Pregenerated sensors for TSTD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035495Ensembl transcript IDs: ENSMUST00000107770.2, ENSMUST00000107772.8, ENSMUST00000129929.2, ENSMUST00000144495.2, ENSMUST00000147837.8
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGGCAGCTGACACTGACTCCCTGTCCCTTGTCCCTGTGGCCATCTaGTGTGCTGGCAGTGACCAACATGGATGCTCTCCATTTGTCTCT | + |
|
Preference number: 1 (lower is better) Translates to: QAADTDSLSLVPVAI*CAGSDQHGCSPFVS Trigger: AGAGACAAATGGAGAGCATCCATGTTGGTCACTGCCAGCACAGCAGATGGCCACAGGGACAAGGGACAGGGAGTCAGTGTCAGCTGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR TCA 90 bp | GTGGCACCAAGCTGCAGGGACAGCCAGCCCCACTCAGCTTCTCCTTaGAACACAACTGCAGCTGCATTCTGCATCACTGGAAACTGCAAA | + |
|
Preference number: 1 (lower is better) Translates to: VAPSCRDSQPHSASP*NTTAAAFCITGNCK Trigger: TTTGCAGTTTCCAGTGATGCAGAATGCAGCTGCAGTTGTGTTTCAAGGAGAAGCTGAGTGGGGCTGGCTGTCCCTGCAGCTTGGTGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR CCA 90 bp | TGGGATTCCTCAGGGTTTGCCTTTGTTCCAGGCTGTAGCATCCTCTaGATCAAATGGCAAATCAGGCAGCTGACACTGACTCCCTGTCCC | + |
|
Preference number: 1 (lower is better) Translates to: WDSSGFAFVPGCSIL*IKWQIRQLTLTPCP Trigger: GGGACAGGGAGTCAGTGTCAGCTGCCTGATTTGCCATTTGATCCAGAGGATGCTACAGCCTGGAACAAAGGCAAACCCTGAGGAATCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR TCA 90 bp | TATACCACAGTGGGCAATGGCTTATGTGAGATCAACACCATTGGGTaGATTTCCAGTCCACCATGCCTGTGGTATTTAGCATGGCCCTGC | + |
|
Preference number: 1 (lower is better) Translates to: YTTVGNGLCEINTIG*ISSPPCLWYLAWPC Trigger: GCAGGGCCATGCTAAATACCACAGGCATGGTGGACTGGAAATTCACCCAATGGTGTTGATCTCACATAAGCCATTGCCCACTGTGGTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| 3UTR GCA 90 bp | CTGCAGGGACAGCCAGCCCCACTCAGCTTCTCCTTGAAACACAACTaGAGCTGCATTCTGCATCACTGGAAACTGCAAAATAATATTAAA | + |
|
Preference number: 1 (lower is better) Translates to: LQGQPAPLSFSLKHN*SCILHHWKLQNNIK Trigger: TTTAATATTATTTTGCAGTTTCCAGTGATGCAGAATGCAGCTGCAGTTGTGTTTCAAGGAGAAGCTGAGTGGGGCTGGCTGTCCCTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR TCA 90 bp | CCACATAAAAACATCTTCCTATACCACAGTGGGCAATGGCTTATGTaGGATCAACACCATTGGGTGAATTTCCAGTCCACCATGCCTGTG | + |
|
Preference number: 1 (lower is better) Translates to: PHKNIFLYHSGQWLM*DQHHWVNFQSTMPV Trigger: CACAGGCATGGTGGACTGGAAATTCACCCAATGGTGTTGATCTCACATAAGCCATTGCCCACTGTGGTATAGGAAGATGTTTTTATGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| 3UTR GCA 90 bp | GGACAGCCAGCCCCACTCAGCTTCTCCTTGAAACACAACTGCAGCTaGATTCTGCATCACTGGAAACTGCAAAATAATATTAAAGCCATT | + |
|
Preference number: 1 (lower is better) Translates to: GQPAPLSFSLKHNCS*ILHHWKLQNNIKAI Trigger: AATGGCTTTAATATTATTTTGCAGTTTCCAGTGATGCAGAATGCAGCTGCAGTTGTGTTTCAAGGAGAAGCTGAGTGGGGCTGGCTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR CCA 90 bp | CTCAGCTTCTCCTTGAAACACAACTGCAGCTGCATTCTGCATCACTaGAAACTGCAAAATAATATTAAAGCCATTTGGTCTATGTGTGGC | + |
|
Preference number: 1 (lower is better) Translates to: LSFSLKHNCSCILHH*KLQNNIKAIWSMCG Trigger: GCCACACATAGACCAAATGGCTTTAATATTATTTTGCAGTTTCCAGTGATGCAGAATGCAGCTGCAGTTGTGTTTCAAGGAGAAGCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR TCA 90 bp | GATTCTGAAGCCGCATGGTCTCTGGCCAACTACTCAGTAGTGCCATaGTCACATATAGAAAAATGGGTTTGCAAATTTAGTAAATGCTTC | + |
|
Preference number: 1 (lower is better) Translates to: DSEAAWSLANYSVVP*SHIEKWVCKFSKCF Trigger: GAAGCATTTACTAAATTTGCAAACCCATTTTTCTATATGTGATCATGGCACTACTGAGTAGTTGGCCAGAGACCATGCGGCTTCAGAATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGTGGCATCGGGGCCTCAGCACTGAGTGTCCACTGAGGCTGCACACGGGCCCATGTCCCTTGTCCCTGTaGCCATCTGCTGTGCTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: RWHRGLSTECPLRLHTGPCPLSL*PSAVLA Trigger: TGCCAGCACAGCAGATGGCCACAGGGACAAGGGACA...TGGGCCCGTGTGCAGCCTCAGTGGACACTCAGTGCTGAGGCCCCGATGCCACCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGTATGGACAGTACAGGGTAACTAGAGGTGGCATCGGGGCCTCAGCACTGAGTACACGGGCCCAGGAGTaGCACCAAGCTGCAGGGACA | + |
|
Preference number: 2 (lower is better) Translates to: QYGQYRVTRGGIGASALSTRAQE*HQAAGT Trigger: TGTCCCTGCAGCTTGGTGCCACTCCTGGGCCCGTGT...ACTCAGTGCTGAGGCCCCGATGCCACCTCTAGTTACCCTGTACTGTCCATACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTCCAGGCTGTAGCATCCTCTGGATCAAATGGCAAATCAGGCAGCTGACACTGTGTCCCTTGTCCCTGTaGCCATCTGCTGTGCTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: VPGCSILWIKWQIRQLTLCPLSL*PSAVLA Trigger: TGCCAGCACAGCAGATGGCCACAGGGACAAGGGACA...CAGTGTCAGCTGCCTGATTTGCCATTTGATCCAGAGGATGCTACAGCCTGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGTATGGACAGTACAGGGTAACTAGAGGTGGCATCGGGGCCTCAGCACTGAGTAGGGAAGAGCTGGCCTaGTTTAAGAGTCTACACCCA | + |
|
Preference number: 2 (lower is better) Translates to: QYGQYRVTRGGIGASALSREELA*FKSLHP Trigger: TGGGTGTAGACTCTTAAACCAGGCCAGCTCTTCCCT...ACTCAGTGCTGAGGCCCCGATGCCACCTCTAGTTACCCTGTACTGTCCATACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGTATGGACAGTACAGGGTAACTAGAGGTGGCATCGGGGCCTCAGCACTGAGTTCCTTGAAACACAACTaGAGCTGCATTCTGCATCAC | + |
|
Preference number: 2 (lower is better) Translates to: QYGQYRVTRGGIGASALSSLKHN*SCILHH Trigger: GTGATGCAGAATGCAGCTGCAGTTGTGTTTCAAGGA...ACTCAGTGCTGAGGCCCCGATGCCACCTCTAGTTACCCTGTACTGTCCATACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAACAAAGCCTCTAGAGGACAGCAGAGTACAGCATCTTAATGGTAAGGAATTATCGGGGCCTCAGCACTaGGTGTCCACTGAGGCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: QTKPLEDSRVQHLNGKELSGPQH*VSTEAA Trigger: TGCAGCCTCAGTGGACACTCAGTGCTGAGGCCCCGA...TAATTCCTTACCATTAAGATGCTGTACTCTGCTGTCCTCTAGAGGCTTTGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTGAGTGCTGTGGGAACACCTGCGGGGTACTCATCTGCAGTCAGAAATCATTTTTTGCTGAAGAGCAATaGCTACCACCCTGCAGCATG | + |
|
Preference number: 2 (lower is better) Translates to: SECCGNTCGVLICSQKSFFAEEQ*LPPCSM Trigger: CATGCTGCAGGGTGGTAGGCATTGCTCTTCAGCAAA...AAATGATTTCTGACTGCAGATGAGTACCCCGCAGGTGTTCCCACAGCACTCAGA 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGTATGGACAGTACAGGGTAACTAGAGGTGGCATCGGGGCCTCAGCACTGAGTCATTTGGTCTATGTGTaGCTCTGTGTGCTTCTTAAG | + |
|
Preference number: 2 (lower is better) Translates to: QYGQYRVTRGGIGASALSHLVYV*LCVLLK Trigger: CTTAAGAAGCACACAGAGCCACACATAGACCAAATG...ACTCAGTGCTGAGGCCCCGATGCCACCTCTAGTTACCCTGTACTGTCCATACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTGAGTGCTGTGGGAACACCTGCGGGGTACTCATCTGCAGTCAGAAATCATTTCAGACACCAAGTGCCTaGCTGGTCATTTATGAGACA | + |
|
Preference number: 2 (lower is better) Translates to: SECCGNTCGVLICSQKSFQTPSA*LVIYET Trigger: TGTCTCATAAATGACCAGGCAGGCACTTGGTGTCTG...AAATGATTTCTGACTGCAGATGAGTACCCCGCAGGTGTTCCCACAGCACTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGAGTGCTGTGGGAACACCTGCGGGGTACTCATCTGCAGTCAGAAATCATTTGGCTGTAGCATCCTCTaGATCAAATGGCAAATCAGG | + |
|
Preference number: 2 (lower is better) Translates to: SECCGNTCGVLICSQKSFGCSIL*IKWQIR Trigger: CCTGATTTGCCATTTGATCCAGAGGATGCTACAGCC...AAATGATTTCTGACTGCAGATGAGTACCCCGCAGGTGTTCCCACAGCACTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCAATGGTGAATTTTCAAGTTTCAAAACCCACCACACCAGGCAACAGACATCCGGGCAATGGCTTATGTaGGATCAACACCATTGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: GNGEFSSFKTHHTRQQTSGQWLM*DQHHWV Trigger: CACCCAATGGTGTTGATCTCACATAAGCCATTGCCC...GGATGTCTGTTGCCTGGTGTGGTGGGTTTTGAAACTTGAAAATTCACCATTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCAATGGTGAATTTTCAAGTTTCAAAACCCACCACACCAGGCAACAGACATCCATCCCTCAACATCGTTaGGATTCCTCAGGGTTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: GNGEFSSFKTHHTRQQTSIPQHR*DSSGFA Trigger: GGCAAACCCTGAGGAATCCCAACGATGTTGAGGGAT...GGATGTCTGTTGCCTGGTGTGGTGGGTTTTGAAACTTGAAAATTCACCATTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGTATGGACAGTACAGGGTAACTAGAGGTGGCATCGGGGCCTCAGCACTGAGTTGCAAATTTAGTAAATaGTTCAAGGCACAAGGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: QYGQYRVTRGGIGASALSCKFSK*FKAQGD Trigger: ATCACCTTGTGCCTTGAAGCATTTACTAAATTTGCA...ACTCAGTGCTGAGGCCCCGATGCCACCTCTAGTTACCCTGTACTGTCCATACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCTATGTGTGGCTCTGTGTGCTTCTTAAGAATCGTGGGATAAGAATATGTGCCAAGCTGAGAGAGGGATaGTGGGTAATGCAAAGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: VYVWLCVLLKNRGIRICAKLREG*WVMQSC Trigger: GCAGCTTTGCATTACCCAGCATCCCTCTCTCAGCTT...GGCACATATTCTTATCCCACGATTCTTAAGAAGCACACAGAGCCACACATAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR-3UTR GCA 90 bp | GTACAGCATCTTAATGGTAAGGAATTAGGAGATCCTGGCCAAACAACACACGGGTGGGATAAGAATATGTaGCCAAAGGCCAGGAGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: VQHLNGKELGDPGQTTHGWDKNM*PKARRL Trigger: TAGCCTCCTGGCCTTTGGGCACATATTCTTATCCCA...CCCGTGTGTTGTTTGGCCAGGATCTCCTAATTCCTTACCATTAAGATGCTGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTTGCAAATTTAGTAAATGCTTCAAGGCACAAGGTGATCAGAGCCACAGAGCCAGGGAAGAGCTGGCCTaGTTTAAGAGTCTACACCCA | + |
|
Preference number: 2 (lower is better) Translates to: VCKFSKCFKAQGDQSHRAREELA*FKSLHP Trigger: TGGGTGTAGACTCTTAAACCAGGCCAGCTCTTCCCT...GGCTCTGTGGCTCTGATCACCTTGTGCCTTGAAGCATTTACTAAATTTGCAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTTGCAAATTTAGTAAATGCTTCAAGGCACAAGGTGATCAGAGCCACAGAGCCGGCTGTAGCATCCTCTaGATCAAATGGCAAATCAGG | + |
|
Preference number: 2 (lower is better) Translates to: VCKFSKCFKAQGDQSHRAGCSIL*IKWQIR Trigger: CCTGATTTGCCATTTGATCCAGAGGATGCTACAGCC...GGCTCTGTGGCTCTGATCACCTTGTGCCTTGAAGCATTTACTAAATTTGCAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTGAGTGCTGTGGGAACACCTGCGGGGTACTCATCTGCAGTCAGAAATCATTTTACTCAGTAGTGCCATaGTCACATATAGAAAAATGG | + |
|
Preference number: 2 (lower is better) Translates to: SECCGNTCGVLICSQKSFYSVVP*SHIEKW Trigger: CCATTTTTCTATATGTGATCATGGCACTACTGAGTA...AAATGATTTCTGACTGCAGATGAGTACCCCGCAGGTGTTCCCACAGCACTCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGCCACCTCTTTCAGAGGACCTCTGTGAAGGGACAGAATATACTTTAGATTCTTATACCGTCTCAAGCTaGACATGGCAACTTAAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: GPPLSEDLCEGTEYTLDSYTVSS*TWQLKS Trigger: AGACTTAAGTTGCCATGTGCAGCTTGAGACGGTATA...AGAATCTAAAGTATATTCTGTCCCTTCACAGAGGTCCTCTGAAAGAGGTGGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR-3UTR GCA 90 bp | CATTTGGTCTATGTGTGGCTCTGTGTGCTTCTTAAGAATCGTGGGATAAGAATAATCCCTGAGAACACTTaGAAGCTGAGAGAGGGATGC | + |
|
Preference number: 2 (lower is better) Translates to: HLVYVWLCVLLKNRGIRIIPENT*KLREGC Trigger: GCATCCCTCTCTCAGCTTGCAAGTGTTCTCAGGGAT...TATTCTTATCCCACGATTCTTAAGAAGCACACAGAGCCACACATAGACCAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR-3UTR GCA 90 bp | CAAACAAAGCCTCTAGAGGACAGCAGAGTACAGCATCTTAATGGTAAGGAATTAATCCCTGAGAACACTTaGAAGCTGAGAGAGGGATGC | + |
|
Preference number: 2 (lower is better) Translates to: QTKPLEDSRVQHLNGKELIPENT*KLREGC Trigger: GCATCCCTCTCTCAGCTTGCAAGTGTTCTCAGGGAT...TAATTCCTTACCATTAAGATGCTGTACTCTGCTGTCCTCTAGAGGCTTTGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTTGCAAATTTAGTAAATGCTTCAAGGCACAAGGTGATCAGAGCCACAGAGCCGTCTCAAGCTGCACATaGCAACTTAAGTCTGCATGT | + |
|
Preference number: 2 (lower is better) Translates to: VCKFSKCFKAQGDQSHRAVSSCT*QLKSAC Trigger: ACATGCAGACTTAAGTTGCCATGTGCAGCTTGAGAC...GGCTCTGTGGCTCTGATCACCTTGTGCCTTGAAGCATTTACTAAATTTGCAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR-3UTR TCA 90 bp | AATTTTCAAGTTTCAAAACCCACCACACCAGGCAACAGACATCCTTCTGAGTGCTTCAGAGGACCTCTGTaGAGGGACAGAATATACTTT | + |
|
Preference number: 2 (lower is better) Translates to: NFQVSKPTTPGNRHPSECFRGPL*RDRIYF Trigger: AAAGTATATTCTGTCCCTTCACAGAGGTCCTCTGAA...GCACTCAGAAGGATGTCTGTTGCCTGGTGTGGTGGGTTTTGAAACTTGAAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| 3UTR-3UTR CCA 90 bp | CATTTGGTCTATGTGTGGCTCTGTGTGCTTCTTAAGAATCGTGGGATAAGAATAGTCTCAAGCTGCACATaGCAACTTAAGTCTGCATGT | + |
|
Preference number: 2 (lower is better) Translates to: HLVYVWLCVLLKNRGIRIVSSCT*QLKSAC Trigger: ACATGCAGACTTAAGTTGCCATGTGCAGCTTGAGAC...TATTCTTATCCCACGATTCTTAAGAAGCACACAGAGCCACACATAGACCAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR-3UTR GCA 90 bp | CAATATTATAGTAATGATAAGGCTCAAAAGCTGTTGAGCATAGCCAGGGGGCTTTATACCGTCTCAAGCTaGACATGGCAACTTAAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: QYYSNDKAQKLLSIARGLYTVSS*TWQLKS Trigger: AGACTTAAGTTGCCATGTGCAGCTTGAGACGGTATA...AAGCCCCCTGGCTATGCTCAACAGCTTTTGAGCCTTATCATTACTATAATATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTAAGAATGAAAGACAAGCCACAGAATTTTCTAAGAGTCAGAAAGACACAGGAAAACACAACTGCAGCTaGATTCTGCATCACTGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: PKNERQATEFSKSQKDTGKHNCS*ILHHWK Trigger: TTTCCAGTGATGCAGAATGCAGCTGCAGTTGTGTTT...TCCTGTGTCTTTCTGACTCTTAGAAAATTCTGTGGCTTGTCTTTCATTCTTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| 3UTR CAA 90 bp | CAAGCCACAGAATTTTCTAAGAGTCAGAAAGACACAGGATTCCTTTaGCCAGGTAAGATAAAGAGGGAGAAAAAGGCAATGGTGAATTTT | + |
|
Preference number: 2 (lower is better) Translates to: QATEFSKSQKDTGFL*PGKIKREKKAMVNF Trigger: AAAATTCACCATTGCCTTTTTCTCCCTCTTTATCTTACCTGGCAAAAGGAATCCTGTGTCTTTCTGACTCTTAGAAAATTCTGTGGCTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAGAAAAATGGGTTTGCAAATTTAGTAAATGCTTCAAGGCACAAGGTGATCAGATCCTCTGGATCAAATaGCAAATCAGGCAGCTGACA | + |
|
Preference number: 2 (lower is better) Translates to: IEKWVCKFSKCFKAQGDQILWIK*QIRQLT Trigger: TGTCAGCTGCCTGATTTGCCATTTGATCCAGAGGAT...CTGATCACCTTGTGCCTTGAAGCATTTACTAAATTTGCAAACCCATTTTTCTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGTGGCATCGGGGCCTCAGCACTGAGTGTCCACTGAGGCTGCACACGGGCCCACTGACTCCCTGTCCCTaGTCCCTGTGGCCATCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: RWHRGLSTECPLRLHTGPLTPCP*SLWPSA Trigger: AGCAGATGGCCACAGGGACAAGGGACAGGGAGTCAG...TGGGCCCGTGTGCAGCCTCAGTGGACACTCAGTGCTGAGGCCCCGATGCCACCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR TCA 72 bp | GTGCCCAAAGGCCAGGAGGCTAGGCAGCTACCATGCTaGGTGAGCTCACCGACCAAGTGTCTGTGTGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: VPKGQEARQLPC*VSSPTKCLCGR Trigger: TCTGCCACACAGACACTTGGTCGGTGAGCTCACTCAGCATGGTAGCTGCCTAGCCTCCTGGCCTTTGGGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR TCA 72 bp | CCAAAGGCCAGGAGGCTAGGCAGCTACCATGCTGAGTaGGCTCACCGACCAAGTGTCTGTGTGGCAGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: PKARRLGSYHAE*AHRPSVCVADA Trigger: AGCATCTGCCACACAGACACTTGGTCGGTGAGCTCACTCAGCATGGTAGCTGCCTAGCCTCCTGGCCTTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR GCA 72 bp | GACACTGACTCCCTGTCCCTTGTCCCTGTGGCCATCTaGTGTGCTGGCAGTGACCAACATGGATGCTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: DTDSLSLVPVAI*CAGSDQHGCSP Trigger: TGGAGAGCATCCATGTTGGTCACTGCCAGCACAGCAGATGGCCACAGGGACAAGGGACAGGGAGTCAGTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR GCA 72 bp | TGCACATGGCAACTTAAGTCTGCATGTGTCAGTGAATaGGGAACACCAGGCCCAGGTCCAGGCTCACAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: CTWQLKSACVSE*GTPGPGPGSQG Trigger: TCCCTGTGAGCCTGGACCTGGGCCTGGTGTTCCGCATTCACTGACACATGCAGACTTAAGTTGCCATGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR GCA 72 bp | AAACCCACCACACCAGGCAACAGACATCCTTCTGAGTaGTGTGGGAACACCTGCGGGGTACTCATCTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: KPTTPGNRHPSE*CGNTCGVLICS Trigger: ACTGCAGATGAGTACCCCGCAGGTGTTCCCACAGCACTCAGAAGGATGTCTGTTGCCTGGTGTGGTGGGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGTATGGACAGTACAGGGTAACTAGAGGTGGCATCGGGGCCTCAGCACTGAGTCCACTCAGCTTCTCCTaGAAACACAACTGCAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: QYGQYRVTRGGIGASALSPLSFS*KHNCSC Trigger: GCAGCTGCAGTTGTGTTTCAAGGAGAAGCTGAGTGG...ACTCAGTGCTGAGGCCCCGATGCCACCTCTAGTTACCCTGTACTGTCCATACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR TCA 72 bp | GTCCCTTGTCCCTGTGGCCATCTGCTGTGCTGGCAGTaGCCAACATGGATGCTCTCCATTTGTCTCTATACC | + |
|
Preference number: 3 (lower is better) Translates to: VPCPCGHLLCWQ*PTWMLSICLYT Trigger: GGTATAGAGACAAATGGAGAGCATCCATGTTGGTCACTGCCAGCACAGCAGATGGCCACAGGGACAAGGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR TCA 72 bp | TTCAAAACCCACCACACCAGGCAACAGACATCCTTCTaGGTGCTGTGGGAACACCTGCGGGGTACTCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: FKTHHTRQQTSF*VLWEHLRGTHL Trigger: CAGATGAGTACCCCGCAGGTGTTCCCACAGCACTCAGAAGGATGTCTGTTGCCTGGTGTGGTGGGTTTTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| 3UTR CCA 72 bp | GCCACAGAGCCTCAGGCAGTTAGGGAAGAGCTGGCCTaGTTTAAGAGTCTACACCCAGGGCCCAACTTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: ATEPQAVREELA*FKSLHPGPNFY Trigger: ATAAAAGTTGGGCCCTGGGTGTAGACTCTTAAACCAGGCCAGCTCTTCCCTAACTGCCTGAGGCTCTGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR-3UTR CAA 90 bp | AATTTTCAAGTTTCAAAACCCACCACACCAGGCAACAGACATCCTTCTGAGTGCCTGACTCCCTGTCCCTaGTCCCTGTGGCCATCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: NFQVSKPTTPGNRHPSECLTPCP*SLWPSA Trigger: AGCAGATGGCCACAGGGACAAGGGACAGGGAGTCAG...GCACTCAGAAGGATGTCTGTTGCCTGGTGTGGTGGGTTTTGAAACTTGAAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| 3UTR GCA 72 bp | TCCAGTCCACCATGCCTGTGGTATTTAGCATGGCCCTaGTTACAGACACCAAGTGCCTGCCTGGTCATTTAT | + |
|
Preference number: 3 (lower is better) Translates to: SSPPCLWYLAWP*LQTPSACLVIY Trigger: ATAAATGACCAGGCAGGCACTTGGTGTCTGTAAGCAGGGCCATGCTAAATACCACAGGCATGGTGGACTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| 3UTR GCA 72 bp | GGCAACAGACATCCTTCTGAGTGCTGTGGGAACACCTaGGGGGTACTCATCTGCAGTCAGAAATCATTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: GNRHPSECCGNT*GVLICSQKSFL Trigger: AAGAAATGATTTCTGACTGCAGATGAGTACCCCGCAGGTGTTCCCACAGCACTCAGAAGGATGTCTGTTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCTATGTGTGGCTCTGTGTGCTTCTTAAGAATCGTGGGATAAGAATATGTGCCCCTCAGGGTTTGCCTTaGTTCCAGGCTGTAGCATCC | + |
|
Preference number: 3 (lower is better) Translates to: VYVWLCVLLKNRGIRICAPQGLP*FQAVAS Trigger: GGATGCTACAGCCTGGAACAAAGGCAAACCCTGAGG...GGCACATATTCTTATCCCACGATTCTTAAGAAGCACACAGAGCCACACATAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR TCA 72 bp | GTGGGCAATGGCTTATGTGAGATCAACACCATTGGGTaGATTTCCAGTCCACCATGCCTGTGGTATTTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: VGNGLCEINTIG*ISSPPCLWYLA Trigger: TGCTAAATACCACAGGCATGGTGGACTGGAAATTCACCCAATGGTGTTGATCTCACATAAGCCATTGCCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| 3UTR TCA 72 bp | CTGCTTACAGACACCAAGTGCCTGCCTGGTCATTTATaGGACAAATCAAATCACACAGAGCTCTTGCCTACA | + |
|
Preference number: 3 (lower is better) Translates to: LLTDTKCLPGHL*DKSNHTELLPT Trigger: TGTAGGCAAGAGCTCTGTGTGATTTGATTTGTCTCATAAATGACCAGGCAGGCACTTGGTGTCTGTAAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| 3UTR TCA 72 bp | AACATCTTCCTATACCACAGTGGGCAATGGCTTATGTaGGATCAACACCATTGGGTGAATTTCCAGTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: NIFLYHSGQWLM*DQHHWVNFQST Trigger: GGTGGACTGGAAATTCACCCAATGGTGTTGATCTCACATAAGCCATTGCCCACTGTGGTATAGGAAGATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| 3UTR GCA 72 bp | TGGATGCTCTCCATTTGTCTCTATACCGTCTCAAGCTaGACATGGCAACTTAAGTCTGCATGTGTCAGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: WMLSICLYTVSS*TWQLKSACVSE Trigger: TTCACTGACACATGCAGACTTAAGTTGCCATGTGCAGCTTGAGACGGTATAGAGACAAATGGAGAGCATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR GCA 72 bp | TATTTAGCATGGCCCTGCTTACAGACACCAAGTGCCTaGCTGGTCATTTATGAGACAAATCAAATCACACAG | + |
|
Preference number: 3 (lower is better) Translates to: YLAWPCLQTPSA*LVIYETNQITQ Trigger: CTGTGTGATTTGATTTGTCTCATAAATGACCAGGCAGGCACTTGGTGTCTGTAAGCAGGGCCATGCTAAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTAAGAATGAAAGACAAGCCACAGAATTTTCTAAGAGTCAGAAAGACACAGGAGTGAGATCAACACCATaGGGTGAATTTCCAGTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PKNERQATEFSKSQKDTGVRSTP*GEFPVH Trigger: GTGGACTGGAAATTCACCCAATGGTGTTGATCTCAC...TCCTGTGTCTTTCTGACTCTTAGAAAATTCTGTGGCTTGTCTTTCATTCTTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| CDS-3UTR CCA 90 bp | AGGTGGCATCGGGGCCTCAGCACTGAGTGTCCACTGAGGCTGCACACGGGCCCATGCCTGCTGTTCCTGTaGGATTCGTGGCCTCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RWHRGLSTECPLRLHTGPCLLFL*DSWPPG Trigger: GCCCGGAGGCCACGAATCCCACAGGAACAGCAGGCA...TGGGCCCGTGTGCAGCCTCAGTGGACACTCAGTGCTGAGGCCCCGATGCCACCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR TCA 90 bp | AGGTGGCATCGGGGCCTCAGCACTGAGTGTCCACTGAGGCTGCACACGGGCCCAGGGCGTAAGGCTCTGTaGGGCACTCAATGCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RWHRGLSTECPLRLHTGPGRKAL*GTQCCS Trigger: ACTGCAGCATTGAGTGCCTCACAGAGCCTTACGCCC...TGGGCCCGTGTGCAGCCTCAGTGGACACTCAGTGCTGAGGCCCCGATGCCACCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR CCA 90 bp | AGGTGGCATCGGGGCCTCAGCACTGAGTGTCCACTGAGGCTGCACACGGGCCCAACAAGCTGGCGGCATTaGGGAGTAGAGCAGAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RWHRGLSTECPLRLHTGPTSWRH*GVEQSL Trigger: CAAACTCTGCTCTACTCCCCAATGCCGCCAGCTTGT...TGGGCCCGTGTGCAGCCTCAGTGGACACTCAGTGCTGAGGCCCCGATGCCACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR GCA 90 bp | GCTTCAAGGCACAAGGTGATCAGAGCCACAGAGCCTCAGGCAGTTAGGGAAGAGGGCCTGAAGCCTGCTTaGCCCCTTTGTCTTGACACG | + |
|
Preference number: 4 (lower is better) Translates to: ASRHKVIRATEPQAVREEGLKPA*PLCLDT Trigger: CGTGTCAAGACAAAGGGGGCAAGCAGGCTTCAGGCC...CTCTTCCCTAACTGCCTGAGGCTCTGTGGCTCTGATCACCTTGTGCCTTGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAGGCACAAGGTGATCAGAGCCACAGAGCCTCAGGCAGTTAGGGAAGAGCAGGCACAGACCCAATaGGGGTCCTCCAAGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ASRHKVIRATEPQAVREEQAQTQ*GSSKSQ Trigger: CTGTGACTTGGAGGACCCCCATTGGGTCTGTGCCTG...CTCTTCCCTAACTGCCTGAGGCTCTGTGGCTCTGATCACCTTGTGCCTTGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR GCA 90 bp | GCTTCAAGGCACAAGGTGATCAGAGCCACAGAGCCTCAGGCAGTTAGGGAAGAGAGCGAATGCCCCCAGTaGAGTACATCAGCACCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASRHKVIRATEPQAVREESECPQ*STSAPS Trigger: AGAGGGTGCTGATGTACTGCACTGGGGGCATTCGCT...CTCTTCCCTAACTGCCTGAGGCTCTGTGGCTCTGATCACCTTGTGCCTTGAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR GCA 90 bp | CATGGCAACTTAAGTCTGCATGTGTCAGTGAATGCGGAACACCAGGCCCAGGTCCCCGCTCACAGCGAATaGCCCCAGTGCAGTACATCA | + |
|
Preference number: 4 (lower is better) Translates to: HGNLSLHVSVNAEHQAQVPAHSE*PQCSTS Trigger: TGATGTACTGCACTGGGGGCATTCGCTGTGAGCGGG...GACCTGGGCCTGGTGTTCCGCATTCACTGACACATGCAGACTTAAGTTGCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR CCA 90 bp | CAGTATGGACAGTACAGGGTAACTAGAGGTGGCATCGGGGCCTCAGCACTGAGTCCACGTAGAGTCTGGTaGCCACTTTGCTTCCGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QYGQYRVTRGGIGASALSPRRVW*PLCFRQ Trigger: TTGGCGGAAGCAAAGTGGCCACCAGACTCTACGTGG...ACTCAGTGCTGAGGCCCCGATGCCACCTCTAGTTACCCTGTACTGTCCATACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR TCA 90 bp | CATGGCAACTTAAGTCTGCATGTGTCAGTGAATGCGGAACACCAGGCCCAGGTCAATTCCGGGAAGCAGTaGGACCCTCCTTTGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HGNLSLHVSVNAEHQAQVNSGKQ*DPPLLL Trigger: GAGCAGCAAAGGAGGGTCTCACTGCTTCCCGGAATT...GACCTGGGCCTGGTGTTCCGCATTCACTGACACATGCAGACTTAAGTTGCCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR GCA 90 bp | ACATGGCAACTTAAGTCTGCATGTGTCAGTGAATGCGGAACACCAGGCCCAGGTTGGCACAGAGCTGTCTaGCAGGCACAGACCCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: TWQLKSACVSECGTPGPGWHRAV*QAQTQW Trigger: CCATTGGGTCTGTGCCTGGCAGACAGCTCTGTGCCA...ACCTGGGCCTGGTGTTCCGCATTCACTGACACATGCAGACTTAAGTTGCCATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR CCA 90 bp | ACATGGCAACTTAAGTCTGCATGTGTCAGTGAATGCGGAACACCAGGCCCAGGTCAGGTCAACACAAGCTaGCGGCATTGGGGAGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TWQLKSACVSECGTPGPGQVNTS*RHWGVE Trigger: CTCTACTCCCCAATGCCGCCAGCTTGTGTTGACCTG...ACCTGGGCCTGGTGTTCCGCATTCACTGACACATGCAGACTTAAGTTGCCATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR TCA 90 bp | CAGTATGGACAGTACAGGGTAACTAGAGGTGGCATCGGGGCCTCAGCACTGAGTATGCCACCCTTGAGCTaGAACACTTCCTTACACACT | + |
|
Preference number: 4 (lower is better) Translates to: QYGQYRVTRGGIGASALSMPPLS*NTSLHT Trigger: AGTGTGTAAGGAAGTGTTTCAGCTCAAGGGTGGCAT...ACTCAGTGCTGAGGCCCCGATGCCACCTCTAGTTACCCTGTACTGTCCATACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR GCA 90 bp | GGGCCACCTCTTTCAGAGGACCTCTGTGAAGGGACAGAATATACTTTAGATTCTCTTGGCTCTGAGGTATaGGGAACCCCGCTCACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GPPLSEDLCEGTEYTLDSLGSEV*GTPLTA Trigger: CGCTGTGAGCGGGGTTCCGCATACCTCAGAGCCAAG...AGAATCTAAAGTATATTCTGTCCCTTCACAGAGGTCCTCTGAAAGAGGTGGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR CCA 90 bp | TATAGTAATGATAAGGCTCAAAAGCTGTTGAGCATAGCCAGGGGGCTTCTGACTTGCCTGCTGTTCCTGTaGGATTCGTGGCCTCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YSNDKAQKLLSIARGLLTCLLFL*DSWPPG Trigger: GCCCGGAGGCCACGAATCCCACAGGAACAGCAGGCA...AGTCAGAAGCCCCCTGGCTATGCTCAACAGCTTTTGAGCCTTATCATTACTATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR TCA 90 bp | GTTCCAGGCTGTAGCATCCTCTGGATCAAATGGCAAATCAGGCAGCTGACACTGCATGTCTGTGGATGCTaGTCTGGTCTGCAAACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VPGCSILWIKWQIRQLTLHVCGC*SGLQTA Trigger: AGCTGTTTGCAGACCAGATCAGCATCCACAGACATG...CAGTGTCAGCTGCCTGATTTGCCATTTGATCCAGAGGATGCTACAGCCTGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCAAGGCACAAGGTGATCAGAGCCACAGAGCCTCAGGCAGTTAGGGAAGAGGCACCCTCTTCTGCCTaGAAATGTCAAGGTTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ASRHKVIRATEPQAVREEAPSSA*KCQGFC Trigger: ACAAAAACCTTGACATTTTCAGGCAGAAGAGGGTGC...CTCTTCCCTAACTGCCTGAGGCTCTGTGGCTCTGATCACCTTGTGCCTTGAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR GCA 90 bp | GGCAATGGTGAATTTTCAAGTTTCAAAACCCACCACACCAGGCAACAGACATCCCCCGCTCACAGCGAATaGCCCCAGTGCAGTACATCA | + |
|
Preference number: 4 (lower is better) Translates to: GNGEFSSFKTHHTRQQTSPAHSE*PQCSTS Trigger: TGATGTACTGCACTGGGGGCATTCGCTGTGAGCGGG...GGATGTCTGTTGCCTGGTGTGGTGGGTTTTGAAACTTGAAAATTCACCATTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| CDS-3UTR GCA 90 bp | GTACAGCATCTTAATGGTAAGGAATTAGGAGATCCTGGCCAAACAACACACGGGGGCCTGAAGCCTGCTTaGCCCCTTTGTCTTGACACG | + |
|
Preference number: 4 (lower is better) Translates to: VQHLNGKELGDPGQTTHGGLKPA*PLCLDT Trigger: CGTGTCAAGACAAAGGGGGCAAGCAGGCTTCAGGCC...CCCGTGTGTTGTTTGGCCAGGATCTCCTAATTCCTTACCATTAAGATGCTGTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| CDS-3UTR CCA 90 bp | GGGCCACCTCTTTCAGAGGACCTCTGTGAAGGGACAGAATATACTTTAGATTCTCAGGCACAGACCCAATaGGGGTCCTCCAAGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GPPLSEDLCEGTEYTLDSQAQTQ*GSSKSQ Trigger: CTGTGACTTGGAGGACCCCCATTGGGTCTGTGCCTG...AGAATCTAAAGTATATTCTGTCCCTTCACAGAGGTCCTCTGAAAGAGGTGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR CAA 72 bp | GCTGTGCTGGCAGTGACCAACATGGATGCTCTCCATTaGTCTCTATACCGTCTCAAGCTGCACATGGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: AVLAVTNMDALH*SLYRLKLHMAT Trigger: AGTTGCCATGTGCAGCTTGAGACGGTATAGAGACAAATGGAGAGCATCCATGTTGGTCACTGCCAGCACAGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR CAA 72 bp | TCCCTCAACATCGTTGGGATTCCTCAGGGTTTGCCTTaGTTCCAGGCTGTAGCATCCTCTGGATCAAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLNIVGIPQGLP*FQAVASSGSNG Trigger: GCCATTTGATCCAGAGGATGCTACAGCCTGGAACAAAGGCAAACCCTGAGGAATCCCAACGATGTTGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| 3UTR CAA 72 bp | AGAAGCCGCCAAGCTCAAGATAATCCCTCAACATCGTaGGGATTCCTCAGGGTTTGCCTTTGTTCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSRQAQDNPSTS*GFLRVCLCSRL Trigger: CAGCCTGGAACAAAGGCAAACCCTGAGGAATCCCAACGATGTTGAGGGATTATCTTGAGCTTGGCGGCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR TCA 90 bp | GTTCCAGGCTGTAGCATCCTCTGGATCAAATGGCAAATCAGGCAGCTGACACTGATGCCACCCTTGAGCTaGAACACTTCCTTACACACT | + |
|
Preference number: 4 (lower is better) Translates to: VPGCSILWIKWQIRQLTLMPPLS*NTSLHT Trigger: AGTGTGTAAGGAAGTGTTTCAGCTCAAGGGTGGCAT...CAGTGTCAGCTGCCTGATTTGCCATTTGATCCAGAGGATGCTACAGCCTGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR TCA 90 bp | TCTGAGTGCTGTGGGAACACCTGCGGGGTACTCATCTGCAGTCAGAAATCATTTTGTGGATGCCACCCTTaGGCTGAAACACTTCCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SECCGNTCGVLICSQKSFCGCHP*AETLPY Trigger: GTAAGGAAGTGTTTCAGCTCAAGGGTGGCATCCACA...AAATGATTTCTGACTGCAGATGAGTACCCCGCAGGTGTTCCCACAGCACTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| CDS-3UTR GCA 90 bp | TTTAGTAAATGCTTCAAGGCACAAGGTGATCAGAGCCACAGAGCCTCAGGCAGTTACACGTCTTCAGCATaGTGTGTGGCCACATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSKCFKAQGDQSHRASGSYTSSA*CVATCL Trigger: CAGACATGTGGCCACACAGCATGCTGAAGACGTGTA...ACTGCCTGAGGCTCTGTGGCTCTGATCACCTTGTGCCTTGAAGCATTTACTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR GCA 90 bp | CATTTGGTCTATGTGTGGCTCTGTGTGCTTCTTAAGAATCGTGGGATAAGAATACTTGGCTCTGAGGTATaGGGAACCCCGCTCACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: HLVYVWLCVLLKNRGIRILGSEV*GTPLTA Trigger: CGCTGTGAGCGGGGTTCCGCATACCTCAGAGCCAAG...TATTCTTATCCCACGATTCTTAAGAAGCACACAGAGCCACACATAGACCAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR CCA 90 bp | GTCTATGTGTGGCTCTGTGTGCTTCTTAAGAATCGTGGGATAAGAATATGTGCCGAGCAGAGTTTGTATTaGTCCCATGGGGCTCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VYVWLCVLLKNRGIRICAEQSLY*SHGAPQ Trigger: CTGCGGAGCCCCATGGGACCAATACAAACTCTGCTC...GGCACATATTCTTATCCCACGATTCTTAAGAAGCACACAGAGCCACACATAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR CCA 90 bp | TATAGTAATGATAAGGCTCAAAAGCTGTTGAGCATAGCCAGGGGGCTTCTGACTGAGCAGAGTTTGTATTaGTCCCATGGGGCTCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YSNDKAQKLLSIARGLLTEQSLY*SHGAPQ Trigger: CTGCGGAGCCCCATGGGACCAATACAAACTCTGCTC...AGTCAGAAGCCCCCTGGCTATGCTCAACAGCTTTTGAGCCTTATCATTACTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR TCA 90 bp | TATAGTAATGATAAGGCTCAAAAGCTGTTGAGCATAGCCAGGGGGCTTCTGACTTTGCCCCCTTTGTCTTaGCACGTGACACAACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YSNDKAQKLLSIARGLLTLPPLS*HVTQQA Trigger: AGCCTGTTGTGTCACGTGTCAAGACAAAGGGGGCAA...AGTCAGAAGCCCCCTGGCTATGCTCAACAGCTTTTGAGCCTTATCATTACTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR GCA 90 bp | ACATGGCAACTTAAGTCTGCATGTGTCAGTGAATGCGGAACACCAGGCCCAGGTATCAGCACCCTCTTCTaGCTGAAAATGTCAAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TWQLKSACVSECGTPGPGISTLF*LKMSRF Trigger: AAACCTTGACATTTTCAGGCAGAAGAGGGTGCTGAT...ACCTGGGCCTGGTGTTCCGCATTCACTGACACATGCAGACTTAAGTTGCCATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR CCA 90 bp | TATAGTAATGATAAGGCTCAAAAGCTGTTGAGCATAGCCAGGGGGCTTCTGACTGTGGCCACATGTCTGTaGATGCTGATCTGGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: YSNDKAQKLLSIARGLLTVATCL*MLIWSA Trigger: TGCAGACCAGATCAGCATCCACAGACATGTGGCCAC...AGTCAGAAGCCCCCTGGCTATGCTCAACAGCTTTTGAGCCTTATCATTACTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR CCA 90 bp | GTCTATGTGTGGCTCTGTGTGCTTCTTAAGAATCGTGGGATAAGAATATGTGCCGTGGCCACATGTCTGTaGATGCTGATCTGGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VYVWLCVLLKNRGIRICAVATCL*MLIWSA Trigger: TGCAGACCAGATCAGCATCCACAGACATGTGGCCAC...GGCACATATTCTTATCCCACGATTCTTAAGAAGCACACAGAGCCACACATAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTACAGACACCAAGTGCCTGCCTGGTCATTTATGAGACAAATCAAATCACACAGGTCAACACAAGCTaGCGGCATTGGGGAGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CLQTPSACLVIYETNQITQVNTS*RHWGVE Trigger: CTCTACTCCCCAATGCCGCCAGCTTGTGTTGACCTG...TGTGATTTGATTTGTCTCATAAATGACCAGGCAGGCACTTGGTGTCTGTAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| CDS-3UTR CCA 90 bp | TATAGTAATGATAAGGCTCAAAAGCTGTTGAGCATAGCCAGGGGGCTTCTGACTTCTTTAAAACTGTCCTaGGAGGGGCCTGAAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YSNDKAQKLLSIARGLLTSLKLS*EGPEAC Trigger: GCAGGCTTCAGGCCCCTCCCAGGACAGTTTTAAAGA...AGTCAGAAGCCCCCTGGCTATGCTCAACAGCTTTTGAGCCTTATCATTACTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR TCA 90 bp | GTCTCTGGCCAACTACTCAGTAGTGCCATGATCACATATAGAAAAATGGGTTTGATGGGCAGGAAAGCATaGCTTCCACGTAGAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSGQLLSSAMITYRKMGLMGRKA*LPRRVW Trigger: CCAGACTCTACGTGGAAGTCATGCTTTCCTGCCCAT...CAAACCCATTTTTCTATATGTGATCATGGCACTACTGAGTAGTTGGCCAGAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR TCA 90 bp | CAATATTATAGTAATGATAAGGCTCAAAAGCTGTTGAGCATAGCCAGGGGGCTTAATTCCGGGAAGCAGTaGGACCCTCCTTTGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QYYSNDKAQKLLSIARGLNSGKQ*DPPLLL Trigger: GAGCAGCAAAGGAGGGTCTCACTGCTTCCCGGAATT...AAGCCCCCTGGCTATGCTCAACAGCTTTTGAGCCTTATCATTACTATAATATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR GCA 90 bp | AATTTTCAAGTTTCAAAACCCACCACACCAGGCAACAGACATCCTTCTGAGTGCTACACGTCTTCAGCATaGTGTGTGGCCACATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NFQVSKPTTPGNRHPSECYTSSA*CVATCL Trigger: CAGACATGTGGCCACACAGCATGCTGAAGACGTGTA...GCACTCAGAAGGATGTCTGTTGCCTGGTGTGGTGGGTTTTGAAACTTGAAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| CDS-3UTR GCA 90 bp | CAAACAAAGCCTCTAGAGGACAGCAGAGTACAGCATCTTAATGGTAAGGAATTAAGCGAATGCCCCCAGTaGAGTACATCAGCACCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QTKPLEDSRVQHLNGKELSECPQ*STSAPS Trigger: AGAGGGTGCTGATGTACTGCACTGGGGGCATTCGCT...TAATTCCTTACCATTAAGATGCTGTACTCTGCTGTCCTCTAGAGGCTTTGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTACAGACACCAAGTGCCTGCCTGGTCATTTATGAGACAAATCAAATCACAACAAGCTGGCGGCATTaGGGAGTAGAGCAGAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CLQTPSACLVIYETNQITTSWRH*GVEQSL Trigger: CAAACTCTGCTCTACTCCCCAATGCCGCCAGCTTGT...TGTGATTTGATTTGTCTCATAAATGACCAGGCAGGCACTTGGTGTCTGTAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| CDS-3UTR CCA 90 bp | CTACAAACAAAGCCTCTAGAGGACAGCAGAGTACAGCATCTTAATGGTAAGGAATCTTTAAAACTGTCCTaGGAGGGGCCTGAAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQTKPLEDSRVQHLNGKESLKLS*EGPEAC Trigger: GCAGGCTTCAGGCCCCTCCCAGGACAGTTTTAAAGA...TTCCTTACCATTAAGATGCTGTACTCTGCTGTCCTCTAGAGGCTTTGTTTGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| CDS-3UTR TCA 90 bp | GTACAGCATCTTAATGGTAAGGAATTAGGAGATCCTGGCCAAACAACACACGGGGAACTTGTTTGGTTTTaGCCAAAAGGGCAAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VQHLNGKELGDPGQTTHGELVWF*PKGQRP Trigger: AGGCCTTTGCCCTTTTGGTCAAAACCAAACAAGTTC...CCCGTGTGTTGTTTGGCCAGGATCTCCTAATTCCTTACCATTAAGATGCTGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| CDS-3UTR TCA 90 bp | TGCTTACAGACACCAAGTGCCTGCCTGGTCATTTATGAGACAAATCAAATCACACATGTCTGTGGATGCTaGTCTGGTCTGCAAACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CLQTPSACLVIYETNQITHVCGC*SGLQTA Trigger: AGCTGTTTGCAGACCAGATCAGCATCCACAGACATG...TGTGATTTGATTTGTCTCATAAATGACCAGGCAGGCACTTGGTGTCTGTAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| CDS-3UTR TCA 90 bp | GTCTCTGGCCAACTACTCAGTAGTGCCATGATCACATATAGAAAAATGGGTTTGTGTGGATGCCACCCTTaGGCTGAAACACTTCCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: VSGQLLSSAMITYRKMGLCGCHP*AETLPY Trigger: GTAAGGAAGTGTTTCAGCTCAAGGGTGGCATCCACA...CAAACCCATTTTTCTATATGTGATCATGGCACTACTGAGTAGTTGGCCAGAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR TCA 90 bp | CATTTGGTCTATGTGTGGCTCTGTGTGCTTCTTAAGAATCGTGGGATAAGAATATTGCCCCCTTTGTCTTaGCACGTGACACAACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLVYVWLCVLLKNRGIRILPPLS*HVTQQA Trigger: AGCCTGTTGTGTCACGTGTCAAGACAAAGGGGGCAA...TATTCTTATCCCACGATTCTTAAGAAGCACACAGAGCCACACATAGACCAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR TCA 90 bp | AAAGAAAACTTACAGCCACATAAAAACATCTTCCTATACCACAGTGGGCAATGGATGGGCAGGAAAGCATaGCTTCCACGTAGAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KENLQPHKNIFLYHSGQWMGRKA*LPRRVW Trigger: CCAGACTCTACGTGGAAGTCATGCTTTCCTGCCCAT...CCATTGCCCACTGTGGTATAGGAAGATGTTTTTATGTGGCTGTAAGTTTTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| CDS-3UTR GCA 90 bp | GTTCCAGGCTGTAGCATCCTCTGGATCAAATGGCAAATCAGGCAGCTGACACTGAAATTCATAAGAGGGTaGTGGAACTTGTTTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VPGCSILWIKWQIRQLTLKFIRG*WNLFGF Trigger: AAAACCAAACAAGTTCCAGCACCCTCTTATGAATTT...CAGTGTCAGCTGCCTGATTTGCCATTTGATCCAGAGGATGCTACAGCCTGGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR GCA 90 bp | TTTAGTAAATGCTTCAAGGCACAAGGTGATCAGAGCCACAGAGCCTCAGGCAGTGGAATCGTCCTATTTTaGTTTCATAGAAGTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FSKCFKAQGDQSHRASGSGIVLF*FHRSSC Trigger: GCAGGAACTTCTATGAAAGCAAAATAGGACGATTCC...ACTGCCTGAGGCTCTGTGGCTCTGATCACCTTGTGCCTTGAAGCATTTACTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR TCA 90 bp | CAATATTATAGTAATGATAAGGCTCAAAAGCTGTTGAGCATAGCCAGGGGGCTTGAACTTGTTTGGTTTTaGCCAAAAGGGCAAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QYYSNDKAQKLLSIARGLELVWF*PKGQRP Trigger: AGGCCTTTGCCCTTTTGGTCAAAACCAAACAAGTTC...AAGCCCCCTGGCTATGCTCAACAGCTTTTGAGCCTTATCATTACTATAATATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR TCA 90 bp | CATTTGGTCTATGTGTGGCTCTGTGTGCTTCTTAAGAATCGTGGGATAAGAATAGCACCCTCTTCTGCCTaGAAATGTCAAGGTTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HLVYVWLCVLLKNRGIRIAPSSA*KCQGFC Trigger: ACAAAAACCTTGACATTTTCAGGCAGAAGAGGGTGC...TATTCTTATCCCACGATTCTTAAGAAGCACACAGAGCCACACATAGACCAAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTACAGACACCAAGTGCCTGCCTGGTCATTTATGAGACAAATCAAATCACAAAATTCATAAGAGGGTaGTGGAACTTGTTTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CLQTPSACLVIYETNQITKFIRG*WNLFGF Trigger: AAAACCAAACAAGTTCCAGCACCCTCTTATGAATTT...TGTGATTTGATTTGTCTCATAAATGACCAGGCAGGCACTTGGTGTCTGTAAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| CDS-3UTR GCA 90 bp | ATAGAAAAATGGGTTTGCAAATTTAGTAAATGCTTCAAGGCACAAGGTGATCAGATCAGCACCCTCTTCTaGCTGAAAATGTCAAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: IEKWVCKFSKCFKAQGDQISTLF*LKMSRF Trigger: AAACCTTGACATTTTCAGGCAGAAGAGGGTGCTGAT...CTGATCACCTTGTGCCTTGAAGCATTTACTAAATTTGCAAACCCATTTTTCTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR GCA 90 bp | ATAGAAAAATGGGTTTGCAAATTTAGTAAATGCTTCAAGGCACAAGGTGATCAGGGAATCGTCCTATTTTaGTTTCATAGAAGTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IEKWVCKFSKCFKAQGDQGIVLF*FHRSSC Trigger: GCAGGAACTTCTATGAAAGCAAAATAGGACGATTCC...CTGATCACCTTGTGCCTTGAAGCATTTACTAAATTTGCAAACCCATTTTTCTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS CCA 90 bp | AGGAGCACCTCTCCTTCCTCGTCACCCTGGCCACTCCTCAGCTCCTaGGGGCTAACATGGCTCACATCAGGAAGCCAAGCAGACACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RSTSPSSSPWPLLSS*GLTWLTSGSQADTS Trigger: GGAGGTGTCTGCTTGGCTTCCTGATGTGAGCCATGTTAGCCCCCAGGAGCTGAGGAGTGGCCAGGGTGACGAGGAAGGAGAGGTGCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR CAA 90 bp | AGGTGGCATCGGGGCCTCAGCACTGAGTGTCCACTGAGGCTGCACACGGGCCCAGGAGTAGAGCAGAGTTaGTATTGGTCCCATGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RWHRGLSTECPLRLHTGPGVEQS*YWSHGA Trigger: AGCCCCATGGGACCAATACAAACTCTGCTCTACTCC...TGGGCCCGTGTGCAGCCTCAGTGGACACTCAGTGCTGAGGCCCCGATGCCACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR CAA 90 bp | AGGTGGCATCGGGGCCTCAGCACTGAGTGTCCACTGAGGCTGCACACGGGCCCAAGAGGGTGCTGGAACTaGTTTGGTTTTGACCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RWHRGLSTECPLRLHTGPRGCWN*FGFDQK Trigger: CTTTTGGTCAAAACCAAACAAGTTCCAGCACCCTCT...TGGGCCCGTGTGCAGCCTCAGTGGACACTCAGTGCTGAGGCCCCGATGCCACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS GCA 90 bp | GAGGCACTCAATGCTGCAGTCAGCTGCTTCAGAAGAGACGCAGTCTaGTGGTACACGTCTTCAGCATGCTGTGTGGCCACATGTCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: EALNAAVSCFRRDAV*WYTSSACCVATCLW Trigger: CCACAGACATGTGGCCACACAGCATGCTGAAGACGTGTACCAGCAGACTGCGTCTCTTCTGAAGCAGCTGACTGCAGCATTGAGTGCCTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 ENSMUST00000147837.8 |
||
| CDS GCA 90 bp | CTTGAGCTGAAACACTTCCTTACACACTCCCTTGGCTCTGAGGTATaGGGAACCCCGCTCACAGCGAATGCCCCCAGTGCAGTACATCAG | + |
|
Preference number: 5 (lower is better) Translates to: LELKHFLTHSLGSEV*GTPLTANAPSAVHQ Trigger: CTGATGTACTGCACTGGGGGCATTCGCTGTGAGCGGGGTTCCGCATACCTCAGAGCCAAGGGAGTGTGTAAGGAAGTGTTTCAGCTCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS GCA 90 bp | CAGTGGCGTGACAGGTGGCAGCTCCACTTCTGGTCCATAAAAGCCTaGCATGTGAGTGCCTCCGTGCTCTCTTCCTCTTTAGTTCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: QWRDRWQLHFWSIKA*HVSASVLSSSLVPV Trigger: CACTGGAACTAAAGAGGAAGAGAGCACGGAGGCACTCACATGGCAGGCTTTTATGGACCAGAAGTGGAGCTGCCACCTGTCACGCCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129929.2 |
||
| CDS CCA 90 bp | TGTCCAACTGTTTTCCAGTGGCGTGACAGGTGGCAGCTCCACTTCTaGTCCATAAAAGCCTGCCATGTGAGTGCCTCCGTGCTCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CPTVFQWRDRWQLHF*SIKACHVSASVLSS Trigger: GGAAGAGAGCACGGAGGCACTCACATGGCAGGCTTTTATGGACCAGAAGTGGAGCTGCCACCTGTCACGCCACTGGAAAACAGTTGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129929.2 |
||
| CDS TCA 90 bp | TTGATTCCTTCAGTAGCAATCCGAATCTTGCCTGTAAGGTGCAGGTaGTGGCACAGAGCTGTCTGCCAGGCACAGACCCAATGGGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LIPSVAIRILPVRCR*WHRAVCQAQTQWGS Trigger: GGACCCCCATTGGGTCTGTGCCTGGCAGACAGCTCTGTGCCATCACCTGCACCTTACAGGCAAGATTCGGATTGCTACTGAAGGAATCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS GCA 90 bp | CAGGTGGCAGCTCCACTTCTGGTCCATAAAAGCCTGCCATGTGAGTaGCTCCGTGCTCTCTTCCTCTTTAGTTCCAGTGGGAACTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: QVAAPLLVHKSLPCE*LRALFLFSSSGNSG Trigger: TCCAGAGTTCCCACTGGAACTAAAGAGGAAGAGAGCACGGAGGCACTCACATGGCAGGCTTTTATGGACCAGAAGTGGAGCTGCCACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129929.2 |
||
| CDS CCA 90 bp | GCACTCAATGCTGCAGTCAGCTGCTTCAGAAGAGACGCAGTCTGCTaGTACACGTCTTCAGCATGCTGTGTGGCCACATGTCTGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: ALNAAVSCFRRDAVC*YTSSACCVATCLWM Trigger: CATCCACAGACATGTGGCCACACAGCATGCTGAAGACGTGTACCAGCAGACTGCGTCTCTTCTGAAGCAGCTGACTGCAGCATTGAGTGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 ENSMUST00000147837.8 |
||
| CDS-3UTR CAA 90 bp | CATGGCAACTTAAGTCTGCATGTGTCAGTGAATGCGGAACACCAGGCCCAGGTCCTTGCCCCCTTTGTCTaGACACGTGACACAACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: HGNLSLHVSVNAEHQAQVLAPFV*TRDTTG Trigger: GCCTGTTGTGTCACGTGTCAAGACAAAGGGGGCAAG...GACCTGGGCCTGGTGTTCCGCATTCACTGACACATGCAGACTTAAGTTGCCATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS TCA 90 bp | GGTACACGTCTTCAGCATGCTGTGTGGCCACATGTCTGTGGATGCTaGTCTGGTCTGCAAACAGCTGCTGACAACATCGCCACCGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GTRLQHAVWPHVCGC*SGLQTAADNIATVF Trigger: GAAAACGGTGGCGATGTTGTCAGCAGCTGTTTGCAGACCAGATCAGCATCCACAGACATGTGGCCACACAGCATGCTGAAGACGTGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 ENSMUST00000144495.2 ENSMUST00000147837.8 |
||
| CDS GCA 90 bp | AGCTGCTTCAGAAGAGACGCAGTCTGCTGGTACACGTCTTCAGCATaGTGTGTGGCCACATGTCTGTGGATGCTGATCTGGTCTGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SCFRRDAVCWYTSSA*CVATCLWMLIWSAN Trigger: GTTTGCAGACCAGATCAGCATCCACAGACATGTGGCCACACAGCATGCTGAAGACGTGTACCAGCAGACTGCGTCTCTTCTGAAGCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 ENSMUST00000147837.8 |
||
| CDS-3UTR CAA 90 bp | ACATGGCAACTTAAGTCTGCATGTGTCAGTGAATGCGGAACACCAGGCCCAGGTGGAGTGAGACAGTCTTaGGGGGAGCTCCTTTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TWQLKSACVSECGTPGPGGVRQS*GELLLS Trigger: AGACAAAAGGAGCTCCCCCAAAGACTGTCTCACTCC...ACCTGGGCCTGGTGTTCCGCATTCACTGACACATGCAGACTTAAGTTGCCATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS CCA 90 bp | GTCAACACAAGCTGGCGGCATTGGGGAGTAGAGCAGAGTTTGTATTaGTCCCATGGGGCTCCGCAGTATGAACATTCTGATACCACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VNTSWRHWGVEQSLY*SHGAPQYEHSDTTE Trigger: TTCTGTGGTATCAGAATGTTCATACTGCGGAGCCCCATGGGACCAATACAAACTCTGCTCTACTCCCCAATGCCGCCAGCTTGTGTTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR CAA 90 bp | CAGTATGGACAGTACAGGGTAACTAGAGGTGGCATCGGGGCCTCAGCACTGAGTCCATCTAACTCTGCTTaGAGACTGTTGCTGGGATTA | + |
|
Preference number: 5 (lower is better) Translates to: QYGQYRVTRGGIGASALSPSNSA*RLLLGL Trigger: TAATCCCAGCAACAGTCTCAAAGCAGAGTTAGATGG...ACTCAGTGCTGAGGCCCCGATGCCACCTCTAGTTACCCTGTACTGTCCATACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR CAA 90 bp | GTTCCAGGCTGTAGCATCCTCTGGATCAAATGGCAAATCAGGCAGCTGACACTGACAGGCTGTGAATCCTaGTCCTTGACAGGCAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: VPGCSILWIKWQIRQLTLTGCES*SLTGRT Trigger: TGTTCTGCCTGTCAAGGACAAGGATTCACAGCCTGT...CAGTGTCAGCTGCCTGATTTGCCATTTGATCCAGAGGATGCTACAGCCTGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS GCA 90 bp | TTCAGCATGCTGTGTGGCCACATGTCTGTGGATGCTGATCTGGTCTaGAAACAGCTGCTGACAACATCGCCACCGTTTTCCCTTAAATTC | + |
|
Preference number: 5 (lower is better) Translates to: FSMLCGHMSVDADLV*KQLLTTSPPFSLKF Trigger: GAATTTAAGGGAAAACGGTGGCGATGTTGTCAGCAGCTGTTTGCAGACCAGATCAGCATCCACAGACATGTGGCCACACAGCATGCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 ENSMUST00000144495.2 ENSMUST00000147837.8 |
||
| CDS-3UTR CAA 90 bp | GGGCCACCTCTTTCAGAGGACCTCTGTGAAGGGACAGAATATACTTTAGATTCTAGAGCAGAGTTTGTATaGGTCCCATGGGGCTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: GPPLSEDLCEGTEYTLDSRAEFV*VPWGSA Trigger: TGCGGAGCCCCATGGGACCAATACAAACTCTGCTCT...AGAATCTAAAGTATATTCTGTCCCTTCACAGAGGTCCTCTGAAAGAGGTGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR CAA 90 bp | GTTCCAGGCTGTAGCATCCTCTGGATCAAATGGCAAATCAGGCAGCTGACACTGAGAGGGTGCTGGAACTaGTTTGGTTTTGACCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VPGCSILWIKWQIRQLTLRGCWN*FGFDQK Trigger: CTTTTGGTCAAAACCAAACAAGTTCCAGCACCCTCT...CAGTGTCAGCTGCCTGATTTGCCATTTGATCCAGAGGATGCTACAGCCTGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR CAA 90 bp | GTTTGCAAATTTAGTAAATGCTTCAAGGCACAAGGTGATCAGAGCCACAGAGCCAGAGCAGAGTTTGTATaGGTCCCATGGGGCTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: VCKFSKCFKAQGDQSHRARAEFV*VPWGSA Trigger: TGCGGAGCCCCATGGGACCAATACAAACTCTGCTCT...GGCTCTGTGGCTCTGATCACCTTGTGCCTTGAAGCATTTACTAAATTTGCAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR CAA 90 bp | TATAGTAATGATAAGGCTCAAAAGCTGTTGAGCATAGCCAGGGGGCTTCTGACTCACAAGCTGGCGGCATaGGGGAGTAGAGCAGAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: YSNDKAQKLLSIARGLLTHKLAA*GSRAEF Trigger: AAACTCTGCTCTACTCCCCAATGCCGCCAGCTTGTG...AGTCAGAAGCCCCCTGGCTATGCTCAACAGCTTTTGAGCCTTATCATTACTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR CAA 90 bp | TATAGTAATGATAAGGCTCAAAAGCTGTTGAGCATAGCCAGGGGGCTTCTGACTCTTGCCCCCTTTGTCTaGACACGTGACACAACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: YSNDKAQKLLSIARGLLTLAPFV*TRDTTG Trigger: GCCTGTTGTGTCACGTGTCAAGACAAAGGGGGCAAG...AGTCAGAAGCCCCCTGGCTATGCTCAACAGCTTTTGAGCCTTATCATTACTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR CAA 90 bp | GTCTCTGGCCAACTACTCAGTAGTGCCATGATCACATATAGAAAAATGGGTTTGCACAAGCTGGCGGCATaGGGGAGTAGAGCAGAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VSGQLLSSAMITYRKMGLHKLAA*GSRAEF Trigger: AAACTCTGCTCTACTCCCCAATGCCGCCAGCTTGTG...CAAACCCATTTTTCTATATGTGATCATGGCACTACTGAGTAGTTGGCCAGAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR CAA 90 bp | AATTTTCAAGTTTCAAAACCCACCACACCAGGCAACAGACATCCTTCTGAGTGCAACTCTTCCAAGTACTaGTGGATGCCACCCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: NFQVSKPTTPGNRHPSECNSSKY*WMPPLS Trigger: GCTCAAGGGTGGCATCCACAAGTACTTGGAAGAGTT...GCACTCAGAAGGATGTCTGTTGCCTGGTGTGGTGGGTTTTGAAACTTGAAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| CDS-3UTR CAA 90 bp | TATAGTAATGATAAGGCTCAAAAGCTGTTGAGCATAGCCAGGGGGCTTCTGACTGGAACTTGTTTGGTTTaGACCAAAAGGGCAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: YSNDKAQKLLSIARGLLTGTCLV*TKRAKA Trigger: GGCCTTTGCCCTTTTGGTCAAAACCAAACAAGTTCC...AGTCAGAAGCCCCCTGGCTATGCTCAACAGCTTTTGAGCCTTATCATTACTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR CAA 90 bp | CATTTGGTCTATGTGTGGCTCTGTGTGCTTCTTAAGAATCGTGGGATAAGAATAGGAGTAGAGCAGAGTTaGTATTGGTCCCATGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HLVYVWLCVLLKNRGIRIGVEQS*YWSHGA Trigger: AGCCCCATGGGACCAATACAAACTCTGCTCTACTCC...TATTCTTATCCCACGATTCTTAAGAAGCACACAGAGCCACACATAGACCAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR CAA 90 bp | GTCTCTGGCCAACTACTCAGTAGTGCCATGATCACATATAGAAAAATGGGTTTGACAGGCTGTGAATCCTaGTCCTTGACAGGCAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: VSGQLLSSAMITYRKMGLTGCES*SLTGRT Trigger: TGTTCTGCCTGTCAAGGACAAGGATTCACAGCCTGT...CAAACCCATTTTTCTATATGTGATCATGGCACTACTGAGTAGTTGGCCAGAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR CAA 90 bp | CATTTGGTCTATGTGTGGCTCTGTGTGCTTCTTAAGAATCGTGGGATAAGAATAAACTCTTCCAAGTACTaGTGGATGCCACCCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: HLVYVWLCVLLKNRGIRINSSKY*WMPPLS Trigger: GCTCAAGGGTGGCATCCACAAGTACTTGGAAGAGTT...TATTCTTATCCCACGATTCTTAAGAAGCACACAGAGCCACACATAGACCAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS-3UTR CAA 90 bp | CCTAAGAATGAAAGACAAGCCACAGAATTTTCTAAGAGTCAGAAAGACACAGGACCATCTAACTCTGCTTaGAGACTGTTGCTGGGATTA | + |
|
Preference number: 5 (lower is better) Translates to: PKNERQATEFSKSQKDTGPSNSA*RLLLGL Trigger: TAATCCCAGCAACAGTCTCAAAGCAGAGTTAGATGG...TCCTGTGTCTTTCTGACTCTTAGAAAATTCTGTGGCTTGTCTTTCATTCTTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107772.8 |
||
| CDS CCA 72 bp | TCTCCTTCCTCGTCACCCTGGCCACTCCTCAGCTCCTaGGGGCTAACATGGCTCACATCAGGAAGCCAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SPSSSPWPLLSS*GLTWLTSGSQA Trigger: TGCTTGGCTTCCTGATGTGAGCCATGTTAGCCCCCAGGAGCTGAGGAGTGGCCAGGGTGACGAGGAAGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS TCA 72 bp | TGGGAGGGGCCTGAAGCCTGCTTGCCCCCTTTGTCTTaGCACGTGACACAACAGGCTGTGAATCCTTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: WEGPEACLPPLS*HVTQQAVNPCP Trigger: AGGACAAGGATTCACAGCCTGTTGTGTCACGTGTCAAGACAAAGGGGGCAAGCAGGCTTCAGGCCCCTCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS GCA 72 bp | AAACACTTCCTTACACACTCCCTTGGCTCTGAGGTATaGGGAACCCCGCTCACAGCGAATGCCCCCAGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: KHFLTHSLGSEV*GTPLTANAPSA Trigger: TGCACTGGGGGCATTCGCTGTGAGCGGGGTTCCGCATACCTCAGAGCCAAGGGAGTGTGTAAGGAAGTGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS CCA 72 bp | GTTTTCCAGTGGCGTGACAGGTGGCAGCTCCACTTCTaGTCCATAAAAGCCTGCCATGTGAGTGCCTCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: VFQWRDRWQLHF*SIKACHVSASV Trigger: CACGGAGGCACTCACATGGCAGGCTTTTATGGACCAGAAGTGGAGCTGCCACCTGTCACGCCACTGGAAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129929.2 |
||
| CDS CAA 90 bp | TCCTTGTCCTTGACAGGCAGAACAGGTCAACACAAGCTGGCGGCATaGGGGAGTAGAGCAGAGTTTGTATTGGTCCCATGGGGCTCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: SLSLTGRTGQHKLAA*GSRAEFVLVPWGSA Trigger: TGCGGAGCCCCATGGGACCAATACAAACTCTGCTCTACTCCCCAATGCCGCCAGCTTGTGTTGACCTGTTCTGCCTGTCAAGGACAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS CCA 72 bp | GCTGCAGTCAGCTGCTTCAGAAGAGACGCAGTCTGCTaGTACACGTCTTCAGCATGCTGTGTGGCCACATGT | + |
|
Preference number: 6 (lower is better) Translates to: AAVSCFRRDAVC*YTSSACCVATC Trigger: ACATGTGGCCACACAGCATGCTGAAGACGTGTACCAGCAGACTGCGTCTCTTCTGAAGCAGCTGACTGCAGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 ENSMUST00000147837.8 |
||
| CDS TCA 72 bp | CTTCAGCATGCTGTGTGGCCACATGTCTGTGGATGCTaGTCTGGTCTGCAAACAGCTGCTGACAACATCGCC | + |
|
Preference number: 6 (lower is better) Translates to: LQHAVWPHVCGC*SGLQTAADNIA Trigger: GGCGATGTTGTCAGCAGCTGTTTGCAGACCAGATCAGCATCCACAGACATGTGGCCACACAGCATGCTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 ENSMUST00000144495.2 ENSMUST00000147837.8 |
||
| CDS TCA 72 bp | ACATGGCTCACATCAGGAAGCCAAGCAGACACCTCCTaGCTAGGAGTGAGACAGTCTTTGGGGGAGCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: TWLTSGSQADTS*LGVRQSLGELL Trigger: AAGGAGCTCCCCCAAAGACTGTCTCACTCCTAGTCAGGAGGTGTCTGCTTGGCTTCCTGATGTGAGCCATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS GCA 72 bp | AGAAGAGACGCAGTCTGCTGGTACACGTCTTCAGCATaGTGTGTGGCCACATGTCTGTGGATGCTGATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RRDAVCWYTSSA*CVATCLWMLIW Trigger: CCAGATCAGCATCCACAGACATGTGGCCACACAGCATGCTGAAGACGTGTACCAGCAGACTGCGTCTCTTCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 ENSMUST00000147837.8 |
||
| CDS GCA 72 bp | GTAAGGCTCTGTGAGGCACTCAATGCTGCAGTCAGCTaGTTCAGAAGAGACGCAGTCTGCTGGTACACGTCT | + |
|
Preference number: 6 (lower is better) Translates to: VRLCEALNAAVS*FRRDAVCWYTS Trigger: AGACGTGTACCAGCAGACTGCGTCTCTTCTGAAGCAGCTGACTGCAGCATTGAGTGCCTCACAGAGCCTTAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 ENSMUST00000147837.8 |
||
| CDS GCA 72 bp | GCTCCACTTCTGGTCCATAAAAGCCTGCCATGTGAGTaGCTCCGTGCTCTCTTCCTCTTTAGTTCCAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: APLLVHKSLPCE*LRALFLFSSSG Trigger: CCCACTGGAACTAAAGAGGAAGAGAGCACGGAGGCACTCACATGGCAGGCTTTTATGGACCAGAAGTGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129929.2 |
||
| CDS CAA 90 bp | CCCTTTGTCTTGACACGTGACACAACAGGCTGTGAATCCTTGTCCTaGACAGGCAGAACAGGTCAACACAAGCTGGCGGCATTGGGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: PFVLTRDTTGCESLS*TGRTGQHKLAALGS Trigger: ACTCCCCAATGCCGCCAGCTTGTGTTGACCTGTTCTGCCTGTCAAGGACAAGGATTCACAGCCTGTTGTGTCACGTGTCAAGACAAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS CAA 90 bp | CTTGCCCCCTTTGTCTTGACACGTGACACAACAGGCTGTGAATCCTaGTCCTTGACAGGCAGAACAGGTCAACACAAGCTGGCGGCATTG | + |
|
Preference number: 6 (lower is better) Translates to: LAPFVLTRDTTGCES*SLTGRTGQHKLAAL Trigger: CAATGCCGCCAGCTTGTGTTGACCTGTTCTGCCTGTCAAGGACAAGGATTCACAGCCTGTTGTGTCACGTGTCAAGACAAAGGGGGCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS CCA 72 bp | AGCTGGCGGCATTGGGGAGTAGAGCAGAGTTTGTATTaGTCCCATGGGGCTCCGCAGTATGAACATTCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: SWRHWGVEQSLY*SHGAPQYEHSD Trigger: ATCAGAATGTTCATACTGCGGAGCCCCATGGGACCAATACAAACTCTGCTCTACTCCCCAATGCCGCCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS CAA 72 bp | AACACAAGCTGGCGGCATTGGGGAGTAGAGCAGAGTTaGTATTGGTCCCATGGGGCTCCGCAGTATGAACAT | + |
|
Preference number: 6 (lower is better) Translates to: NTSWRHWGVEQS*YWSHGAPQYEH Trigger: ATGTTCATACTGCGGAGCCCCATGGGACCAATACAAACTCTGCTCTACTCCCCAATGCCGCCAGCTTGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS CAA 72 bp | TTGACAGGCAGAACAGGTCAACACAAGCTGGCGGCATaGGGGAGTAGAGCAGAGTTTGTATTGGTCCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: LTGRTGQHKLAA*GSRAEFVLVPW Trigger: CCATGGGACCAATACAAACTCTGCTCTACTCCCCAATGCCGCCAGCTTGTGTTGACCTGTTCTGCCTGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS CAA 72 bp | TTGACACGTGACACAACAGGCTGTGAATCCTTGTCCTaGACAGGCAGAACAGGTCAACACAAGCTGGCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LTRDTTGCESLS*TGRTGQHKLAA Trigger: TGCCGCCAGCTTGTGTTGACCTGTTCTGCCTGTCAAGGACAAGGATTCACAGCCTGTTGTGTCACGTGTCAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS CAA 90 bp | GAACAGGTCAACACAAGCTGGCGGCATTGGGGAGTAGAGCAGAGTTaGTATTGGTCCCATGGGGCTCCGCAGTATGAACATTCTGATACC | + |
|
Preference number: 6 (lower is better) Translates to: EQVNTSWRHWGVEQS*YWSHGAPQYEHSDT Trigger: GGTATCAGAATGTTCATACTGCGGAGCCCCATGGGACCAATACAAACTCTGCTCTACTCCCCAATGCCGCCAGCTTGTGTTGACCTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS CAA 90 bp | CCAAATCCATTTCCCTTCTTCCTGGGGTGCTGTATTTCCCAGCCTTaGCAATTAGGCTGTCCAACTGTTTTCCAGTGGCGTGACAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PNPFPFFLGCCISQP*QLGCPTVFQWRDRW Trigger: CCACCTGTCACGCCACTGGAAAACAGTTGGACAGCCTAATTGCAAAGGCTGGGAAATACAGCACCCCAGGAAGAAGGGAAATGGATTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129929.2 |
||
| CDS CAA 72 bp | AGTCTGGTGGCCACTTTGCTTCCGCCAACAGTTCCATaGATTCCTTCAGTAGCAATCCGAATCTTGCCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: SLVATLLPPTVP*IPSVAIRILPV Trigger: TACAGGCAAGATTCGGATTGCTACTGAAGGAATCAATGGAACTGTTGGCGGAAGCAAAGTGGCCACCAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||
| CDS CAA 72 bp | TTTGTCTTGACACGTGACACAACAGGCTGTGAATCCTaGTCCTTGACAGGCAGAACAGGTCAACACAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FVLTRDTTGCES*SLTGRTGQHKL Trigger: CAGCTTGTGTTGACCTGTTCTGCCTGTCAAGGACAAGGATTCACAGCCTGTTGTGTCACGTGTCAAGACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107770.2 ENSMUST00000107772.8 |
||