Pregenerated sensors for TTC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041278Ensembl transcript IDs: ENSMUST00000048578.3, ENSMUST00000109278.8
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGGGGACCCTGTCCATATGTATGGTCATCACTCAACTACAGGCTTaGATGGTTACAGGAGGTTTTTGGTGGCTAGCACATCTGTGCGGC | + |
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Preference number: 1 (lower is better) Translates to: EGTLSICMVITQLQA*MVTGGFWWLAHLCG Trigger: GCCGCACAGATGTGCTAGCCACCAAAAACCTCCTGTAACCATGCAAGCCTGTAGTTGAGTGATGACCATACATATGGACAGGGTCCCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| 3UTR TCA 90 bp | ATGCAGCCTACACAGACAGGCTGTTTGGAGACAAACCATTCTGAATaGTGGCATTTTAAGCTGAGATTAGCACTGATGCTTGGTCAGAAC | + |
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Preference number: 1 (lower is better) Translates to: MQPTQTGCLETNHSE*WHFKLRLALMLGQN Trigger: GTTCTGACCAAGCATCAGTGCTAATCTCAGCTTAAAATGCCATCATTCAGAATGGTTTGTCTCCAAACAGCCTGTCTGTGTAGGCTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109278.8 |
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| 3UTR-3UTR TCA 90 bp | GAACTCAAGAATGCTGAAGCCCCTGCACTGCAGCATCTGAGCAAGTGTGAGCAGCTAAGAGGTCAGCTTTaGCAAGCAGGCTTCTCCACC | + |
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Preference number: 2 (lower is better) Translates to: ELKNAEAPALQHLSKCEQLRGQL*QAGFST Trigger: GGTGGAGAAGCCTGCTTGTCAAAGCTGACCTCTTAG...CTGCTCACACTTGCTCAGATGCTGCAGTGCAGGGGCTTCAGCATTCTTGAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| 3UTR CAA 90 bp | GGTTTTTGGTGGCTAGCACATCTGTGCGGCTCTAAGAGGTCAGCTTaGACAAGCAGGCTTCTCCACCAGACAGAAAACAGCCAGAACCAG | + |
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Preference number: 2 (lower is better) Translates to: GFWWLAHLCGSKRSA*TSRLLHQTENSQNQ Trigger: CTGGTTCTGGCTGTTTTCTGTCTGGTGGAGAAGCCTGCTTGTCAAAGCTGACCTCTTAGAGCCGCACAGATGTGCTAGCCACCAAAAACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGGTTTTTGGTGGCTAGCACATCTGTGCGGCTCTAAGAGGTCAGCTTTGACAAACCAGGGACACGGCTaGACAGACACCACCTTAAAA | + |
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Preference number: 2 (lower is better) Translates to: GGFWWLAHLCGSKRSALTNQGHG*TDTTLK Trigger: TTTTAAGGTGGTGTCTGTGCAGCCGTGTCCCTGGTT...TGTCAAAGCTGACCTCTTAGAGCCGCACAGATGTGCTAGCCACCAAAAACCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| 3UTR-3UTR GCA 90 bp | ATGGTTACAGGAGGTTTTTGGTGGCTAGCACATCTGTGCGGCTCTAAGAGGTCAAACCAGGGACACGGCTaGACAGACACCACCTTAAAA | + |
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Preference number: 2 (lower is better) Translates to: MVTGGFWWLAHLCGSKRSNQGHG*TDTTLK Trigger: TTTTAAGGTGGTGTCTGTGCAGCCGTGTCCCTGGTT...TGACCTCTTAGAGCCGCACAGATGTGCTAGCCACCAAAAACCTCCTGTAACCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| 3UTR-3UTR GCA 90 bp | TTGACAAGCAGGCTTCTCCACCAGACAGAAAACAGCCAGAACCAGGGACACGGCACTCAACTACAGGCTTaGATGGTTACAGGAGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: LTSRLLHQTENSQNQGHGTQLQA*MVTGGF Trigger: AAAACCTCCTGTAACCATGCAAGCCTGTAGTTGAGT...GCCGTGTCCCTGGTTCTGGCTGTTTTCTGTCTGGTGGAGAAGCCTGCTTGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| 3UTR-3UTR CCA 90 bp | GACAGAAAACAGCCAGAACCAGGGACACGGCTGCACAGACACCACCTTAAAATGCTTGTGAACAGTTCATaGCCTCCCAGTCAGCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: DRKQPEPGTRLHRHHLKMLVNSS*PPSQPL Trigger: TAAAGGCTGACTGGGAGGCCATGAACTGTTCACAAG...CATTTTAAGGTGGTGTCTGTGCAGCCGTGTCCCTGGTTCTGGCTGTTTTCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| 3UTR-3UTR TCA 90 bp | ACGCACATAAGTTCTAGAACAGTTGTCACACACAGCTCACAAAATAACATGGCAGCATCTGAGCAAGTGTaGGCAGGGAGGGACAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: THISSRTVVTHSSQNNMAASEQV*AGRDSR Trigger: CCTGCTGTCCCTCCCTGCTCACACTTGCTCAGATGC...TGCCATGTTATTTTGTGAGCTGTGTGTGACAACTGTTCTAGAACTTATGTGCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109278.8 |
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| 3UTR-3UTR CCA 90 bp | AGCAGGCTTCTCCACCAGACAGAAAACAGCCAGAACCAGGGACACGGCTGCACAGACACCACCTTAAAATaGAAATTAATGAGGCTCATA | + |
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Preference number: 2 (lower is better) Translates to: SRLLHQTENSQNQGHGCTDTTLK*KLMRLI Trigger: TATGAGCCTCATTAATTTCCATTTTAAGGTGGTGTC...TGTGCAGCCGTGTCCCTGGTTCTGGCTGTTTTCTGTCTGGTGGAGAAGCCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| 3UTR-3UTR CCA 90 bp | CTGACTCAGCTGCCCTGTGAAGCAGGAGTCTTCAATTCTGGCACACTGATCGGTGATGGAAACCAGAACTaGTTCCAAATGTCATATAGA | + |
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Preference number: 2 (lower is better) Translates to: LTQLPCEAGVFNSGTLIGDGNQN*FQMSYR Trigger: TCTATATGACATTTGGAACCAGTTCTGGTTTCCATC...ACCGATCAGTGTGCCAGAATTGAAGACTCCTGCTTCACAGGGCAGCTGAGTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109278.8 |
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| 3UTR-3UTR CCA 90 bp | ATTAACAACATAGTCCCCAACTGTCACAGGATGTTTTTATTAACACGGAGGAACGAATCCTGCTTGATCTaGAAATTTTCTGTGGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: INNIVPNCHRMFLLTRRNESCLI*KFSVES Trigger: GCTCTCCACAGAAAATTTCCAGATCAAGCAGGATTC...GTTCCTCCGTGTTAATAAAAACATCCTGTGACAGTTGGGGACTATGTTGTTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109278.8 |
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| 3UTR CCA 72 bp | GGGAGGGACAGCAGGAGGGGACCCTGTCCATATGTATaGTCATCACTCAACTACAGGCTTGCATGGTTACAG | + |
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Preference number: 3 (lower is better) Translates to: GRDSRRGPCPYV*SSLNYRLAWLQ Trigger: CTGTAACCATGCAAGCCTGTAGTTGAGTGATGACCATACATATGGACAGGGTCCCCTCCTGCTGTCCCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| 3UTR CCA 72 bp | CAACTACAGGCTTGCATGGTTACAGGAGGTTTTTGGTaGCTAGCACATCTGTGCGGCTCTAAGAGGTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: QLQACMVTGGFW*LAHLCGSKRSA Trigger: AGCTGACCTCTTAGAGCCGCACAGATGTGCTAGCCACCAAAAACCTCCTGTAACCATGCAAGCCTGTAGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| 3UTR GCA 72 bp | ATGGTTACAGGAGGTTTTTGGTGGCTAGCACATCTGTaGGGCTCTAAGAGGTCAGCTTTGACAAGCAGGCTT | + |
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Preference number: 3 (lower is better) Translates to: MVTGGFWWLAHL*GSKRSALTSRL Trigger: AAGCCTGCTTGTCAAAGCTGACCTCTTAGAGCCGCACAGATGTGCTAGCCACCAAAAACCTCCTGTAACCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| 3UTR CCA 72 bp | ACTCAACTACAGGCTTGCATGGTTACAGGAGGTTTTTaGTGGCTAGCACATCTGTGCGGCTCTAAGAGGTCA | + |
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Preference number: 3 (lower is better) Translates to: TQLQACMVTGGF*WLAHLCGSKRS Trigger: TGACCTCTTAGAGCCGCACAGATGTGCTAGCCACCAAAAACCTCCTGTAACCATGCAAGCCTGTAGTTGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| 3UTR CCA 72 bp | ACTGATGCTTGGTCAGAACCGCTAATTTCACAAAACTaGAGACTGACTCAGCTGCCCTGTGAAGCAGGAGTC | + |
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Preference number: 3 (lower is better) Translates to: TDAWSEPLISQN*RLTQLPCEAGV Trigger: GACTCCTGCTTCACAGGGCAGCTGAGTCAGTCTCCAGTTTTGTGAAATTAGCGGTTCTGACCAAGCATCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109278.8 |
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| 3UTR TCA 72 bp | AATTTCACAAAACTGGAGACTGACTCAGCTGCCCTGTaGAGCAGGAGTCTTCAATTCTGGCACACTGATCGG | + |
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Preference number: 3 (lower is better) Translates to: NFTKLETDSAAL*SRSLQFWHTDR Trigger: CCGATCAGTGTGCCAGAATTGAAGACTCCTGCTTCACAGGGCAGCTGAGTCAGTCTCCAGTTTTGTGAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109278.8 |
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| 3UTR-3UTR CAA 90 bp | TGGCTAGCACATCTGTGCGGCTCTAAGAGGTCAGCTTTGACAAGCAGGCTTCTCGTAGAAGAATCCTGCTaGATCTGGAAATTTTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: WLAHLCGSKRSALTSRLLVEESC*IWKFSV Trigger: CACAGAAAATTTCCAGATCAAGCAGGATTCTTCTAC...GAGAAGCCTGCTTGTCAAAGCTGACCTCTTAGAGCCGCACAGATGTGCTAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109278.8 |
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| 3UTR TCA 72 bp | TGCCCTGTGAAGCAGGAGTCTTCAATTCTGGCACACTaGTCGGTTATTCAAGGGAGAGTCAAGCAGCAAAAA | + |
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Preference number: 3 (lower is better) Translates to: CPVKQESSILAH*SVIQGRVKQQK Trigger: TTTTTGCTGCTTGACTCTCCCTTGAATAACCGATCAGTGTGCCAGAATTGAAGACTCCTGCTTCACAGGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109278.8 |
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| 3UTR CCA 72 bp | AACCAGGGACACGGCTGCACAGACACCACCTTAAAATaGAAATTAATGAGGCTCATACATCAGGAGGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: NQGHGCTDTTLK*KLMRLIHQEAH Trigger: ATGTGCCTCCTGATGTATGAGCCTCATTAATTTCCATTTTAAGGTGGTGTCTGTGCAGCCGTGTCCCTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| 3UTR GCA 72 bp | CTGTCCATATGTATGGTCATCACTCAACTACAGGCTTaGATGGTTACAGGAGGTTTTTGGTGGCTAGCACAT | + |
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Preference number: 3 (lower is better) Translates to: LSICMVITQLQA*MVTGGFWWLAH Trigger: ATGTGCTAGCCACCAAAAACCTCCTGTAACCATGCAAGCCTGTAGTTGAGTGATGACCATACATATGGACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| 3UTR CCA 72 bp | GGCTTCAGAATCAGTGACCTCGATGGAAACCAGAACTaGTTCCAAATGTCATATAGAATCTGCTTCAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: GFRISDLDGNQN*FQMSYRICFSC Trigger: GCAGCTGAAGCAGATTCTATATGACATTTGGAACCAGTTCTGGTTTCCATCGAGGTCACTGATTCTGAAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109278.8 |
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| 3UTR CCA 72 bp | TCAAGGGAGAGTCAAGCAGCAAAAACTTTAGCTTTGTaGGCTTCAGAATCAGTGACCTCGATGGAAACCAGA | + |
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Preference number: 3 (lower is better) Translates to: SRESQAAKTLAL*ASESVTSMETR Trigger: TCTGGTTTCCATCGAGGTCACTGATTCTGAAGCCCACAAAGCTAAAGTTTTTGCTGCTTGACTCTCCCTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109278.8 |
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| 3UTR CCA 72 bp | CTAGAACAGTTGTCACACACAGCTCACAAAATAACATaGCAGCTCATCTGCAAAATAAGGCACACATGTCAC | + |
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Preference number: 3 (lower is better) Translates to: LEQLSHTAHKIT*QLICKIRHTCH Trigger: GTGACATGTGTGCCTTATTTTGCAGATGAGCTGCCATGTTATTTTGTGAGCTGTGTGTGACAACTGTTCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109278.8 |
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| CDS-3UTR GCA 90 bp | CAGGCTTCTCCACCAGACAGAAAACAGCCAGAACCAGGGACACGGCTGCACAGACAGCCTTCGGCAGCTTaGTCTGGCAGTGCTGACCCT | + |
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Preference number: 4 (lower is better) Translates to: QASPPDRKQPEPGTRLHRQPSAA*SGSADP Trigger: AGGGTCAGCACTGCCAGAGCAAGCTGCCGAAGGCTG...TCTGTGCAGCCGTGTCCCTGGTTCTGGCTGTTTTCTGTCTGGTGGAGAAGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS-3UTR GCA 90 bp | TGGCTAGCACATCTGTGCGGCTCTAAGAGGTCAGCTTTGACAAGCAGGCTTCTCTTGCTCCCTGCCACGTaGGCCCCTGGCTGTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: WLAHLCGSKRSALTSRLLLLPAT*APGCSS Trigger: GGAGGAACAGCCAGGGGCGCACGTGGCAGGGAGCAA...GAGAAGCCTGCTTGTCAAAGCTGACCTCTTAGAGCCGCACAGATGTGCTAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS-3UTR GCA 90 bp | TTGACAAGCAGGCTTCTCCACCAGACAGAAAACAGCCAGAACCAGGGACACGGCCAGCCTTCGGCAGCTTaGTCTGGCAGTGCTGACCCT | + |
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Preference number: 4 (lower is better) Translates to: LTSRLLHQTENSQNQGHGQPSAA*SGSADP Trigger: AGGGTCAGCACTGCCAGAGCAAGCTGCCGAAGGCTG...GCCGTGTCCCTGGTTCTGGCTGTTTTCTGTCTGGTGGAGAAGCCTGCTTGTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS-3UTR GCA 90 bp | TGCATGGTTACAGGAGGTTTTTGGTGGCTAGCACATCTGTGCGGCTCTAAGAGGTTGCTCCCTGCCACGTaGGCCCCTGGCTGTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: CMVTGGFWWLAHLCGSKRLLPAT*APGCSS Trigger: GGAGGAACAGCCAGGGGCGCACGTGGCAGGGAGCAA...CCTCTTAGAGCCGCACAGATGTGCTAGCCACCAAAAACCTCCTGTAACCATGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS-3UTR TCA 90 bp | GACAGAAAACAGCCAGAACCAGGGACACGGCTGCACAGACACCACCTTAAAATGTTGCTCTGGCAGTGCTaGCCCTTGGGATCAGAAACC | + |
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Preference number: 4 (lower is better) Translates to: DRKQPEPGTRLHRHHLKMLLWQC*PLGSET Trigger: GGTTTCTGATCCCAAGGGTCAGCACTGCCAGAGCAA...CATTTTAAGGTGGTGTCTGTGCAGCCGTGTCCCTGGTTCTGGCTGTTTTCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS-3UTR TCA 90 bp | AGCTTTGACAAGCAGGCTTCTCCACCAGACAGAAAACAGCCAGAACCAGGGACATTGCTCTGGCAGTGCTaGCCCTTGGGATCAGAAACC | + |
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Preference number: 4 (lower is better) Translates to: SFDKQASPPDRKQPEPGTLLWQC*PLGSET Trigger: GGTTTCTGATCCCAAGGGTCAGCACTGCCAGAGCAA...TGTCCCTGGTTCTGGCTGTTTTCTGTCTGGTGGAGAAGCCTGCTTGTCAAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS-3UTR TCA 90 bp | CTGACTCAGCTGCCCTGTGAAGCAGGAGTCTTCAATTCTGGCACACTGATCGGTCTTTGCTGCAGTCAGTaGTGGCCGTCTCCTTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: LTQLPCEAGVFNSGTLIGLCCSQ*WPSPSC Trigger: ACAAGAAGGAGACGGCCATCACTGACTGCAGCAAAG...ACCGATCAGTGTGCCAGAATTGAAGACTCCTGCTTCACAGGGCAGCTGAGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109278.8 |
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| 3UTR CAA 72 bp | TGGCTAGCACATCTGTGCGGCTCTAAGAGGTCAGCTTaGACAAGCAGGCTTCTCCACCAGACAGAAAACAGC | + |
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Preference number: 4 (lower is better) Translates to: WLAHLCGSKRSA*TSRLLHQTENS Trigger: GCTGTTTTCTGTCTGGTGGAGAAGCCTGCTTGTCAAAGCTGACCTCTTAGAGCCGCACAGATGTGCTAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS-3UTR TCA 90 bp | AGCAGGCTTCTCCACCAGACAGAAAACAGCCAGAACCAGGGACACGGCTGCACACGCAGCAGCTCTATTTaGAAACAGAACAGATCGATC | + |
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Preference number: 4 (lower is better) Translates to: SRLLHQTENSQNQGHGCTRSSSI*KQNRSI Trigger: GATCGATCTGTTCTGTTTTCAAATAGAGCTGCTGCG...TGTGCAGCCGTGTCCCTGGTTCTGGCTGTTTTCTGTCTGGTGGAGAAGCCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS-3UTR TCA 90 bp | AGCTTTGACAAGCAGGCTTCTCCACCAGACAGAAAACAGCCAGAACCAGGGACACTTTGCTGCAGTCAGTaGTGGCCGTCTCCTTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: SFDKQASPPDRKQPEPGTLCCSQ*WPSPSC Trigger: ACAAGAAGGAGACGGCCATCACTGACTGCAGCAAAG...TGTCCCTGGTTCTGGCTGTTTTCTGTCTGGTGGAGAAGCCTGCTTGTCAAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS-3UTR TCA 90 bp | TGGCTAGCACATCTGTGCGGCTCTAAGAGGTCAGCTTTGACAAGCAGGCTTCTCCGACTTTCAGACCATTaGACAGATCTTCTGGGACCT | + |
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Preference number: 4 (lower is better) Translates to: WLAHLCGSKRSALTSRLLRLSDH*TDLLGP Trigger: AGGTCCCAGAAGATCTGTTCAATGGTCTGAAAGTCG...GAGAAGCCTGCTTGTCAAAGCTGACCTCTTAGAGCCGCACAGATGTGCTAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS-3UTR TCA 90 bp | ACAGGAGGTTTTTGGTGGCTAGCACATCTGTGCGGCTCTAAGAGGTCAGCTTTGCGACTTTCAGACCATTaGACAGATCTTCTGGGACCT | + |
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Preference number: 4 (lower is better) Translates to: TGGFWWLAHLCGSKRSALRLSDH*TDLLGP Trigger: AGGTCCCAGAAGATCTGTTCAATGGTCTGAAAGTCG...CAAAGCTGACCTCTTAGAGCCGCACAGATGTGCTAGCCACCAAAAACCTCCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS-3UTR CCA 90 bp | AGAAAACAGCCAGAACCAGGGACACGGCTGCACAGACACCACCTTAAAATGGAATTTCTGGAAACAGGCTaGGCACATCTGAAGGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: RKQPEPGTRLHRHHLKMEFLETG*AHLKGL Trigger: CAAGCCCTTCAGATGTGCCCAGCCTGTTTCCAGAAA...TTCCATTTTAAGGTGGTGTCTGTGCAGCCGTGTCCCTGGTTCTGGCTGTTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS-3UTR CCA 90 bp | GCACATCTGTGCGGCTCTAAGAGGTCAGCTTTGACAAGCAGGCTTCTCCACCAGGAATCCTGCTTGATCTaGAAATTTTCTGTGGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: AHLCGSKRSALTSRLLHQESCLI*KFSVES Trigger: GCTCTCCACAGAAAATTTCCAGATCAAGCAGGATTC...CTGGTGGAGAAGCCTGCTTGTCAAAGCTGACCTCTTAGAGCCGCACAGATGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048578.3 |
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| CDS-3UTR TCA 90 bp | GAACTCAAGAATGCTGAAGCCCCTGCACTGCAGCATCTGAGCAAGTGTGAGCAGGAGGCACTACAGTCATaGAAACATTCCTCTTCAACA | + |
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Preference number: 4 (lower is better) Translates to: ELKNAEAPALQHLSKCEQEALQS*KHSSST Trigger: TGTTGAAGAGGAATGTTTTCATGACTGTAGTGCCTC...CTGCTCACACTTGCTCAGATGCTGCAGTGCAGGGGCTTCAGCATTCTTGAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS-3UTR GCA 90 bp | AGCAGGCTTCTCCACCAGACAGAAAACAGCCAGAACCAGGGACACGGCTGCACACCAGTAGAAGAATCCTaGTTGATCTGGAAATTTTCT | + |
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Preference number: 4 (lower is better) Translates to: SRLLHQTENSQNQGHGCTPVEES*LIWKFS Trigger: AGAAAATTTCCAGATCAAGCAGGATTCTTCTACTGG...TGTGCAGCCGTGTCCCTGGTTCTGGCTGTTTTCTGTCTGGTGGAGAAGCCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048578.3 |
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| CDS-3UTR TCA 90 bp | TTTGACAAGCAGGCTTCTCCACCAGACAGAAAACAGCCAGAACCAGGGACACGGCAAGCTTCTCTTGCTTaGTGTACTGATGGATCTTTT | + |
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Preference number: 4 (lower is better) Translates to: FDKQASPPDRKQPEPGTRQASLA*CTDGSF Trigger: AAAAGATCCATCAGTACATCAAGCAAGAGAAGCTTG...CCGTGTCCCTGGTTCTGGCTGTTTTCTGTCTGGTGGAGAAGCCTGCTTGTCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS-3UTR GCA 90 bp | TGGCTAGCACATCTGTGCGGCTCTAAGAGGTCAGCTTTGACAAGCAGGCTTCTCGTCGCAGAACCAAGTTaGCAAGATCTTTTAGTTTAC | + |
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Preference number: 4 (lower is better) Translates to: WLAHLCGSKRSALTSRLLVAEPS*QDLLVY Trigger: GTAAACTAAAAGATCTTGGCAACTTGGTTCTGCGAC...GAGAAGCCTGCTTGTCAAAGCTGACCTCTTAGAGCCGCACAGATGTGCTAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048578.3 |
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| CDS-3UTR CCA 90 bp | GGAGCCAGTAGAAGAATCCTGCTTGATCTGGAAATTTTCTGTGGAGAGCCCAAATTTCTGGAAACAGGCTaGGCACATCTGAAGGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: GASRRILLDLEIFCGEPKFLETG*AHLKGL Trigger: CAAGCCCTTCAGATGTGCCCAGCCTGTTTCCAGAAA...TTTGGGCTCTCCACAGAAAATTTCCAGATCAAGCAGGATTCTTCTACTGGCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109278.8 |
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| CDS-3UTR TCA 90 bp | ACAGAAAACAGCCAGAACCAGGGACACGGCTGCACAGACACCACCTTAAAATGGCAAGCTTCTCTTGCTTaGTGTACTGATGGATCTTTT | + |
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Preference number: 4 (lower is better) Translates to: TENSQNQGHGCTDTTLKWQASLA*CTDGSF Trigger: AAAAGATCCATCAGTACATCAAGCAAGAGAAGCTTG...CCATTTTAAGGTGGTGTCTGTGCAGCCGTGTCCCTGGTTCTGGCTGTTTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS-3UTR TCA 90 bp | GGAGTAGGAGCCAGTAGAAGAATCCTGCTTGATCTGGAAATTTTCTGTGGAGAGCGCAGCAGCTCTATTTaGAAACAGAACAGATCGATC | + |
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Preference number: 4 (lower is better) Translates to: GVGASRRILLDLEIFCGERSSSI*KQNRSI Trigger: GATCGATCTGTTCTGTTTTCAAATAGAGCTGCTGCG...CTCTCCACAGAAAATTTCCAGATCAAGCAGGATTCTTCTACTGGCTCCTACTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109278.8 |
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| 3UTR CAA 72 bp | TATTCAAGGGAGAGTCAAGCAGCAAAAACTTTAGCTTaGTGGGCTTCAGAATCAGTGACCTCGATGGAAACC | + |
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Preference number: 4 (lower is better) Translates to: YSRESQAAKTLA*WASESVTSMET Trigger: GGTTTCCATCGAGGTCACTGATTCTGAAGCCCACAAAGCTAAAGTTTTTGCTGCTTGACTCTCCCTTGAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109278.8 |
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| CDS-3UTR CAA 90 bp | AGCAGGCTTCTCCACCAGACAGAAAACAGCCAGAACCAGGGACACGGCTGCACAATGGCCGTCTCCTTCTaGTCCTGTTTCATCCTCGCA | + |
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Preference number: 5 (lower is better) Translates to: SRLLHQTENSQNQGHGCTMAVSF*SCFILA Trigger: TGCGAGGATGAAACAGGACAAGAAGGAGACGGCCAT...TGTGCAGCCGTGTCCCTGGTTCTGGCTGTTTTCTGTCTGGTGGAGAAGCCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS GCA 90 bp | TTCTTCATCCAGTTCAGAACTAGAATCATCGCTGGCTTTGCTCCCTaGCACGTGCGCCCCTGGCTGTTCCTCCTCAAACGAGGCACTACA | + |
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Preference number: 5 (lower is better) Translates to: FFIQFRTRIIAGFAP*HVRPWLFLLKRGTT Trigger: TGTAGTGCCTCGTTTGAGGAGGAACAGCCAGGGGCGCACGTGGCAGGGAGCAAAGCCAGCGATGATTCTAGTTCTGAACTGGATGAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS TCA 90 bp | ACGTGCGCCCCTGGCTGTTCCTCCTCAAACGAGGCACTACAGTCATaGAAACATTCCTCTTCAACATGGTCGTCCTGTGGATGGGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: TCAPGCSSSNEALQS*KHSSSTWSSCGWAS Trigger: TGAAGCCCATCCACAGGACGACCATGTTGAAGAGGAATGTTTTCATGACTGTAGTGCCTCGTTTGAGGAGGAACAGCCAGGGGCGCACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS-3UTR CAA 90 bp | TTGACAAGCAGGCTTCTCCACCAGACAGAAAACAGCCAGAACCAGGGACACGGCGCGACTTTCAGACCATaGAACAGATCTTCTGGGACC | + |
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Preference number: 5 (lower is better) Translates to: LTSRLLHQTENSQNQGHGATFRP*NRSSGT Trigger: GGTCCCAGAAGATCTGTTCAATGGTCTGAAAGTCGC...GCCGTGTCCCTGGTTCTGGCTGTTTTCTGTCTGGTGGAGAAGCCTGCTTGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS TCA 90 bp | GGCCGTCTCCTTCTTGTCCTGTTTCATCCTCGCAGCAGCTCTATTTaGAAACAGAACAGATCGATCTTTCTGGAAACAGGCTGGGCACAT | + |
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Preference number: 5 (lower is better) Translates to: GRLLLVLFHPRSSSI*KQNRSIFLETGWAH Trigger: ATGTGCCCAGCCTGTTTCCAGAAAGATCGATCTGTTCTGTTTTCAAATAGAGCTGCTGCGAGGATGAAACAGGACAAGAAGGAGACGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS-3UTR CAA 90 bp | TGGCTAGCACATCTGTGCGGCTCTAAGAGGTCAGCTTTGACAAGCAGGCTTCTCTCGCAGCAGCTCTATTaGAAAACAGAACAGATCGAT | + |
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Preference number: 5 (lower is better) Translates to: WLAHLCGSKRSALTSRLLSQQLY*KTEQID Trigger: ATCGATCTGTTCTGTTTTCAAATAGAGCTGCTGCGA...GAGAAGCCTGCTTGTCAAAGCTGACCTCTTAGAGCCGCACAGATGTGCTAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS-3UTR CAA 90 bp | GACAGAAAACAGCCAGAACCAGGGACACGGCTGCACAGACACCACCTTAAAATGTCGCAGCAGCTCTATTaGAAAACAGAACAGATCGAT | + |
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Preference number: 5 (lower is better) Translates to: DRKQPEPGTRLHRHHLKMSQQLY*KTEQID Trigger: ATCGATCTGTTCTGTTTTCAAATAGAGCTGCTGCGA...CATTTTAAGGTGGTGTCTGTGCAGCCGTGTCCCTGGTTCTGGCTGTTTTCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS-3UTR CAA 90 bp | GACAGAAAACAGCCAGAACCAGGGACACGGCTGCACAGACACCACCTTAAAATGTCATACAAGCTTCTCTaGCTTGATGTACTGATGGAT | + |
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Preference number: 5 (lower is better) Translates to: DRKQPEPGTRLHRHHLKMSYKLL*LDVLMD Trigger: ATCCATCAGTACATCAAGCAAGAGAAGCTTGTATGA...CATTTTAAGGTGGTGTCTGTGCAGCCGTGTCCCTGGTTCTGGCTGTTTTCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS-3UTR CAA 90 bp | GGAGGTTTTTGGTGGCTAGCACATCTGTGCGGCTCTAAGAGGTCAGCTTTGACATCATACAAGCTTCTCTaGCTTGATGTACTGATGGAT | + |
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Preference number: 5 (lower is better) Translates to: GGFWWLAHLCGSKRSALTSYKLL*LDVLMD Trigger: ATCCATCAGTACATCAAGCAAGAGAAGCTTGTATGA...TGTCAAAGCTGACCTCTTAGAGCCGCACAGATGTGCTAGCCACCAAAAACCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS-3UTR CAA 90 bp | AGAAAACAGCCAGAACCAGGGACACGGCTGCACAGACACCACCTTAAAATGGAAGGTCGCAGAACCAAGTaGCCAAGATCTTTTAGTTTA | + |
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Preference number: 5 (lower is better) Translates to: RKQPEPGTRLHRHHLKMEGRRTK*PRSFSL Trigger: TAAACTAAAAGATCTTGGCAACTTGGTTCTGCGACC...TTCCATTTTAAGGTGGTGTCTGTGCAGCCGTGTCCCTGGTTCTGGCTGTTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048578.3 |
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| CDS-3UTR CAA 90 bp | ACAGAAAACAGCCAGAACCAGGGACACGGCTGCACAGACACCACCTTAAAATGGGTAGAAGAATCCTGCTaGATCTGGAAATTTTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: TENSQNQGHGCTDTTLKWVEESC*IWKFSV Trigger: CACAGAAAATTTCCAGATCAAGCAGGATTCTTCTAC...CCATTTTAAGGTGGTGTCTGTGCAGCCGTGTCCCTGGTTCTGGCTGTTTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048578.3 |
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| CDS-3UTR CAA 90 bp | AGAATCAGTGACCTCGATGGAAACCAGAACTGGTTCCAAATGTCATATAGAATCGCGACTTTCAGACCATaGAACAGATCTTCTGGGACC | + |
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Preference number: 5 (lower is better) Translates to: RISDLDGNQNWFQMSYRIATFRP*NRSSGT Trigger: GGTCCCAGAAGATCTGTTCAATGGTCTGAAAGTCGC...GATTCTATATGACATTTGGAACCAGTTCTGGTTTCCATCGAGGTCACTGATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109278.8 |
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| CDS TCA 72 bp | GCTTCAGCAGCCTTCGGCAGCTTGCTCTGGCAGTGCTaGCCCTTGGGATCAGAAACCATGGGGCTGGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: ASAAFGSLLWQC*PLGSETMGLAD Trigger: GTCTGCCAGCCCCATGGTTTCTGATCCCAAGGGTCAGCACTGCCAGAGCAAGCTGCCGAAGGCTGCTGAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS GCA 72 bp | CGTCCTGTGGATGGGCTTCAGCAGCCTTCGGCAGCTTaGTCTGGCAGTGCTGACCCTTGGGATCAGAAACCA | + |
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Preference number: 6 (lower is better) Translates to: RPVDGLQQPSAA*SGSADPWDQKP Trigger: TGGTTTCTGATCCCAAGGGTCAGCACTGCCAGAGCAAGCTGCCGAAGGCTGCTGAAGCCCATCCACAGGACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS GCA 72 bp | GAACTAGAATCATCGCTGGCTTTGCTCCCTGCCACGTaGGCCCCTGGCTGTTCCTCCTCAAACGAGGCACTA | + |
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Preference number: 6 (lower is better) Translates to: ELESSLALLPAT*APGCSSSNEAL Trigger: TAGTGCCTCGTTTGAGGAGGAACAGCCAGGGGCGCACGTGGCAGGGAGCAAAGCCAGCGATGATTCTAGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS GCA 72 bp | CAGTTCAGAACTAGAATCATCGCTGGCTTTGCTCCCTaGCACGTGCGCCCCTGGCTGTTCCTCCTCAAACGA | + |
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Preference number: 6 (lower is better) Translates to: QFRTRIIAGFAP*HVRPWLFLLKR Trigger: TCGTTTGAGGAGGAACAGCCAGGGGCGCACGTGGCAGGGAGCAAAGCCAGCGATGATTCTAGTTCTGAACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS CAA 72 bp | TCTTCATCCAGTTCAGAACTAGAATCATCGCTGGCTTaGCTCCCTGCCACGTGCGCCCCTGGCTGTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SSSSSELESSLA*LPATCAPGCSS Trigger: GGAGGAACAGCCAGGGGCGCACGTGGCAGGGAGCAAAGCCAGCGATGATTCTAGTTCTGAACTGGATGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS CAA 90 bp | ATTAGGTATTCTTCATCCAGTTCAGAACTAGAATCATCGCTGGCTTaGCTCCCTGCCACGTGCGCCCCTGGCTGTTCCTCCTCAAACGAG | + |
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Preference number: 6 (lower is better) Translates to: IRYSSSSSELESSLA*LPATCAPGCSSSNE Trigger: CTCGTTTGAGGAGGAACAGCCAGGGGCGCACGTGGCAGGGAGCAAAGCCAGCGATGATTCTAGTTCTGAACTGGATGAAGAATACCTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS CAA 72 bp | GGGATCAGAAACCATGGGGCTGGCAGACTCTCCTTCTaGAGGATCTGCGACTTTCAGACCATTGAACAGATC | + |
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Preference number: 6 (lower is better) Translates to: GIRNHGAGRLSF*RICDFQTIEQI Trigger: GATCTGTTCAATGGTCTGAAAGTCGCAGATCCTCAAGAAGGAGAGTCTGCCAGCCCCATGGTTTCTGATCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS TCA 72 bp | GGATCAGAAACCATGGGGCTGGCAGACTCTCCTTCTTaGGGATCTGCGACTTTCAGACCATTGAACAGATCT | + |
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Preference number: 6 (lower is better) Translates to: GSETMGLADSPS*GSATFRPLNRS Trigger: AGATCTGTTCAATGGTCTGAAAGTCGCAGATCCTCAAGAAGGAGAGTCTGCCAGCCCCATGGTTTCTGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS TCA 72 bp | CCTGGCTGTTCCTCCTCAAACGAGGCACTACAGTCATaGAAACATTCCTCTTCAACATGGTCGTCCTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: PGCSSSNEALQS*KHSSSTWSSCG Trigger: TCCACAGGACGACCATGTTGAAGAGGAATGTTTTCATGACTGTAGTGCCTCGTTTGAGGAGGAACAGCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS CAA 72 bp | ATCTTTCTGGAAACAGGCTGGGCACATCTGAAGGGCTaGACTGTAAGAACTCTCAGCTTCCATGTAATCTCC | + |
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Preference number: 6 (lower is better) Translates to: IFLETGWAHLKG*TVRTLSFHVIS Trigger: GGAGATTACATGGAAGCTGAGAGTTCTTACAGTCAAGCCCTTCAGATGTGCCCAGCCTGTTTCCAGAAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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| CDS TCA 72 bp | ACTCTCCTTCTTGAGGATCTGCGACTTTCAGACCATTaGACAGATCTTCTGGGACCTTACAGTCTTCTGACT | + |
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Preference number: 6 (lower is better) Translates to: TLLLEDLRLSDH*TDLLGPYSLLT Trigger: AGTCAGAAGACTGTAAGGTCCCAGAAGATCTGTTCAATGGTCTGAAAGTCGCAGATCCTCAAGAAGGAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048578.3 ENSMUST00000109278.8 |
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