Pregenerated sensors for TTC12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040219Ensembl transcript IDs: ENSMUST00000055096.5
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAGGTCCCACCTTCTCTGCTGAGGCCTGGCACCTGCCTGGCACCTaGGGACACTGTTACAGCCCCATTGTAGAATACTCCAGTGAGCTC | + |
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Preference number: 1 (lower is better) Translates to: AGPTFSAEAWHLPGT*GHCYSPIVEYSSEL Trigger: GAGCTCACTGGAGTATTCTACAATGGGGCTGTAACAGTGTCCCCAGGTGCCAGGCAGGTGCCAGGCCTCAGCAGAGAAGGTGGGACCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| 3UTR CCA 90 bp | CAATTTGGCTGCTTGAAGGAGGTTTGTTTGCATGAGGCCATGGAATaGGCAGGTCCCACCTTCTCTGCTGAGGCCTGGCACCTGCCTGGC | + |
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Preference number: 1 (lower is better) Translates to: QFGCLKEVCLHEAME*AGPTFSAEAWHLPG Trigger: GCCAGGCAGGTGCCAGGCCTCAGCAGAGAAGGTGGGACCTGCCCATTCCATGGCCTCATGCAAACAAACCTCCTTCAAGCAGCCAAATTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| 3UTR GCA 90 bp | CATGAACCTTGCAATGGAGACCAGCCTGTTGATTCTGCACCCCGATaGCACCTTCCAAGCCCTGCCGAGTTCTTTGAAAGCTGCAGATTC | + |
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Preference number: 1 (lower is better) Translates to: HEPCNGDQPVDSAPR*HLPSPAEFFESCRF Trigger: GAATCTGCAGCTTTCAAAGAACTCGGCAGGGCTTGGAAGGTGGCATCGGGGTGCAGAATCAACAGGCTGGTCTCCATTGCAAGGTTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| 3UTR GCA 90 bp | CTTCCCTCAGGATCTAGTTCTCATCTAGTGGTGTTGCTGCAAGGGTaGCTGGGAAATGAGGCTTTTGATAGGCTGTTTTCCAGCCTCAGT | + |
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Preference number: 1 (lower is better) Translates to: LPSGSSSHLVVLLQG*LGNEAFDRLFSSLS Trigger: ACTGAGGCTGGAAAACAGCCTATCAAAAGCCTCATTTCCCAGGCACCCTTGCAGCAACACCACTAGATGAGAACTAGATCCTGAGGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| 3UTR-3UTR TCA 90 bp | TGTAAGGCATGTCTCTCCACCTGTCGAGTGTGTGCAACCACCCCACCGCCAGCGTGCAATTTGGCTGCTTaGAGGAGGTTTGTTTGCATG | + |
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Preference number: 2 (lower is better) Translates to: CKACLSTCRVCATTPPPACNLAA*RRFVCM Trigger: CATGCAAACAAACCTCCTTCAAGCAGCCAAATTGCA...CGCTGGCGGTGGGGTGGTTGCACACACTCGACAGGTGGAGAGACATGCCTTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| 3UTR-3UTR GCA 90 bp | CAGGTAGCTGCTGCCACCCTGGTGCTACCACCAGTCTTTTATAGGGCTGAGTGCACTGTGGTAGCCACCTaGTCTCTTCTTCCCAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: QVAAATLVLPPVFYRAECTVVAT*SLLPSK Trigger: TTTGCTGGGAAGAAGAGAGCAGGTGGCTACCACAGT...GCACTCAGCCCTATAAAAGACTGGTGGTAGCACCAGGGTGGCAGCAGCTACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| 3UTR-3UTR TCA 90 bp | CAGGTAGCTGCTGCCACCCTGGTGCTACCACCAGTCTTTTATAGGGCTGAGTGCAGCCTCAGTAGAAAATaGAGGAGCAGGTCAAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: QVAAATLVLPPVFYRAECSLSRK*RSRSKA Trigger: TGCCTTTGACCTGCTCCTTCATTTTCTACTGAGGCT...GCACTCAGCCCTATAAAAGACTGGTGGTAGCACCAGGGTGGCAGCAGCTACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| 3UTR-3UTR GCA 90 bp | GGGATTCAGGTAGCTGCTGCCACCCTGGTGCTACCACCAGTCTTTTATAGGGCTGTGTTGCTGCAAGGGTaGCTGGGAAATGAGGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: GIQVAAATLVLPPVFYRAVLLQG*LGNEAF Trigger: AAAAGCCTCATTTCCCAGGCACCCTTGCAGCAACAC...AGCCCTATAAAAGACTGGTGGTAGCACCAGGGTGGCAGCAGCTACCTGAATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| 3UTR CAA 90 bp | CTCTGCTCTGTTTACCGTCACACATCTCCCTTGCAATTTGGCTGCTaGAAGGAGGTTTGTTTGCATGAGGCCATGGAATGGGCAGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: LCSVYRHTSPLQFGC*KEVCLHEAMEWAGP Trigger: GGGACCTGCCCATTCCATGGCCTCATGCAAACAAACCTCCTTCAAGCAGCCAAATTGCAAGGGAGATGTGTGACGGTAAACAGAGCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| 3UTR-3UTR GCA 90 bp | GTTTGTAAGGCATGTCTCTCCACCTGTCGAGTGTGTGCAACCACCCCACCGCCAAAGATTACAACTCTGTaGGTGAACTCTCAAGCACAG | + |
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Preference number: 2 (lower is better) Translates to: VCKACLSTCRVCATTPPPKITTL*VNSQAQ Trigger: CTGTGCTTGAGAGTTCACGCACAGAGTTGTAATCTT...TGGCGGTGGGGTGGTTGCACACACTCGACAGGTGGAGAGACATGCCTTACAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| 3UTR-3UTR CCA 90 bp | TGTTGCTGCAAGGGTGCCTGGGAAATGAGGCTTTTGATAGGCTGTTTTCCAGCCCAAAGGCATGGGAGATaGATGCTAGAGCAAGCATCA | + |
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Preference number: 2 (lower is better) Translates to: CCCKGAWEMRLLIGCFPAQRHGR*MLEQAS Trigger: TGATGCTTGCTCTAGCATCCATCTCCCATGCCTTTG...GGCTGGAAAACAGCCTATCAAAAGCCTCATTTCCCAGGCACCCTTGCAGCAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| 3UTR-3UTR CCA 90 bp | TCCAGACTTCCAACTGGGTTTCTGCAAATAAAAGCCTGTGTTCTCTCACTTTCACAGAGCAGTGACCCCTaGCCCAGAGTTGTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: SRLPTGFLQIKACVLSLSQSSDP*PRVVCV Trigger: CACACACACAACTCTGGGCCAGGGGTCACTGCTCTG...TGAAAGTGAGAGAACACAGGCTTTTATTTGCAGAAACCCAGTTGGAAGTCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| 3UTR CAA 90 bp | ACCTCTACTTTTCCTCTCTGCTCTGTTTACCGTCACACATCTCCCTaGCAATTTGGCTGCTTGAAGGAGGTTTGTTTGCATGAGGCCATG | + |
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Preference number: 2 (lower is better) Translates to: TSTFPLCSVYRHTSP*QFGCLKEVCLHEAM Trigger: CATGGCCTCATGCAAACAAACCTCCTTCAAGCAGCCAAATTGCAAGGGAGATGTGTGACGGTAAACAGAGCAGAGAGGAAAAGTAGAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| 3UTR-3UTR CCA 90 bp | ACCGCCAGCGTGAAGATTACAACTCTGTGCGTGAACTCTCAAGCACAGTGGAATCATCACTTAACCCACTaGATTCAAAAGCACATGCCA | + |
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Preference number: 2 (lower is better) Translates to: TASVKITTLCVNSQAQWNHHLTH*IQKHMP Trigger: TGGCATGTGCTTTTGAATCCAGTGGGTTAAGTGATG...ATTCCACTGTGCTTGAGAGTTCACGCACAGAGTTGTAATCTTCACGCTGGCGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| 3UTR CCA 72 bp | ATGGAATGGGCAGGTCCCACCTTCTCTGCTGAGGCCTaGCACCTGCCTGGCACCTGGGGACACTGTTACAGC | + |
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Preference number: 3 (lower is better) Translates to: MEWAGPTFSAEA*HLPGTWGHCYS Trigger: GCTGTAACAGTGTCCCCAGGTGCCAGGCAGGTGCCAGGCCTCAGCAGAGAAGGTGGGACCTGCCCATTCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| 3UTR-3UTR CAA 90 bp | CTAATGCTGACCCCCAGGCCCAGGACTAGAAACAGCTCCCTTGTCAGGGGAGCCTCTCATCTAGTGGTGTaGCTGCAAGGGTGCCTGGGA | + |
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Preference number: 3 (lower is better) Translates to: LMLTPRPRTRNSSLVRGASHLVV*LQGCLG Trigger: TCCCAGGCACCCTTGCAGCAACACCACTAGATGAGA...GGCTCCCCTGACAAGGGAGCTGTTTCTAGTCCTGGGCCTGGGGGTCAGCATTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| 3UTR-3UTR CAA 90 bp | GTTTGTAAGGCATGTCTCTCCACCTGTCGAGTGTGTGCAACCACCCCACCGCCACTAGAAACAGCTCCCTaGTCAGGGGAGCCACCCATC | + |
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Preference number: 3 (lower is better) Translates to: VCKACLSTCRVCATTPPPLETAP*SGEPPI Trigger: GATGGGTGGCTCCCCTGACAAGGGAGCTGTTTCTAG...TGGCGGTGGGGTGGTTGCACACACTCGACAGGTGGAGAGACATGCCTTACAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| 3UTR CCA 72 bp | ACCTTCTCTGCTGAGGCCTGGCACCTGCCTGGCACCTaGGGACACTGTTACAGCCCCATTGTAGAATACTCC | + |
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Preference number: 3 (lower is better) Translates to: TFSAEAWHLPGT*GHCYSPIVEYS Trigger: GGAGTATTCTACAATGGGGCTGTAACAGTGTCCCCAGGTGCCAGGCAGGTGCCAGGCCTCAGCAGAGAAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| 3UTR CCA 72 bp | TGCTTGAAGGAGGTTTGTTTGCATGAGGCCATGGAATaGGCAGGTCCCACCTTCTCTGCTGAGGCCTGGCAC | + |
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Preference number: 3 (lower is better) Translates to: CLKEVCLHEAME*AGPTFSAEAWH Trigger: GTGCCAGGCCTCAGCAGAGAAGGTGGGACCTGCCCATTCCATGGCCTCATGCAAACAAACCTCCTTCAAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| 3UTR TCA 72 bp | ACCCCGATGCCACCTTCCAAGCCCTGCCGAGTTCTTTaGAAGCTGCAGATTCTGCAACCTCTACTTTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: TPMPPSKPCRVL*KLQILQPLLFL Trigger: GAGGAAAAGTAGAGGTTGCAGAATCTGCAGCTTTCAAAGAACTCGGCAGGGCTTGGAAGGTGGCATCGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| 3UTR GCA 72 bp | AACCACCCCACCGCCAGCGTGAAGATTACAACTCTGTaGGTGAACTCTCAAGCACAGTGGAATGTGACAGTC | + |
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Preference number: 3 (lower is better) Translates to: NHPTASVKITTL*VNSQAQWNVTV Trigger: GACTGTCACATTCCACTGTGCTTGAGAGTTCACGCACAGAGTTGTAATCTTCACGCTGGCGGTGGGGTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| 3UTR GCA 72 bp | GTTGTTAGAGCAGCAGTTTCTACTGTGGTAGCCACCTaGTCTCTTCTTCCCAGCAAAAACCCGGCAGACATC | + |
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Preference number: 3 (lower is better) Translates to: VVRAAVSTVVAT*SLLPSKNPADI Trigger: GATGTCTGCCGGGTTTTTGCTGGGAAGAAGAGAGCAGGTGGCTACCACAGTAGAAACTGCTGCTCTAACAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| 3UTR GCA 72 bp | ACCCTGGTGCTACCACCAGTCTTTTATAGGGCTGAGTaGTGCAGGCAGATGCTAAGGTGTCAGTACCAAACA | + |
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Preference number: 3 (lower is better) Translates to: TLVLPPVFYRAE*CRQMLRCQYQT Trigger: TGTTTGGTACTGACACCTTAGCATCTGCCTGCAGCACTCAGCCCTATAAAAGACTGGTGGTAGCACCAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| 3UTR CCA 72 bp | CTTGTCAGGGGAGCCACCCATCATCACTTAACCCACTaGATTCAAAAGCACATGCCACAGATGCAGTTGGGA | + |
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Preference number: 3 (lower is better) Translates to: LVRGATHHHLTH*IQKHMPQMQLG Trigger: TCCCAACTGCATCTGTGGCATGTGCTTTTGAATCCAGTGGGTTAAGTGATGATGGGTGGCTCCCCTGACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| 3UTR GCA 72 bp | CCAAGCCCTGCCGAGTTCTTTGAAAGCTGCAGATTCTaGAACCTCTACTTTTCCTCTCTGCTCTGTTTACCG | + |
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Preference number: 3 (lower is better) Translates to: PSPAEFFESCRF*NLYFSSLLCLP Trigger: CGGTAAACAGAGCAGAGAGGAAAAGTAGAGGTTGCAGAATCTGCAGCTTTCAAAGAACTCGGCAGGGCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| 3UTR CCA 72 bp | CCTCATGGTATCCTTGTGAGGTTACGAGATGCGAGATaGCTAGTTTGTAAGGCATGTCTCTCCACCTGTCGA | + |
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Preference number: 3 (lower is better) Translates to: PHGILVRLRDAR*LVCKACLSTCR Trigger: TCGACAGGTGGAGAGACATGCCTTACAAACTAGCCATCTCGCATCTCGTAACCTCACAAGGATACCATGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| 3UTR GCA 72 bp | GGATCTAGTTCTCATCTAGTGGTGTTGCTGCAAGGGTaGCTGGGAAATGAGGCTTTTGATAGGCTGTTTTCC | + |
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Preference number: 3 (lower is better) Translates to: GSSSHLVVLLQG*LGNEAFDRLFS Trigger: GGAAAACAGCCTATCAAAAGCCTCATTTCCCAGGCACCCTTGCAGCAACACCACTAGATGAGAACTAGATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| 3UTR CCA 72 bp | GTAGAAAATGAAGGAGCAGGTCAAAGGCATGGGAGATaGATGCTAGAGCAAGCATCAGTTGTTAGAGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: VENEGAGQRHGR*MLEQASVVRAA Trigger: TGCTGCTCTAACAACTGATGCTTGCTCTAGCATCCATCTCCCATGCCTTTGACCTGCTCCTTCATTTTCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| 3UTR CCA 72 bp | GGCTCCAGGTTAGTGATTTTCATCCAGACTTCCAACTaGGTTTCTGCAAATAAAAGCCTGTGTTCTCTCACT | + |
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Preference number: 3 (lower is better) Translates to: GSRLVIFIQTSN*VSANKSLCSLT Trigger: AGTGAGAGAACACAGGCTTTTATTTGCAGAAACCCAGTTGGAAGTCTGGATGAAAATCACTAACCTGGAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| 3UTR CCA 72 bp | TATTTACAGAATACATGGCCCCAGGCATGGAAGTCTTaGTTTCTTTACATCTATAGTGAAGACAATATCTGC | + |
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Preference number: 3 (lower is better) Translates to: YLQNTWPQAWKS*FLYIYSEDNIC Trigger: GCAGATATTGTCTTCACTATAGATGTAAAGAAACCAAGACTTCCATGCCTGGGGCCATGTATTCTGTAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS-3UTR GCA 90 bp | AGGCCATGGAATGGGCAGGTCCCACCTTCTCTGCTGAGGCCTGGCACCTGCCTGGCTTCCCCAGAGCGATaGCTGCATTCAGCTGTACGC | + |
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Preference number: 4 (lower is better) Translates to: RPWNGQVPPSLLRPGTCLASPER*LHSAVR Trigger: GCGTACAGCTGAATGCAGGCATCGCTCTGGGGAAGC...CAGGCAGGTGCCAGGCCTCAGCAGAGAAGGTGGGACCTGCCCATTCCATGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS-3UTR GCA 90 bp | TGCATGAGGCCATGGAATGGGCAGGTCCCACCTTCTCTGCTGAGGCCTGGCACCACCTGGGCTCAGCAGTaGACAGCTTCCCCAGAGCGA | + |
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Preference number: 4 (lower is better) Translates to: CMRPWNGQVPPSLLRPGTTWAQQ*TASPER Trigger: TCGCTCTGGGGAAGCTGTGCACTGCTGAGCCCAGGT...GGTGCCAGGCCTCAGCAGAGAAGGTGGGACCTGCCCATTCCATGGCCTCATGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS-3UTR GCA 90 bp | TGTAAGGCATGTCTCTCCACCTGTCGAGTGTGTGCAACCACCCCACCGCCAGCGGTCCTTCTCCACGGATaGCAAGAAGGCATCTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: CKACLSTCRVCATTPPPAVLLHG*QEGIWA Trigger: AGCCCAGATGCCTTCTTGGCATCCGTGGAGAAGGAC...CGCTGGCGGTGGGGTGGTTGCACACACTCGACAGGTGGAGAGACATGCCTTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS-3UTR GCA 90 bp | TGCATGAGGCCATGGAATGGGCAGGTCCCACCTTCTCTGCTGAGGCCTGGCACCCTCCTTCAGGGCATCTaGCAGGACTCTGTTTTCTCG | + |
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Preference number: 4 (lower is better) Translates to: CMRPWNGQVPPSLLRPGTLLQGI*QDSVFS Trigger: CGAGAAAACAGAGTCCTGGCAGATGCCCTGAAGGAG...GGTGCCAGGCCTCAGCAGAGAAGGTGGGACCTGCCCATTCCATGGCCTCATGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS-3UTR TCA 90 bp | GGGATTCAGGTAGCTGCTGCCACCCTGGTGCTACCACCAGTCTTTTATAGGGCTCGGCCATTCTCCGTCTaGGTGAGCTGCAGCAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: GIQVAAATLVLPPVFYRARPFSV*VSCSSR Trigger: CCTACTGCTGCAGCTCACTCAGACGGAGAATGGCCG...AGCCCTATAAAAGACTGGTGGTAGCACCAGGGTGGCAGCAGCTACCTGAATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS-3UTR GCA 90 bp | GTTTGTAAGGCATGTCTCTCCACCTGTCGAGTGTGTGCAACCACCCCACCGCCACACTGGGCACTTCCATaGAGTTGCCAAGGCAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: VCKACLSTCRVCATTPPPHWALP*SCQGRG Trigger: CCCTCTGCCTTGGCAACTGCATGGAAGTGCCCAGTG...TGGCGGTGGGGTGGTTGCACACACTCGACAGGTGGAGAGACATGCCTTACAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS-3UTR GCA 90 bp | CAGGTAGCTGCTGCCACCCTGGTGCTACCACCAGTCTTTTATAGGGCTGAGTGCCAGCAAGGAAGGGGCTaGACTGGGCACTTCCATGCA | + |
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Preference number: 4 (lower is better) Translates to: QVAAATLVLPPVFYRAECQQGRG*TGHFHA Trigger: TGCATGGAAGTGCCCAGTGCAGCCCCTTCCTTGCTG...GCACTCAGCCCTATAAAAGACTGGTGGTAGCACCAGGGTGGCAGCAGCTACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS-3UTR CCA 90 bp | CTAATGCTGACCCCCAGGCCCAGGACTAGAAACAGCTCCCTTGTCAGGGGAGCCTTCTTCAGGGCCACGTaGGCTTTCCCCATGTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: LMLTPRPRTRNSSLVRGAFFRAT*AFPMWK Trigger: TTTCCACATGGGGAAAGCCCACGTGGCCCTGAAGAA...GGCTCCCCTGACAAGGGAGCTGTTTCTAGTCCTGGGCCTGGGGGTCAGCATTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS-3UTR CCA 90 bp | GGGGTACTTGTAAGAAAGCAGCCAGATGCTAATGCTGACCCCCAGGCCCAGGACGTTGGGCAGCAAACCTaGGCTCAGCAGTGCACAGCT | + |
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Preference number: 4 (lower is better) Translates to: GVLVRKQPDANADPQAQDVGQQT*AQQCTA Trigger: AGCTGTGCACTGCTGAGCCCAGGTTTGCTGCCCAAC...GTCCTGGGCCTGGGGGTCAGCATTAGCATCTGGCTGCTTTCTTACAAGTACCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS-3UTR TCA 90 bp | TGTAAGGCATGTCTCTCCACCTGTCGAGTGTGTGCAACCACCCCACCGCCAGCGTCCAGGCTCTGCTGTTaGATCACCAGGATTCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: CKACLSTCRVCATTPPPASRLCC*ITRILE Trigger: TTCCAGAATCCTGGTGATTCAACAGCAGAGCCTGGA...CGCTGGCGGTGGGGTGGTTGCACACACTCGACAGGTGGAGAGACATGCCTTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS-3UTR CCA 90 bp | GGCTGCTTGAAGGAGGTTTGTTTGCATGAGGCCATGGAATGGGCAGGTCCCACCAGAGGGCAGAGGGGCTaGTTATCTTGGGCTCTCGAT | + |
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Preference number: 4 (lower is better) Translates to: GCLKEVCLHEAMEWAGPTRGQRG*LSWALD Trigger: ATCGAGAGCCCAAGATAACCAGCCCCTCTGCCCTCT...GGTGGGACCTGCCCATTCCATGGCCTCATGCAAACAAACCTCCTTCAAGCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS-3UTR TCA 90 bp | GTTTGTAAGGCATGTCTCTCCACCTGTCGAGTGTGTGCAACCACCCCACCGCCATCTTCCCGAGCTGCATaGCAGCTGTTCGTGCAGATA | + |
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Preference number: 4 (lower is better) Translates to: VCKACLSTCRVCATTPPPSSRAA*QLFVQI Trigger: TATCTGCACGAACAGCTGTCATGCAGCTCGGGAAGA...TGGCGGTGGGGTGGTTGCACACACTCGACAGGTGGAGAGACATGCCTTACAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS-3UTR GCA 90 bp | GGGATTCAGGTAGCTGCTGCCACCCTGGTGCTACCACCAGTCTTTTATAGGGCTGGCAGAGGGCAGCATTaGCCGCCAGAATTTCATCCT | + |
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Preference number: 4 (lower is better) Translates to: GIQVAAATLVLPPVFYRAGRGQH*PPEFHP Trigger: AGGATGAAATTCTGGCGGGCAATGCTGCCCTCTGCC...AGCCCTATAAAAGACTGGTGGTAGCACCAGGGTGGCAGCAGCTACCTGAATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS-3UTR CCA 90 bp | CAGGTAGCTGCTGCCACCCTGGTGCTACCACCAGTCTTTTATAGGGCTGAGTGCAGGGGCTGGTTATCTTaGGCTCTCGATTCAGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: QVAAATLVLPPVFYRAECRGWLS*ALDSEL Trigger: GAGCTCTGAATCGAGAGCCCAAGATAACCAGCCCCT...GCACTCAGCCCTATAAAAGACTGGTGGTAGCACCAGGGTGGCAGCAGCTACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS-3UTR TCA 90 bp | TGCATGAGGCCATGGAATGGGCAGGTCCCACCTTCTCTGCTGAGGCCTGGCACCCAGCTTTCTGCTGTATaGAGGGATCATCAGAATTCA | + |
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Preference number: 4 (lower is better) Translates to: CMRPWNGQVPPSLLRPGTQLSAV*RDHQNS Trigger: TGAATTCTGATGATCCCTTCATACAGCAGAAAGCTG...GGTGCCAGGCCTCAGCAGAGAAGGTGGGACCTGCCCATTCCATGGCCTCATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS-3UTR GCA 90 bp | GGCCCAGAGTTGTGTGTGTGTGTGTGTGTGTGTGTGCTCACAGGCTTTTACACTCCCCAGAGCGATGCCTaGATTCAGCTGTACGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: GPELCVCVCVCVLTGFYTPQSDA*IQLYAC Trigger: ACAGGCGTACAGCTGAATGCAGGCATCGCTCTGGGG...AGTGTAAAAGCCTGTGAGCACACACACACACACACACACACACAACTCTGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS-3UTR CCA 90 bp | GGGGTACTTGTAAGAAAGCAGCCAGATGCTAATGCTGACCCCCAGGCCCAGGACGTGTTTTCTGGCAGTTaGCTCAGCGCTGATGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: GVLVRKQPDANADPQAQDVFSGS*LSADVS Trigger: GGAAACATCAGCGCTGAGCCAACTGCCAGAAAACAC...GTCCTGGGCCTGGGGGTCAGCATTAGCATCTGGCTGCTTTCTTACAAGTACCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS-3UTR TCA 90 bp | GGCCCAGAGTTGTGTGTGTGTGTGTGTGTGTGTGTGCTCACAGGCTTTTACACTTCCTCCACAATGGTCTaGGAGGAAGAAAGGGTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GPELCVCVCVCVLTGFYTSSTMV*EEERVR Trigger: CCGGACCCTTTCTTCCTCTCAGACCATTGTGGAGGA...AGTGTAAAAGCCTGTGAGCACACACACACACACACACACACACAACTCTGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR CCA 90 bp | TGGCCCAGAGTTGTGTGTGTGTGTGTGTGTGTGTGTGCTCACAGGCTTTTACACTCTTGGCTCGTTCCTTaGCGTCCTTCTCCACGGATG | + |
|
Preference number: 4 (lower is better) Translates to: WPRVVCVCVCVCAHRLLHSWLVP*RPSPRM Trigger: CATCCGTGGAGAAGGACGCCAAGGAACGAGCCAAGA...GTGTAAAAGCCTGTGAGCACACACACACACACACACACACACAACTCTGGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR CCA 90 bp | ACAACTCTGTGCGTGAACTCTCAAGCACAGTGGAATGTGACAGTCCCCACTCTTAGGAAGGGGCTGCACTaGGCACTTCCATGCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TTLCVNSQAQWNVTVPTLRKGLH*ALPCSC Trigger: GCAACTGCATGGAAGTGCCCAGTGCAGCCCCTTCCT...AAGAGTGGGGACTGTCACATTCCACTGTGCTTGAGAGTTCACGCACAGAGTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| 3UTR CAA 72 bp | GAATTTATTAGCAGAGCAGTGACCCCTGGCCCAGAGTaGTGTGTGTGTGTGTGTGTGTGTGTGCTCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EFISRAVTPGPE*CVCVCVCVLTG Trigger: GCCTGTGAGCACACACACACACACACACACACACAACTCTGGGCCAGGGGTCACTGCTCTGCTAATAAATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| 3UTR CAA 72 bp | TCTCCCTTGCAATTTGGCTGCTTGAAGGAGGTTTGTTaGCATGAGGCCATGGAATGGGCAGGTCCCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPLQFGCLKEVC*HEAMEWAGPTF Trigger: GAAGGTGGGACCTGCCCATTCCATGGCCTCATGCAAACAAACCTCCTTCAAGCAGCCAAATTGCAAGGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR TCA 90 bp | GGGTGCCTGGGAAATGAGGCTTTTGATAGGCTGTTTTCCAGCCTCAGTAGAAAAGCACCTTCATGTCCTTaGGCTTCCCCAAGCCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GCLGNEAFDRLFSSLSRKAPSCP*ASPSPH Trigger: GTGAGGGCTTGGGGAAGCTCAAGGACATGAAGGTGC...TTTTCTACTGAGGCTGGAAAACAGCCTATCAAAAGCCTCATTTCCCAGGCACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR TCA 90 bp | ACCGCCAGCGTGAAGATTACAACTCTGTGCGTGAACTCTCAAGCACAGTGGAATTGTCCTCTTCACACTTaGCCAGGAGGTCCAAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TASVKITTLCVNSQAQWNCPLHT*PGGPSR Trigger: CCTGCTTGGACCTCCTGGTCAAGTGTGAAGAGGACA...ATTCCACTGTGCTTGAGAGTTCACGCACAGAGTTGTAATCTTCACGCTGGCGGT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR GCA 90 bp | GGCTGCTTGAAGGAGGTTTGTTTGCATGAGGCCATGGAATGGGCAGGTCCCACCAATCTCAATGCCTCCTaGATAGAACAAGGGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GCLKEVCLHEAMEWAGPTNLNAS*IEQGCL Trigger: CAGACACCCTTGTTCTATGCAGGAGGCATTGAGATT...GGTGGGACCTGCCCATTCCATGGCCTCATGCAAACAAACCTCCTTCAAGCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR CCA 90 bp | TTCTACTGTGGTAGCCACCTGCTCTCTTCTTCCCAGCAAAAACCCGGCAGACATAAGCCTGGGCTCGGTTaGTGTACAGCACCTTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: FYCGSHLLSSSQQKPGRHKPGLG*CTAPSC Trigger: ACATGAAGGTGCTGTACACCAACCGAGCCCAGGCTT...ATGTCTGCCGGGTTTTTGCTGGGAAGAAGAGAGCAGGTGGCTACCACAGTAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR CCA 90 bp | GGCTGCTTGAAGGAGGTTTGTTTGCATGAGGCCATGGAATGGGCAGGTCCCACCAGTTTTATAAAAGCCTaGGCTCGGTTGGTGTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GCLKEVCLHEAMEWAGPTSFIKA*ARLVYS Trigger: GCTGTACACCAACCGAGCCCAGGCTTTTATAAAACT...GGTGGGACCTGCCCATTCCATGGCCTCATGCAAACAAACCTCCTTCAAGCAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR CCA 90 bp | AATGAAGGAGCAGGTCAAAGGCATGGGAGATGGATGCTAGAGCAAGCATCAGTTAACAGAGCAATGCACTaGCAGAGGGCAGAGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NEGAGQRHGRWMLEQASVNRAMH*QRAEGL Trigger: CAGCCCCTCTGCCCTCTGCCAGTGCATTGCTCTGTT...AACTGATGCTTGCTCTAGCATCCATCTCCCATGCCTTTGACCTGCTCCTTCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR TCA 90 bp | GGCTGCTTGAAGGAGGTTTGTTTGCATGAGGCCATGGAATGGGCAGGTCCCACCTCTCAGAGAGGAAGGTaGTTTCAAGACACAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GCLKEVCLHEAMEWAGPTSQRGR*FQDTSS Trigger: TGAACTTGTGTCTTGAAATCACCTTCCTCTCTGAGA...GGTGGGACCTGCCCATTCCATGGCCTCATGCAAACAAACCTCCTTCAAGCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR GCA 90 bp | TTCTACTGTGGTAGCCACCTGCTCTCTTCTTCCCAGCAAAAACCCGGCAGACATTGGGTCATGTCAAGGTaGTTGATCACTTGGTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: FYCGSHLLSSSQQKPGRHWVMSR*LITWFR Trigger: CCGGAACCAAGTGATCAAGCACCTTGACATGACCCA...ATGTCTGCCGGGTTTTTGCTGGGAAGAAGAGAGCAGGTGGCTACCACAGTAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR GCA 90 bp | AGCTCCCTTGTCAGGGGAGCCACCCATCATCACTTAACCCACTGGATTCAAAAGTACTTCTTCCCGAGCTaGATGACAGCTGTTCGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSLVRGATHHHLTHWIQKYFFPS*MTAVRA Trigger: TGCACGAACAGCTGTCATGCAGCTCGGGAAGAAGTA...CTTTTGAATCCAGTGGGTTAAGTGATGATGGGTGGCTCCCCTGACAAGGGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR CCA 90 bp | GCCTCAGTAGAAAATGAAGGAGCAGGTCAAAGGCATGGGAGATGGATGCTAGAGAGCAGGGAGGACATCTaGAAGGTTGGTCTGGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: ASVENEGAGQRHGRWMLESREDI*KVGLEP Trigger: TGGTTCCAGACCAACCTTCCAGATGTCCTCCCTGCT...CTCTAGCATCCATCTCCCATGCCTTTGACCTGCTCCTTCATTTTCTACTGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR GCA 90 bp | AGCGTGAAGATTACAACTCTGTGCGTGAACTCTCAAGCACAGTGGAATGTGACAGCACTTCCATGCAGTTaGCAAGGCAGAGGGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SVKITTLCVNSQAQWNVTALPCS*QGRGQH Trigger: ATGCTGCCCTCTGCCTTGGCAACTGCATGGAAGTGC...TGTCACATTCCACTGTGCTTGAGAGTTCACGCACAGAGTTGTAATCTTCACGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR CCA 90 bp | TTTTATAGGGCTGAGTGCTGCAGGCAGATGCTAAGGTGTCAGTACCAAACACCCTTTCTCGTCTTCTCTTaGCTCGTTCCTTGGCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FYRAECCRQMLRCQYQTPFLVFS*LVPWRP Trigger: AGGACGCCAAGGAACGAGCCAAGAGAAGACGAGAAA...GGGTGTTTGGTACTGACACCTTAGCATCTGCCTGCAGCACTCAGCCCTATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR TCA 90 bp | AGCAGCAGTTTCTACTGTGGTAGCCACCTGCTCTCTTCTTCCCAGCAAAAACCCGAGTTTGTGGAGGACTaGTCATGGTCTTATTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSFYCGSHLLSSSQQKPEFVED*SWSYSE Trigger: CTCTGAATAAGACCATGATCAGTCCTCCACAAACTC...GGGTTTTTGCTGGGAAGAAGAGAGCAGGTGGCTACCACAGTAGAAACTGCTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR TCA 90 bp | AATGAAGGAGCAGGTCAAAGGCATGGGAGATGGATGCTAGAGCAAGCATCAGTTTCATGTCAAGGTGCTTaGTCACTTGGTTCCGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NEGAGQRHGRWMLEQASVSCQGA*SLGSGH Trigger: ATGGCCGGAACCAAGTGATCAAGCACCTTGACATGA...AACTGATGCTTGCTCTAGCATCCATCTCCCATGCCTTTGACCTGCTCCTTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR GCA 90 bp | TCCAGACTTCCAACTGGGTTTCTGCAAATAAAAGCCTGTGTTCTCTCACTTTCACACCCGTCCTCCTCTTaGTCTCTCTCCATCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRLPTGFLQIKACVLSLSHPSSS*SLSISR Trigger: CCTGCTGATGGAGAGAGAGCAAGAGGAGGACGGGTG...TGAAAGTGAGAGAACACAGGCTTTTATTTGCAGAAACCCAGTTGGAAGTCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR GCA 90 bp | GCCTCAGTAGAAAATGAAGGAGCAGGTCAAAGGCATGGGAGATGGATGCTAGAGTGGGCTCATTTCATCTaGATTCTCGGGAGTTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASVENEGAGQRHGRWMLEWAHFI*ILGSLW Trigger: CCACAAACTCCCGAGAATGCAGATGAAATGAGCCCA...CTCTAGCATCCATCTCCCATGCCTTTGACCTGCTCCTTCATTTTCTACTGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR CCA 90 bp | TGTTGCTGCAAGGGTGCCTGGGAAATGAGGCTTTTGATAGGCTGTTTTCCAGCCCACTGTAGAAGAATATaGCTGTTTCATAGTCGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: CCCKGAWEMRLLIGCFPAHCRRI*LFHSRP Trigger: GGGGCGACTATGAAACAGCCATATTCTTCTACAGTG...GGCTGGAAAACAGCCTATCAAAAGCCTCATTTCCCAGGCACCCTTGCAGCAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR CCA 90 bp | AGCTCCCTTGTCAGGGGAGCCACCCATCATCACTTAACCCACTGGATTCAAAAGTCTGGAAGGTTGGTCTaGAACCAGACTTGGAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSLVRGATHHHLTHWIQKSGRLV*NQTWNL Trigger: AAGATTCCAAGTCTGGTTCCAGACCAACCTTCCAGA...CTTTTGAATCCAGTGGGTTAAGTGATGATGGGTGGCTCCCCTGACAAGGGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| 3UTR CAA 72 bp | GTTTACCGTCACACATCTCCCTTGCAATTTGGCTGCTaGAAGGAGGTTTGTTTGCATGAGGCCATGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: VYRHTSPLQFGC*KEVCLHEAMEW Trigger: CCATTCCATGGCCTCATGCAAACAAACCTCCTTCAAGCAGCCAAATTGCAAGGGAGATGTGTGACGGTAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR CCA 90 bp | GCCTCAGTAGAAAATGAAGGAGCAGGTCAAAGGCATGGGAGATGGATGCTAGAGATTCTCGGGAGTTTGTaGAGGACTGATCATGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ASVENEGAGQRHGRWMLEILGSL*RTDHGL Trigger: AAGACCATGATCAGTCCTCCACAAACTCCCGAGAAT...CTCTAGCATCCATCTCCCATGCCTTTGACCTGCTCCTTCATTTTCTACTGAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR GCA 90 bp | GGGTGCCTGGGAAATGAGGCTTTTGATAGGCTGTTTTCCAGCCTCAGTAGAAAAGTGTTCTTTCACCTGTaGCTTCAGCTTGGGGTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: GCLGNEAFDRLFSSLSRKVFFHL*LQLGVY Trigger: ATAAACCCCAAGCTGAAGGCACAGGTGAAAGAACAC...TTTTCTACTGAGGCTGGAAAACAGCCTATCAAAAGCCTCATTTCCCAGGCACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR GCA 90 bp | TGGCCCAGAGTTGTGTGTGTGTGTGTGTGTGTGTGTGCTCACAGGCTTTTACACCTTCTCTTGAAGATCTaGTTTCTCTCGAAGAGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: WPRVVCVCVCVCAHRLLHLLLKI*FLSKSY Trigger: GTAACTCTTCGAGAGAAAGCAGATCTTCAAGAGAAG...GTGTAAAAGCCTGTGAGCACACACACACACACACACACACACAACTCTGGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR GCA 90 bp | AATGAAGGAGCAGGTCAAAGGCATGGGAGATGGATGCTAGAGCAAGCATCAGTTCTGTCAGAATCTCAATaGCTCCTGCATAGAACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NEGAGQRHGRWMLEQASVLSESQ*LLHRTR Trigger: CCTTGTTCTATGCAGGAGGCATTGAGATTCTGACAG...AACTGATGCTTGCTCTAGCATCCATCTCCCATGCCTTTGACCTGCTCCTTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR CCA 90 bp | AGCGTGAAGATTACAACTCTGTGCGTGAACTCTCAAGCACAGTGGAATGTGACAGTCTGGAACCAGACTTaGAATCTTTCTTCTAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SVKITTLCVNSQAQWNVTVWNQT*NLSSRA Trigger: GGCTCTAGAAGAAAGATTCCAAGTCTGGTTCCAGAC...TGTCACATTCCACTGTGCTTGAGAGTTCACGCACAGAGTTGTAATCTTCACGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR CCA 90 bp | TGGAAGTCTTGGTTTCTTTACATCTATAGTGAAGACAATATCTGCCTCATGGTACCTGTGCCTTCAGCTTaGGGTTTATCTCTTCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: WKSWFLYIYSEDNICLMVPVPSA*GLSLQS Trigger: AGATTGAAGAGATAAACCCCAAGCTGAAGGCACAGG...TACCATGAGGCAGATATTGTCTTCACTATAGATGTAAAGAAACCAAGACTTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS GCA 90 bp | TCCCGTGAAGCTCTCGCAGTTGGGCAGCAAACCTGGGCTCAGCAGTaGACAGCTTCCCCAGAGCGATGCCTGCATTCAGCTGTACGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SREALAVGQQTWAQQ*TASPERCLHSAVRL Trigger: CAGGCGTACAGCTGAATGCAGGCATCGCTCTGGGGAAGCTGTGCACTGCTGAGCCCAGGTTTGCTGCCCAACTGCGAGAGCTTCACGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS CCA 90 bp | AGAGCACCCTCACGATGTCCGTCTTCAGCAAGGAAGGGGCTGCACTaGGCACTTCCATGCAGTTGCCAAGGCAGAGGGCAGCATTGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: RAPSRCPSSARKGLH*ALPCSCQGRGQHCP Trigger: CGGGCAATGCTGCCCTCTGCCTTGGCAACTGCATGGAAGTGCCCAGTGCAGCCCCTTCCTTGCTGAAGACGGACATCGTGAGGGTGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS TCA 90 bp | CTTCCCCAGAGCGATGCCTGCATTCAGCTGTACGCCTGTCTCCTTTaGGTCGCTGCCTGCCAGCTTCAAGAGCACCCTCACGATGTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: LPQSDACIQLYACLL*VAACQLQEHPHDVR Trigger: ACGGACATCGTGAGGGTGCTCTTGAAGCTGGCAGGCAGCGACTCAAAGGAGACAGGCGTACAGCTGAATGCAGGCATCGCTCTGGGGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS GCA 90 bp | CCGTCTTCAGCAAGGAAGGGGCTGCACTGGGCACTTCCATGCAGTTaGCAAGGCAGAGGGCAGCATTGCCCGCCAGAATTTCATCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PSSARKGLHWALPCS*QGRGQHCPPEFHPQ Trigger: CTGAGGATGAAATTCTGGCGGGCAATGCTGCCCTCTGCCTTGGCAACTGCATGGAAGTGCCCAGTGCAGCCCCTTCCTTGCTGAAGACGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR CAA 90 bp | TGCATGAGGCCATGGAATGGGCAGGTCCCACCTTCTCTGCTGAGGCCTGGCACCTTTTCTCGTCTTCTCTaGGCTCGTTCCTTGGCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: CMRPWNGQVPPSLLRPGTFSRLL*ARSLAS Trigger: GGACGCCAAGGAACGAGCCAAGAGAAGACGAGAAAA...GGTGCCAGGCCTCAGCAGAGAAGGTGGGACCTGCCCATTCCATGGCCTCATGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS TCA 90 bp | GGGCAGAGGGGCTGGTTATCTTGGGCTCTCGATTCAGAGCTCCCGTaGGAGCAGGGAGGACATCTGGAAGGTTGGTCTGGAACCAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: GQRGWLSWALDSELP*EQGGHLEGWSGTRL Trigger: AAGTCTGGTTCCAGACCAACCTTCCAGATGTCCTCCCTGCTCTCACGGGAGCTCTGAATCGAGAGCCCAAGATAACCAGCCCCTCTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS GCA 90 bp | CGATGTCCGTCTTCAGCAAGGAAGGGGCTGCACTGGGCACTTCCATaGAGTTGCCAAGGCAGAGGGCAGCATTGCCCGCCAGAATTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: RCPSSARKGLHWALP*SCQGRGQHCPPEFH Trigger: ATGAAATTCTGGCGGGCAATGCTGCCCTCTGCCTTGGCAACTGCATGGAAGTGCCCAGTGCAGCCCCTTCCTTGCTGAAGACGGACATCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS GCA 90 bp | CTGCACTGGGCACTTCCATGCAGTTGCCAAGGCAGAGGGCAGCATTaGCCGCCAGAATTTCATCCTCAGAGGCAAGCAGCAGCATCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LHWALPCSCQGRGQH*PPEFHPQRQAAASK Trigger: TTTTGATGCTGCTGCTTGCCTCTGAGGATGAAATTCTGGCGGGCAATGCTGCCCTCTGCCTTGGCAACTGCATGGAAGTGCCCAGTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR CAA 90 bp | TGTTGCTGCAAGGGTGCCTGGGAAATGAGGCTTTTGATAGGCTGTTTTCCAGCCGCACCCGTCCTCCTCTaGCTCTCTCTCCATCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CCCKGAWEMRLLIGCFPAAPVLL*LSLHQQ Trigger: CTGCTGATGGAGAGAGAGCAAGAGGAGGACGGGTGC...GGCTGGAAAACAGCCTATCAAAAGCCTCATTTCCCAGGCACCCTTGCAGCAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR CAA 90 bp | AGGGCTGAGTGCTGCAGGCAGATGCTAAGGTGTCAGTACCAAACACCCCTGATGAAAGCCTGGGCTCGGTaGGTGTACAGCACCTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: RAECCRQMLRCQYQTPLMKAWAR*VYSTFM Trigger: CATGAAGGTGCTGTACACCAACCGAGCCCAGGCTTT...CATCAGGGGTGTTTGGTACTGACACCTTAGCATCTGCCTGCAGCACTCAGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR CAA 90 bp | CTAATGCTGACCCCCAGGCCCAGGACTAGAAACAGCTCCCTTGTCAGGGGAGCCGTTTCCAGGAGATTTTaGGTCGTCACTGCTGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LMLTPRPRTRNSSLVRGAVSRRF*VVTAVF Trigger: GAACACAGCAGTGACGACCAAAAATCTCCTGGAAAC...GGCTCCCCTGACAAGGGAGCTGTTTCTAGTCCTGGGCCTGGGGGTCAGCATTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR CAA 90 bp | CAGGTAGCTGCTGCCACCCTGGTGCTACCACCAGTCTTTTATAGGGCTGAGTGCGTCATGTCAAGGTGCTaGATCACTTGGTTCCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QVAAATLVLPPVFYRAECVMSRC*ITWFRP Trigger: TGGCCGGAACCAAGTGATCAAGCACCTTGACATGAC...GCACTCAGCCCTATAAAAGACTGGTGGTAGCACCAGGGTGGCAGCAGCTACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS-3UTR CAA 90 bp | GGCCCAGAGTTGTGTGTGTGTGTGTGTGTGTGTGTGCTCACAGGCTTTTACACTGTGAAGCTCTCGCAGTaGGGCAGCAAACCTGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GPELCVCVCVCVLTGFYTVKLSQ*GSKPGL Trigger: GAGCCCAGGTTTGCTGCCCAACTGCGAGAGCTTCAC...AGTGTAAAAGCCTGTGAGCACACACACACACACACACACACACAACTCTGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS TCA 90 bp | CCAAGCCCTCACTGTAGAAGAATATGGCTGTTTCATAGTCGCCCCTaGCAAAGGCCTCGTTCCCCTTCTCCTTCAGGGCATCTGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PSPHCRRIWLFHSRP*QRPRSPSPSGHLPG Trigger: TCCTGGCAGATGCCCTGAAGGAGAAGGGGAACGAGGCCTTTGTCAGGGGCGACTATGAAACAGCCATATTCTTCTACAGTGAGGGCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS TCA 90 bp | ATTTTCTTGACCACTCCTGCTGTCAGGGCCTCCTCCACAATGGTCTaGGAGGAAGAAAGGGTCCGGCTCAGAACACCTGCCGCTCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: IFLTTPAVRASSTMV*EEERVRLRTPAALV Trigger: AACAAGAGCGGCAGGTGTTCTGAGCCGGACCCTTTCTTCCTCTCAGACCATTGTGGAGGAGGCCCTGACAGCAGGAGTGGTCAAGAAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
||
| CDS CCA 90 bp | GGCTCGTTCCTTGGCGTCCTTCTCCACGGATGCCAAGAAGGCATCTaGGCTCATTTCATCTGCATTCTCGGGAGTTTGTGGAGGACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: GSFLGVLLHGCQEGI*AHFICILGSLWRTD Trigger: ATCAGTCCTCCACAAACTCCCGAGAATGCAGATGAAATGAGCCCAGATGCCTTCTTGGCATCCGTGGAGAAGGACGCCAAGGAACGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CCA 90 bp | TCTCCTTCAGGGCATCTGCCAGGACTCTGTTTTCTCGTCTTCTCTTaGCTCGTTCCTTGGCGTCCTTCTCCACGGATGCCAAGAAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SPSGHLPGLCFLVFS*LVPWRPSPRMPRRH Trigger: ATGCCTTCTTGGCATCCGTGGAGAAGGACGCCAAGGAACGAGCCAAGAGAAGACGAGAAAACAGAGTCCTGGCAGATGCCCTGAAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS GCA 90 bp | TTCTCGTCTTCTCTTGGCTCGTTCCTTGGCGTCCTTCTCCACGGATaGCAAGAAGGCATCTGGGCTCATTTCATCTGCATTCTCGGGAGT | + |
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Preference number: 5 (lower is better) Translates to: FSSSLGSFLGVLLHG*QEGIWAHFICILGS Trigger: ACTCCCGAGAATGCAGATGAAATGAGCCCAGATGCCTTCTTGGCATCCGTGGAGAAGGACGCCAAGGAACGAGCCAAGAGAAGACGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CCA 90 bp | CATCTGCCAGGACTCTGTTTTCTCGTCTTCTCTTGGCTCGTTCCTTaGCGTCCTTCTCCACGGATGCCAAGAAGGCATCTGGGCTCATTT | + |
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Preference number: 5 (lower is better) Translates to: HLPGLCFLVFSWLVP*RPSPRMPRRHLGSF Trigger: AAATGAGCCCAGATGCCTTCTTGGCATCCGTGGAGAAGGACGCCAAGGAACGAGCCAAGAGAAGACGAGAAAACAGAGTCCTGGCAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS-3UTR CAA 90 bp | GGGATTCAGGTAGCTGCTGCCACCCTGGTGCTACCACCAGTCTTTTATAGGGCTTGCATTCTCGGGAGTTaGTGGAGGACTGATCATGGT | + |
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Preference number: 5 (lower is better) Translates to: GIQVAAATLVLPPVFYRACILGS*WRTDHG Trigger: ACCATGATCAGTCCTCCACAAACTCCCGAGAATGCA...AGCCCTATAAAAGACTGGTGGTAGCACCAGGGTGGCAGCAGCTACCTGAATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS-3UTR CAA 90 bp | AGCTCCCTTGTCAGGGGAGCCACCCATCATCACTTAACCCACTGGATTCAAAAGAGCACCTTCATGTCCTaGAGCTTCCCCAAGCCCTCA | + |
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Preference number: 5 (lower is better) Translates to: SSLVRGATHHHLTHWIQKSTFMS*SFPKPS Trigger: TGAGGGCTTGGGGAAGCTCAAGGACATGAAGGTGCT...CTTTTGAATCCAGTGGGTTAAGTGATGATGGGTGGCTCCCCTGACAAGGGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS TCA 90 bp | ATTCTTCATGAGCTATCATGTGTTTTCTGGCAGTTGGCTCAGCGCTaGTGTTTCCCAACAGAGCAATGCACTGGCAGAGGGCAGAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ILHELSCVFWQLAQR*CFPTEQCTGRGQRG Trigger: GCCCCTCTGCCCTCTGCCAGTGCATTGCTCTGTTGGGAAACATCAGCGCTGAGCCAACTGCCAGAAAACACATGATAGCTCATGAAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS GCA 90 bp | ACGTTCGCTCTGTGCAGTCAGCCATCATTTCTGTCAGAATCTCAATaGCTCCTGCATAGAACAAGGGTGTCTGGCCAGGCTTGGATAGGG | + |
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Preference number: 5 (lower is better) Translates to: TFALCSQPSFLSESQ*LLHRTRVSGQAWIG Trigger: CCCTATCCAAGCCTGGCCAGACACCCTTGTTCTATGCAGGAGGCATTGAGATTCTGACAGAAATGATGGCTGACTGCACAGAGCGAACGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS-3UTR CAA 90 bp | AGCAGCAGTTTCTACTGTGGTAGCCACCTGCTCTCTTCTTCCCAGCAAAAACCCAGGACATCTGGAAGGTaGGTCTGGAACCAGACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSFYCGSHLLSSSQQKPRTSGR*VWNQTW Trigger: CCAAGTCTGGTTCCAGACCAACCTTCCAGATGTCCT...GGGTTTTTGCTGGGAAGAAGAGAGCAGGTGGCTACCACAGTAGAAACTGCTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS-3UTR CAA 90 bp | GGGATTCAGGTAGCTGCTGCCACCCTGGTGCTACCACCAGTCTTTTATAGGGCTAAGATTCCTCCATCCTaGCTGTTCAGTAGAGACAGG | + |
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Preference number: 5 (lower is better) Translates to: GIQVAAATLVLPPVFYRAKIPPS*LFSRDR Trigger: CCTGTCTCTACTGAACAGCAAGGATGGAGGAATCTT...AGCCCTATAAAAGACTGGTGGTAGCACCAGGGTGGCAGCAGCTACCTGAATCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS-3UTR CAA 90 bp | GGGTGCCTGGGAAATGAGGCTTTTGATAGGCTGTTTTCCAGCCTCAGTAGAAAAAGGCAGAGGGCAGCATaGCCCGCCAGAATTTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: GCLGNEAFDRLFSSLSRKRQRAA*PARISS Trigger: GGATGAAATTCTGGCGGGCAATGCTGCCCTCTGCCT...TTTTCTACTGAGGCTGGAAAACAGCCTATCAAAAGCCTCATTTCCCAGGCACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS GCA 90 bp | CTGGCCTCCCATCCTCAGGAATTTAATCATTTTCTTGACCACTCCTaGTGTCAGGGCCTCCTCCACAATGGTCTGAGAGGAAGAAAGGGT | + |
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Preference number: 5 (lower is better) Translates to: LASHPQEFNHFLDHS*CQGLLHNGLRGRKG Trigger: ACCCTTTCTTCCTCTCAGACCATTGTGGAGGAGGCCCTGACAGCAGGAGTGGTCAAGAAAATGATTAAATTCCTGAGGATGGGAGGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CCA 90 bp | CAAGAAGGCATCTGGGCTCATTTCATCTGCATTCTCGGGAGTTTGTaGAGGACTGATCATGGTCTTATTCAGAGTGGTCCTGCACCCGTC | + |
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Preference number: 5 (lower is better) Translates to: QEGIWAHFICILGSL*RTDHGLIQSGPAPV Trigger: GACGGGTGCAGGACCACTCTGAATAAGACCATGATCAGTCCTCCACAAACTCCCGAGAATGCAGATGAAATGAGCCCAGATGCCTTCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CCA 90 bp | TTCAGAGCTCCCGTGAGAGCAGGGAGGACATCTGGAAGGTTGGTCTaGAACCAGACTTGGAATCTTTCTTCTAGAGCCAAGTCTGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: FRAPVRAGRTSGRLV*NQTWNLSSRAKSVS Trigger: ACTCACAGACTTGGCTCTAGAAGAAAGATTCCAAGTCTGGTTCCAGACCAACCTTCCAGATGTCCTCCCTGCTCTCACGGGAGCTCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CCA 90 bp | ACAAGGGTGTCTGGCCAGGCTTGGATAGGGTTTCCAGGAGATTTTTaGTCGTCACTGCTGTGTTCTTTCCTGAATCCAGAGATTCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TRVSGQAWIGFPGDF*SSLLCSFLNPEILG Trigger: CCCAAGAATCTCTGGATTCAGGAAAGAACACAGCAGTGACGACCAAAAATCTCCTGGAAACCCTATCCAAGCCTGGCCAGACACCCTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS-3UTR CAA 90 bp | ACAACTCTGTGCGTGAACTCTCAAGCACAGTGGAATGTGACAGTCCCCACTCTTCAGTGCTTCACACAGTaGGGTCATGTCAAGGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TTLCVNSQAQWNVTVPTLQCFTQ*GHVKVL Trigger: AAGCACCTTGACATGACCCAACTGTGTGAAGCACTG...AAGAGTGGGGACTGTCACATTCCACTGTGCTTGAGAGTTCACGCACAGAGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS-3UTR CAA 90 bp | AGCGTGAAGATTACAACTCTGTGCGTGAACTCTCAAGCACAGTGGAATGTGACAGAGGGGCTGGTTATCTaGGGCTCTCGATTCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SVKITTLCVNSQAQWNVTEGLVI*GSRFRA Trigger: AGCTCTGAATCGAGAGCCCAAGATAACCAGCCCCTC...TGTCACATTCCACTGTGCTTGAGAGTTCACGCACAGAGTTGTAATCTTCACGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS TCA 90 bp | GAATCATTCAAGTGTTTCATTGTAGAGTTGAGAACTTGTATCCCGTaGAGCTCTCGCAGTTGGGCAGCAAACCTGGGCTCAGCAGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ESFKCFIVELRTCIP*SSRSWAANLGSAVH Trigger: GTGCACTGCTGAGCCCAGGTTTGCTGCCCAACTGCGAGAGCTTCACGGGATACAAGTTCTCAACTCTACAATGAAACACTTGAATGATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CCA 90 bp | GGCATTCCCAAATTCTTCATGAGCTATCATGTGTTTTCTGGCAGTTaGCTCAGCGCTGATGTTTCCCAACAGAGCAATGCACTGGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GIPKFFMSYHVFSGS*LSADVSQQSNALAE Trigger: CTCTGCCAGTGCATTGCTCTGTTGGGAAACATCAGCGCTGAGCCAACTGCCAGAAAACACATGATAGCTCATGAAGAATTTGGGAATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS TCA 90 bp | TCACACTTGACCAGGAGGTCCAAGCAGGCATTCCCAAATTCTTCATaGGCTATCATGTGTTTTCTGGCAGTTGGCTCAGCGCTGATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SHLTRRSKQAFPNSS*AIMCFLAVGSALMF Trigger: AAACATCAGCGCTGAGCCAACTGCCAGAAAACACATGATAGCTCATGAAGAATTTGGGAATGCCTGCTTGGACCTCCTGGTCAAGTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS TCA 90 bp | TATTCCGATGGCTGTATTGGCCTTCTTATCAGAGAAGGCAAGAAATaGCAGCAGTGCTTCACACAGTTGGGTCATGTCAAGGTGCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: YSDGCIGLLIREGKK*QQCFTQLGHVKVLD Trigger: ATCAAGCACCTTGACATGACCCAACTGTGTGAAGCACTGCTGTCATTTCTTGCCTTCTCTGATAAGAAGGCCAATACAGCCATCGGAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS TCA 90 bp | TGGTCTGGAACCAGACTTGGAATCTTTCTTCTAGAGCCAAGTCTGTaGGTATTCCGATGGCTGTATTGGCCTTCTTATCAGAGAAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: WSGTRLGIFLLEPSL*VFRWLYWPSYQRRQ Trigger: TTGCCTTCTCTGATAAGAAGGCCAATACAGCCATCGGAATACTCACAGACTTGGCTCTAGAAGAAAGATTCCAAGTCTGGTTCCAGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS-3UTR CAA 90 bp | TGGAAGTCTTGGTTTCTTTACATCTATAGTGAAGACAATATCTGCCTCATGGTACTCTTGGCTCGTTCCTaGGCGTCCTTCTCCACGGAT | + |
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Preference number: 5 (lower is better) Translates to: WKSWFLYIYSEDNICLMVLLARS*ASFSTD Trigger: ATCCGTGGAGAAGGACGCCAAGGAACGAGCCAAGAG...TACCATGAGGCAGATATTGTCTTCACTATAGATGTAAAGAAACCAAGACTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS TCA 90 bp | ATGACAGCTGTTCGTGCAGATAGCCAGTATCTTTATGGCGTAACGTaGTGCAGTCTGGCCTCCCATCCTCAGGAATTTAATCATTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: MTAVRADSQYLYGVT*CSLASHPQEFNHFL Trigger: AAGAAAATGATTAAATTCCTGAGGATGGGAGGCCAGACTGCATCACGTTACGCCATAAAGATACTGGCTATCTGCACGAACAGCTGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS GCA 90 bp | CTCTCCATCAGCAGGAGTTTCTTTTCCGAGTCCAGGACAGCTTTCTaGTGTATGAAGGGATCATCAGAATTCATCTCTTGGATTAAACTG | + |
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Preference number: 5 (lower is better) Translates to: LSISRSFFSESRTAF*CMKGSSEFISWIKL Trigger: CAGTTTAATCCAAGAGATGAATTCTGATGATCCCTTCATACAGCAGAAAGCTGTCCTGGACTCGGAAAAGAAACTCCTGCTGATGGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS-3UTR CAA 90 bp | AATGAAGGAGCAGGTCAAAGGCATGGGAGATGGATGCTAGAGCAAGCATCAGTTAATTTAATCATTTTCTaGACCACTCCTGCTGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: NEGAGQRHGRWMLEQASVNLIIF*TTPAVR Trigger: CCTGACAGCAGGAGTGGTCAAGAAAATGATTAAATT...AACTGATGCTTGCTCTAGCATCCATCTCCCATGCCTTTGACCTGCTCCTTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS GCA 90 bp | CAAAAGGTCAAACTTTTTATCAAGTCTCACTACTTCTTCCCGAGCTaGATGACAGCTGTTCGTGCAGATAGCCAGTATCTTTATGGCGTA | + |
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Preference number: 5 (lower is better) Translates to: QKVKLFIKSHYFFPS*MTAVRADSQYLYGV Trigger: TACGCCATAAAGATACTGGCTATCTGCACGAACAGCTGTCATGCAGCTCGGGAAGAAGTAGTGAGACTTGATAAAAAGTTTGACCTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS TCA 90 bp | TCAGCAGGAGTTTCTTTTCCGAGTCCAGGACAGCTTTCTGCTGTATaGAGGGATCATCAGAATTCATCTCTTGGATTAAACTGGTTATTT | + |
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Preference number: 5 (lower is better) Translates to: SAGVSFPSPGQLSAV*RDHQNSSLGLNWLF Trigger: AAATAACCAGTTTAATCCAAGAGATGAATTCTGATGATCCCTTCATACAGCAGAAAGCTGTCCTGGACTCGGAAAAGAAACTCCTGCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS GCA 72 bp | TCTTCAGCAAGGAAGGGGCTGCACTGGGCACTTCCATaGAGTTGCCAAGGCAGAGGGCAGCATTGCCCGCCA | + |
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Preference number: 6 (lower is better) Translates to: SSARKGLHWALP*SCQGRGQHCPP Trigger: TGGCGGGCAATGCTGCCCTCTGCCTTGGCAACTGCATGGAAGTGCCCAGTGCAGCCCCTTCCTTGCTGAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS GCA 72 bp | GCTCTCGCAGTTGGGCAGCAAACCTGGGCTCAGCAGTaGACAGCTTCCCCAGAGCGATGCCTGCATTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: ALAVGQQTWAQQ*TASPERCLHSA Trigger: AGCTGAATGCAGGCATCGCTCTGGGGAAGCTGTGCACTGCTGAGCCCAGGTTTGCTGCCCAACTGCGAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CCA 72 bp | GTATCCCGTGAAGCTCTCGCAGTTGGGCAGCAAACCTaGGCTCAGCAGTGCACAGCTTCCCCAGAGCGATGC | + |
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Preference number: 6 (lower is better) Translates to: VSREALAVGQQT*AQQCTASPERC Trigger: GCATCGCTCTGGGGAAGCTGTGCACTGCTGAGCCCAGGTTTGCTGCCCAACTGCGAGAGCTTCACGGGATAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CAA 90 bp | GCTTCCCCAGAGCGATGCCTGCATTCAGCTGTACGCCTGTCTCCTTaGAGTCGCTGCCTGCCAGCTTCAAGAGCACCCTCACGATGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: ASPERCLHSAVRLSP*SRCLPASRAPSRCP Trigger: CGGACATCGTGAGGGTGCTCTTGAAGCTGGCAGGCAGCGACTCAAAGGAGACAGGCGTACAGCTGAATGCAGGCATCGCTCTGGGGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS TCA 72 bp | ACCACTCCTGCTGTCAGGGCCTCCTCCACAATGGTCTaGGAGGAAGAAAGGGTCCGGCTCAGAACACCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TTPAVRASSTMV*EEERVRLRTPA Trigger: GGCAGGTGTTCTGAGCCGGACCCTTTCTTCCTCTCAGACCATTGTGGAGGAGGCCCTGACAGCAGGAGTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS GCA 72 bp | GCAAGGAAGGGGCTGCACTGGGCACTTCCATGCAGTTaGCAAGGCAGAGGGCAGCATTGCCCGCCAGAATTT | + |
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Preference number: 6 (lower is better) Translates to: ARKGLHWALPCS*QGRGQHCPPEF Trigger: AAATTCTGGCGGGCAATGCTGCCCTCTGCCTTGGCAACTGCATGGAAGTGCCCAGTGCAGCCCCTTCCTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CCA 72 bp | GTCATGAAGGAAGGCAGCAGCCTGGCCATATCAGGGTaGGTCACAAGCAGGCGCTGGTTCTCCTCGTTGTCG | + |
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Preference number: 6 (lower is better) Translates to: VMKEGSSLAISG*VTSRRWFSSLS Trigger: CGACAACGAGGAGAACCAGCGCCTGCTTGTGACCCACCCTGATATGGCCAGGCTGCTGCCTTCCTTCATGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CCA 72 bp | TCACGATGTCCGTCTTCAGCAAGGAAGGGGCTGCACTaGGCACTTCCATGCAGTTGCCAAGGCAGAGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SRCPSSARKGLH*ALPCSCQGRGQ Trigger: CTGCCCTCTGCCTTGGCAACTGCATGGAAGTGCCCAGTGCAGCCCCTTCCTTGCTGAAGACGGACATCGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CAA 72 bp | GGCACTTCCATGCAGTTGCCAAGGCAGAGGGCAGCATaGCCCGCCAGAATTTCATCCTCAGAGGCAAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: GTSMQLPRQRAA*PARISSSEASS Trigger: GCTGCTTGCCTCTGAGGATGAAATTCTGGCGGGCAATGCTGCCCTCTGCCTTGGCAACTGCATGGAAGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CAA 90 bp | GCTGCACTGGGCACTTCCATGCAGTTGCCAAGGCAGAGGGCAGCATaGCCCGCCAGAATTTCATCCTCAGAGGCAAGCAGCAGCATCAAA | + |
|
Preference number: 6 (lower is better) Translates to: AALGTSMQLPRQRAA*PARISSSEASSSIK Trigger: TTTGATGCTGCTGCTTGCCTCTGAGGATGAAATTCTGGCGGGCAATGCTGCCCTCTGCCTTGGCAACTGCATGGAAGTGCCCAGTGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS TCA 72 bp | GGCTGGTTATCTTGGGCTCTCGATTCAGAGCTCCCGTaGGAGCAGGGAGGACATCTGGAAGGTTGGTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GWLSWALDSELP*EQGGHLEGWSG Trigger: TCCAGACCAACCTTCCAGATGTCCTCCCTGCTCTCACGGGAGCTCTGAATCGAGAGCCCAAGATAACCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CAA 72 bp | AGGGCATCTGCCAGGACTCTGTTTTCTCGTCTTCTCTaGGCTCGTTCCTTGGCGTCCTTCTCCACGGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: RASARTLFSRLL*ARSLASFSTDA Trigger: GGCATCCGTGGAGAAGGACGCCAAGGAACGAGCCAAGAGAAGACGAGAAAACAGAGTCCTGGCAGATGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS TCA 72 bp | GGCTCTGCTGTTGAATCACCAGGATTCTGGAAGTCATaGAGGAAGGCAGCAGCCTGGCCATATCAGGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GSAVESPGFWKS*RKAAAWPYQGG Trigger: CCCACCCTGATATGGCCAGGCTGCTGCCTTCCTTCATGACTTCCAGAATCCTGGTGATTCAACAGCAGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS GCA 72 bp | GACAAAGGCCTCGTTCCCCTTCTCCTTCAGGGCATCTaGCAGGACTCTGTTTTCTCGTCTTCTCTTGGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: DKGLVPLLLQGI*QDSVFSSSLGS Trigger: CGAGCCAAGAGAAGACGAGAAAACAGAGTCCTGGCAGATGCCCTGAAGGAGAAGGGGAACGAGGCCTTTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CAA 90 bp | GCATCTGCCAGGACTCTGTTTTCTCGTCTTCTCTTGGCTCGTTCCTaGGCGTCCTTCTCCACGGATGCCAAGAAGGCATCTGGGCTCATT | + |
|
Preference number: 6 (lower is better) Translates to: ASARTLFSRLLLARS*ASFSTDAKKASGLI Trigger: AATGAGCCCAGATGCCTTCTTGGCATCCGTGGAGAAGGACGCCAAGGAACGAGCCAAGAGAAGACGAGAAAACAGAGTCCTGGCAGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CAA 90 bp | TTCTCCTTCAGGGCATCTGCCAGGACTCTGTTTTCTCGTCTTCTCTaGGCTCGTTCCTTGGCGTCCTTCTCCACGGATGCCAAGAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: FSFRASARTLFSRLL*ARSLASFSTDAKKA Trigger: TGCCTTCTTGGCATCCGTGGAGAAGGACGCCAAGGAACGAGCCAAGAGAAGACGAGAAAACAGAGTCCTGGCAGATGCCCTGAAGGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS TCA 72 bp | CCTGGGCTCGGTTGGTGTACAGCACCTTCATGTCCTTaGGCTTCCCCAAGCCCTCACTGTAGAAGAATATGG | + |
|
Preference number: 6 (lower is better) Translates to: PGLGWCTAPSCP*ASPSPHCRRIW Trigger: CCATATTCTTCTACAGTGAGGGCTTGGGGAAGCTCAAGGACATGAAGGTGCTGTACACCAACCGAGCCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CCA 72 bp | CTTGGCGTCCTTCTCCACGGATGCCAAGAAGGCATCTaGGCTCATTTCATCTGCATTCTCGGGAGTTTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LGVLLHGCQEGI*AHFICILGSLW Trigger: CCACAAACTCCCGAGAATGCAGATGAAATGAGCCCAGATGCCTTCTTGGCATCCGTGGAGAAGGACGCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CAA 90 bp | GTCCGGCTCAGAACACCTGCCGCTCTTGTTAAGATTCCTCCATCCTaGCTGTTCAGTAGAGACAGGCACTTCCGGCTCATCTTCACAACC | + |
|
Preference number: 6 (lower is better) Translates to: VRLRTPAALVKIPPS*LFSRDRHFRLIFTT Trigger: GGTTGTGAAGATGAGCCGGAAGTGCCTGTCTCTACTGAACAGCAAGGATGGAGGAATCTTAACAAGAGCGGCAGGTGTTCTGAGCCGGAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS GCA 72 bp | TCTCTTGGCTCGTTCCTTGGCGTCCTTCTCCACGGATaGCAAGAAGGCATCTGGGCTCATTTCATCTGCATT | + |
|
Preference number: 6 (lower is better) Translates to: SLGSFLGVLLHG*QEGIWAHFICI Trigger: AATGCAGATGAAATGAGCCCAGATGCCTTCTTGGCATCCGTGGAGAAGGACGCCAAGGAACGAGCCAAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CCA 72 bp | CCCGTGAGAGCAGGGAGGACATCTGGAAGGTTGGTCTaGAACCAGACTTGGAATCTTTCTTCTAGAGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: PVRAGRTSGRLV*NQTWNLSSRAK Trigger: CTTGGCTCTAGAAGAAAGATTCCAAGTCTGGTTCCAGACCAACCTTCCAGATGTCCTCCCTGCTCTCACGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CAA 72 bp | GGGCCACGTGGGCTTTCCCCATGTGGAAATAGGCCTTaGTACAATTCTCATCACACTTCAGAGCCCAGTCAC | + |
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Preference number: 6 (lower is better) Translates to: GPRGLSPCGNRP*YNSHHTSEPSH Trigger: GTGACTGGGCTCTGAAGTGTGATGAGAATTGTACAAAGGCCTATTTCCACATGGGGAAAGCCCACGTGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CAA 90 bp | TGCCAAGAAGGCATCTGGGCTCATTTCATCTGCATTCTCGGGAGTTaGTGGAGGACTGATCATGGTCTTATTCAGAGTGGTCCTGCACCC | + |
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Preference number: 6 (lower is better) Translates to: CQEGIWAHFICILGS*WRTDHGLIQSGPAP Trigger: GGGTGCAGGACCACTCTGAATAAGACCATGATCAGTCCTCCACAAACTCCCGAGAATGCAGATGAAATGAGCCCAGATGCCTTCTTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CAA 90 bp | TCTCGATTCAGAGCTCCCGTGAGAGCAGGGAGGACATCTGGAAGGTaGGTCTGGAACCAGACTTGGAATCTTTCTTCTAGAGCCAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: SRFRAPVRAGRTSGR*VWNQTWNLSSRAKS Trigger: AGACTTGGCTCTAGAAGAAAGATTCCAAGTCTGGTTCCAGACCAACCTTCCAGATGTCCTCCCTGCTCTCACGGGAGCTCTGAATCGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS GCA 72 bp | CACGGATGCCAAGAAGGCATCTGGGCTCATTTCATCTaGATTCTCGGGAGTTTGTGGAGGACTGATCATGGT | + |
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Preference number: 6 (lower is better) Translates to: HGCQEGIWAHFI*ILGSLWRTDHG Trigger: ACCATGATCAGTCCTCCACAAACTCCCGAGAATGCAGATGAAATGAGCCCAGATGCCTTCTTGGCATCCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CAA 72 bp | AGAGCTCCCGTGAGAGCAGGGAGGACATCTGGAAGGTaGGTCTGGAACCAGACTTGGAATCTTTCTTCTAGA | + |
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Preference number: 6 (lower is better) Translates to: RAPVRAGRTSGR*VWNQTWNLSSR Trigger: TCTAGAAGAAAGATTCCAAGTCTGGTTCCAGACCAACCTTCCAGATGTCCTCCCTGCTCTCACGGGAGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CAA 72 bp | AGAACACCTGCCGCTCTTGTTAAGATTCCTCCATCCTaGCTGTTCAGTAGAGACAGGCACTTCCGGCTCATC | + |
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Preference number: 6 (lower is better) Translates to: RTPAALVKIPPS*LFSRDRHFRLI Trigger: GATGAGCCGGAAGTGCCTGTCTCTACTGAACAGCAAGGATGGAGGAATCTTAACAAGAGCGGCAGGTGTTCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CCA 72 bp | TCTGGCCAGGCTTGGATAGGGTTTCCAGGAGATTTTTaGTCGTCACTGCTGTGTTCTTTCCTGAATCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: SGQAWIGFPGDF*SSLLCSFLNPE Trigger: CTCTGGATTCAGGAAAGAACACAGCAGTGACGACCAAAAATCTCCTGGAAACCCTATCCAAGCCTGGCCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CCA 72 bp | GAGAAGGCAAGAAATGACAGCAGTGCTTCACACAGTTaGGTCATGTCAAGGTGCTTGATCACTTGGTTCCGG | + |
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Preference number: 6 (lower is better) Translates to: EKARNDSSASHS*VMSRCLITWFR Trigger: CCGGAACCAAGTGATCAAGCACCTTGACATGACCCAACTGTGTGAAGCACTGCTGTCATTTCTTGCCTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CAA 72 bp | GTCTGGCCAGGCTTGGATAGGGTTTCCAGGAGATTTTaGGTCGTCACTGCTGTGTTCTTTCCTGAATCCAGA | + |
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Preference number: 6 (lower is better) Translates to: VWPGLDRVSRRF*VVTAVFFPESR Trigger: TCTGGATTCAGGAAAGAACACAGCAGTGACGACCAAAAATCTCCTGGAAACCCTATCCAAGCCTGGCCAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CAA 90 bp | AGTTCTTCAGGGCCACGTGGGCTTTCCCCATGTGGAAATAGGCCTTaGTACAATTCTCATCACACTTCAGAGCCCAGTCACAATCCACAA | + |
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Preference number: 6 (lower is better) Translates to: SSSGPRGLSPCGNRP*YNSHHTSEPSHNPQ Trigger: TTGTGGATTGTGACTGGGCTCTGAAGTGTGATGAGAATTGTACAAAGGCCTATTTCCACATGGGGAAAGCCCACGTGGCCCTGAAGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CAA 90 bp | AACAAGGGTGTCTGGCCAGGCTTGGATAGGGTTTCCAGGAGATTTTaGGTCGTCACTGCTGTGTTCTTTCCTGAATCCAGAGATTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: NKGVWPGLDRVSRRF*VVTAVFFPESRDSW Trigger: CCAAGAATCTCTGGATTCAGGAAAGAACACAGCAGTGACGACCAAAAATCTCCTGGAAACCCTATCCAAGCCTGGCCAGACACCCTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS TCA 72 bp | AAGTGTTTCATTGTAGAGTTGAGAACTTGTATCCCGTaGAGCTCTCGCAGTTGGGCAGCAAACCTGGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: KCFIVELRTCIP*SSRSWAANLGS Trigger: TGAGCCCAGGTTTGCTGCCCAACTGCGAGAGCTTCACGGGATACAAGTTCTCAACTCTACAATGAAACACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS GCA 72 bp | CATCCTCAGGAATTTAATCATTTTCTTGACCACTCCTaGTGTCAGGGCCTCCTCCACAATGGTCTGAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: HPQEFNHFLDHS*CQGLLHNGLRG Trigger: TCCTCTCAGACCATTGTGGAGGAGGCCCTGACAGCAGGAGTGGTCAAGAAAATGATTAAATTCCTGAGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CAA 72 bp | GGCATCTGGGCTCATTTCATCTGCATTCTCGGGAGTTaGTGGAGGACTGATCATGGTCTTATTCAGAGTGGT | + |
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Preference number: 6 (lower is better) Translates to: GIWAHFICILGS*WRTDHGLIQSG Trigger: ACCACTCTGAATAAGACCATGATCAGTCCTCCACAAACTCCCGAGAATGCAGATGAAATGAGCCCAGATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS TCA 72 bp | GGCTGTATTGGCCTTCTTATCAGAGAAGGCAAGAAATaGCAGCAGTGCTTCACACAGTTGGGTCATGTCAAG | + |
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Preference number: 6 (lower is better) Translates to: GCIGLLIREGKK*QQCFTQLGHVK Trigger: CTTGACATGACCCAACTGTGTGAAGCACTGCTGTCATTTCTTGCCTTCTCTGATAAGAAGGCCAATACAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS TCA 72 bp | GTTCGTGCAGATAGCCAGTATCTTTATGGCGTAACGTaGTGCAGTCTGGCCTCCCATCCTCAGGAATTTAAT | + |
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Preference number: 6 (lower is better) Translates to: VRADSQYLYGVT*CSLASHPQEFN Trigger: ATTAAATTCCTGAGGATGGGAGGCCAGACTGCATCACGTTACGCCATAAAGATACTGGCTATCTGCACGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CCA 72 bp | ATCTGGGCTCATTTCATCTGCATTCTCGGGAGTTTGTaGAGGACTGATCATGGTCTTATTCAGAGTGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: IWAHFICILGSL*RTDHGLIQSGP Trigger: AGGACCACTCTGAATAAGACCATGATCAGTCCTCCACAAACTCCCGAGAATGCAGATGAAATGAGCCCAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CAA 72 bp | GTGATCTCTCTGAATAAGTCCATGTCCTCTTCACACTaGACCAGGAGGTCCAAGCAGGCATTCCCAAATTCT | + |
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Preference number: 6 (lower is better) Translates to: VISLNKSMSSSH*TRRSKQAFPNS Trigger: AGAATTTGGGAATGCCTGCTTGGACCTCCTGGTCAAGTGTGAAGAGGACATGGACTTATTCAGAGAGATCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS GCA 72 bp | AGCAGGAGTTTCTTTTCCGAGTCCAGGACAGCTTTCTaGTGTATGAAGGGATCATCAGAATTCATCTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: SRSFFSESRTAF*CMKGSSEFISW Trigger: CCAAGAGATGAATTCTGATGATCCCTTCATACAGCAGAAAGCTGTCCTGGACTCGGAAAAGAAACTCCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CAA 72 bp | TCTAGAGCCAAGTCTGTGAGTATTCCGATGGCTGTATaGGCCTTCTTATCAGAGAAGGCAAGAAATGACAGC | + |
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Preference number: 6 (lower is better) Translates to: SRAKSVSIPMAV*AFLSEKARNDS Trigger: GCTGTCATTTCTTGCCTTCTCTGATAAGAAGGCCAATACAGCCATCGGAATACTCACAGACTTGGCTCTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS TCA 72 bp | ACCAGACTTGGAATCTTTCTTCTAGAGCCAAGTCTGTaGGTATTCCGATGGCTGTATTGGCCTTCTTATCAG | + |
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Preference number: 6 (lower is better) Translates to: TRLGIFLLEPSL*VFRWLYWPSYQ Trigger: CTGATAAGAAGGCCAATACAGCCATCGGAATACTCACAGACTTGGCTCTAGAAGAAAGATTCCAAGTCTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CCA 72 bp | AAATTCTTCATGAGCTATCATGTGTTTTCTGGCAGTTaGCTCAGCGCTGATGTTTCCCAACAGAGCAATGCA | + |
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Preference number: 6 (lower is better) Translates to: KFFMSYHVFSGS*LSADVSQQSNA Trigger: TGCATTGCTCTGTTGGGAAACATCAGCGCTGAGCCAACTGCCAGAAAACACATGATAGCTCATGAAGAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CAA 90 bp | AATCTTTCTTCTAGAGCCAAGTCTGTGAGTATTCCGATGGCTGTATaGGCCTTCTTATCAGAGAAGGCAAGAAATGACAGCAGTGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: NLSSRAKSVSIPMAV*AFLSEKARNDSSAS Trigger: TGAAGCACTGCTGTCATTTCTTGCCTTCTCTGATAAGAAGGCCAATACAGCCATCGGAATACTCACAGACTTGGCTCTAGAAGAAAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS TCA 72 bp | TTTTTATCAAGTCTCACTACTTCTTCCCGAGCTGCATaGCAGCTGTTCGTGCAGATAGCCAGTATCTTTATG | + |
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Preference number: 6 (lower is better) Translates to: FLSSLTTSSRAA*QLFVQIASIFM Trigger: CATAAAGATACTGGCTATCTGCACGAACAGCTGTCATGCAGCTCGGGAAGAAGTAGTGAGACTTGATAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS GCA 72 bp | AAACTTTTTATCAAGTCTCACTACTTCTTCCCGAGCTaGATGACAGCTGTTCGTGCAGATAGCCAGTATCTT | + |
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Preference number: 6 (lower is better) Translates to: KLFIKSHYFFPS*MTAVRADSQYL Trigger: AAGATACTGGCTATCTGCACGAACAGCTGTCATGCAGCTCGGGAAGAAGTAGTGAGACTTGATAAAAAGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CAA 72 bp | AGAATCATTCAAGTGTTTCATTGTAGAGTTGAGAACTaGTATCCCGTGAAGCTCTCGCAGTTGGGCAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: RIIQVFHCRVEN*YPVKLSQLGSK Trigger: TTTGCTGCCCAACTGCGAGAGCTTCACGGGATACAAGTTCTCAACTCTACAATGAAACACTTGAATGATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS TCA 72 bp | GTTTCTTTTCCGAGTCCAGGACAGCTTTCTGCTGTATaGAGGGATCATCAGAATTCATCTCTTGGATTAAAC | + |
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Preference number: 6 (lower is better) Translates to: VSFPSPGQLSAV*RDHQNSSLGLN Trigger: GTTTAATCCAAGAGATGAATTCTGATGATCCCTTCATACAGCAGAAAGCTGTCCTGGACTCGGAAAAGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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| CDS CCA 72 bp | CTTGATTTAGGTGTTCTTTCACCTGTGCCTTCAGCTTaGGGTTTATCTCTTCAATCTTCTGATAACATTCTT | + |
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Preference number: 6 (lower is better) Translates to: LDLGVLSPVPSA*GLSLQSSDNIL Trigger: AAGAATGTTATCAGAAGATTGAAGAGATAAACCCCAAGCTGAAGGCACAGGTGAAAGAACACCTAAATCAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055096.5 |
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