: TSSSGVPRRSCFQSFTRTHVLSL*ESYGFL
Trigger: CAGAAACCCATAAGATTCCCATAAACTAAGTACATG...AGTCCTGGTGAAGCTCTGGAAGCAGGAACGTCTTGGGACCCCTGAAGAGGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR CCA 90 bp CATCACATGCCCCTGTTCAGGCCTTTTTGTATACATACTTTAGCCAACTATCTACTTGGAGAGACTGCTTaGCCTGGTCCACCATCTTCT +
Preference number: 2 (lower is better)
Translates to: HHMPLFRPFCIHTLANYLLGETA*PGPPSS
Trigger: AGAAGATGGTGGACCAGGCCAAGCAGTCTCTCCAAG...TAGATAGTTGGCTAAAGTATGTATACAAAAAGGCCTGAACAGGGGCATGTGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CAA 90 bp TACTTTAGCCAACTATCTAGAGGAGAAAATCCAGGATTAGGGAGATaGAATGGCACCAAATCCTTGGGGGACCAGATACAATTTCTACTC +
Preference number: 2 (lower is better)
Translates to: YFSQLSRGENPGLGR*NGTKSLGDQIQFLL
Trigger: GAGTAGAAATTGTATCTGGTCCCCCAAGGATTTGGTGCCATTCAATCTCCCTAATCCTGGATTTTCTCCTCTAGATAGTTGGCTAAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR TCA 90 bp AGGCCTTTTTGTATACATACTTTAGCCAACTATCTAGAGGAGAAAATCCAGGATTCTCAATGGCACAGTTaGTGCACTTCAGTGCACGGT +
Preference number: 2 (lower is better)
Translates to: RPFCIHTLANYLEEKIQDSQWHS*CTSVHG
Trigger: ACCGTGCACTGAAGTGCATCAACTGTGCCATTGAGA...ATCCTGGATTTTCTCCTCTAGATAGTTGGCTAAAGTATGTATACAAAAAGGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR TCA 72 bp GGGACCCCAGACCGCTCCCTCTCCACCCTCGAGGACTaGGGTTCCGTGGCTTCCCACAGCCAGACGCCCACC +
Preference number: 3 (lower is better)
Translates to: GTPDRSLSTLED*GSVASHSQTPT
Trigger: GGTGGGCGTCTGGCTGTGGGAAGCCACGGAACCTCAGTCCTCGAGGGTGGAGAGGGAGCGGTCTGGGGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CCA 72 bp GAGCCCCAAGGAAGGGGAGCCGGGAGTTGTAGGCAATaGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAG +
Preference number: 3 (lower is better)
Translates to: EPQGRGAGSCRQ*AWLPRSGAHRE
Trigger: CTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCCCGGCTCCCCTTCCTTGGGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
3UTR CCA 72 bp ACCGCTCCCTCTCCACCCTCGAGGACTGAGGTTCCGTaGCTTCCCACAGCCAGACGCCCACCTGGCGGCGTT +
Preference number: 3 (lower is better)
Translates to: TAPSPPSRTEVP*LPTARRPPGGV
Trigger: AACGCCGCCAGGTGGGCGTCTGGCTGTGGGAAGCCACGGAACCTCAGTCCTCGAGGGTGGAGAGGGAGCGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR CAA 90 bp TTCCCCATACCTGGTGCCCAACAGGTGACTGGTCTCTGCCCTGTGCTGGCCACCAGTGCACGGTGCACCTaGCCCTGCACGGCCAGGGTG +
Preference number: 3 (lower is better)
Translates to: FPIPGAQQVTGLCPVLATSARCT*PCTARV
Trigger: CACCCTGGCCGTGCAGGGCAAGGTGCACCGTGCACT...GGTGGCCAGCACAGGGCAGAGACCAGTCACCTGTTGGGCACCAGGTATGGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR GCA 72 bp TCAGTGCACGGTGCACCTTGCCCTGCACGGCCAGGGTaGTGGCATCTTGGAGAGACTGCTTGGCCTGGTCCA +
Preference number: 3 (lower is better)
Translates to: SVHGAPCPARPG*WHLGETAWPGP
Trigger: TGGACCAGGCCAAGCAGTCTCTCCAAGATGCCAGCACCCTGGCCGTGCAGGGCAAGGTGCACCGTGCACTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CCA 72 bp AGCCCAGCTTCTCCTGCAGCACACCCATGCGCAAGTTaGCTCCTTCATCCAGCGGGCTCAGGGCCAGCGCTT +
Preference number: 3 (lower is better)
Translates to: SPASPAAHPCAS*LLHPAGSGPAL
Trigger: AAGCGCTGGCCCTGAGCCCGCTGGATGAAGGAGCCAACTTGCGCATGGGTGTGCTGCAGGAGAAGCTGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR CAA 90 bp CCCCATACCTGGTGCCCAACAGGTGACTGGTCTCTGCCCTGTGCTGGCCACCATCGACTTAGCTGGAGCTaGGCCAGTTCGGCCACTTGG +
Preference number: 3 (lower is better)
Translates to: PHTWCPTGDWSLPCAGHHRLSWS*ASSATW
Trigger: CCAAGTGGCCGAACTGGCCAAGCTCCAGCTAAGTCG...ATGGTGGCCAGCACAGGGCAGAGACCAGTCACCTGTTGGGCACCAGGTATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR TCA 72 bp CTTTCTGAGGTAAGGTTTCGGGCCGCTAGTTACCCGTaGCCATGGCAACGCGGGACTGGGTGGTTCGCGGGC +
Preference number: 3 (lower is better)
Translates to: LSEVRFRAASYP*PWQRGTGWFAG
Trigger: GCCCGCGAACCACCCAGTCCCGCGTTGCCATGGTCACGGGTAACTAGCGGCCCGAAACCTTACCTCAGAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
3UTR TCA 72 bp TGCTTCACCTCCCTAGTGATGAGGGCGAGGCAGTCGTaGTACCGCTTGAGGGCCAGCAGGCAGGCCATGCAT +
Preference number: 3 (lower is better)
Translates to: CFTSLVMRARQS*YRLRASRQAMH
Trigger: ATGCATGGCCTGCCTGCTGGCCCTCAAGCGGTATCACGACTGCCTCGCCCTCATCACTAGGGAGGTGAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR TCA 72 bp GAGAGACTGAAGTCTGGGGAGGTTGAGAGACCCTCCTaGGACCACGAAGCAGGTCTGCAGGAGGTCCAGCCC +
Preference number: 3 (lower is better)
Translates to: ERLKSGEVERPS*DHEAGLQEVQP
Trigger: GGGCTGGACCTCCTGCAGACCTGCTTCGTGGTCTCAGGAGGGTCTCTCAACCTCCCCAGACTTCAGTCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR TCA 72 bp TGCCCAAGGGCTAGAATCTGTTGTCCCTGGACTATGTaGGACCCAGGGACCCCAGACCGCTCCCTCTCCACC +
Preference number: 3 (lower is better)
Translates to: CPRARICCPWTM*DPGTPDRSLST
Trigger: GGTGGAGAGGGAGCGGTCTGGGGTCCCTGGGTCTCACATAGTCCAGGGACAACAGATTCTAGCCCTTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR GCA 72 bp CAGTTGATGCACTTCAGTGCACGGTGCACCTTGCCCTaGACGGCCAGGGTGCTGGCATCTTGGAGAGACTGC +
Preference number: 3 (lower is better)
Translates to: QLMHFSARCTLP*TARVLASWRDC
Trigger: GCAGTCTCTCCAAGATGCCAGCACCCTGGCCGTGCAGGGCAAGGTGCACCGTGCACTGAAGTGCATCAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR GCA 72 bp GCGCTTGCTTGTAGTCAGCCTCCGCGAAGGCCAGGTTaGCCAGCTGGAAGAAGCAATCTAGGAGCCGAGGGT +
Preference number: 3 (lower is better)
Translates to: ALACSQPPRRPG*PAGRSNLGAEG
Trigger: ACCCTCGGCTCCTAGATTGCTTCTTCCAGCTGGGCAACCTGGCCTTCGCGGAGGCTGACTACAAGCAAGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR GCA 72 bp TCATCTCTCCCGCCCCTTCTACTTCCCCATACCTGGTaGCCAACAGGTGACTGGTCTCTGCCCTGTGCTGGC +
Preference number: 3 (lower is better)
Translates to: SSLPPLLLPHTW*PTGDWSLPCAG
Trigger: GCCAGCACAGGGCAGAGACCAGTCACCTGTTGGGCACCAGGTATGGGGAAGTAGAAGGGGCGGGAGAGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CCA 72 bp GCTTGGCCTGGTCCACCATCTTCTGGAGTAGCCCTTTaGCCTGTGCGTGCAAGGGATCTAGGAGCAAGGCGC +
Preference number: 3 (lower is better)
Translates to: AWPGPPSSGVAL*PVRARDLGARR
Trigger: GCGCCTTGCTCCTAGATCCCTTGCACGCACAGGCCAAAGGGCTACTCCAGAAGATGGTGGACCAGGCCAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CCA 72 bp CCAGCCACCAGACCGGACCAAAGACTCTCACCCGAGTaGGAACCACCCAATGTCTTCTCCCCCTGCCCTTTC +
Preference number: 3 (lower is better)
Translates to: PATRPDQRLSPE*EPPNVFSPCPF
Trigger: GAAAGGGCAGGGGGAGAAGACATTGGGTGGTTCCCACTCGGGTGAGAGTCTTTGGTCCGGTCTGGTGGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR CAA 90 bp TTCCCCATACCTGGTGCCCAACAGGTGACTGGTCTCTGCCCTGTGCTGGCCACCCGGAAGAAGAAGAAGTaGGGATCCAGGGGATTGTTC +
Preference number: 3 (lower is better)
Translates to: FPIPGAQQVTGLCPVLATRKKKK*GSRGLF
Trigger: GAACAATCCCCTGGATCCCAACTTCTTCTTCTTCCG...GGTGGCCAGCACAGGGCAGAGACCAGTCACCTGTTGGGCACCAGGTATGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR GCA 72 bp TCCACCATCTTCTGGAGTAGCCCTTTGGCCTGTGCGTaGAAGGGATCTAGGAGCAAGGCGCTTCGAAGGTCC +
Preference number: 3 (lower is better)
Translates to: STIFWSSPLACA*KGSRSKALRRS
Trigger: GGACCTTCGAAGCGCCTTGCTCCTAGATCCCTTGCACGCACAGGCCAAAGGGCTACTCCAGAAGATGGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR GCA 72 bp TTCTCAATGGCACAGTTGATGCACTTCAGTGCACGGTaGACCTTGCCCTGCACGGCCAGGGTGCTGGCATCT +
Preference number: 3 (lower is better)
Translates to: FSMAQLMHFSAR*TLPCTARVLAS
Trigger: AGATGCCAGCACCCTGGCCGTGCAGGGCAAGGTGCACCGTGCACTGAAGTGCATCAACTGTGCCATTGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CCA 72 bp TGCTCCTCTGCTGTCTGGAACTGCCTGTGTTTCTGCTaGCAGAAGCCCAGCTTCTCCTGCAGCACACCCATG +
Preference number: 3 (lower is better)
Translates to: CSSAVWNCLCFC*QKPSFSCSTPM
Trigger: CATGGGTGTGCTGCAGGAGAAGCTGGGCTTCTGCCAGCAGAAACACAGGCAGTTCCAGACAGCAGAGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CCA 72 bp GAACTGTCGGCACTTGGCCCGGTGCAGGTAGTACTGTaGTTTCTGAGGGCTGTGCCTTATGGCCTCCGAGAA +
Preference number: 3 (lower is better)
Translates to: ELSALGPVQVVL*FLRAVPYGLRE
Trigger: TTCTCGGAGGCCATAAGGCACAGCCCTCAGAAACCACAGTACTACCTGCACCGGGCCAAGTGCCGACAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR TCA 72 bp GGGGTTAGAGAGAGAGAGACTGAAGTCTGGGGAGGTTaGGAGACCCTCCTGAGACCACGAAGCAGGTCTGCA +
Preference number: 3 (lower is better)
Translates to: GVRERETEVWGG*ETLLRPRSRSA
Trigger: TGCAGACCTGCTTCGTGGTCTCAGGAGGGTCTCTCAACCTCCCCAGACTTCAGTCTCTCTCTCTCTAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR GCA 72 bp AGGGCTGTGCCTTATGGCCTCCGAGAAGTGCTCCTCTaGTGTCTGGAACTGCCTGTGTTTCTGCTGGCAGAA +
Preference number: 3 (lower is better)
Translates to: RAVPYGLREVLL*CLELPVFLLAE
Trigger: TTCTGCCAGCAGAAACACAGGCAGTTCCAGACAGCAGAGGAGCACTTCTCGGAGGCCATAAGGCACAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CCA 72 bp CACAAAGGCCAGCCGGTTCAGGTACTTGTTATTCCCTaGGTCATAGGAGTAGGCCCTGCGGAGGTTCTGGAG +
Preference number: 3 (lower is better)
Translates to: HKGQPVQVLVIP*VIGVGPAEVLE
Trigger: CTCCAGAACCTCCGCAGGGCCTACTCCTATGACCCAGGGAATAACAAGTACCTGAACCGGCTGGCCTTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CCA 72 bp TCTTGGAGAGACTGCTTGGCCTGGTCCACCATCTTCTaGAGTAGCCCTTTGGCCTGTGCGTGCAAGGGATCT +
Preference number: 3 (lower is better)
Translates to: SWRDCLAWSTIF*SSPLACACKGS
Trigger: AGATCCCTTGCACGCACAGGCCAAAGGGCTACTCCAGAAGATGGTGGACCAGGCCAAGCAGTCTCTCCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR CAA 90 bp ATTTCTACTCTCATGTCCTCCCAACACAAACTACTCAGCAGGCCTGGCTGGAGGGGAGGTCCAGCCCCTTaGTACCCCAGTACCGGAAGA +
Preference number: 3 (lower is better)
Translates to: ISTLMSSQHKLLSRPGWRGGPAP*YPSTGR
Trigger: TCTTCCGGTACTGGGGTACAAAGGGGCTGGACCTCC...CCTCCAGCCAGGCCTGCTGAGTAGTTTGTGTTGGGAGGACATGAGAGTAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR TCA 72 bp CAGGAACAGCAAGGACTTACTGCTAAAGACGGAGCCTaGGGAGGTCTGGTCCGCATAGCTGTCTGTCAGGGA +
Preference number: 3 (lower is better)
Translates to: QEQQGLTAKDGA*GGLVRIAVCQG
Trigger: TCCCTGACAGACAGCTATGCGGACCAGACCTCCTCAGGCTCCGTCTTTAGCAGTAAGTCCTTGCTGTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CCA 72 bp GCAGGTAGTACTGTGGTTTCTGAGGGCTGTGCCTTATaGCCTCCGAGAAGTGCTCCTCTGCTGTCTGGAACT +
Preference number: 3 (lower is better)
Translates to: AGSTVVSEGCAL*PPRSAPLLSGT
Trigger: AGTTCCAGACAGCAGAGGAGCACTTCTCGGAGGCCATAAGGCACAGCCCTCAGAAACCACAGTACTACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CCA 72 bp CCAAGACGTTCCTGCTTCCAGAGCTTCACCAGGACTTaGGCTTTCCTGCGTTCCAATAACCGCTGCACCACA +
Preference number: 3 (lower is better)
Translates to: PRRSCFQSFTRT*AFLRSNNRCTT
Trigger: TGTGGTGCAGCGGTTATTGGAACGCAGGAAAGCCCAAGTCCTGGTGAAGCTCTGGAAGCAGGAACGTCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR TCA 72 bp AGTTGGGATCCAGGGGATTGTTCTCAATGGCACAGTTaGTGCACTTCAGTGCACGGTGCACCTTGCCCTGCA +
Preference number: 3 (lower is better)
Translates to: SWDPGDCSQWHS*CTSVHGAPCPA
Trigger: TGCAGGGCAAGGTGCACCGTGCACTGAAGTGCATCAACTGTGCCATTGAGAACAATCCCCTGGATCCCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR GCA 72 bp TCACCCCCACGGTTGATGTACAAGCCCTTCTCATTCTaGTCGTCTCTGATAGCCTTGTTCAGCAGCAGCACG +
Preference number: 3 (lower is better)
Translates to: SPPRLMYKPFSF*SSLIALFSSST
Trigger: CGTGCTGCTGCTGAACAAGGCTATCAGAGACGAGCAGAATGAGAAGGGCTTGTACATCAACCGTGGGGGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR CAA 90 bp GCACCAAATCCTTGGGGGACCAGATACAATTTCTACTCTCATGTCCTCCCAACACAGGGTGCTGGCATCTaGGAGAGACTGCTTGGCCTG +
Preference number: 3 (lower is better)
Translates to: APNPWGTRYNFYSHVLPTQGAGI*ERLLGL
Trigger: CAGGCCAAGCAGTCTCTCCAAGATGCCAGCACCCTG...TGTTGGGAGGACATGAGAGTAGAAATTGTATCTGGTCCCCCAAGGATTTGGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR CAA 90 bp CAGTGCTCTGAGGGTAGATGTTCTTCGGCCCATTTTCTATCATCCGACTTAGCTTCCGCGAAGGCCAGGTaGCCCAGCTGGAAGAAGCAA +
Preference number: 3 (lower is better)
Translates to: QCSEGRCSSAHFLSSDLASAKAR*PSWKKQ
Trigger: TTGCTTCTTCCAGCTGGGCAACCTGGCCTTCGCGGA...AGCTAAGTCGGATGATAGAAAATGGGCCGAAGAACATCTACCCTCAGAGCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CCA 72 bp ATGTCCTCCCAACACAAACTACTCAGCAGGCCTGGCTaGAGGCCTAAGATTCCCAGGTTACCATGGAAACCA +
Preference number: 3 (lower is better)
Translates to: MSSQHKLLSRPG*RPKIPRLPWKP
Trigger: TGGTTTCCATGGTAACCTGGGAATCTTAGGCCTCCAGCCAGGCCTGCTGAGTAGTTTGTGTTGGGAGGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CCA 72 bp ATCCGACTTAGCTGGAGCTTGGCCAGTTCGGCCACTTaGGACTTAAGCACATTCTCCACAGTCATGCTAGGA +
Preference number: 3 (lower is better)
Translates to: IRLSWSLASSAT*DLSTFSTVMLG
Trigger: TCCTAGCATGACTGTGGAGAATGTGCTTAAGTCCCAAGTGGCCGAACTGGCCAAGCTCCAGCTAAGTCGGAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR CAA 90 bp AGTCACTTCCTCTTCAGGGGTCCCAAGACGTTCCTGCTTCCAGAGCTTCACCAGCCAGGATTAGGGAGATaGAATGGCACCAAATCCTTG +
Preference number: 3 (lower is better)
Translates to: SHFLFRGPKTFLLPELHQPGLGR*NGTKSL
Trigger: CAAGGATTTGGTGCCATTCAATCTCCCTAATCCTGG...CTGGTGAAGCTCTGGAAGCAGGAACGTCTTGGGACCCCTGAAGAGGAAGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR CAA 90 bp TTGATGTACAAGCCCTTCTCATTCTGCTCGTCTCTGATAGCCTTGTTCAGCAGCTCTTGGAGAGACTGCTaGGCCTGGTCCACCATCTTC +
Preference number: 3 (lower is better)
Translates to: LMYKPFSFCSSLIALFSSSWRDC*AWSTIF
Trigger: GAAGATGGTGGACCAGGCCAAGCAGTCTCTCCAAGA...GCTGCTGAACAAGGCTATCAGAGACGAGCAGAATGAGAAGGGCTTGTACATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CCA 72 bp ATGTTCTTCGGCCCATTTTCTATCATCCGACTTAGCTaGAGCTTGGCCAGTTCGGCCACTTGGGACTTAAGC +
Preference number: 3 (lower is better)
Translates to: MFFGPFSIIRLS*SLASSATWDLS
Trigger: GCTTAAGTCCCAAGTGGCCGAACTGGCCAAGCTCCAGCTAAGTCGGATGATAGAAAATGGGCCGAAGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CCA 72 bp GACCAAAGTTTCTTACTGTCCTGGGAGGAGGCAGCTTaGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCA +
Preference number: 3 (lower is better)
Translates to: DQSFLLSWEEAA*LKSVHCSGRAS
Trigger: TGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAGAAACTTTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
3UTR-3UTR CAA 90 bp TTGATGTACAAGCCCTTCTCATTCTGCTCGTCTCTGATAGCCTTGTTCAGCAGCCAGTCACCATGTCCATaGCCTTCAGGAAGTCTTCCA +
Preference number: 3 (lower is better)
Translates to: LMYKPFSFCSSLIALFSSQSPCP*PSGSLP
Trigger: TGGAAGACTTCCTGAAGGCAATGGACATGGTGACTG...GCTGCTGAACAAGGCTATCAGAGACGAGCAGAATGAGAAGGGCTTGTACATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR TCA 72 bp AAAGTTTCTTACTGTCCTGGGAGGAGGCAGCTTGGCTaGAATCTGTTCATTGCTCAGGAAGGGCTTCATTGG +
Preference number: 3 (lower is better)
Translates to: KVSYCPGRRQLG*NLFIAQEGLHW
Trigger: CCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAGAAACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
3UTR GCA 72 bp AGCTCTAAAACCATGGACTGTCTGTTCATTGAGACCTaGCATGTTGGAGCAATAGGCCTTCCCCTAAAGAGC +
Preference number: 3 (lower is better)
Translates to: SSKTMDCLFIET*HVGAIGLPLKS
Trigger: GCTCTTTAGGGGAAGGCCTATTGCTCCAACATGGCAGGTCTCAATGAACAGACAGTCCATGGTTTTAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR TCA 72 bp ATTTGGCTAGAAGGCTACTGTCCACCCTGGACCTTCTaGCCCCATGGCCTTGACTATATTCATAAATTCTGC +
Preference number: 3 (lower is better)
Translates to: IWLEGYCPPWTF*PHGLDYIHKFC
Trigger: GCAGAATTTATGAATATAGTCAAGGCCATGGGGTCAGAAGGTCCAGGGTGGACAGTAGCCTTCTAGCCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR-3UTR CAA 90 bp CAGTGCTCTGAGGGTAGATGTTCTTCGGCCCATTTTCTATCATCCGACTTAGCTATGGGTTTCTGGAAATaGAACTCAATCAAGCTGACA +
Preference number: 3 (lower is better)
Translates to: QCSEGRCSSAHFLSSDLAMGFWK*NSIKLT
Trigger: TGTCAGCTTGATTGAGTTCAATTTCCAGAAACCCAT...AGCTAAGTCGGATGATAGAAAATGGGCCGAAGAACATCTACCCTCAGAGCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CCA 72 bp TTCATGTACTTAGTTTATGGGAATCTTATGGGTTTCTaGAAATTGAACTCAATCAAGCTGACAGATTTGTTC +
Preference number: 3 (lower is better)
Translates to: FMYLVYGNLMGF*KLNSIKLTDLF
Trigger: GAACAAATCTGTCAGCTTGATTGAGTTCAATTTCCAGAAACCCATAAGATTCCCATAAACTAAGTACATGAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
CDS-3UTR TCA 90 bp GCCGGGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGGCCCGACTTGCCGGGTaGGGGGTGGGAGCCGGTGCG +
Preference number: 4 (lower is better)
Translates to: AGSCRQWAWLPRSGAHREARLAG*GVGAGA
Trigger: CGCACCGGCTCCCACCCCTCACCCGGCAAGTCGGGC...CTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCCCGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR GCA 90 bp GCCGGGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGGTGCACGGTGCACCTTaGCCTGCACGGCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: AGSCRQWAWLPRSGAHREVHGAP*PARPGC
Trigger: GCACCCTGGCCGTGCAGGGCAAGGTGCACCGTGCAC...CTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCCCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CCA 90 bp AGGGGAGCCGGGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCCGCCGCCTGGGACGTaGCTTCTCTGCGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: RGAGSCRQWAWLPRSGAHPPPGT*LLCAAP
Trigger: AGGTGCAGCGCAGAGAAGCCACGTCCCAGGCGGCGG...GTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCCCGGCTCCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CCA 90 bp GGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGCTGTCACGGCTACCGGCCCTaGGGCTCGATCCTCGGGCTG +
Preference number: 4 (lower is better)
Translates to: GVVGNGRGCLGAVHTGSCHGYRP*GSILGL
Trigger: CAGCCCGAGGATCGAGCCCCAGGGCCGGTAGCCGTG...ACAGCTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CCA 90 bp AGGGGAGCCGGGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACTCAACCGGATGGCGGTaGCGAGGCACGGCTACCGGC +
Preference number: 4 (lower is better)
Translates to: RGAGSCRQWAWLPRSGAHSTGWR*RGTATG
Trigger: GCCGGTAGCCGTGCCTCGCCACCGCCATCCGGTTGA...GTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCCCGGCTCCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR GCA 90 bp GCCGGGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGGCGCTGGCCCTGCCCTaGTTCACCTCCCTAGTGATG +
Preference number: 4 (lower is better)
Translates to: AGSCRQWAWLPRSGAHREALALP*FTSLVM
Trigger: CATCACTAGGGAGGTGAAGCAGGGCAGGGCCAGCGC...CTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCCCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CCA 90 bp GCCGGGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGGCCAGGTTGCCCAGCTaGAAGAAGCAATCCCCACGG +
Preference number: 4 (lower is better)
Translates to: AGSCRQWAWLPRSGAHREARLPS*KKQSPR
Trigger: CCGTGGGGATTGCTTCTTCCAGCTGGGCAACCTGGC...CTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR TCA 90 bp GGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGCTGTAGTCGTGATACCGCTTaGGGGCCAGCAGGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GVVGNGRGCLGAVHTGSCSRDTA*GPAGRP
Trigger: TGGCCTGCCTGCTGGCCCTCAAGCGGTATCACGACT...ACAGCTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CCA 90 bp GCCGGGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGTGTAGACATCAGCGCTaGCCCTGCCCTGCTTCACCT +
Preference number: 4 (lower is better)
Translates to: AGSCRQWAWLPRSGAHRECRHQR*PCPASP
Trigger: AGGTGAAGCAGGGCAGGGCCAGCGCTGATGTCTACA...CTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CCA 90 bp AGGGGAGCCGGGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACTGCGAATGCGACTTCTaGCCCGACTTGCCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: RGAGSCRQWAWLPRSGAHCECDF*PDLPGE
Trigger: CTCACCCGGCAAGTCGGGCCAGAAGTCGCATTCGCA...GTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCCCGGCTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
3UTR CAA 72 bp GTTGGCTCCTTCATCCAGCGGGCTCAGGGCCAGCGCTaGCTTGTAGTCAGCCTCCGCGAAGGCCAGGTTGCC +
Preference number: 4 (lower is better)
Translates to: VGSFIQRAQGQR*LVVSLREGQVA
Trigger: GGCAACCTGGCCTTCGCGGAGGCTGACTACAAGCAAGCGCTGGCCCTGAGCCCGCTGGATGAAGGAGCCAAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
CDS-3UTR TCA 90 bp GGCTTCCCACAGCCAGACGCCCACCTGGCGGCGTTGAGAGCACAAGGCAGTCCCTGGGAACGGGCACTGTaGGGCTCCTTGCTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: GFPQPDAHLAALRAQGSPWERAL*GSLLLS
Trigger: AGACAGAAGCAAGGAGCCTCACAGTGCCCGTTCCCA...GGGACTGCCTTGTGCTCTCAACGCCGCCAGGTGGGCGTCTGGCTGTGGGAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
CDS-3UTR GCA 90 bp GGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGCTGTCATAGGAGTAGGCCCTaGGGAGGTTCTGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GVVGNGRGCLGAVHTGSCHRSRP*GGSGGQ
Trigger: CTGCCCTCCAGAACCTCCGCAGGGCCTACTCCTATG...ACAGCTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CCA 90 bp AGGGGAGCCGGGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCTGAAGGAAGCGTTTTaGGGCTGGAGGTCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: RGAGSCRQWAWLPRSGAHLKEAF*GWRSEA
Trigger: AGCCTCCGACCTCCAGCCCCAAAACGCTTCCTTCAG...GTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCCCGGCTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CCA 90 bp GGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGCTGTGCACGGCCAGGGTGCTaGCATCTTGGAGAGACTGCT +
Preference number: 4 (lower is better)
Translates to: GVVGNGRGCLGAVHTGSCARPGC*HLGETA
Trigger: AGCAGTCTCTCCAAGATGCCAGCACCCTGGCCGTGC...ACAGCTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CCA 90 bp GCCGGGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGTGCCTGTGTTTCTGCTaGCAGAAGCCCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AGSCRQWAWLPRSGAHRECLCFC*QKPSFS
Trigger: GGAGAAGCTGGGCTTCTGCCAGCAGAAACACAGGCA...CTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CCA 90 bp AGGGGAGCCGGGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACGGAACTGTCGGCACTTaGCCCGGTGCAGGTAGTACT +
Preference number: 4 (lower is better)
Translates to: RGAGSCRQWAWLPRSGAHGTVGT*PGAGST
Trigger: AGTACTACCTGCACCGGGCCAAGTGCCGACAGTTCC...GTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCCCGGCTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
3UTR CAA 72 bp AAGCCCAGCTTCTCCTGCAGCACACCCATGCGCAAGTaGGCTCCTTCATCCAGCGGGCTCAGGGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: KPSFSCSTPMRK*APSSSGLRASA
Trigger: AGCGCTGGCCCTGAGCCCGCTGGATGAAGGAGCCAACTTGCGCATGGGTGTGCTGCAGGAGAAGCTGGGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
CDS-3UTR GCA 90 bp AGGGGAGCCGGGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACGTTGATGCACTTCAGTaGACGGTGCACCTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: RGAGSCRQWAWLPRSGAHVDALQ*TVHLAL
Trigger: CAGGGCAAGGTGCACCGTGCACTGAAGTGCATCAAC...GTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCCCGGCTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR GCA 90 bp GGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGCTGTCCGCGAAGGCCAGGTTaGCCAGCTGGAAGAAGCAAT +
Preference number: 4 (lower is better)
Translates to: GVVGNGRGCLGAVHTGSCPRRPG*PAGRSN
Trigger: ATTGCTTCTTCCAGCTGGGCAACCTGGCCTTCGCGG...ACAGCTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR GCA 90 bp GGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGCTGTGGCTCGTTCTGCGAATaGGACTTCTGGCCCGACTTG +
Preference number: 4 (lower is better)
Translates to: GVVGNGRGCLGAVHTGSCGSFCE*DFWPDL
Trigger: CAAGTCGGGCCAGAAGTCGCATTCGCAGAACGAGCC...ACAGCTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CCA 90 bp GCCGGGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGTGCTCCTCTGCTGTCTaGAACTGCCTGTGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: AGSCRQWAWLPRSGAHRECSSAV*NCLCFC
Trigger: GCAGAAACACAGGCAGTTCCAGACAGCAGAGGAGCA...CTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CCA 90 bp GCCGGGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGGCCAGTTCGGCCACTTaGGACTTAAGCACATTCTCC +
Preference number: 4 (lower is better)
Translates to: AGSCRQWAWLPRSGAHREASSAT*DLSTFS
Trigger: GGAGAATGTGCTTAAGTCCCAAGTGGCCGAACTGGC...CTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR TCA 90 bp GCCGGGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGTCTCAATGGCACAGTTaGTGCACTTCAGTGCACGGT +
Preference number: 4 (lower is better)
Translates to: AGSCRQWAWLPRSGAHRESQWHS*CTSVHG
Trigger: ACCGTGCACTGAAGTGCATCAACTGTGCCATTGAGA...CTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR TCA 90 bp GCCGGGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGGCAGATGGAGTTCTCTaGGTCTTGCTTCTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: AGSCRQWAWLPRSGAHREADGVL*VLLLSV
Trigger: GACAGACAGAAGCAAGACTCAGAGAACTCCATCTGC...CTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR TCA 90 bp GGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGCTGTTGGGAACGGGCACTGTaGGGCTCCTTTAATAACCCC +
Preference number: 4 (lower is better)
Translates to: GVVGNGRGCLGAVHTGSCWERAL*GSFNNP
Trigger: GGGGTTATTAAAGGAGCCTCACAGTGCCCGTTCCCA...ACAGCTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR TCA 90 bp GGCTTCCCACAGCCAGACGCCCACCTGGCGGCGTTGAGAGCACAAGGCAGTCCCTCTCAGGGTACTCTCTaGCTTTGGCAGGCACTGTTG +
Preference number: 4 (lower is better)
Translates to: GFPQPDAHLAALRAQGSPSQGTL*LWQALL
Trigger: CAACAGTGCCTGCCAAAGTCAGAGAGTACCCTGAGA...GGGACTGCCTTGTGCTCTCAACGCCGCCAGGTGGGCGTCTGGCTGTGGGAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
CDS-3UTR GCA 90 bp GGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGCTGTGCCGTCTACGCAAGGTaGCCCGGAAGAAGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: GVVGNGRGCLGAVHTGSCAVYAR*PGRRRS
Trigger: ACTTCTTCTTCTTCCGGGGCACCTTGCGTAGACGGC...ACAGCTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR GCA 90 bp GGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGCTGTCGAGAAGTGCTCCTCTaGTGTCTGGAACTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: GVVGNGRGCLGAVHTGSCREVLL*CLELPV
Trigger: CACAGGCAGTTCCAGACAGCAGAGGAGCACTTCTCG...ACAGCTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR GCA 90 bp GGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGCTGTTCTGCTGTCTGGAACTaGCTGTGTTTCTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GVVGNGRGCLGAVHTGSCSAVWN*LCFCWQ
Trigger: CTGCCAGCAGAAACACAGGCAGTTCCAGACAGCAGA...ACAGCTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CCA 90 bp GGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGCTGTGAGAAGTCACAGAGTTaGATGAAGGCCTCAGCACGG +
Preference number: 4 (lower is better)
Translates to: GVVGNGRGCLGAVHTGSCEKSQS*MKASAR
Trigger: CCGTGCTGAGGCCTTCATCCAACTCTGTGACTTCTC...ACAGCTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CCA 90 bp AGGGGAGCCGGGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACACACAGAGGGCTTCCTaGAAGTCACACAGCTCATAC +
Preference number: 4 (lower is better)
Translates to: RGAGSCRQWAWLPRSGAHTQRAS*KSHSSY
Trigger: GTATGAGCTGTGTGACTTCCAGGAAGCCCTCTGTGT...GTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCCCGGCTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CCA 90 bp GGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGCTGTAGAGACTGCTTGGCCTaGTCCACCATCTTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: GVVGNGRGCLGAVHTGSCRDCLA*STIFWS
Trigger: ACTCCAGAAGATGGTGGACCAGGCCAAGCAGTCTCT...ACAGCTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CCA 90 bp GGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGCTGTCTTGGAGAGACTGCTTaGCCTGGTCCACCATCTTCT +
Preference number: 4 (lower is better)
Translates to: GVVGNGRGCLGAVHTGSCLGETA*PGPPSS
Trigger: AGAAGATGGTGGACCAGGCCAAGCAGTCTCTCCAAG...ACAGCTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR TCA 90 bp GGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGCTGTAGTCACAGAGTTGGATaGAGGCCTCAGCACGGAATA +
Preference number: 4 (lower is better)
Translates to: GVVGNGRGCLGAVHTGSCSHRVG*RPQHGI
Trigger: TATTCCGTGCTGAGGCCTTCATCCAACTCTGTGACT...ACAGCTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CCA 90 bp AGGGGAGCCGGGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCCTGATAGCAGAGCTTaGCCTTCTGGAAGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: RGAGSCRQWAWLPRSGAHPDSRA*PSGRSC
Trigger: ACAACTTCTTCCAGAAGGCCAAGCTCTGCTATCAGG...GTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCCCGGCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CCA 90 bp GCCGGGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGGGAAGAAGAAGAAGTTaGGATCCAGGGGATTGTTCT +
Preference number: 4 (lower is better)
Translates to: AGSCRQWAWLPRSGAHREGRRRS*DPGDCS
Trigger: AGAACAATCCCCTGGATCCCAACTTCTTCTTCTTCC...CTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CCA 90 bp GGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGCTGTTTCACTAGGTTGTCCTaGGTGTCAGTCACCATGTCC +
Preference number: 4 (lower is better)
Translates to: GVVGNGRGCLGAVHTGSCFTRLS*VSVTMS
Trigger: GGACATGGTGACTGACACCCAGGACAACCTAGTGAA...ACAGCTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
3UTR CAA 72 bp TGCTTGGCCTGGTCCACCATCTTCTGGAGTAGCCCTTaGGCCTGTGCGTGCAAGGGATCTAGGAGCAAGGCG +
Preference number: 4 (lower is better)
Translates to: CLAWSTIFWSSP*ACACKGSRSKA
Trigger: CGCCTTGCTCCTAGATCCCTTGCACGCACAGGCCAAAGGGCTACTCCAGAAGATGGTGGACCAGGCCAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CAA 72 bp ATGGCACAGTTGATGCACTTCAGTGCACGGTGCACCTaGCCCTGCACGGCCAGGGTGCTGGCATCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: MAQLMHFSARCT*PCTARVLASWR
Trigger: TCTCCAAGATGCCAGCACCCTGGCCGTGCAGGGCAAGGTGCACCGTGCACTGAAGTGCATCAACTGTGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
CDS-3UTR TCA 90 bp GGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGCTGTGGTTATAGTACTCTCTaGCTTTGGCAGGCACTGTTG +
Preference number: 4 (lower is better)
Translates to: GVVGNGRGCLGAVHTGSCGYSTL*LWQALL
Trigger: CAACAGTGCCTGCCAAAGTCAGAGAGTACTATAACC...ACAGCTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR GCA 90 bp CTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTGCGCTGGCCCTGCCCTaGTTCACCTCCCTAGTGATG +
Preference number: 4 (lower is better)
Translates to: LSWEEAAWLKSVHCSGRAALALP*FTSLVM
Trigger: CATCACTAGGGAGGTGAAGCAGGGCAGGGCCAGCGC...AGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp GAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTGTGCACGGTGCACCTTaGCCTGCACGGCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: EAAWLKSVHCSGRASLALVHGAP*PARPGC
Trigger: GCACCCTGGCCGTGCAGGGCAAGGTGCACCGTGCAC...AAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp CTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGTGCACGGTGCACCTTaGCCTGCACGGCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: LGGGSLAEICSLLRKGFIVHGAP*PARPGC
Trigger: GCACCCTGGCCGTGCAGGGCAAGGTGCACCGTGCAC...AATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp GGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGCTGTAGTCACCATGTCCATTaGCTTCAGGAAGTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: GVVGNGRGCLGAVHTGSCSHHVH*LQEVFH
Trigger: GTGGAAGACTTCCTGAAGGCAATGGACATGGTGACT...ACAGCTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR GCA 90 bp GGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGCTGTAAGCCCTTCTCATTCTaGTCGTCTCTGATAGCCTTG +
Preference number: 4 (lower is better)
Translates to: GVVGNGRGCLGAVHTGSCKPFSF*SSLIAL
Trigger: CAAGGCTATCAGAGACGAGCAGAATGAGAAGGGCTT...ACAGCTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CCA 90 bp GGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGCTGTAAGTCTTCCACAGCATaGTCAAATTGCTGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: GVVGNGRGCLGAVHTGSCKSSTA*SNCWSR
Trigger: ACGGCTCCAGCAATTTGACCATGCTGTGGAAGACTT...ACAGCTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR TCA 90 bp TCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCAAGTCGTGATACCGCTTaGGGGCCAGCAGGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SWEEAAWLKSVHCSGRASSRDTA*GPAGRP
Trigger: TGGCCTGCCTGCTGGCCCTCAAGCGGTATCACGACT...TGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR TCA 90 bp GAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCAGTCGTGATACCGCTTaGGGGCCAGCAGGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: EEAAWLKSVHCSGRASLASRDTA*GPAGRP
Trigger: TGGCCTGCCTGCTGGCCCTCAAGCGGTATCACGACT...GGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp GTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCCATAGGAGTAGGCCCTaGGGAGGTTCTGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: VLGGGSLAEICSLLRKGFHRSRP*GGSGGQ
Trigger: CTGCCCTCCAGAACCTCCGCAGGGCCTACTCCTATG...GAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp GAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCGCGCTGGCCCTGCCCTaGTTCACCTCCCTAGTGATG +
Preference number: 4 (lower is better)
Translates to: EEAAWLKSVHCSGRASLAALALP*FTSLVM
Trigger: CATCACTAGGGAGGTGAAGCAGGGCAGGGCCAGCGC...GGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCGCACGGCCAGGGTGCTaGCATCTTGGAGAGACTGCT +
Preference number: 4 (lower is better)
Translates to: VLGGGSLAEICSLLRKGFARPGC*HLGETA
Trigger: AGCAGTCTCTCCAAGATGCCAGCACCCTGGCCGTGC...GAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp ACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCGCACGGCCAGGGTGCTaGCATCTTGGAGAGACTGCT +
Preference number: 4 (lower is better)
Translates to: TVLGGGSLAEICSLLRKGARPGC*HLGETA
Trigger: AGCAGTCTCTCCAAGATGCCAGCACCCTGGCCGTGC...GCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp ACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCGCCAGGTTGCCCAGCTaGAAGAAGCAATCCCCACGG +
Preference number: 4 (lower is better)
Translates to: TVLGGGSLAEICSLLRKGARLPS*KKQSPR
Trigger: CCGTGGGGATTGCTTCTTCCAGCTGGGCAACCTGGC...GCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCCTGCCTGGACGACCTTaGGGCTCCAGGTCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: VLGGGSLAEICSLLRKGFLPGRP*GSRSVP
Trigger: AGGAACTGACCTGGAGCCCCAAGGTCGTCCAGGCAG...GAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTAGCCTTGCTGGGCCATaGAGTCTGGCCCGGGGTATC +
Preference number: 4 (lower is better)
Translates to: GGSLAEICSLLRKGFIGPSLAGP*SLARGI
Trigger: GATACCCCGGGCCAGACTCCATGGCCCAGCAAGGCT...AGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
3UTR CAA 72 bp CAGGCAGGCCATGCATCGGTAACTGAAGGAAGCGTTTaGGGGCTGGAGGTCGGAGGCTTGCAGGAAGACACA +
Preference number: 4 (lower is better)
Translates to: QAGHASVTEGSV*GLEVGGLQEDT
Trigger: TGTGTCTTCCTGCAAGCCTCCGACCTCCAGCCCCAAAACGCTTCCTTCAGTTACCGATGCATGGCCTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CAA 72 bp CACCATCCCACTAGGTCCCCACCACATCCCTTGGGGTaGGGACAAAGCTGTCCAGGGCAGAACCTTAGGACA +
Preference number: 4 (lower is better)
Translates to: HHPTRSPPHPLG*GQSCPGQNLRT
Trigger: TGTCCTAAGGTTCTGCCCTGGACAGCTTTGTCCCAACCCCAAGGGATGTGGTGGGGACCTAGTGGGATGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
CDS-3UTR GCA 90 bp TCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCACATAGGAGTAGGCCCTaGGGAGGTTCTGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SWEEAAWLKSVHCSGRASHRSRP*GGSGGQ
Trigger: CTGCCCTCCAGAACCTCCGCAGGGCCTACTCCTATG...TGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp GGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTCATAGGAGTAGGCCCTaGGGAGGTTCTGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GGSLAEICSLLRKGFIGPHRSRP*GGSGGQ
Trigger: CTGCCCTCCAGAACCTCCGCAGGGCCTACTCCTATG...AGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp GGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGGCGCTGGCCCTGCCCTaGTTCACCTCCCTAGTGATG +
Preference number: 4 (lower is better)
Translates to: GSLAEICSLLRKGFIGPLALALP*FTSLVM
Trigger: CATCACTAGGGAGGTGAAGCAGGGCAGGGCCAGCGC...CAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp ACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCCCGCGAAGGCCAGGTTaGCCAGCTGGAAGAAGCAAT +
Preference number: 4 (lower is better)
Translates to: TVLGGGSLAEICSLLRKGPRRPG*PAGRSN
Trigger: ATTGCTTCTTCCAGCTGGGCAACCTGGCCTTCGCGG...GCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp CTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTAGCTATCAGCAGCCTTaGTGGGCCATGGAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: LSWEEAAWLKSVHCSGRASYQQP*WAMESG
Trigger: GCCAGACTCCATGGCCCAGCAAGGCTGCTGATAGCT...AGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp ACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCCTGAAGGAAGCGTTTTaGGGCTGGAGGTCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: TVLGGGSLAEICSLLRKGLKEAF*GWRSEA
Trigger: AGCCTCCGACCTCCAGCCCCAAAACGCTTCCTTCAG...GCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp CTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTGTAGACATCAGCGCTaGCCCTGCCCTGCTTCACCT +
Preference number: 4 (lower is better)
Translates to: LSWEEAAWLKSVHCSGRACRHQR*PCPASP
Trigger: AGGTGAAGCAGGGCAGGGCCAGCGCTGATGTCTACA...AGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTGCCAGGTTGCCCAGCTaGAAGAAGCAATCCCCACGG +
Preference number: 4 (lower is better)
Translates to: GGSLAEICSLLRKGFIGPARLPS*KKQSPR
Trigger: CCGTGGGGATTGCTTCTTCCAGCTGGGCAACCTGGC...AGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCGGAACTGTCGGCACTTaGCCCGGTGCAGGTAGTACT +
Preference number: 4 (lower is better)
Translates to: VLGGGSLAEICSLLRKGFGTVGT*PGAGST
Trigger: AGTACTACCTGCACCGGGCCAAGTGCCGACAGTTCC...GAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp TCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCACTGCCTGGACGACCTTaGGGCTCCAGGTCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: SWEEAAWLKSVHCSGRASLPGRP*GSRSVP
Trigger: AGGAACTGACCTGGAGCCCCAAGGTCGTCCAGGCAG...TGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGCCTTGCTGGGCCATaGAGTCTGGCCCGGGGTATC +
Preference number: 4 (lower is better)
Translates to: GSLAEICSLLRKGFIGPLSLAGP*SLARGI
Trigger: GATACCCCGGGCCAGACTCCATGGCCCAGCAAGGCT...CAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTAGCCTTGCTGGGCCATaGAGTCTGGCCCGGGGTATC +
Preference number: 4 (lower is better)
Translates to: EAAWLKSVHCSGRASLALSLAGP*SLARGI
Trigger: GATACCCCGGGCCAGACTCCATGGCCCAGCAAGGCT...AAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCTATCAGCAGCCTTGCTaGGCCATGGAGTCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: EEAAWLKSVHCSGRASLAYQQPC*AMESGP
Trigger: CGGGCCAGACTCCATGGCCCAGCAAGGCTGCTGATA...GGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp TCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATATCAGCAGCCTTGCTaGGCCATGGAGTCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: SWEEAAWLKSVHCSGRASYQQPC*AMESGP
Trigger: CGGGCCAGACTCCATGGCCCAGCAAGGCTGCTGATA...TGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
3UTR CAA 72 bp ACTGAAGGAAGCGTTTTGGGGCTGGAGGTCGGAGGCTaGCAGGAAGACACAGAGGGCTTCCTGGAAGTCACA +
Preference number: 4 (lower is better)
Translates to: TEGSVLGLEVGG*QEDTEGFLEVT
Trigger: TGTGACTTCCAGGAAGCCCTCTGTGTCTTCCTGCAAGCCTCCGACCTCCAGCCCCAAAACGCTTCCTTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
CDS-3UTR TCA 90 bp ACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCATACTCCTGACTGGTTaGCATCTCTGGCCCCGACGT +
Preference number: 4 (lower is better)
Translates to: TVLGGGSLAEICSLLRKGILLTG*HLWPRR
Trigger: ACGTCGGGGCCAGAGATGTCAACCAGTCAGGAGTAT...GCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp AGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGGCGCTGGCCCTGCCCTaGTTCACCTCCCTAGTGATG +
Preference number: 4 (lower is better)
Translates to: SLAEICSLLRKGFIGPLRALALP*FTSLVM
Trigger: CATCACTAGGGAGGTGAAGCAGGGCAGGGCCAGCGC...CCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp ACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCGTTGATGCACTTCAGTaGACGGTGCACCTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: TVLGGGSLAEICSLLRKGVDALQ*TVHLAL
Trigger: CAGGGCAAGGTGCACCGTGCACTGAAGTGCATCAAC...GCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp GTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCGCCGTCTACGCAAGGTaGCCCGGAAGAAGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: VLGGGSLAEICSLLRKGFAVYAR*PGRRRS
Trigger: ACTTCTTCTTCTTCCGGGGCACCTTGCGTAGACGGC...GAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp ACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCGCCGTCTACGCAAGGTaGCCCGGAAGAAGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: TVLGGGSLAEICSLLRKGAVYAR*PGRRRS
Trigger: ACTTCTTCTTCTTCCGGGGCACCTTGCGTAGACGGC...GCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp CTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTCGAGAAGTGCTCCTCTaGTGTCTGGAACTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: LSWEEAAWLKSVHCSGRAREVLL*CLELPV
Trigger: CACAGGCAGTTCCAGACAGCAGAGGAGCACTTCTCG...AGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp ACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCCGAGAAGTGCTCCTCTaGTGTCTGGAACTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: TVLGGGSLAEICSLLRKGREVLL*CLELPV
Trigger: CACAGGCAGTTCCAGACAGCAGAGGAGCACTTCTCG...GCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp GGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTAGCTATCAGCAGCCTTaGTGGGCCATGGAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: GGSLAEICSLLRKGFIGPSYQQP*WAMESG
Trigger: GCCAGACTCCATGGCCCAGCAAGGCTGCTGATAGCT...AGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTCTGAAGGAAGCGTTTTaGGGCTGGAGGTCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GGSLAEICSLLRKGFIGPLKEAF*GWRSEA
Trigger: AGCCTCCGACCTCCAGCCCCAAAACGCTTCCTTCAG...AGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTGTAGACATCAGCGCTaGCCCTGCCCTGCTTCACCT +
Preference number: 4 (lower is better)
Translates to: GGSLAEICSLLRKGFIGPCRHQR*PCPASP
Trigger: AGGTGAAGCAGGGCAGGGCCAGCGCTGATGTCTACA...AGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTGCACGGCCAGGGTGCTaGCATCTTGGAGAGACTGCT +
Preference number: 4 (lower is better)
Translates to: EAAWLKSVHCSGRASLALARPGC*HLGETA
Trigger: AGCAGTCTCTCCAAGATGCCAGCACCCTGGCCGTGC...AAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp CTTACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGCACGGCCAGGGTGCTaGCATCTTGGAGAGACTGCT +
Preference number: 4 (lower is better)
Translates to: LTVLGGGSLAEICSLLRKARPGC*HLGETA
Trigger: AGCAGTCTCTCCAAGATGCCAGCACCCTGGCCGTGC...CTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
CDS-3UTR CCA 90 bp GTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCCTCCAGGTCAGTTCCTaGCTCTTCCTGGGTACTGAG +
Preference number: 4 (lower is better)
Translates to: VLGGGSLAEICSLLRKGFLQVSS*LFLGTE
Trigger: CTCAGTACCCAGGAAGAGCCAGGAACTGACCTGGAG...GAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp CTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTCTCCAGGTCAGTTCCTaGCTCTTCCTGGGTACTGAG +
Preference number: 4 (lower is better)
Translates to: LSWEEAAWLKSVHCSGRALQVSS*LFLGTE
Trigger: CTCAGTACCCAGGAAGAGCCAGGAACTGACCTGGAG...AGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp CTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGACTTGCTAGGCCTTaGGCCCTCAGGGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LGGGSLAEICSLLRKGFIGLARP*ALRGFC
Trigger: ACAGAAGCCCCTGAGGGCCCAAGGCCTAGCAAGTCC...AATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGGGACTTGCTAGGCCTTaGGCCCTCAGGGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: GSLAEICSLLRKGFIGPLGLARP*ALRGFC
Trigger: ACAGAAGCCCCTGAGGGCCCAAGGCCTAGCAAGTCC...CAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
3UTR CAA 72 bp GTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATaGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: VLGGGSLAEICS*LRKGFIGPLRE
Trigger: CTCCCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR TCA 90 bp AGTTTCTTACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAAGTCGTGATACCGCTTaGGGGCCAGCAGGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SFLLSWEEAAWLKSVHCSSRDTA*GPAGRP
Trigger: TGGCCTGCCTGCTGGCCCTCAAGCGGTATCACGACT...TGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
CDS-3UTR TCA 90 bp TCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCAATACTCCTGACTGGTTaGCATCTCTGGCCCCGACGT +
Preference number: 4 (lower is better)
Translates to: SWEEAAWLKSVHCSGRASILLTG*HLWPRR
Trigger: ACGTCGGGGCCAGAGATGTCAACCAGTCAGGAGTAT...TGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR TCA 90 bp GGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTCTGGGTACTGAGAGCTaGGGCTTTAGCAGTGTGGAC +
Preference number: 4 (lower is better)
Translates to: GGSLAEICSLLRKGFIGPLGTES*GFSSVD
Trigger: GTCCACACTGCTAAAGCCTCAGCTCTCAGTACCCAG...AGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR TCA 90 bp GGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTGGATTAGGTTCTCTGTaGCTGCCTGGACGACCTTGG +
Preference number: 4 (lower is better)
Translates to: GGSLAEICSLLRKGFIGPGLGSL*LPGRPW
Trigger: CCAAGGTCGTCCAGGCAGTCACAGAGAACCTAATCC...AGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR TCA 90 bp GGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTGGGAACGGGCACTGTaGGGCTCCTTTAATAACCCC +
Preference number: 4 (lower is better)
Translates to: GGSLAEICSLLRKGFIGPWERAL*GSFNNP
Trigger: GGGGTTATTAAAGGAGCCTCACAGTGCCCGTTCCCA...AGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161430.8
CDS-3UTR GCA 90 bp GGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCGTTGATGCACTTCAGTaGACGGTGCACCTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: GGGSLAEICSLLRKGFIGVDALQ*TVHLAL
Trigger: CAGGGCAAGGTGCACCGTGCACTGAAGTGCATCAAC...GCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp GAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCGCCGTCTACGCAAGGTaGCCCGGAAGAAGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: EEAAWLKSVHCSGRASLAAVYAR*PGRRRS
Trigger: ACTTCTTCTTCTTCCGGGGCACCTTGCGTAGACGGC...GGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp GGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTGCCGTCTACGCAAGGTaGCCCGGAAGAAGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: GGSLAEICSLLRKGFIGPAVYAR*PGRRRS
Trigger: ACTTCTTCTTCTTCCGGGGCACCTTGCGTAGACGGC...AGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp GGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGCCGCGAAGGCCAGGTTaGCCAGCTGGAAGAAGCAAT +
Preference number: 4 (lower is better)
Translates to: GSLAEICSLLRKGFIGPLPRRPG*PAGRSN
Trigger: ATTGCTTCTTCCAGCTGGGCAACCTGGCCTTCGCGG...CAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp TGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGAGCTATCAGCAGCCTTaGTGGGCCATGGAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: WEEAAWLKSVHCSGRASLSYQQP*WAMESG
Trigger: GCCAGACTCCATGGCCCAGCAAGGCTGCTGATAGCT...CAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp CTTACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGAGCTATCAGCAGCCTTaGTGGGCCATGGAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: LTVLGGGSLAEICSLLRKSYQQP*WAMESG
Trigger: GCCAGACTCCATGGCCCAGCAAGGCTGCTGATAGCT...CTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
CDS-3UTR CCA 90 bp ACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCGAGAAGTCACAGAGTTaGATGAAGGCCTCAGCACGG +
Preference number: 4 (lower is better)
Translates to: TVLGGGSLAEICSLLRKGEKSQS*MKASAR
Trigger: CCGTGCTGAGGCCTTCATCCAACTCTGTGACTTCTC...GCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGCTGAAGGAAGCGTTTTaGGGCTGGAGGTCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GSLAEICSLLRKGFIGPLLKEAF*GWRSEA
Trigger: AGCCTCCGACCTCCAGCCCCAAAACGCTTCCTTCAG...CAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp TGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGTGTAGACATCAGCGCTaGCCCTGCCCTGCTTCACCT +
Preference number: 4 (lower is better)
Translates to: WEEAAWLKSVHCSGRASLCRHQR*PCPASP
Trigger: AGGTGAAGCAGGGCAGGGCCAGCGCTGATGTCTACA...CAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp ACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCAGAGACTGCTTGGCCTaGTCCACCATCTTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: TVLGGGSLAEICSLLRKGRDCLA*STIFWS
Trigger: ACTCCAGAAGATGGTGGACCAGGCCAAGCAGTCTCT...GCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp AGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGGCCAGGTTGCCCAGCTaGAAGAAGCAATCCCCACGG +
Preference number: 4 (lower is better)
Translates to: SLAEICSLLRKGFIGPLRARLPS*KKQSPR
Trigger: CCGTGGGGATTGCTTCTTCCAGCTGGGCAACCTGGC...CCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp ACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCGCCAGTTCGGCCACTTaGGACTTAAGCACATTCTCC +
Preference number: 4 (lower is better)
Translates to: TVLGGGSLAEICSLLRKGASSAT*DLSTFS
Trigger: GGAGAATGTGCTTAAGTCCCAAGTGGCCGAACTGGC...GCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp CTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTTGGGCTTTGGGACTTaGGTGGCCTTTTTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: LSWEEAAWLKSVHCSGRALGFGT*VAFLES
Trigger: GGACTCCAAAAAGGCCACCCAAGTCCCAAAGCCCAA...AGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp ACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTGGGCTTTGGGACTTaGGTGGCCTTTTTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: TVLGGGSLAEICSLLRKGLGFGT*VAFLES
Trigger: GGACTCCAAAAAGGCCACCCAAGTCCCAAAGCCCAA...GCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp CTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTGATCCTCTGTCTTCTTaGGCTTTGGGACTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LSWEEAAWLKSVHCSGRADPLSS*ALGLGW
Trigger: CCACCCAAGTCCCAAAGCCCAAGAAGACAGAGGATC...AGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp AGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGGGACTTGCTAGGCCTTaGGCCCTCAGGGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: SLAEICSLLRKGFIGPLRGLARP*ALRGFC
Trigger: ACAGAAGCCCCTGAGGGCCCAAGGCCTAGCAAGTCC...CCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp AGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGTATCAGCAGCCTTGCTaGGCCATGGAGTCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: SLAEICSLLRKGFIGPLRYQQPC*AMESGP
Trigger: CGGGCCAGACTCCATGGCCCAGCAAGGCTGCTGATA...CCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR TCA 90 bp ACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCAGTCACAGAGTTGGATaGAGGCCTCAGCACGGAATA +
Preference number: 4 (lower is better)
Translates to: TVLGGGSLAEICSLLRKGSHRVG*RPQHGI
Trigger: TATTCCGTGCTGAGGCCTTCATCCAACTCTGTGACT...GCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR TCA 90 bp GTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCTCTCAATGGCACAGTTaGTGCACTTCAGTGCACGGT +
Preference number: 4 (lower is better)
Translates to: VLGGGSLAEICSLLRKGFSQWHS*CTSVHG
Trigger: ACCGTGCACTGAAGTGCATCAACTGTGCCATTGAGA...GAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR TCA 90 bp GGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGATACTCCTGACTGGTTaGCATCTCTGGCCCCGACGT +
Preference number: 4 (lower is better)
Translates to: GSLAEICSLLRKGFIGPLILLTG*HLWPRR
Trigger: ACGTCGGGGCCAGAGATGTCAACCAGTCAGGAGTAT...CAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR TCA 90 bp CTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTCTGGGTACTGAGAGCTaGGGCTTTAGCAGTGTGGAC +
Preference number: 4 (lower is better)
Translates to: LGGGSLAEICSLLRKGFILGTES*GFSSVD
Trigger: GTCCACACTGCTAAAGCCTCAGCTCTCAGTACCCAG...AATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR TCA 90 bp GGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGGGATTAGGTTCTCTGTaGCTGCCTGGACGACCTTGG +
Preference number: 4 (lower is better)
Translates to: GSLAEICSLLRKGFIGPLGLGSL*LPGRPW
Trigger: CCAAGGTCGTCCAGGCAGTCACAGAGAACCTAATCC...CAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp AGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGCCGCGAAGGCCAGGTTaGCCAGCTGGAAGAAGCAAT +
Preference number: 4 (lower is better)
Translates to: SLAEICSLLRKGFIGPLRPRRPG*PAGRSN
Trigger: ATTGCTTCTTCCAGCTGGGCAACCTGGCCTTCGCGG...CCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp GGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTCTGCTGTCTGGAACTaGCTGTGTTTCTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GGSLAEICSLLRKGFIGPSAVWN*LCFCWQ
Trigger: CTGCCAGCAGAAACACAGGCAGTTCCAGACAGCAGA...AGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp GGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGCGAGAAGTGCTCCTCTaGTGTCTGGAACTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: GSLAEICSLLRKGFIGPLREVLL*CLELPV
Trigger: CACAGGCAGTTCCAGACAGCAGAGGAGCACTTCTCG...CAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCGAGAAGTCACAGAGTTaGATGAAGGCCTCAGCACGG +
Preference number: 4 (lower is better)
Translates to: EEAAWLKSVHCSGRASLAEKSQS*MKASAR
Trigger: CCGTGCTGAGGCCTTCATCCAACTCTGTGACTTCTC...GGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCGAGAAGTCACAGAGTTaGATGAAGGCCTCAGCACGG +
Preference number: 4 (lower is better)
Translates to: GGGSLAEICSLLRKGFIGEKSQS*MKASAR
Trigger: CCGTGCTGAGGCCTTCATCCAACTCTGTGACTTCTC...GCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp TTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGGAGCTGAAGGAAGCGTTTTaGGGCTGGAGGTCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LAEICSLLRKGFIGPLRELKEAF*GWRSEA
Trigger: AGCCTCCGACCTCCAGCCCCAAAACGCTTCCTTCAG...CTCCCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp TTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGGAGTGTAGACATCAGCGCTaGCCCTGCCCTGCTTCACCT +
Preference number: 4 (lower is better)
Translates to: LAEICSLLRKGFIGPLRECRHQR*PCPASP
Trigger: AGGTGAAGCAGGGCAGGGCCAGCGCTGATGTCTACA...CTCCCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCAGAGACTGCTTGGCCTaGTCCACCATCTTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: EEAAWLKSVHCSGRASLARDCLA*STIFWS
Trigger: ACTCCAGAAGATGGTGGACCAGGCCAAGCAGTCTCT...GGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTGGAGAGACTGCTTaGCCTGGTCCACCATCTTCT +
Preference number: 4 (lower is better)
Translates to: EEAAWLKSVHCSGRASLALGETA*PGPPSS
Trigger: AGAAGATGGTGGACCAGGCCAAGCAGTCTCTCCAAG...GGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTCTTGGAGAGACTGCTTaGCCTGGTCCACCATCTTCT +
Preference number: 4 (lower is better)
Translates to: GGSLAEICSLLRKGFIGPLGETA*PGPPSS
Trigger: AGAAGATGGTGGACCAGGCCAAGCAGTCTCTCCAAG...AGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGTGCCTGTGTTTCTGCTaGCAGAAGCCCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GSLAEICSLLRKGFIGPLCLCFC*QKPSFS
Trigger: GGAGAAGCTGGGCTTCTGCCAGCAGAAACACAGGCA...CAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGCCTGTGTTTCTGCTaGCAGAAGCCCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: EAAWLKSVHCSGRASLALCLCFC*QKPSFS
Trigger: GGAGAAGCTGGGCTTCTGCCAGCAGAAACACAGGCA...AAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTGCTCCTCTGCTGTCTaGAACTGCCTGTGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: GGSLAEICSLLRKGFIGPCSSAV*NCLCFC
Trigger: GCAGAAACACAGGCAGTTCCAGACAGCAGAGGAGCA...AGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCTGCTCCTCTGCTGTCTaGAACTGCCTGTGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: EEAAWLKSVHCSGRASLACSSAV*NCLCFC
Trigger: GCAGAAACACAGGCAGTTCCAGACAGCAGAGGAGCA...GGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCTGCTCCTCTGCTGTCTaGAACTGCCTGTGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: GGGSLAEICSLLRKGFIGCSSAV*NCLCFC
Trigger: GCAGAAACACAGGCAGTTCCAGACAGCAGAGGAGCA...GCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp TTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGGAGGGAACTGTCGGCACTTaGCCCGGTGCAGGTAGTACT +
Preference number: 4 (lower is better)
Translates to: LAEICSLLRKGFIGPLREGTVGT*PGAGST
Trigger: AGTACTACCTGCACCGGGCCAAGTGCCGACAGTTCC...CTCCCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp AGTTTCTTACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCACTGCCTGGACGACCTTaGGGCTCCAGGTCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: SFLLSWEEAAWLKSVHCSLPGRP*GSRSVP
Trigger: AGGAACTGACCTGGAGCCCCAAGGTCGTCCAGGCAG...TGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAGAAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
CDS-3UTR CCA 90 bp GGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGGGCTTTGGGACTTaGGTGGCCTTTTTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: GGSLAEICSLLRKGFIGPLGFGT*VAFLES
Trigger: GGACTCCAAAAAGGCCACCCAAGTCCCAAAGCCCAA...AGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCGATCCTCTGTCTTCTTaGGCTTTGGGACTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: EEAAWLKSVHCSGRASLADPLSS*ALGLGW
Trigger: CCACCCAAGTCCCAAAGCCCAAGAAGACAGAGGATC...GGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTGTCTTTGTTACTTTCTaGCTGCTGCGCTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: GGSLAEICSLLRKGFIGPVFVTF*LLRWAL
Trigger: CAAGGCCCAGCGCAGCAGCCAGAAAGTAACAAAGAC...AGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp ACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCCTTCTCTCTGTCTCCTaGGATCTGTTGGACTTCCTG +
Preference number: 4 (lower is better)
Translates to: TVLGGGSLAEICSLLRKGLLSVS*DLLDFL
Trigger: CAGGAAGTCCAACAGATCCCAGGAGACAGAGAGAAG...GCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
3UTR CAA 72 bp GCTGTCCAGGGCAGAACCTTAGGACATGCTCAGTACTaGGCTTCTCTGTTGCTTTCTGCTAGGCTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: AVQGRTLGHAQY*ASLLLSARLSR
Trigger: CCTGCTAAGCCTAGCAGAAAGCAACAGAGAAGCCAAGTACTGAGCATGTCCTAAGGTTCTGCCCTGGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
CDS-3UTR TCA 90 bp ACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCGGTTATAGTACTCTCTaGCTTTGGCAGGCACTGTTG +
Preference number: 4 (lower is better)
Translates to: TVLGGGSLAEICSLLRKGGYSTL*LWQALL
Trigger: CAACAGTGCCTGCCAAAGTCAGAGAGTACTATAACC...GCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR TCA 90 bp CTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTGGTTATAGTACTCTCTaGCTTTGGCAGGCACTGTTG +
Preference number: 4 (lower is better)
Translates to: LSWEEAAWLKSVHCSGRAGYSTL*LWQALL
Trigger: CAACAGTGCCTGCCAAAGTCAGAGAGTACTATAACC...AGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR TCA 90 bp GAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCTCTCAATGGCACAGTTaGTGCACTTCAGTGCACGGT +
Preference number: 4 (lower is better)
Translates to: EEAAWLKSVHCSGRASLASQWHS*CTSVHG
Trigger: ACCGTGCACTGAAGTGCATCAACTGTGCCATTGAGA...GGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR TCA 90 bp TTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGGAGCTGGGTACTGAGAGCTaGGGCTTTAGCAGTGTGGAC +
Preference number: 4 (lower is better)
Translates to: LAEICSLLRKGFIGPLRELGTES*GFSSVD
Trigger: GTCCACACTGCTAAAGCCTCAGCTCTCAGTACCCAG...CTCCCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR TCA 90 bp AGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGGGATTAGGTTCTCTGTaGCTGCCTGGACGACCTTGG +
Preference number: 4 (lower is better)
Translates to: SLAEICSLLRKGFIGPLRGLGSL*LPGRPW
Trigger: CCAAGGTCGTCCAGGCAGTCACAGAGAACCTAATCC...CCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR TCA 90 bp TTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGGAGGGATTAGGTTCTCTGTaGCTGCCTGGACGACCTTGG +
Preference number: 4 (lower is better)
Translates to: LAEICSLLRKGFIGPLREGLGSL*LPGRPW
Trigger: CCAAGGTCGTCCAGGCAGTCACAGAGAACCTAATCC...CTCCCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp AACATTGACCAAAGTTTCTTACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTCATAGGAGTAGGCCCTaGGGAGGTTCTGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: NIDQSFLLSWEEAAWLKSHRSRP*GGSGGQ
Trigger: CTGCCCTCCAGAACCTCCGCAGGGCCTACTCCTATG...AGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAGAAACTTTGGTCAATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
CDS-3UTR GCA 90 bp AGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGGTTGATGCACTTCAGTaGACGGTGCACCTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: SLAEICSLLRKGFIGPLRVDALQ*TVHLAL
Trigger: CAGGGCAAGGTGCACCGTGCACTGAAGTGCATCAAC...CCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp GGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGTCTGCTGTCTGGAACTaGCTGTGTTTCTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GSLAEICSLLRKGFIGPLSAVWN*LCFCWQ
Trigger: CTGCCAGCAGAAACACAGGCAGTTCCAGACAGCAGA...CAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTGAGAAGTCACAGAGTTaGATGAAGGCCTCAGCACGG +
Preference number: 4 (lower is better)
Translates to: EAAWLKSVHCSGRASLALEKSQS*MKASAR
Trigger: CCGTGCTGAGGCCTTCATCCAACTCTGTGACTTCTC...AAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp ACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCCCTGATAGCAGAGCTTaGCCTTCTGGAAGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: TVLGGGSLAEICSLLRKGPDSRA*PSGRSC
Trigger: ACAACTTCTTCCAGAAGGCCAAGCTCTGCTATCAGG...GCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp CTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTAGAGACTGCTTGGCCTaGTCCACCATCTTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LGGGSLAEICSLLRKGFIRDCLA*STIFWS
Trigger: ACTCCAGAAGATGGTGGACCAGGCCAAGCAGTCTCT...AATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGAGACTGCTTGGCCTaGTCCACCATCTTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: GSLAEICSLLRKGFIGPLRDCLA*STIFWS
Trigger: ACTCCAGAAGATGGTGGACCAGGCCAAGCAGTCTCT...CAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp CTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTAAGTCTTCCACAGCATaGTCAAATTGCTGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: LSWEEAAWLKSVHCSGRAKSSTA*SNCWSR
Trigger: ACGGCTCCAGCAATTTGACCATGCTGTGGAAGACTT...AGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp ACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCAAGTCTTCCACAGCATaGTCAAATTGCTGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: TVLGGGSLAEICSLLRKGKSSTA*SNCWSR
Trigger: ACGGCTCCAGCAATTTGACCATGCTGTGGAAGACTT...GCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp TCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTCACTAGGTTGTCCTaGGTGTCAGTCACCATGTCC +
Preference number: 4 (lower is better)
Translates to: SWEEAAWLKSVHCSGRASFTRLS*VSVTMS
Trigger: GGACATGGTGACTGACACCCAGGACAACCTAGTGAA...TGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp AACATTGACCAAAGTTTCTTACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGCCAGGTTGCCCAGCTaGAAGAAGCAATCCCCACGG +
Preference number: 4 (lower is better)
Translates to: NIDQSFLLSWEEAAWLKSARLPS*KKQSPR
Trigger: CCGTGGGGATTGCTTCTTCCAGCTGGGCAACCTGGC...AGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAGAAACTTTGGTCAATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
CDS-3UTR CCA 90 bp TTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGGAGTGCCTGTGTTTCTGCTaGCAGAAGCCCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LAEICSLLRKGFIGPLRECLCFC*QKPSFS
Trigger: GGAGAAGCTGGGCTTCTGCCAGCAGAAACACAGGCA...CTCCCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp CTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTTGCTCCTCTGCTGTCTaGAACTGCCTGTGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: LGGGSLAEICSLLRKGFICSSAV*NCLCFC
Trigger: GCAGAAACACAGGCAGTTCCAGACAGCAGAGGAGCA...AATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp AGTTTCTTACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAACTGTCGGCACTTaGCCCGGTGCAGGTAGTACT +
Preference number: 4 (lower is better)
Translates to: SFLLSWEEAAWLKSVHCSGTVGT*PGAGST
Trigger: AGTACTACCTGCACCGGGCCAAGTGCCGACAGTTCC...TGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAGAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
CDS-3UTR CCA 90 bp TGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCAGTTCGGCCACTTaGGACTTAAGCACATTCTCC +
Preference number: 4 (lower is better)
Translates to: WEEAAWLKSVHCSGRASLASSAT*DLSTFS
Trigger: GGAGAATGTGCTTAAGTCCCAAGTGGCCGAACTGGC...CAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp TTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGGAGCTCCAGGTCAGTTCCTaGCTCTTCCTGGGTACTGAG +
Preference number: 4 (lower is better)
Translates to: LAEICSLLRKGFIGPLRELQVSS*LFLGTE
Trigger: CTCAGTACCCAGGAAGAGCCAGGAACTGACCTGGAG...CTCCCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp CTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTACCTCAGTGGCGTTCTaGATTAGGTTCTCTGTGACT +
Preference number: 4 (lower is better)
Translates to: LSWEEAAWLKSVHCSGRATSVAF*IRFSVT
Trigger: AGTCACAGAGAACCTAATCCAGAACGCCACTGAGGT...AGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTGATCCTCTGTCTTCTTaGGCTTTGGGACTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: EAAWLKSVHCSGRASLALDPLSS*ALGLGW
Trigger: CCACCCAAGTCCCAAAGCCCAAGAAGACAGAGGATC...AAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp AACATTGACCAAAGTTTCTTACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTTATCAGCAGCCTTGCTaGGCCATGGAGTCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: NIDQSFLLSWEEAAWLKSYQQPC*AMESGP
Trigger: CGGGCCAGACTCCATGGCCCAGCAAGGCTGCTGATA...AGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAGAAACTTTGGTCAATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
CDS-3UTR TCA 90 bp GGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCGGTTATAGTACTCTCTaGCTTTGGCAGGCACTGTTG +
Preference number: 4 (lower is better)
Translates to: GGGSLAEICSLLRKGFIGGYSTL*LWQALL
Trigger: CAACAGTGCCTGCCAAAGTCAGAGAGTACTATAACC...GCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR TCA 90 bp GAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCGGTTATAGTACTCTCTaGCTTTGGCAGGCACTGTTG +
Preference number: 4 (lower is better)
Translates to: EEAAWLKSVHCSGRASLAGYSTL*LWQALL
Trigger: CAACAGTGCCTGCCAAAGTCAGAGAGTACTATAACC...GGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR TCA 90 bp CTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTAGTCACAGAGTTGGATaGAGGCCTCAGCACGGAATA +
Preference number: 4 (lower is better)
Translates to: LGGGSLAEICSLLRKGFISHRVG*RPQHGI
Trigger: TATTCCGTGCTGAGGCCTTCATCCAACTCTGTGACT...AATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR TCA 90 bp CTTACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGTCTCAATGGCACAGTTaGTGCACTTCAGTGCACGGT +
Preference number: 4 (lower is better)
Translates to: LTVLGGGSLAEICSLLRKSQWHS*CTSVHG
Trigger: ACCGTGCACTGAAGTGCATCAACTGTGCCATTGAGA...CTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
CDS-3UTR TCA 90 bp CTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTAGCTTTCACTACTGCTaGGATCTGTTGACGAGATCT +
Preference number: 4 (lower is better)
Translates to: LSWEEAAWLKSVHCSGRASFHYC*DLLTRS
Trigger: AGATCTCGTCAACAGATCTCAGCAGTAGTGAAAGCT...AGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR TCA 90 bp GTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCAGCTTTCACTACTGCTaGGATCTGTTGACGAGATCT +
Preference number: 4 (lower is better)
Translates to: VLGGGSLAEICSLLRKGFSFHYC*DLLTRS
Trigger: AGATCTCGTCAACAGATCTCAGCAGTAGTGAAAGCT...GAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR TCA 90 bp GCACCAAATCCTTGGGGGACCAGATACAATTTCTACTCTCATGTCCTCCCAACACAGTGGATCTGGTATTaGTCTGGGACCAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: APNPWGTRYNFYSHVLPTQWIWY*SGTSPG
Trigger: TCCTGGGCTGGTCCCAGATCAATACCAGATCCACTG...TGTTGGGAGGACATGAGAGTAGAAATTGTATCTGGTCCCCCAAGGATTTGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
CDS-3UTR GCA 90 bp GGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCAGTCACCATGTCCATTaGCTTCAGGAAGTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: GGGSLAEICSLLRKGFIGSHHVH*LQEVFH
Trigger: GTGGAAGACTTCCTGAAGGCAATGGACATGGTGACT...GCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp GGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTAAGCCCTTCTCATTCTaGTCGTCTCTGATAGCCTTG +
Preference number: 4 (lower is better)
Translates to: GGSLAEICSLLRKGFIGPKPFSF*SSLIAL
Trigger: CAAGGCTATCAGAGACGAGCAGAATGAGAAGGGCTT...AGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp TTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGGAGTCTGCTGTCTGGAACTaGCTGTGTTTCTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LAEICSLLRKGFIGPLRESAVWN*LCFCWQ
Trigger: CTGCCAGCAGAAACACAGGCAGTTCCAGACAGCAGA...CTCCCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp AGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGTCTGCTGTCTGGAACTaGCTGTGTTTCTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SLAEICSLLRKGFIGPLRSAVWN*LCFCWQ
Trigger: CTGCCAGCAGAAACACAGGCAGTTCCAGACAGCAGA...CCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp AGTTTCTTACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCACGAGAAGTGCTCCTCTaGTGTCTGGAACTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SFLLSWEEAAWLKSVHCSREVLL*CLELPV
Trigger: CACAGGCAGTTCCAGACAGCAGAGGAGCACTTCTCG...TGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAGAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
CDS-3UTR CCA 90 bp TGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGACACAGAGGGCTTCCTaGAAGTCACACAGCTCATAC +
Preference number: 4 (lower is better)
Translates to: WEEAAWLKSVHCSGRASLTQRAS*KSHSSY
Trigger: GTATGAGCTGTGTGACTTCCAGGAAGCCCTCTGTGT...CAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp CTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTGGAAGAAGAAGAAGTTaGGATCCAGGGGATTGTTCT +
Preference number: 4 (lower is better)
Translates to: LSWEEAAWLKSVHCSGRAGRRRS*DPGDCS
Trigger: AGAACAATCCCCTGGATCCCAACTTCTTCTTCTTCC...AGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCGGAAGAAGAAGAAGTTaGGATCCAGGGGATTGTTCT +
Preference number: 4 (lower is better)
Translates to: VLGGGSLAEICSLLRKGFGRRRS*DPGDCS
Trigger: AGAACAATCCCCTGGATCCCAACTTCTTCTTCTTCC...GAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp AACATTGACCAAAGTTTCTTACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGGAACTGTCGGCACTTaGCCCGGTGCAGGTAGTACT +
Preference number: 4 (lower is better)
Translates to: NIDQSFLLSWEEAAWLKSGTVGT*PGAGST
Trigger: AGTACTACCTGCACCGGGCCAAGTGCCGACAGTTCC...AGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAGAAACTTTGGTCAATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
CDS-3UTR CCA 90 bp TTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGGAGGCCAGTTCGGCCACTTaGGACTTAAGCACATTCTCC +
Preference number: 4 (lower is better)
Translates to: LAEICSLLRKGFIGPLREASSAT*DLSTFS
Trigger: GGAGAATGTGCTTAAGTCCCAAGTGGCCGAACTGGC...CTCCCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCACCTCAGTGGCGTTCTaGATTAGGTTCTCTGTGACT +
Preference number: 4 (lower is better)
Translates to: GGGSLAEICSLLRKGFIGTSVAF*IRFSVT
Trigger: AGTCACAGAGAACCTAATCCAGAACGCCACTGAGGT...GCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp AGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGGATCCTCTGTCTTCTTaGGCTTTGGGACTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SLAEICSLLRKGFIGPLRDPLSS*ALGLGW
Trigger: CCACCCAAGTCCCAAAGCCCAAGAAGACAGAGGATC...CCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp AGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGGTCTTTGTTACTTTCTaGCTGCTGCGCTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SLAEICSLLRKGFIGPLRVFVTF*LLRWAL
Trigger: CAAGGCCCAGCGCAGCAGCCAGAAAGTAACAAAGAC...CCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGCTTCTCTCTGTCTCCTaGGATCTGTTGGACTTCCTG +
Preference number: 4 (lower is better)
Translates to: GSLAEICSLLRKGFIGPLLLSVS*DLLDFL
Trigger: CAGGAAGTCCAACAGATCCCAGGAGACAGAGAGAAG...CAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTCTTCTCTCTGTCTCCTaGGATCTGTTGGACTTCCTG +
Preference number: 4 (lower is better)
Translates to: EAAWLKSVHCSGRASLALLLSVS*DLLDFL
Trigger: CAGGAAGTCCAACAGATCCCAGGAGACAGAGAGAAG...AAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp CTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTCTTCTCTCTGTCTCCTaGGATCTGTTGGACTTCCTG +
Preference number: 4 (lower is better)
Translates to: LGGGSLAEICSLLRKGFILLSVS*DLLDFL
Trigger: CAGGAAGTCCAACAGATCCCAGGAGACAGAGAGAAG...AATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
3UTR CAA 72 bp TTCGGCCCATTTTCTATCATCCGACTTAGCTGGAGCTaGGCCAGTTCGGCCACTTGGGACTTAAGCACATTC +
Preference number: 4 (lower is better)
Translates to: FGPFSIIRLSWS*ASSATWDLSTF
Trigger: GAATGTGCTTAAGTCCCAAGTGGCCGAACTGGCCAAGCTCCAGCTAAGTCGGATGATAGAAAATGGGCCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
CDS-3UTR TCA 90 bp AACATTGACCAAAGTTTCTTACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTATACTCCTGACTGGTTaGCATCTCTGGCCCCGACGT +
Preference number: 4 (lower is better)
Translates to: NIDQSFLLSWEEAAWLKSILLTG*HLWPRR
Trigger: ACGTCGGGGCCAGAGATGTCAACCAGTCAGGAGTAT...AGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAGAAACTTTGGTCAATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
CDS-3UTR TCA 90 bp GGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGACTGCTGAGATCTGTTaGCGAGATCTCACTGAAGCT +
Preference number: 4 (lower is better)
Translates to: GSLAEICSLLRKGFIGPLTAEIC*RDLTEA
Trigger: AGCTTCAGTGAGATCTCGTCAACAGATCTCAGCAGT...CAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR TCA 90 bp CTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTACTGCTGAGATCTGTTaGCGAGATCTCACTGAAGCT +
Preference number: 4 (lower is better)
Translates to: LGGGSLAEICSLLRKGFITAEIC*RDLTEA
Trigger: AGCTTCAGTGAGATCTCGTCAACAGATCTCAGCAGT...AATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR TCA 90 bp GAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCAGCTTTCACTACTGCTaGGATCTGTTGACGAGATCT +
Preference number: 4 (lower is better)
Translates to: EEAAWLKSVHCSGRASLASFHYC*DLLTRS
Trigger: AGATCTCGTCAACAGATCTCAGCAGTAGTGAAAGCT...GGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR TCA 90 bp AGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGGCAGATGGAGTTCTCTaGGTCTTGCTTCTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: SLAEICSLLRKGFIGPLRADGVL*VLLLSV
Trigger: GACAGACAGAAGCAAGACTCAGAGAACTCCATCTGC...CCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161430.8
CDS-3UTR GCA 90 bp CTTACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGAGTCACCATGTCCATTaGCTTCAGGAAGTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LTVLGGGSLAEICSLLRKSHHVH*LQEVFH
Trigger: GTGGAAGACTTCCTGAAGGCAATGGACATGGTGACT...CTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
CDS-3UTR GCA 90 bp GGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGTCACCATGTCCATTaGCTTCAGGAAGTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: GSLAEICSLLRKGFIGPLSHHVH*LQEVFH
Trigger: GTGGAAGACTTCCTGAAGGCAATGGACATGGTGACT...CAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp GAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTAAGCCCTTCTCATTCTaGTCGTCTCTGATAGCCTTG +
Preference number: 4 (lower is better)
Translates to: EAAWLKSVHCSGRASLALKPFSF*SSLIAL
Trigger: CAAGGCTATCAGAGACGAGCAGAATGAGAAGGGCTT...AAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp CTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTAAGCCCTTCTCATTCTaGTCGTCTCTGATAGCCTTG +
Preference number: 4 (lower is better)
Translates to: LGGGSLAEICSLLRKGFIKPFSF*SSLIAL
Trigger: CAAGGCTATCAGAGACGAGCAGAATGAGAAGGGCTT...AATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp TTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGGAGACACAGAGGGCTTCCTaGAAGTCACACAGCTCATAC +
Preference number: 4 (lower is better)
Translates to: LAEICSLLRKGFIGPLRETQRAS*KSHSSY
Trigger: GTATGAGCTGTGTGACTTCCAGGAAGCCCTCTGTGT...CTCCCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp AGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGACACAGAGGGCTTCCTaGAAGTCACACAGCTCATAC +
Preference number: 4 (lower is better)
Translates to: SLAEICSLLRKGFIGPLRTQRAS*KSHSSY
Trigger: GTATGAGCTGTGTGACTTCCAGGAAGCCCTCTGTGT...CCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp TGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGCCTGATAGCAGAGCTTaGCCTTCTGGAAGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: WEEAAWLKSVHCSGRASLPDSRA*PSGRSC
Trigger: ACAACTTCTTCCAGAAGGCCAAGCTCTGCTATCAGG...CAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAAGTCTTCCACAGCATaGTCAAATTGCTGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: GSLAEICSLLRKGFIGPLKSSTA*SNCWSR
Trigger: ACGGCTCCAGCAATTTGACCATGCTGTGGAAGACTT...CAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp TTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGGAGTTCACTAGGTTGTCCTaGGTGTCAGTCACCATGTCC +
Preference number: 4 (lower is better)
Translates to: LAEICSLLRKGFIGPLREFTRLS*VSVTMS
Trigger: GGACATGGTGACTGACACCCAGGACAACCTAGTGAA...CTCCCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp AGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGTTCACTAGGTTGTCCTaGGTGTCAGTCACCATGTCC +
Preference number: 4 (lower is better)
Translates to: SLAEICSLLRKGFIGPLRFTRLS*VSVTMS
Trigger: GGACATGGTGACTGACACCCAGGACAACCTAGTGAA...CCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp AACATTGACCAAAGTTTCTTACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTCTCCAGGTCAGTTCCTaGCTCTTCCTGGGTACTGAG +
Preference number: 4 (lower is better)
Translates to: NIDQSFLLSWEEAAWLKSLQVSS*LFLGTE
Trigger: CTCAGTACCCAGGAAGAGCCAGGAACTGACCTGGAG...AGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAGAAACTTTGGTCAATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
3UTR CAA 72 bp ATGCTAGGAAAGAGGGTGTTCATCACTGCAGCCATCTaGGGATACTCGGGATTGAGAAGCAGTACAGTAGCG +
Preference number: 4 (lower is better)
Translates to: MLGKRVFITAAI*GYSGLRSSTVA
Trigger: CGCTACTGTACTGCTTCTCAATCCCGAGTATCCCAAGATGGCTGCAGTGATGAACACCCTCTTTCCTAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
CDS-3UTR TCA 90 bp AGTTTCTTACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAAGTCACAGAGTTGGATaGAGGCCTCAGCACGGAATA +
Preference number: 4 (lower is better)
Translates to: SFLLSWEEAAWLKSVHCSSHRVG*RPQHGI
Trigger: TATTCCGTGCTGAGGCCTTCATCCAACTCTGTGACT...TGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAGAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
CDS-3UTR TCA 90 bp AGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGACTGCTGAGATCTGTTaGCGAGATCTCACTGAAGCT +
Preference number: 4 (lower is better)
Translates to: SLAEICSLLRKGFIGPLRTAEIC*RDLTEA
Trigger: AGCTTCAGTGAGATCTCGTCAACAGATCTCAGCAGT...CCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR TCA 90 bp GGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGCTTTCACTACTGCTaGGATCTGTTGACGAGATCT +
Preference number: 4 (lower is better)
Translates to: GSLAEICSLLRKGFIGPLSFHYC*DLLTRS
Trigger: AGATCTCGTCAACAGATCTCAGCAGTAGTGAAAGCT...CAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR GCA 90 bp TTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGGAGAGTCACCATGTCCATTaGCTTCAGGAAGTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LAEICSLLRKGFIGPLRESHHVH*LQEVFH
Trigger: GTGGAAGACTTCCTGAAGGCAATGGACATGGTGACT...CTCCCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp AGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGCCTGATAGCAGAGCTTaGCCTTCTGGAAGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: SLAEICSLLRKGFIGPLRPDSRA*PSGRSC
Trigger: ACAACTTCTTCCAGAAGGCCAAGCTCTGCTATCAGG...CCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp TTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGGAGCCTGATAGCAGAGCTTaGCCTTCTGGAAGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: LAEICSLLRKGFIGPLREPDSRA*PSGRSC
Trigger: ACAACTTCTTCCAGAAGGCCAAGCTCTGCTATCAGG...CTCCCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp GGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGGGAAGAAGAAGAAGTTaGGATCCAGGGGATTGTTCT +
Preference number: 4 (lower is better)
Translates to: GSLAEICSLLRKGFIGPLGRRRS*DPGDCS
Trigger: AGAACAATCCCCTGGATCCCAACTTCTTCTTCTTCC...CAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp AGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGAAGTCTTCCACAGCATaGTCAAATTGCTGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: SLAEICSLLRKGFIGPLRKSSTA*SNCWSR
Trigger: ACGGCTCCAGCAATTTGACCATGCTGTGGAAGACTT...CCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp AGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGACCTCAGTGGCGTTCTaGATTAGGTTCTCTGTGACT +
Preference number: 4 (lower is better)
Translates to: SLAEICSLLRKGFIGPLRTSVAF*IRFSVT
Trigger: AGTCACAGAGAACCTAATCCAGAACGCCACTGAGGT...CCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CCA 90 bp TTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGGAGACCTCAGTGGCGTTCTaGATTAGGTTCTCTGTGACT +
Preference number: 4 (lower is better)
Translates to: LAEICSLLRKGFIGPLRETSVAF*IRFSVT
Trigger: AGTCACAGAGAACCTAATCCAGAACGCCACTGAGGT...CTCCCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
3UTR CAA 72 bp CAGTACCGGAAGAAGAAGAAGTTGGGATCCAGGGGATaGTTCTCAATGGCACAGTTGATGCACTTCAGTGCA +
Preference number: 4 (lower is better)
Translates to: QYRKKKKLGSRG*FSMAQLMHFSA
Trigger: TGCACTGAAGTGCATCAACTGTGCCATTGAGAACAATCCCCTGGATCCCAACTTCTTCTTCTTCCGGTACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CAA 72 bp GCTACTGTCCACCCTGGACCTTCTGACCCCATGGCCTaGACTATATTCATAAATTCTGCCTCAAACCCTAGA +
Preference number: 4 (lower is better)
Translates to: ATVHPGPSDPMA*TIFINSASNPR
Trigger: TCTAGGGTTTGAGGCAGAATTTATGAATATAGTCAAGGCCATGGGGTCAGAAGGTCCAGGGTGGACAGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
CDS-3UTR TCA 90 bp AACATTGACCAAAGTTTCTTACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTTCTCAATGGCACAGTTaGTGCACTTCAGTGCACGGT +
Preference number: 4 (lower is better)
Translates to: NIDQSFLLSWEEAAWLKSSQWHS*CTSVHG
Trigger: ACCGTGCACTGAAGTGCATCAACTGTGCCATTGAGA...AGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAGAAACTTTGGTCAATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
CDS-3UTR TCA 90 bp AACATTGACCAAAGTTTCTTACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTACTGCTGAGATCTGTTaGCGAGATCTCACTGAAGCT +
Preference number: 4 (lower is better)
Translates to: NIDQSFLLSWEEAAWLKSTAEIC*RDLTEA
Trigger: AGCTTCAGTGAGATCTCGTCAACAGATCTCAGCAGT...AGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAGAAACTTTGGTCAATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
CDS-3UTR CCA 90 bp AGTTTCTTACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGAAGAAGAAGTTaGGATCCAGGGGATTGTTCT +
Preference number: 4 (lower is better)
Translates to: SFLLSWEEAAWLKSVHCSGRRRS*DPGDCS
Trigger: AGAACAATCCCCTGGATCCCAACTTCTTCTTCTTCC...TGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAGAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
3UTR CAA 72 bp CCCGATGAGCCATCACATGCCCCTGTTCAGGCCTTTTaGTATACATACTTTAGCCAACTATCTAGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: PDEPSHAPVQAF*YTYFSQLSRGE
Trigger: TTCTCCTCTAGATAGTTGGCTAAAGTATGTATACAAAAAGGCCTGAACAGGGGCATGTGATGGCTCATCGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CAA 72 bp AATCCAGGATTAGGGAGATTGAATGGCACCAAATCCTaGGGGGACCAGATACAATTTCTACTCTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: NPGLGRLNGTKS*GDQIQFLLSCP
Trigger: AGGACATGAGAGTAGAAATTGTATCTGGTCCCCCAAGGATTTGGTGCCATTCAATCTCCCTAATCCTGGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CAA 72 bp GGTTTCTGGAAATTGAACTCAATCAAGCTGACAGATTaGTTCAGCAAGCTACTTTACCCGATGAGCCATCAC +
Preference number: 4 (lower is better)
Translates to: GFWKLNSIKLTD*FSKLLYPMSHH
Trigger: GTGATGGCTCATCGGGTAAAGTAGCTTGCTGAACAAATCTGTCAGCTTGATTGAGTTCAATTTCCAGAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CAA 72 bp CTGGATTTTGTTATTTCTCAAGGATGGTTTTCCAGTTaGGAAGTGGTATATGTGCTAGTGTCTATGTTCAGT +
Preference number: 4 (lower is better)
Translates to: LDFVISQGWFSS*EVVYVLVSMFS
Trigger: ACTGAACATAGACACTAGCACATATACCACTTCCAAACTGGAAAACCATCCTTGAGAAATAACAAAATCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
3UTR CAA 72 bp TACTTAGTTTATGGGAATCTTATGGGTTTCTGGAAATaGAACTCAATCAAGCTGACAGATTTGTTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: YLVYGNLMGFWK*NSIKLTDLFSK
Trigger: CTTGCTGAACAAATCTGTCAGCTTGATTGAGTTCAATTTCCAGAAACCCATAAGATTCCCATAAACTAAGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
CDS GCA 90 bp CGGTGGCGAGGCACGGCTACCGGCCCTGGGGCTCGATCCTCGGGCTaGTCGGGCTGGCCTTGGCTGCCGCCGCCGCCTGGGACGTGGCTT +
Preference number: 5 (lower is better)
Translates to: RWRGTATGPGARSSG*SGWPWLPPPPGTWL
Trigger: AAGCCACGTCCCAGGCGGCGGCGGCAGCCAAGGCCAGCCCGAGCAGCCCGAGGATCGAGCCCCAGGGCCGGTAGCCGTGCCTCGCCACCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS GCA 90 bp CCGGCCCTGGGGCTCGATCCTCGGGCTGCTCGGGCTGGCCTTGGCTaGCGCCGCCGCCTGGGACGTGGCTTCTCTGCGCTGCACCTTCGG +
Preference number: 5 (lower is better)
Translates to: PALGLDPRAARAGLG*RRRLGRGFSALHLR
Trigger: CCGAAGGTGCAGCGCAGAGAAGCCACGTCCCAGGCGGCGGCGGCAGCCAAGGCCAGCCCGAGCAGCCCGAGGATCGAGCCCCAGGGCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS CCA 90 bp GGCACGGCTACCGGCCCTGGGGCTCGATCCTCGGGCTGCTCGGGCTaGCCTTGGCTGCCGCCGCCGCCTGGGACGTGGCTTCTCTGCGCT +
Preference number: 5 (lower is better)
Translates to: GTATGPGARSSGCSG*PWLPPPPGTWLLCA
Trigger: AGCGCAGAGAAGCCACGTCCCAGGCGGCGGCGGCAGCCAAGGCCAGCCCGAGCAGCCCGAGGATCGAGCCCCAGGGCCGGTAGCCGTGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS CCA 90 bp GCTACCGGCCCTGGGGCTCGATCCTCGGGCTGCTCGGGCTGGCCTTaGCTGCCGCCGCCGCCTGGGACGTGGCTTCTCTGCGCTGCACCT +
Preference number: 5 (lower is better)
Translates to: ATGPGARSSGCSGWP*LPPPPGTWLLCAAP
Trigger: AGGTGCAGCGCAGAGAAGCCACGTCCCAGGCGGCGGCGGCAGCCAAGGCCAGCCCGAGCAGCCCGAGGATCGAGCCCCAGGGCCGGTAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS CCA 90 bp CGGTGGGCGGCCTCTGACCGAAATCGGGCCTCAACCGGATGGCGGTaGCGAGGCACGGCTACCGGCCCTGGGGCTCGATCCTCGGGCTGC +
Preference number: 5 (lower is better)
Translates to: RWAASDRNRASTGWR*RGTATGPGARSSGC
Trigger: GCAGCCCGAGGATCGAGCCCCAGGGCCGGTAGCCGTGCCTCGCCACCGCCATCCGGTTGAGGCCCGATTTCGGTCAGAGGCCGCCCACCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS GCA 90 bp GCTGCACCTTCGGCTCGTTCTGCGAATGCGACTTCTGGCCCGACTTaGCGGGTGAGGGGTGGGAGCCGGTGCGGACGGGCGGGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: AAPSARSANATSGPT*RVRGGSRCGRAGSR
Trigger: CCGGCTGCCCGCCCGTCCGCACCGGCTCCCACCCCTCACCCGGCAAGTCGGGCCAGAAGTCGCATTCGCAGAACGAGCCGAAGGTGCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS CCA 90 bp TCGTTCTGCGAATGCGACTTCTGGCCCGACTTGCCGGGTGAGGGGTaGGAGCCGGTGCGGACGGGCGGGCAGCCGGCAGTTCGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: SFCECDFWPDLPGEG*EPVRTGGQPAVRRG
Trigger: GCCCCTGCGAACTGCCGGCTGCCCGCCCGTCCGCACCGGCTCCCACCCCTCACCCGGCAAGTCGGGCCAGAAGTCGCATTCGCAGAACGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS TCA 90 bp CTTCGGCTCGTTCTGCGAATGCGACTTCTGGCCCGACTTGCCGGGTaGGGGGTGGGAGCCGGTGCGGACGGGCGGGCAGCCGGCAGTTCG +
Preference number: 5 (lower is better)
Translates to: LRLVLRMRLLARLAG*GVGAGADGRAAGSS
Trigger: CGAACTGCCGGCTGCCCGCCCGTCCGCACCGGCTCCCACCCCTCACCCGGCAAGTCGGGCCAGAAGTCGCATTCGCAGAACGAGCCGAAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS CCA 90 bp TTCTGGCGGTGGGCGGCCTCTGACCGAAATCGGGCCTCAACCGGATaGCGGTGGCGAGGCACGGCTACCGGCCCTGGGGCTCGATCCTCG +
Preference number: 5 (lower is better)
Translates to: FWRWAASDRNRASTG*RWRGTATGPGARSS
Trigger: CGAGGATCGAGCCCCAGGGCCGGTAGCCGTGCCTCGCCACCGCCATCCGGTTGAGGCCCGATTTCGGTCAGAGGCCGCCCACCGCCAGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS GCA 90 bp AATGCGACTTCTGGCCCGACTTGCCGGGTGAGGGGTGGGAGCCGGTaGGGACGGGCGGGCAGCCGGCAGTTCGCAGGGGCTCGAAACATC +
Preference number: 5 (lower is better)
Translates to: NATSGPTCRVRGGSR*GRAGSRQFAGARNI
Trigger: GATGTTTCGAGCCCCTGCGAACTGCCGGCTGCCCGCCCGTCCGCACCGGCTCCCACCCCTCACCCGGCAAGTCGGGCCAGAAGTCGCATT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS GCA 90 bp TCGGGCTGGCCTTGGCTGCCGCCGCCGCCTGGGACGTGGCTTCTCTaGGCTGCACCTTCGGCTCGTTCTGCGAATGCGACTTCTGGCCCG +
Preference number: 5 (lower is better)
Translates to: SGWPWLPPPPGTWLL*AAPSARSANATSGP
Trigger: CGGGCCAGAAGTCGCATTCGCAGAACGAGCCGAAGGTGCAGCGCAGAGAAGCCACGTCCCAGGCGGCGGCGGCAGCCAAGGCCAGCCCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS CCA 90 bp TCGGGCTGCTCGGGCTGGCCTTGGCTGCCGCCGCCGCCTGGGACGTaGCTTCTCTGCGCTGCACCTTCGGCTCGTTCTGCGAATGCGACT +
Preference number: 5 (lower is better)
Translates to: SGCSGWPWLPPPPGT*LLCAAPSARSANAT
Trigger: AGTCGCATTCGCAGAACGAGCCGAAGGTGCAGCGCAGAGAAGCCACGTCCCAGGCGGCGGCGGCAGCCAAGGCCAGCCCGAGCAGCCCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS CCA 90 bp TCGATCCTCGGGCTGCTCGGGCTGGCCTTGGCTGCCGCCGCCGCCTaGGACGTGGCTTCTCTGCGCTGCACCTTCGGCTCGTTCTGCGAA +
Preference number: 5 (lower is better)
Translates to: SILGLLGLALAAAAA*DVASLRCTFGSFCE
Trigger: TTCGCAGAACGAGCCGAAGGTGCAGCGCAGAGAAGCCACGTCCCAGGCGGCGGCGGCAGCCAAGGCCAGCCCGAGCAGCCCGAGGATCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CAA 90 bp AGGGGAGCCGGGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACAGTGCACGGTGCACCTaGCCCTGCACGGCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: RGAGSCRQWAWLPRSGAHSARCT*PCTARV
Trigger: CACCCTGGCCGTGCAGGGCAAGGTGCACCGTGCACT...GTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCCCGGCTCCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS GCA 90 bp GCCGCCTGGGACGTGGCTTCTCTGCGCTGCACCTTCGGCTCGTTCTaGGAATGCGACTTCTGGCCCGACTTGCCGGGTGAGGGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: AAWDVASLRCTFGSF*ECDFWPDLPGEGWE
Trigger: CTCCCACCCCTCACCCGGCAAGTCGGGCCAGAAGTCGCATTCGCAGAACGAGCCGAAGGTGCAGCGCAGAGAAGCCACGTCCCAGGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS GCA 90 bp CTGGCCTTGGCTGCCGCCGCCGCCTGGGACGTGGCTTCTCTGCGCTaGACCTTCGGCTCGTTCTGCGAATGCGACTTCTGGCCCGACTTG +
Preference number: 5 (lower is better)
Translates to: LALAAAAAWDVASLR*TFGSFCECDFWPDL
Trigger: CAAGTCGGGCCAGAAGTCGCATTCGCAGAACGAGCCGAAGGTGCAGCGCAGAGAAGCCACGTCCCAGGCGGCGGCGGCAGCCAAGGCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CAA 90 bp GGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGCTGTGACTTCTGGCCCGACTaGCCGGGTGAGGGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: GVVGNGRGCLGAVHTGSCDFWPD*PGEGWE
Trigger: CTCCCACCCCTCACCCGGCAAGTCGGGCCAGAAGTC...ACAGCTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CAA 90 bp GCCGGGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGTCGTCTCTGATAGCCTaGTTCAGCAGCAGCACGCCC +
Preference number: 5 (lower is better)
Translates to: AGSCRQWAWLPRSGAHRESSLIA*FSSSTP
Trigger: GGGCGTGCTGCTGCTGAACAAGGCTATCAGAGACGA...CTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CAA 90 bp GGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGCTGTCAGGGTGCTGGCATCTaGGAGAGACTGCTTGGCCTG +
Preference number: 5 (lower is better)
Translates to: GVVGNGRGCLGAVHTGSCQGAGI*ERLLGL
Trigger: CAGGCCAAGCAGTCTCTCCAAGATGCCAGCACCCTG...ACAGCTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CAA 90 bp AGGGGAGCCGGGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACGCCTGCTTCACTAGGTaGTCCTGGGTGTCAGTCACC +
Preference number: 5 (lower is better)
Translates to: RGAGSCRQWAWLPRSGAHACFTR*SWVSVT
Trigger: GGTGACTGACACCCAGGACAACCTAGTGAAGCAGGC...GTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCCCGGCTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CAA 90 bp GGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGCTGTTCCGCGAAGGCCAGGTaGCCCAGCTGGAAGAAGCAA +
Preference number: 5 (lower is better)
Translates to: GVVGNGRGCLGAVHTGSCSAKAR*PSWKKQ
Trigger: TTGCTTCTTCCAGCTGGGCAACCTGGCCTTCGCGGA...ACAGCTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CAA 90 bp GGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGCTGTCGACTTAGCTGGAGCTaGGCCAGTTCGGCCACTTGG +
Preference number: 5 (lower is better)
Translates to: GVVGNGRGCLGAVHTGSCRLSWS*ASSATW
Trigger: CCAAGTGGCCGAACTGGCCAAGCTCCAGCTAAGTCG...ACAGCTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CAA 90 bp AGGGGAGCCGGGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACTCTTGGAGAGACTGCTaGGCCTGGTCCACCATCTTC +
Preference number: 5 (lower is better)
Translates to: RGAGSCRQWAWLPRSGAHSWRDC*AWSTIF
Trigger: GAAGATGGTGGACCAGGCCAAGCAGTCTCTCCAAGA...GTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCCCGGCTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CAA 90 bp CTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTAGTGCACGGTGCACCTaGCCCTGCACGGCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: LSWEEAAWLKSVHCSGRASARCT*PCTARV
Trigger: CACCCTGGCCGTGCAGGGCAAGGTGCACCGTGCACT...AGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp ACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCAGTGCACGGTGCACCTaGCCCTGCACGGCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: TVLGGGSLAEICSLLRKGSARCT*PCTARV
Trigger: CACCCTGGCCGTGCAGGGCAAGGTGCACCGTGCACT...GCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp AGGGGAGCCGGGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCAGTCACCATGTCCATaGCCTTCAGGAAGTCTTCCA +
Preference number: 5 (lower is better)
Translates to: RGAGSCRQWAWLPRSGAHQSPCP*PSGSLP
Trigger: TGGAAGACTTCCTGAAGGCAATGGACATGGTGACTG...GTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCCCGGCTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CAA 90 bp AGGGGAGCCGGGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACTTGGGATACTCGGGATaGAGAAGCAGTACAGTAGCG +
Preference number: 5 (lower is better)
Translates to: RGAGSCRQWAWLPRSGAHLGYSG*RSSTVA
Trigger: CGCTACTGTACTGCTTCTCAATCCCGAGTATCCCAA...GTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCCCGGCTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CAA 90 bp GTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCCTGCTGCGCTGGGCCTaGAGTTTCCAGCCCTGGGCG +
Preference number: 5 (lower is better)
Translates to: VLGGGSLAEICSLLRKGFLLRWA*SFQPWA
Trigger: CGCCCAGGGCTGGAAACTCAAGGCCCAGCGCAGCAG...GAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp GCCCTGCACGGCCAGGGTGCTGGCATCTTGGAGAGACTGCTTGGCCTGGTCCACGGGTACTCTCTGACTTaGGCAGGCACTGTTGATCCT +
Preference number: 5 (lower is better)
Translates to: ALHGQGAGILERLLGLVHGYSLT*AGTVDP
Trigger: AGGATCAACAGTGCCTGCCAAAGTCAGAGAGTACCC...GTGGACCAGGCCAAGCAGTCTCTCCAAGATGCCAGCACCCTGGCCGTGCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
CDS CCA 90 bp CTATGGGTCGTGCTGTGGGTCAGGCTGGGAGTCTTTGTTACTTTCTaGCTGCTGCGCTGGGCCTTGAGTTTCCAGCCCTGGGCGCGAACA +
Preference number: 5 (lower is better)
Translates to: LWVVLWVRLGVFVTF*LLRWALSFQPWART
Trigger: TGTTCGCGCCCAGGGCTGGAAACTCAAGGCCCAGCGCAGCAGCCAGAAAGTAACAAAGACTCCCAGCCTGACCCACAGCACGACCCATAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp GGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGCTGTGAGGCACTGATGGCCTaGGTTATAGTACTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: GVVGNGRGCLGAVHTGSCEALMA*VIVLSD
Trigger: GTCAGAGAGTACTATAACCAAGGCCATCAGTGCCTC...ACAGCTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS-3UTR CAA 90 bp GGAGTTGTAGGCAATGGGCGTGGCTGCCTCGGAGCGGTGCACACCGGGAGCTGTCGGAAGAAGAAGAAGTaGGGATCCAGGGGATTGTTC +
Preference number: 5 (lower is better)
Translates to: GVVGNGRGCLGAVHTGSCRKKKK*GSRGLF
Trigger: GAACAATCCCCTGGATCCCAACTTCTTCTTCTTCCG...ACAGCTCCCGGTGTGCACCGCTCCGAGGCAGCCACGCCCATTGCCTACAACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS CCA 90 bp GGTGTGACCTCAGTGGCGTTCTGGATTAGGTTCTCTGTGACTGCCTaGACGACCTTGGGGCTCCAGGTCAGTTCCTGGCTCTTCCTGGGT +
Preference number: 5 (lower is better)
Translates to: GVTSVAFWIRFSVTA*TTLGLQVSSWLFLG
Trigger: ACCCAGGAAGAGCCAGGAACTGACCTGGAGCCCCAAGGTCGTCCAGGCAGTCACAGAGAACCTAATCCAGAACGCCACTGAGGTCACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS CCA 90 bp CTGTGGGTCAGGCTGGGAGTCTTTGTTACTTTCTGGCTGCTGCGCTaGGCCTTGAGTTTCCAGCCCTGGGCGCGAACAGCCTTAGCTCTT +
Preference number: 5 (lower is better)
Translates to: LWVRLGVFVTFWLLR*ALSFQPWARTALAL
Trigger: AAGAGCTAAGGCTGTTCGCGCCCAGGGCTGGAAACTCAAGGCCCAGCGCAGCAGCCAGAAAGTAACAAAGACTCCCAGCCTGACCCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp CTTACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGAGTGCACGGTGCACCTaGCCCTGCACGGCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: LTVLGGGSLAEICSLLRKSARCT*PCTARV
Trigger: CACCCTGGCCGTGCAGGGCAAGGTGCACCGTGCACT...CTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
CDS-3UTR CAA 90 bp GGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGCTGCTGCGCTGGGCCTaGAGTTTCCAGCCCTGGGCG +
Preference number: 5 (lower is better)
Translates to: GSLAEICSLLRKGFIGPLLLRWA*SFQPWA
Trigger: CGCCCAGGGCTGGAAACTCAAGGCCCAGCGCAGCAG...CAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp TGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGCTGCTGCGCTGGGCCTaGAGTTTCCAGCCCTGGGCG +
Preference number: 5 (lower is better)
Translates to: WEEAAWLKSVHCSGRASLLLRWA*SFQPWA
Trigger: CGCCCAGGGCTGGAAACTCAAGGCCCAGCGCAGCAG...CAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp ACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCCAGGGTGCTGGCATCTaGGAGAGACTGCTTGGCCTG +
Preference number: 5 (lower is better)
Translates to: TVLGGGSLAEICSLLRKGQGAGI*ERLLGL
Trigger: CAGGCCAAGCAGTCTCTCCAAGATGCCAGCACCCTG...GCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp GTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCCAGGGTGCTGGCATCTaGGAGAGACTGCTTGGCCTG +
Preference number: 5 (lower is better)
Translates to: VLGGGSLAEICSLLRKGFQGAGI*ERLLGL
Trigger: CAGGCCAAGCAGTCTCTCCAAGATGCCAGCACCCTG...GAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp GTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCCGACTTAGCTGGAGCTaGGCCAGTTCGGCCACTTGG +
Preference number: 5 (lower is better)
Translates to: VLGGGSLAEICSLLRKGFRLSWS*ASSATW
Trigger: CCAAGTGGCCGAACTGGCCAAGCTCCAGCTAAGTCG...GAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS GCA 90 bp GGCCCGGGGTATCATTGGCACTCTCACCAATGTCACTATGGGTCGTaGTGTGGGTCAGGCTGGGAGTCTTTGTTACTTTCTGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GPGYHWHSHQCHYGS*CGSGWESLLLSGCC
Trigger: GCAGCAGCCAGAAAGTAACAAAGACTCCCAGCCTGACCCACAGCACGACCCATAGTGACATTGGTGAGAGTGCCAATGATACCCCGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp ACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTCGTCTCTGATAGCCTaGTTCAGCAGCAGCACGCCC +
Preference number: 5 (lower is better)
Translates to: TVLGGGSLAEICSLLRKGSSLIA*FSSSTP
Trigger: GGGCGTGCTGCTGCTGAACAAGGCTATCAGAGACGA...GCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp GAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCTCCGCGAAGGCCAGGTaGCCCAGCTGGAAGAAGCAA +
Preference number: 5 (lower is better)
Translates to: EEAAWLKSVHCSGRASLASAKAR*PSWKKQ
Trigger: TTGCTTCTTCCAGCTGGGCAACCTGGCCTTCGCGGA...GGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp TCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATCCGCGAAGGCCAGGTaGCCCAGCTGGAAGAAGCAA +
Preference number: 5 (lower is better)
Translates to: SWEEAAWLKSVHCSGRASSAKAR*PSWKKQ
Trigger: TTGCTTCTTCCAGCTGGGCAACCTGGCCTTCGCGGA...TGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp GGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTCGACTTAGCTGGAGCTaGGCCAGTTCGGCCACTTGG +
Preference number: 5 (lower is better)
Translates to: GGSLAEICSLLRKGFIGPRLSWS*ASSATW
Trigger: CCAAGTGGCCGAACTGGCCAAGCTCCAGCTAAGTCG...AGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp GTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCAAGCTATCAGCAGCCTaGCTGGGCCATGGAGTCTGG +
Preference number: 5 (lower is better)
Translates to: VLGGGSLAEICSLLRKGFKLSAA*LGHGVW
Trigger: CCAGACTCCATGGCCCAGCAAGGCTGCTGATAGCTT...GAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS TCA 90 bp TTGGGGCTCCAGGTCAGTTCCTGGCTCTTCCTGGGTACTGAGAGCTaGGGCTTTAGCAGTGTGGACTCAGAGGATTCTATAGCCGTGTGG +
Preference number: 5 (lower is better)
Translates to: LGLQVSSWLFLGTES*GFSSVDSEDSIAVW
Trigger: CCACACGGCTATAGAATCCTCTGAGTCCACACTGCTAAAGCCTCAGCTCTCAGTACCCAGGAAGAGCCAGGAACTGACCTGGAGCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS CCA 90 bp GGGGTATCATTGGCACTCTCACCAATGTCACTATGGGTCGTGCTGTaGGTCAGGCTGGGAGTCTTTGTTACTTTCTGGCTGCTGCGCTGG +
Preference number: 5 (lower is better)
Translates to: GVSLALSPMSLWVVL*VRLGVFVTFWLLRW
Trigger: CCAGCGCAGCAGCCAGAAAGTAACAAAGACTCCCAGCCTGACCCACAGCACGACCCATAGTGACATTGGTGAGAGTGCCAATGATACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS CCA 90 bp ACAGGACAGGACAGGACAGGACAGGCAGTGGATCTGGTATTGATCTaGGACCAGCCCAGGACCTTCTCAGGGTACTCTCTGACTTTGGCA +
Preference number: 5 (lower is better)
Translates to: TGQDRTGQAVDLVLI*DQPRTFSGYSLTLA
Trigger: TGCCAAAGTCAGAGAGTACCCTGAGAAGGTCCTGGGCTGGTCCCAGATCAATACCAGATCCACTGCCTGTCCTGTCCTGTCCTGTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
CDS-3UTR CAA 90 bp GGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCGCCTGCTTCACTAGGTaGTCCTGGGTGTCAGTCACC +
Preference number: 5 (lower is better)
Translates to: GGGSLAEICSLLRKGFIGACFTR*SWVSVT
Trigger: GGTGACTGACACCCAGGACAACCTAGTGAAGCAGGC...GCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp TCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATCGTCTCTGATAGCCTaGTTCAGCAGCAGCACGCCC +
Preference number: 5 (lower is better)
Translates to: SWEEAAWLKSVHCSGRASSSLIA*FSSSTP
Trigger: GGGCGTGCTGCTGCTGAACAAGGCTATCAGAGACGA...TGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp CTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTTCCGCGAAGGCCAGGTaGCCCAGCTGGAAGAAGCAA +
Preference number: 5 (lower is better)
Translates to: LGGGSLAEICSLLRKGFISAKAR*PSWKKQ
Trigger: TTGCTTCTTCCAGCTGGGCAACCTGGCCTTCGCGGA...AATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp GGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGTCCGCGAAGGCCAGGTaGCCCAGCTGGAAGAAGCAA +
Preference number: 5 (lower is better)
Translates to: GSLAEICSLLRKGFIGPLSAKAR*PSWKKQ
Trigger: TTGCTTCTTCCAGCTGGGCAACCTGGCCTTCGCGGA...CAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp GGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGCGACTTAGCTGGAGCTaGGCCAGTTCGGCCACTTGG +
Preference number: 5 (lower is better)
Translates to: GSLAEICSLLRKGFIGPLRLSWS*ASSATW
Trigger: CCAAGTGGCCGAACTGGCCAAGCTCCAGCTAAGTCG...CAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp TGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGCGACTTAGCTGGAGCTaGGCCAGTTCGGCCACTTGG +
Preference number: 5 (lower is better)
Translates to: WEEAAWLKSVHCSGRASLRLSWS*ASSATW
Trigger: CCAAGTGGCCGAACTGGCCAAGCTCCAGCTAAGTCG...CAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp AACATTGACCAAAGTTTCTTACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTCTGCTGCGCTGGGCCTaGAGTTTCCAGCCCTGGGCG +
Preference number: 5 (lower is better)
Translates to: NIDQSFLLSWEEAAWLKSLLRWA*SFQPWA
Trigger: CGCCCAGGGCTGGAAACTCAAGGCCCAGCGCAGCAG...AGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAGAAACTTTGGTCAATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
CDS-3UTR CAA 90 bp ACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTGGCCCGGGGTATCATaGGCACTCTCACCAATGTCA +
Preference number: 5 (lower is better)
Translates to: TVLGGGSLAEICSLLRKGWPGVS*ALSPMS
Trigger: TGACATTGGTGAGAGTGCCAATGATACCCCGGGCCA...GCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp GTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCTGGCCCGGGGTATCATaGGCACTCTCACCAATGTCA +
Preference number: 5 (lower is better)
Translates to: VLGGGSLAEICSLLRKGFWPGVS*ALSPMS
Trigger: TGACATTGGTGAGAGTGCCAATGATACCCCGGGCCA...GAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp TCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCAAAGCTATCAGCAGCCTaGCTGGGCCATGGAGTCTGG +
Preference number: 5 (lower is better)
Translates to: SWEEAAWLKSVHCSGRASKLSAA*LGHGVW
Trigger: CCAGACTCCATGGCCCAGCAAGGCTGCTGATAGCTT...TGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS CCA 90 bp GTGTCAGTCACCATGTCCATTGCCTTCAGGAAGTCTTCCACAGCATaGTCAAATTGCTGGAGCCGTCTACGCAAGGTGCCCCGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: VSVTMSIAFRKSSTA*SNCWSRLRKVPRKK
Trigger: CTTCTTCCGGGGCACCTTGCGTAGACGGCTCCAGCAATTTGACCATGCTGTGGAAGACTTCCTGAAGGCAATGGACATGGTGACTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066478.9
ENSMUST00000091059.12
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS CCA 90 bp TTTGTTACTTTCTGGCTGCTGCGCTGGGCCTTGAGTTTCCAGCCCTaGGCGCGAACAGCCTTAGCTCTTCTGATTCTCTCCTTTACGCTC +
Preference number: 5 (lower is better)
Translates to: FVTFWLLRWALSFQP*ARTALALLILSFTL
Trigger: GAGCGTAAAGGAGAGAATCAGAAGAGCTAAGGCTGTTCGCGCCCAGGGCTGGAAACTCAAGGCCCAGCGCAGCAGCCAGAAAGTAACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp GGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTCTTGGAGAGACTGCTaGGCCTGGTCCACCATCTTC +
Preference number: 5 (lower is better)
Translates to: GGSLAEICSLLRKGFIGPSWRDC*AWSTIF
Trigger: GAAGATGGTGGACCAGGCCAAGCAGTCTCTCCAAGA...AGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp TCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATCTTGGAGAGACTGCTaGGCCTGGTCCACCATCTTC +
Preference number: 5 (lower is better)
Translates to: SWEEAAWLKSVHCSGRASSWRDC*AWSTIF
Trigger: GAAGATGGTGGACCAGGCCAAGCAGTCTCTCCAAGA...TGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp CTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGCCTGCTTCACTAGGTaGTCCTGGGTGTCAGTCACC +
Preference number: 5 (lower is better)
Translates to: LGGGSLAEICSLLRKGFIACFTR*SWVSVT
Trigger: GGTGACTGACACCCAGGACAACCTAGTGAAGCAGGC...AATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp GGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGGCCTGCTTCACTAGGTaGTCCTGGGTGTCAGTCACC +
Preference number: 5 (lower is better)
Translates to: GSLAEICSLLRKGFIGPLACFTR*SWVSVT
Trigger: GGTGACTGACACCCAGGACAACCTAGTGAAGCAGGC...CAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp GAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTCGTCTCTGATAGCCTaGTTCAGCAGCAGCACGCCC +
Preference number: 5 (lower is better)
Translates to: EAAWLKSVHCSGRASLALSSLIA*FSSSTP
Trigger: GGGCGTGCTGCTGCTGAACAAGGCTATCAGAGACGA...AAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp TCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATATACTCCTGACTGGTaGACATCTCTGGCCCCGACG +
Preference number: 5 (lower is better)
Translates to: SWEEAAWLKSVHCSGRASYTPDW*TSLAPT
Trigger: CGTCGGGGCCAGAGATGTCAACCAGTCAGGAGTATA...TGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp CTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTCTTTTTGGAGTCCCTTaGGCCATAGGCAGGTGTGAC +
Preference number: 5 (lower is better)
Translates to: LSWEEAAWLKSVHCSGRALFGVP*AIGRCD
Trigger: GTCACACCTGCCTATGGCCAAAGGGACTCCAAAAAG...AGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp ACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCCTGTCTTCTTGGGCTTaGGGACTTGGGTGGCCTTTT +
Preference number: 5 (lower is better)
Translates to: TVLGGGSLAEICSLLRKGLSSWA*GLGWPF
Trigger: AAAAGGCCACCCAAGTCCCAAAGCCCAAGAAGACAG...GCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp CTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTCTGTCTTCTTGGGCTTaGGGACTTGGGTGGCCTTTT +
Preference number: 5 (lower is better)
Translates to: LSWEEAAWLKSVHCSGRALSSWA*GLGWPF
Trigger: AAAAGGCCACCCAAGTCCCAAAGCCCAAGAAGACAG...AGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp CTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTCGGAAGAAGAAGAAGTaGGGATCCAGGGGATTGTTC +
Preference number: 5 (lower is better)
Translates to: LSWEEAAWLKSVHCSGRARKKKK*GSRGLF
Trigger: GAACAATCCCCTGGATCCCAACTTCTTCTTCTTCCG...AGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp CTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTCAGTCACCATGTCCATaGCCTTCAGGAAGTCTTCCA +
Preference number: 5 (lower is better)
Translates to: LSWEEAAWLKSVHCSGRAQSPCP*PSGSLP
Trigger: TGGAAGACTTCCTGAAGGCAATGGACATGGTGACTG...AGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp GTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCCAGTCACCATGTCCATaGCCTTCAGGAAGTCTTCCA +
Preference number: 5 (lower is better)
Translates to: VLGGGSLAEICSLLRKGFQSPCP*PSGSLP
Trigger: TGGAAGACTTCCTGAAGGCAATGGACATGGTGACTG...GAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp TTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGGAGTCGTCTCTGATAGCCTaGTTCAGCAGCAGCACGCCC +
Preference number: 5 (lower is better)
Translates to: LAEICSLLRKGFIGPLRESSLIA*FSSSTP
Trigger: GGGCGTGCTGCTGCTGAACAAGGCTATCAGAGACGA...CTCCCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp GGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGTATACTCCTGACTGGTaGACATCTCTGGCCCCGACG +
Preference number: 5 (lower is better)
Translates to: GSLAEICSLLRKGFIGPLYTPDW*TSLAPT
Trigger: CGTCGGGGCCAGAGATGTCAACCAGTCAGGAGTATA...CAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp TGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGTATACTCCTGACTGGTaGACATCTCTGGCCCCGACG +
Preference number: 5 (lower is better)
Translates to: WEEAAWLKSVHCSGRASLYTPDW*TSLAPT
Trigger: CGTCGGGGCCAGAGATGTCAACCAGTCAGGAGTATA...CAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp GAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTCTTGGGCTTTGGGACTaGGGTGGCCTTTTTGGAGTC +
Preference number: 5 (lower is better)
Translates to: EAAWLKSVHCSGRASLALLGLWD*GGLFGV
Trigger: GACTCCAAAAAGGCCACCCAAGTCCCAAAGCCCAAG...AAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp GGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCTGTCTTCTTGGGCTTaGGGACTTGGGTGGCCTTTT +
Preference number: 5 (lower is better)
Translates to: GGGSLAEICSLLRKGFIGLSSWA*GLGWPF
Trigger: AAAAGGCCACCCAAGTCCCAAAGCCCAAGAAGACAG...GCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp GGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCTCAGGCTGGGAGTCTTaGTTACTTTCTGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GGGSLAEICSLLRKGFIGSGWES*LLSGCC
Trigger: GCAGCAGCCAGAAAGTAACAAAGACTCCCAGCCTGA...GCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS GCA 90 bp AGTCTTCCACAGCATGGTCAAATTGCTGGAGCCGTCTACGCAAGGTaGCCCGGAAGAAGAAGAAGTTGGGATCCAGGGGATTGTTCTCAA +
Preference number: 5 (lower is better)
Translates to: SLPQHGQIAGAVYAR*PGRRRSWDPGDCSQ
Trigger: TTGAGAACAATCCCCTGGATCCCAACTTCTTCTTCTTCCGGGGCACCTTGCGTAGACGGCTCCAGCAATTTGACCATGCTGTGGAAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066478.9
ENSMUST00000091059.12
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp TTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGGAGTCTTGGAGAGACTGCTaGGCCTGGTCCACCATCTTC +
Preference number: 5 (lower is better)
Translates to: LAEICSLLRKGFIGPLRESWRDC*AWSTIF
Trigger: GAAGATGGTGGACCAGGCCAAGCAGTCTCTCCAAGA...CTCCCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp AACATTGACCAAAGTTTCTTACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTCAGGGTGCTGGCATCTaGGAGAGACTGCTTGGCCTG +
Preference number: 5 (lower is better)
Translates to: NIDQSFLLSWEEAAWLKSQGAGI*ERLLGL
Trigger: CAGGCCAAGCAGTCTCTCCAAGATGCCAGCACCCTG...AGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAGAAACTTTGGTCAATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
CDS-3UTR CAA 90 bp GGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCTTGGGATACTCGGGATaGAGAAGCAGTACAGTAGCG +
Preference number: 5 (lower is better)
Translates to: GGGSLAEICSLLRKGFIGLGYSG*RSSTVA
Trigger: CGCTACTGTACTGCTTCTCAATCCCGAGTATCCCAA...GCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp GAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTCTTTTTGGAGTCCCTTaGGCCATAGGCAGGTGTGAC +
Preference number: 5 (lower is better)
Translates to: EAAWLKSVHCSGRASLALLFGVP*AIGRCD
Trigger: GTCACACCTGCCTATGGCCAAAGGGACTCCAAAAAG...AAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp CTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTCTTTTTGGAGTCCCTTaGGCCATAGGCAGGTGTGAC +
Preference number: 5 (lower is better)
Translates to: LGGGSLAEICSLLRKGFILFGVP*AIGRCD
Trigger: GTCACACCTGCCTATGGCCAAAGGGACTCCAAAAAG...AATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp TTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGGAGCTTGGGCTTTGGGACTaGGGTGGCCTTTTTGGAGTC +
Preference number: 5 (lower is better)
Translates to: LAEICSLLRKGFIGPLRELGLWD*GGLFGV
Trigger: GACTCCAAAAAGGCCACCCAAGTCCCAAAGCCCAAG...CTCCCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp TGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGTCAGGCTGGGAGTCTTaGTTACTTTCTGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: WEEAAWLKSVHCSGRASLSGWES*LLSGCC
Trigger: GCAGCAGCCAGAAAGTAACAAAGACTCCCAGCCTGA...CAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp CTTACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGTCAGGCTGGGAGTCTTaGTTACTTTCTGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LTVLGGGSLAEICSLLRKSGWES*LLSGCC
Trigger: GCAGCAGCCAGAAAGTAACAAAGACTCCCAGCCTGA...CTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
CDS-3UTR CAA 90 bp CTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTTCAGGCTGGGAGTCTTaGTTACTTTCTGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LGGGSLAEICSLLRKGFISGWES*LLSGCC
Trigger: GCAGCAGCCAGAAAGTAACAAAGACTCCCAGCCTGA...AATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp GGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGGAGGCACTGATGGCCTaGGTTATAGTACTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: GSLAEICSLLRKGFIGPLEALMA*VIVLSD
Trigger: GTCAGAGAGTACTATAACCAAGGCCATCAGTGCCTC...CAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp TGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGAGGCACTGATGGCCTaGGTTATAGTACTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: WEEAAWLKSVHCSGRASLEALMA*VIVLSD
Trigger: GTCAGAGAGTACTATAACCAAGGCCATCAGTGCCTC...CAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp CTTACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGAGGCACTGATGGCCTaGGTTATAGTACTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: LTVLGGGSLAEICSLLRKEALMA*VIVLSD
Trigger: GTCAGAGAGTACTATAACCAAGGCCATCAGTGCCTC...CTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
CDS-3UTR CAA 90 bp CTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGAGGCACTGATGGCCTaGGTTATAGTACTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: LGGGSLAEICSLLRKGFIEALMA*VIVLSD
Trigger: GTCAGAGAGTACTATAACCAAGGCCATCAGTGCCTC...AATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp GAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTCGGAAGAAGAAGAAGTaGGGATCCAGGGGATTGTTC +
Preference number: 5 (lower is better)
Translates to: EAAWLKSVHCSGRASLALRKKKK*GSRGLF
Trigger: GAACAATCCCCTGGATCCCAACTTCTTCTTCTTCCG...AAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp CTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTCGGAAGAAGAAGAAGTaGGGATCCAGGGGATTGTTC +
Preference number: 5 (lower is better)
Translates to: LGGGSLAEICSLLRKGFIRKKKK*GSRGLF
Trigger: GAACAATCCCCTGGATCCCAACTTCTTCTTCTTCCG...AATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp GAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTCAGTCACCATGTCCATaGCCTTCAGGAAGTCTTCCA +
Preference number: 5 (lower is better)
Translates to: EAAWLKSVHCSGRASLALQSPCP*PSGSLP
Trigger: TGGAAGACTTCCTGAAGGCAATGGACATGGTGACTG...AAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp CTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTCAGTCACCATGTCCATaGCCTTCAGGAAGTCTTCCA +
Preference number: 5 (lower is better)
Translates to: LGGGSLAEICSLLRKGFIQSPCP*PSGSLP
Trigger: TGGAAGACTTCCTGAAGGCAATGGACATGGTGACTG...AATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp CTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTTTGGGATACTCGGGATaGAGAAGCAGTACAGTAGCG +
Preference number: 5 (lower is better)
Translates to: LGGGSLAEICSLLRKGFILGYSG*RSSTVA
Trigger: CGCTACTGTACTGCTTCTCAATCCCGAGTATCCCAA...AATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp AGCTTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGCTTTTTGGAGTCCCTTaGGCCATAGGCAGGTGTGAC +
Preference number: 5 (lower is better)
Translates to: SLAEICSLLRKGFIGPLRLFGVP*AIGRCD
Trigger: GTCACACCTGCCTATGGCCAAAGGGACTCCAAAAAG...CCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp AGTTTCTTACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCACTTGGGCTTTGGGACTaGGGTGGCCTTTTTGGAGTC +
Preference number: 5 (lower is better)
Translates to: SFLLSWEEAAWLKSVHCSLGLWD*GGLFGV
Trigger: GACTCCAAAAAGGCCACCCAAGTCCCAAAGCCCAAG...TGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAGAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
CDS-3UTR CAA 90 bp TTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGGAGCTGTCTTCTTGGGCTTaGGGACTTGGGTGGCCTTTT +
Preference number: 5 (lower is better)
Translates to: LAEICSLLRKGFIGPLRELSSWA*GLGWPF
Trigger: AAAAGGCCACCCAAGTCCCAAAGCCCAAGAAGACAG...CTCCCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp AGTTTCTTACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTGTTCATTGCTCATGGCCCGGGGTATCATaGGCACTCTCACCAATGTCA +
Preference number: 5 (lower is better)
Translates to: SFLLSWEEAAWLKSVHCSWPGVS*ALSPMS
Trigger: TGACATTGGTGAGAGTGCCAATGATACCCCGGGCCA...TGAGCAATGAACAGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAGAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
CDS-3UTR CAA 90 bp AACATTGACCAAAGTTTCTTACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTAAGCTATCAGCAGCCTaGCTGGGCCATGGAGTCTGG +
Preference number: 5 (lower is better)
Translates to: NIDQSFLLSWEEAAWLKSKLSAA*LGHGVW
Trigger: CCAGACTCCATGGCCCAGCAAGGCTGCTGATAGCTT...AGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAGAAACTTTGGTCAATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
CDS-3UTR CAA 90 bp TTGGCTGAAATCTGTTCATTGCTCAGGAAGGGCTTCATTGGCCCTTTGAGGGAGTTGGGATACTCGGGATaGAGAAGCAGTACAGTAGCG +
Preference number: 5 (lower is better)
Translates to: LAEICSLLRKGFIGPLRELGYSG*RSSTVA
Trigger: CGCTACTGTACTGCTTCTCAATCCCGAGTATCCCAA...CTCCCTCAAAGGGCCAATGAAGCCCTTCCTGAGCAATGAACAGATTTCAGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS-3UTR CAA 90 bp AACATTGACCAAAGTTTCTTACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTCTTGGGCTTTGGGACTaGGGTGGCCTTTTTGGAGTC +
Preference number: 5 (lower is better)
Translates to: NIDQSFLLSWEEAAWLKSLGLWD*GGLFGV
Trigger: GACTCCAAAAAGGCCACCCAAGTCCCAAAGCCCAAG...AGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAGAAACTTTGGTCAATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
CDS-3UTR CAA 90 bp AACATTGACCAAAGTTTCTTACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTCGGAAGAAGAAGAAGTaGGGATCCAGGGGATTGTTC +
Preference number: 5 (lower is better)
Translates to: NIDQSFLLSWEEAAWLKSRKKKK*GSRGLF
Trigger: GAACAATCCCCTGGATCCCAACTTCTTCTTCTTCCG...AGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAGAAACTTTGGTCAATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
CDS-3UTR CAA 90 bp AACATTGACCAAAGTTTCTTACTGTCCTGGGAGGAGGCAGCTTGGCTGAAATCTTTGGGATACTCGGGATaGAGAAGCAGTACAGTAGCG +
Preference number: 5 (lower is better)
Translates to: NIDQSFLLSWEEAAWLKSLGYSG*RSSTVA
Trigger: CGCTACTGTACTGCTTCTCAATCCCGAGTATCCCAA...AGATTTCAGCCAAGCTGCCTCCTCCCAGGACAGTAAGAAACTTTGGTCAATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066478.9
ENSMUST00000161430.8
CDS TCA 90 bp GCCCAGGACCTTCTCAGGGTACTCTCTGACTTTGGCAGGCACTGTTaGTCCTATCATCCTTCGTTTTGTAGGATCTGTCATAACATAGAA +
Preference number: 5 (lower is better)
Translates to: AQDLLRVLSDFGRHC*SYHPSFCRICHNIE
Trigger: TTCTATGTTATGACAGATCCTACAAAACGAAGGATGATAGGATCAACAGTGCCTGCCAAAGTCAGAGAGTACCCTGAGAAGGTCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
CDS CAA 90 bp GGCTACCGGCCCTGGGGCTCGATCCTCGGGCTGCTCGGGCTGGCCTaGGCTGCCGCCGCCGCCTGGGACGTGGCTTCTCTGCGCTGCACC +
Preference number: 6 (lower is better)
Translates to: GYRPWGSILGLLGLA*AAAAAWDVASLRCT
Trigger: GGTGCAGCGCAGAGAAGCCACGTCCCAGGCGGCGGCGGCAGCCAAGGCCAGCCCGAGCAGCCCGAGGATCGAGCCCCAGGGCCGGTAGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS GCA 72 bp GGGCTCGATCCTCGGGCTGCTCGGGCTGGCCTTGGCTaGCGCCGCCGCCTGGGACGTGGCTTCTCTGCGCTG +
Preference number: 6 (lower is better)
Translates to: GLDPRAARAGLG*RRRLGRGFSAL
Trigger: CAGCGCAGAGAAGCCACGTCCCAGGCGGCGGCGGCAGCCAAGGCCAGCCCGAGCAGCCCGAGGATCGAGCCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS TCA 72 bp GTTCTGCGAATGCGACTTCTGGCCCGACTTGCCGGGTaGGGGGTGGGAGCCGGTGCGGACGGGCGGGCAGCC +
Preference number: 6 (lower is better)
Translates to: VLRMRLLARLAG*GVGAGADGRAA
Trigger: GGCTGCCCGCCCGTCCGCACCGGCTCCCACCCCTCACCCGGCAAGTCGGGCCAGAAGTCGCATTCGCAGAAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS CCA 72 bp GAATGCGACTTCTGGCCCGACTTGCCGGGTGAGGGGTaGGAGCCGGTGCGGACGGGCGGGCAGCCGGCAGTT +
Preference number: 6 (lower is better)
Translates to: ECDFWPDLPGEG*EPVRTGGQPAV
Trigger: AACTGCCGGCTGCCCGCCCGTCCGCACCGGCTCCCACCCCTCACCCGGCAAGTCGGGCCAGAAGTCGCATTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS CCA 72 bp TCGGGCTGGCCTTGGCTGCCGCCGCCGCCTGGGACGTaGCTTCTCTGCGCTGCACCTTCGGCTCGTTCTGCG +
Preference number: 6 (lower is better)
Translates to: SGWPWLPPPPGT*LLCAAPSARSA
Trigger: CGCAGAACGAGCCGAAGGTGCAGCGCAGAGAAGCCACGTCCCAGGCGGCGGCGGCAGCCAAGGCCAGCCCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS GCA 72 bp TCGGCTCGTTCTGCGAATGCGACTTCTGGCCCGACTTaGCGGGTGAGGGGTGGGAGCCGGTGCGGACGGGCG +
Preference number: 6 (lower is better)
Translates to: SARSANATSGPT*RVRGGSRCGRA
Trigger: CGCCCGTCCGCACCGGCTCCCACCCCTCACCCGGCAAGTCGGGCCAGAAGTCGCATTCGCAGAACGAGCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS CCA 72 bp GCCTCTGACCGAAATCGGGCCTCAACCGGATGGCGGTaGCGAGGCACGGCTACCGGCCCTGGGGCTCGATCC +
Preference number: 6 (lower is better)
Translates to: ASDRNRASTGWR*RGTATGPGARS
Trigger: GGATCGAGCCCCAGGGCCGGTAGCCGTGCCTCGCCACCGCCATCCGGTTGAGGCCCGATTTCGGTCAGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS CCA 72 bp CGAAACATCTGCCGCCCCGCCGGCCGCCGGCGGAGGTaGGGATCCGAGAGCCTCTGGTGCAAACTGCTAAAG +
Preference number: 6 (lower is better)
Translates to: RNICRPAGRRRR*GSESLWCKLLK
Trigger: CTTTAGCAGTTTGCACCAGAGGCTCTCGGATCCCCACCTCCGCCGGCGGCCGGCGGGGCGGCAGATGTTTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS GCA 72 bp GCTTCTCTGCGCTGCACCTTCGGCTCGTTCTGCGAATaGGACTTCTGGCCCGACTTGCCGGGTGAGGGGTGG +
Preference number: 6 (lower is better)
Translates to: ASLRCTFGSFCE*DFWPDLPGEGW
Trigger: CCACCCCTCACCCGGCAAGTCGGGCCAGAAGTCGCATTCGCAGAACGAGCCGAAGGTGCAGCGCAGAGAAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS GCA 72 bp GACGTGGCTTCTCTGCGCTGCACCTTCGGCTCGTTCTaGGAATGCGACTTCTGGCCCGACTTGCCGGGTGAG +
Preference number: 6 (lower is better)
Translates to: DVASLRCTFGSF*ECDFWPDLPGE
Trigger: CTCACCCGGCAAGTCGGGCCAGAAGTCGCATTCGCAGAACGAGCCGAAGGTGCAGCGCAGAGAAGCCACGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091059.12
CDS CCA 72 bp CTTGGGCCCTCAGGGGCTTCTGTCGTGCTGGTGCTCTaGCTAGGATCCTTGGGATCCTCTGTCTTCTTGGGC +
Preference number: 6 (lower is better)
Translates to: LGPSGASVVLVL*LGSLGSSVFLG
Trigger: GCCCAAGAAGACAGAGGATCCCAAGGATCCTAGCCAGAGCACCAGCACGACAGAAGCCCCTGAGGGCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS CCA 72 bp AGGCTGGGAGTCTTTGTTACTTTCTGGCTGCTGCGCTaGGCCTTGAGTTTCCAGCCCTGGGCGCGAACAGCC +
Preference number: 6 (lower is better)
Translates to: RLGVFVTFWLLR*ALSFQPWARTA
Trigger: GGCTGTTCGCGCCCAGGGCTGGAAACTCAAGGCCCAGCGCAGCAGCCAGAAAGTAACAAAGACTCCCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS CCA 72 bp TTCTGGCTGCTGCGCTGGGCCTTGAGTTTCCAGCCCTaGGCGCGAACAGCCTTAGCTCTTCTGATTCTCTCC +
Preference number: 6 (lower is better)
Translates to: FWLLRWALSFQP*ARTALALLILS
Trigger: GGAGAGAATCAGAAGAGCTAAGGCTGTTCGCGCCCAGGGCTGGAAACTCAAGGCCCAGCGCAGCAGCCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS CCA 72 bp GTGCTGTGGGTCAGGCTGGGAGTCTTTGTTACTTTCTaGCTGCTGCGCTGGGCCTTGAGTTTCCAGCCCTGG +
Preference number: 6 (lower is better)
Translates to: VLWVRLGVFVTF*LLRWALSFQPW
Trigger: CCAGGGCTGGAAACTCAAGGCCCAGCGCAGCAGCCAGAAAGTAACAAAGACTCCCAGCCTGACCCACAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS CAA 90 bp TCAGTGGCGTTCTGGATTAGGTTCTCTGTGACTGCCTGGACGACCTaGGGGCTCCAGGTCAGTTCCTGGCTCTTCCTGGGTACTGAGAGC +
Preference number: 6 (lower is better)
Translates to: SVAFWIRFSVTAWTT*GLQVSSWLFLGTES
Trigger: GCTCTCAGTACCCAGGAAGAGCCAGGAACTGACCTGGAGCCCCAAGGTCGTCCAGGCAGTCACAGAGAACCTAATCCAGAACGCCACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS CAA 72 bp GGGGCTTCTGTCGTGCTGGTGCTCTGGCTAGGATCCTaGGGATCCTCTGTCTTCTTGGGCTTTGGGACTTGG +
Preference number: 6 (lower is better)
Translates to: GASVVLVLWLGS*GSSVFLGFGTW
Trigger: CCAAGTCCCAAAGCCCAAGAAGACAGAGGATCCCAAGGATCCTAGCCAGAGCACCAGCACGACAGAAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS CAA 72 bp CTGATTCTCTCCTTTACGCTCAGGGTAGACCTGGACTaGCTAGGCCTTGGGCCCTCAGGGGCTTCTGTCGTG +
Preference number: 6 (lower is better)
Translates to: LILSFTLRVDLD*LGLGPSGASVV
Trigger: CACGACAGAAGCCCCTGAGGGCCCAAGGCCTAGCAAGTCCAGGTCTACCCTGAGCGTAAAGGAGAGAATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS CAA 72 bp GGAGTCTTTGTTACTTTCTGGCTGCTGCGCTGGGCCTaGAGTTTCCAGCCCTGGGCGCGAACAGCCTTAGCT +
Preference number: 6 (lower is better)
Translates to: GVFVTFWLLRWA*SFQPWARTALA
Trigger: AGCTAAGGCTGTTCGCGCCCAGGGCTGGAAACTCAAGGCCCAGCGCAGCAGCCAGAAAGTAACAAAGACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS CAA 72 bp GGACAGGACAGGACAGGACAGGCAGTGGATCTGGTATaGATCTGGGACCAGCCCAGGACCTTCTCAGGGTAC +
Preference number: 6 (lower is better)
Translates to: GQDRTGQAVDLV*IWDQPRTFSGY
Trigger: GTACCCTGAGAAGGTCCTGGGCTGGTCCCAGATCAATACCAGATCCACTGCCTGTCCTGTCCTGTCCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
CDS CAA 90 bp TTAGCTCTTCTGATTCTCTCCTTTACGCTCAGGGTAGACCTGGACTaGCTAGGCCTTGGGCCCTCAGGGGCTTCTGTCGTGCTGGTGCTC +
Preference number: 6 (lower is better)
Translates to: LALLILSFTLRVDLD*LGLGPSGASVVLVL
Trigger: GAGCACCAGCACGACAGAAGCCCCTGAGGGCCCAAGGCCTAGCAAGTCCAGGTCTACCCTGAGCGTAAAGGAGAGAATCAGAAGAGCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS CAA 90 bp GTCAGGCTGGGAGTCTTTGTTACTTTCTGGCTGCTGCGCTGGGCCTaGAGTTTCCAGCCCTGGGCGCGAACAGCCTTAGCTCTTCTGATT +
Preference number: 6 (lower is better)
Translates to: VRLGVFVTFWLLRWA*SFQPWARTALALLI
Trigger: AATCAGAAGAGCTAAGGCTGTTCGCGCCCAGGGCTGGAAACTCAAGGCCCAGCGCAGCAGCCAGAAAGTAACAAAGACTCCCAGCCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS CAA 90 bp GTGAGGACAGGACAGGACAGGACAGGACAGGCAGTGGATCTGGTATaGATCTGGGACCAGCCCAGGACCTTCTCAGGGTACTCTCTGACT +
Preference number: 6 (lower is better)
Translates to: VRTGQDRTGQAVDLV*IWDQPRTFSGYSLT
Trigger: AGTCAGAGAGTACCCTGAGAAGGTCCTGGGCTGGTCCCAGATCAATACCAGATCCACTGCCTGTCCTGTCCTGTCCTGTCCTGTCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
CDS TCA 72 bp GACAGGACAGGACAGGACAGGCAGTGGATCTGGTATTaGTCTGGGACCAGCCCAGGACCTTCTCAGGGTACT +
Preference number: 6 (lower is better)
Translates to: DRTGQDRQWIWY*SGTSPGPSQGT
Trigger: AGTACCCTGAGAAGGTCCTGGGCTGGTCCCAGATCAATACCAGATCCACTGCCTGTCCTGTCCTGTCCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
CDS CCA 72 bp CACCAATGTCACTATGGGTCGTGCTGTGGGTCAGGCTaGGAGTCTTTGTTACTTTCTGGCTGCTGCGCTGGG +
Preference number: 6 (lower is better)
Translates to: HQCHYGSCCGSG*ESLLLSGCCAG
Trigger: CCCAGCGCAGCAGCCAGAAAGTAACAAAGACTCCCAGCCTGACCCACAGCACGACCCATAGTGACATTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS CCA 72 bp GACAGGACAGGACAGGCAGTGGATCTGGTATTGATCTaGGACCAGCCCAGGACCTTCTCAGGGTACTCTCTG +
Preference number: 6 (lower is better)
Translates to: DRTGQAVDLVLI*DQPRTFSGYSL
Trigger: CAGAGAGTACCCTGAGAAGGTCCTGGGCTGGTCCCAGATCAATACCAGATCCACTGCCTGTCCTGTCCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
CDS CAA 72 bp TTCTGGATTAGGTTCTCTGTGACTGCCTGGACGACCTaGGGGCTCCAGGTCAGTTCCTGGCTCTTCCTGGGT +
Preference number: 6 (lower is better)
Translates to: FWIRFSVTAWTT*GLQVSSWLFLG
Trigger: ACCCAGGAAGAGCCAGGAACTGACCTGGAGCCCCAAGGTCGTCCAGGCAGTCACAGAGAACCTAATCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS CAA 90 bp TCCGCGAAGGCCAGGTTGCCCAGCTGGAAGAAGCAATCCCCACGGTaGATGTACAAGCCCTTCTCATTCTGCTCGTCTCTGATAGCCTTG +
Preference number: 6 (lower is better)
Translates to: SAKARLPSWKKQSPR*MYKPFSFCSSLIAL
Trigger: CAAGGCTATCAGAGACGAGCAGAATGAGAAGGGCTTGTACATCAACCGTGGGGATTGCTTCTTCCAGCTGGGCAACCTGGCCTTCGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066478.9
ENSMUST00000091059.12
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS GCA 72 bp CAGCATGGTCAAATTGCTGGAGCCGTCTACGCAAGGTaGCCCGGAAGAAGAAGAAGTTGGGATCCAGGGGAT +
Preference number: 6 (lower is better)
Translates to: QHGQIAGAVYAR*PGRRRSWDPGD
Trigger: ATCCCCTGGATCCCAACTTCTTCTTCTTCCGGGGCACCTTGCGTAGACGGCTCCAGCAATTTGACCATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066478.9
ENSMUST00000091059.12
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS CCA 72 bp AGGCCTCAGCACGGAATACATAGAAGTCTACCAGTTTaGGGTCCAGGTGGAGGGCACGGGAGAAGAACAGCA +
Preference number: 6 (lower is better)
Translates to: RPQHGIHRSLPV*GPGGGHGRRTA
Trigger: TGCTGTTCTTCTCCCGTGCCCTCCACCTGGACCCCAAACTGGTAGACTTCTATGTATTCCGTGCTGAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066478.9
ENSMUST00000091059.12
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS CCA 72 bp GCTAGGATCCTTGGGATCCTCTGTCTTCTTGGGCTTTaGGACTTGGGTGGCCTTTTTGGAGTCCCTTTGGCC +
Preference number: 6 (lower is better)
Translates to: ARILGILCLLGL*DLGGLFGVPLA
Trigger: GGCCAAAGGGACTCCAAAAAGGCCACCCAAGTCCCAAAGCCCAAGAAGACAGAGGATCCCAAGGATCCTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS CCA 72 bp CTTAAGCTATCAGCAGCCTTGCTGGGCCATGGAGTCTaGCCCGGGGTATCATTGGCACTCTCACCAATGTCA +
Preference number: 6 (lower is better)
Translates to: LKLSAALLGHGV*PGVSLALSPMS
Trigger: TGACATTGGTGAGAGTGCCAATGATACCCCGGGCCAGACTCCATGGCCCAGCAAGGCTGCTGATAGCTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS CAA 72 bp GCCAGGTTGCCCAGCTGGAAGAAGCAATCCCCACGGTaGATGTACAAGCCCTTCTCATTCTGCTCGTCTCTG +
Preference number: 6 (lower is better)
Translates to: ARLPSWKKQSPR*MYKPFSFCSSL
Trigger: CAGAGACGAGCAGAATGAGAAGGGCTTGTACATCAACCGTGGGGATTGCTTCTTCCAGCTGGGCAACCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066478.9
ENSMUST00000091059.12
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS CAA 72 bp GACGAGATCTCACTGAAGCTTAAGCTATCAGCAGCCTaGCTGGGCCATGGAGTCTGGCCCGGGGTATCATTG +
Preference number: 6 (lower is better)
Translates to: DEISLKLKLSAA*LGHGVWPGVSL
Trigger: CAATGATACCCCGGGCCAGACTCCATGGCCCAGCAAGGCTGCTGATAGCTTAAGCTTCAGTGAGATCTCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS CAA 90 bp CTACGCAAGGTGCCCCGGAAGAAGAAGAAGTTGGGATCCAGGGGATaGTTCTCAATGGCACAGTTGATGCACTTCAGTGCACGGTGCACC +
Preference number: 6 (lower is better)
Translates to: LRKVPRKKKKLGSRG*FSMAQLMHFSARCT
Trigger: GGTGCACCGTGCACTGAAGTGCATCAACTGTGCCATTGAGAACAATCCCCTGGATCCCAACTTCTTCTTCTTCCGGGGCACCTTGCGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066478.9
ENSMUST00000091059.12
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS TCA 72 bp TCTGGGACCAGCCCAGGACCTTCTCAGGGTACTCTCTaGCTTTGGCAGGCACTGTTGATCCTATCATCCTTC +
Preference number: 6 (lower is better)
Translates to: SGTSPGPSQGTL*LWQALLILSSF
Trigger: GAAGGATGATAGGATCAACAGTGCCTGCCAAAGTCAGAGAGTACCCTGAGAAGGTCCTGGGCTGGTCCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2
CDS CAA 72 bp AGCCGTCTACGCAAGGTGCCCCGGAAGAAGAAGAAGTaGGGATCCAGGGGATTGTTCTCAATGGCACAGTTG +
Preference number: 6 (lower is better)
Translates to: SRLRKVPRKKKK*GSRGLFSMAQL
Trigger: CAACTGTGCCATTGAGAACAATCCCCTGGATCCCAACTTCTTCTTCTTCCGGGGCACCTTGCGTAGACGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066478.9
ENSMUST00000091059.12
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS CAA 72 bp ATCCTTGGGATCCTCTGTCTTCTTGGGCTTTGGGACTaGGGTGGCCTTTTTGGAGTCCCTTTGGCCATAGGC +
Preference number: 6 (lower is better)
Translates to: ILGILCLLGLWD*GGLFGVPLAIG
Trigger: GCCTATGGCCAAAGGGACTCCAAAAAGGCCACCCAAGTCCCAAAGCCCAAGAAGACAGAGGATCCCAAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS CAA 72 bp GCAGGATCTTCTCTGGGGCTTCAGGAACCTTTAGCTTaGGAGTTTTCTGGGAACGGGCACTGTGAGGCTCCT +
Preference number: 6 (lower is better)
Translates to: AGSSLGLQEPLA*EFSGNGHCEAP
Trigger: AGGAGCCTCACAGTGCCCGTTCCCAGAAAACTCCAAAGCTAAAGGTTCCTGAAGCCCCAGAGAAGATCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091059.12
ENSMUST00000125891.2
ENSMUST00000161430.8
CDS GCA 72 bp CAATCCCCACGGTTGATGTACAAGCCCTTCTCATTCTaGTCGTCTCTGATAGCCTTGTTCAGCAGCAGCACG +
Preference number: 6 (lower is better)
Translates to: QSPRLMYKPFSF*SSLIALFSSST
Trigger: CGTGCTGCTGCTGAACAAGGCTATCAGAGACGAGCAGAATGAGAAGGGCTTGTACATCAACCGTGGGGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066478.9
ENSMUST00000091059.12
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS CAA 90 bp AATTGCTGGAGCCGTCTACGCAAGGTGCCCCGGAAGAAGAAGAAGTaGGGATCCAGGGGATTGTTCTCAATGGCACAGTTGATGCACTTC +
Preference number: 6 (lower is better)
Translates to: NCWSRLRKVPRKKKK*GSRGLFSMAQLMHF
Trigger: GAAGTGCATCAACTGTGCCATTGAGAACAATCCCCTGGATCCCAACTTCTTCTTCTTCCGGGGCACCTTGCGTAGACGGCTCCAGCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066478.9
ENSMUST00000091059.12
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS TCA 72 bp CAGGTCAGTTCCTGGCTCTTCCTGGGTACTGAGAGCTaGGGCTTTAGCAGTGTGGACTCAGAGGATTCTATA +
Preference number: 6 (lower is better)
Translates to: QVSSWLFLGTES*GFSSVDSEDSI
Trigger: TATAGAATCCTCTGAGTCCACACTGCTAAAGCCTCAGCTCTCAGTACCCAGGAAGAGCCAGGAACTGACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066478.9
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS CAA 72 bp GTGCCCCGGAAGAAGAAGAAGTTGGGATCCAGGGGATaGTTCTCAATGGCACAGTTGATGCACTTCAGTGCA +
Preference number: 6 (lower is better)
Translates to: VPRKKKKLGSRG*FSMAQLMHFSA
Trigger: TGCACTGAAGTGCATCAACTGTGCCATTGAGAACAATCCCCTGGATCCCAACTTCTTCTTCTTCCGGGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066478.9
ENSMUST00000091059.12
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS TCA 72 bp GTAGGAGGCACTGATGGCCTTGGTTATAGTACTCTCTaGCTTTGGCAGGCACTGTTGATCCTATCATCCTTC +
Preference number: 6 (lower is better)
Translates to: VGGTDGLGYSTL*LWQALLILSSF
Trigger: GAAGGATGATAGGATCAACAGTGCCTGCCAAAGTCAGAGAGTACTATAACCAAGGCCATCAGTGCCTCCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066478.9
ENSMUST00000091059.12
ENSMUST00000161089.8
ENSMUST00000161430.8
ENSMUST00000161950.8
CDS TCA 72 bp CTTCTCAGGGTACTCTCTGACTTTGGCAGGCACTGTTaGTCCTATCATCCTTCGTTTTGTAGGATCTGTCAT +
Preference number: 6 (lower is better)
Translates to: LLRVLSDFGRHC*SYHPSFCRICH
Trigger: ATGACAGATCCTACAAAACGAAGGATGATAGGATCAACAGTGCCTGCCAAAGTCAGAGAGTACCCTGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125891.2