Pregenerated sensors for TST (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044986Ensembl transcript IDs: ENSMUST00000058659.9
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | CCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACTaGCTGGATTGGGTGGGCAGAGGAGGAGGCTGCACA | + |
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Preference number: 3 (lower is better) Translates to: PTAGHTNLPEGN*LDWVGRGGGCT Trigger: TGTGCAGCCTCCTCCTCTGCCCACCCAATCCAGCCAGTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR TCA 90 bp | AACCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACTGGCTGGATTGGGTGGGCAGCCAGGGCAACGTaGCAGGCAGTGACCCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: NLQQVTPTSLKGTGWIGWAARAT*QAVTPL Trigger: CAAGGGGGTCACTGCCTGTCACGTTGCCCTGGCTGC...CCACCCAATCCAGCCAGTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR CCA 90 bp | CCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACTGGCTGGATTGGGTGGGCATTCCGCCAGCCACTTaGTGGATACCAGCGCCCGGT | + |
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Preference number: 4 (lower is better) Translates to: PTAGHTNLPEGNWLDWVGIPPAT*WIPAPG Trigger: ACCGGGCGCTGGTATCCACCAAGTGGCTGGCGGAAT...GCCCACCCAATCCAGCCAGTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR CCA 90 bp | CCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACTGGCTGGATTGGGTGGGCGGCACGCAGCTCCTCTaGGCTCTTCTCGAAGCCATC | + |
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Preference number: 4 (lower is better) Translates to: PTAGHTNLPEGNWLDWVGGTQLL*ALLEAI Trigger: GATGGCTTCGAGAAGAGCCCAGAGGAGCTGCGTGCC...GCCCACCCAATCCAGCCAGTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR CCA 90 bp | AACCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACTGGCTGGATTGGGTGGGGACACACGGGTCTCTaGGGGTGCCCTGCGGAACCA | + |
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Preference number: 4 (lower is better) Translates to: NLQQVTPTSLKGTGWIGWGHTGL*GCPAEP Trigger: TGGTTCCGCAGGGCACCCCCAGAGACCCGTGTGTCC...CCACCCAATCCAGCCAGTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR TCA 90 bp | CGTAGCCTAAAAGGTGAACCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACCTGGCGGGTCCCGGGTaGGTACCAAGACGCGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: RSLKGEPTAGHTNLPEGNLAGPG*VPRRVQ Trigger: CTGGACGCGTCTTGGTACTCACCCGGGACCCGCCAG...GTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGGTTCACCTTTTAGGCTACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR TCA 90 bp | CCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACTGGCTGGATTGGGTGGGCGCCACCATTGAGCACTaGCACTGTGCGGTGGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: PTAGHTNLPEGNWLDWVGATIEH*HCAVAK Trigger: TTTGGCCACCGCACAGTGTCAGTGCTCAATGGTGGC...GCCCACCCAATCCAGCCAGTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR TCA 90 bp | CCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACTGGCTGGATTGGGTGGGCTCCGGAAGCCACCATTaGGCACTGACACTGTGCGGT | + |
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Preference number: 4 (lower is better) Translates to: PTAGHTNLPEGNWLDWVGSGSHH*ALTLCG Trigger: ACCGCACAGTGTCAGTGCTCAATGGTGGCTTCCGGA...GCCCACCCAATCCAGCCAGTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR GCA 90 bp | AACCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACTGGCTGGATTGGGTGGTCTCTGGGGGTGCCCTaGGGAACCACTCTGACCAGG | + |
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Preference number: 4 (lower is better) Translates to: NLQQVTPTSLKGTGWIGWSLGVP*GTTLTR Trigger: CCTGGTCAGAGTGGTTCCGCAGGGCACCCCCAGAGA...CCACCCAATCCAGCCAGTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR CCA 90 bp | AACCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACTGGCTGGATTGGGTGGGGCGGCCAGACCGAATaGATTCCGCCAGCCACTTGG | + |
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Preference number: 4 (lower is better) Translates to: NLQQVTPTSLKGTGWIGWGGQTE*IPPATW Trigger: CCAAGTGGCTGGCGGAATCCATTCGGTCTGGCCGCC...CCACCCAATCCAGCCAGTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR CCA 90 bp | CCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACTGGCTGGATTGGGTGGGCTCAGATGTCACCGGGTaGCCCTCCTTCAGCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PTAGHTNLPEGNWLDWVGSDVTG*PSFSQF Trigger: GAACTGGCTGAAGGAGGGCCACCCGGTGACATCTGA...GCCCACCCAATCCAGCCAGTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR TCA 90 bp | CGTAGCCTAAAAGGTGAACCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACCAACGTGACAGGCAGTaGCCCCCTTGCGGCACGTGG | + |
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Preference number: 4 (lower is better) Translates to: RSLKGEPTAGHTNLPEGNQRDRQ*PPCGTW Trigger: CCACGTGCCGCAAGGGGGTCACTGCCTGTCACGTTG...GTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGGTTCACCTTTTAGGCTACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR CCA 90 bp | CCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACTGGCTGGATTGGGTGGGCTCTTGTCCTGGAATATaGCACGCAGCTCCTCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: PTAGHTNLPEGNWLDWVGSCPGI*HAAPLG Trigger: GCCCAGAGGAGCTGCGTGCCATATTCCAGGACAAGA...GCCCACCCAATCCAGCCAGTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR TCA 90 bp | CCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACTGGCTGGATTGGGTGGGCCCTGCTCATAGGTCTTaGGCAGGGAGAGATTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: PTAGHTNLPEGNWLDWVGPAHRS*AGRDSV Trigger: CACTGAATCTCTCCCTGCTCAAGACCTATGAGCAGG...GCCCACCCAATCCAGCCAGTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR TCA 90 bp | CGTAGCCTAAAAGGTGAACCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACTGCGGCACGTGGCAATaGGGGGCTGTGAGAGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: RSLKGEPTAGHTNLPEGNCGTWQ*GAVRGP Trigger: TGGACCTCTCACAGCCCCTCATTGCCACGTGCCGCA...GTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGGTTCACCTTTTAGGCTACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR TCA 90 bp | AACCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACTGGCTGGATTGGGTGGCCTGCGGAACCACTCTaGCCAGGAGCCATCGTAAAC | + |
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Preference number: 4 (lower is better) Translates to: NLQQVTPTSLKGTGWIGWPAEPL*PGAIVN Trigger: GTTTACGATGGCTCCTGGTCAGAGTGGTTCCGCAGG...CCACCCAATCCAGCCAGTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR CCA 90 bp | CGTAGCCTAAAAGGTGAACCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACCCGCCAGCCACTTGGTaGATACCAGCGCCCGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: RSLKGEPTAGHTNLPEGNPPATW*IPAPGR Trigger: TCTACCGGGCGCTGGTATCCACCAAGTGGCTGGCGG...GTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGGTTCACCTTTTAGGCTACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR TCA 90 bp | AACCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACTGGCTGGATTGGGTGGGATTCAGTGTGGCTTTaGAAACGGCTGGCTCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: NLQQVTPTSLKGTGWIGWDSVWL*KRLALA Trigger: GGCCAGAGCCAGCCGTTTTCAAAGCCACACTGAATC...CCACCCAATCCAGCCAGTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR TCA 90 bp | CGTAGCCTAAAAGGTGAACCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACGAAGGGCATGTTGACTaGGCCACGGATGTGGCCCGA | + |
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Preference number: 4 (lower is better) Translates to: RSLKGEPTAGHTNLPEGNEGHVD*ATDVAR Trigger: TCGGGCCACATCCGTGGCTCAGTCAACATGCCCTTC...GTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGGTTCACCTTTTAGGCTACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR GCA 90 bp | AACCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACTGGCTGGATTGGGTGGCAGCCACATCGGGTTTaGCACAAAGGTAGGCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: NLQQVTPTSLKGTGWIGWQPHRV*HKGRQP Trigger: TGGCTGCCTACCTTTGTGGCAAACCCGATGTGGCTG...CCACCCAATCCAGCCAGTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR CCA 90 bp | CCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACTGGCTGGATTGGGTGGGCCGAGAGTCCACCAGCTaGAACCTTTTAGACTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: PTAGHTNLPEGNWLDWVGRESTS*NLLDWR Trigger: TCTCCAGTCTAAAAGGTTCCAGCTGGTGGACTCTCG...GCCCACCCAATCCAGCCAGTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR CCA 90 bp | CGTAGCCTAAAAGGTGAACCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACTTCCCACTCTTCCCCTaGGACACACGGGTCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: RSLKGEPTAGHTNLPEGNFPLFP*DTRVSG Trigger: CCCAGAGACCCGTGTGTCCCAGGGGAAGAGTGGGAA...GTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGGTTCACCTTTTAGGCTACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR TCA 90 bp | CGTAGCCTAAAAGGTGAACCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACGGCAATGAGGGGCTGTaGGAGGTCCACCTTCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: RSLKGEPTAGHTNLPEGNGNEGL*EVHLLV Trigger: GACAAGAAGGTGGACCTCTCACAGCCCCTCATTGCC...GTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGGTTCACCTTTTAGGCTACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR GCA 90 bp | CGTAGCCTAAAAGGTGAACCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACCCACCAGACTCTGGGTaGATAGAAGCTGCCCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: RSLKGEPTAGHTNLPEGNPPDSG*IEAAQV Trigger: GACCTGGGCAGCTTCTATGCACCCAGAGTCTGGTGG...GTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGGTTCACCTTTTAGGCTACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR CCA 90 bp | CCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACTGGCTGGATTGGGTGGGCTGGAACCTTTTAGACTaGAGATTCTCTAGGACCTGC | + |
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Preference number: 4 (lower is better) Translates to: PTAGHTNLPEGNWLDWVGWNLLD*RFSRTC Trigger: GCAGGTCCTAGAGAATCTCCAGTCTAAAAGGTTCCA...GCCCACCCAATCCAGCCAGTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR GCA 90 bp | CGTAGCCTAAAAGGTGAACCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACTGGGTGCATAGAAGCTaGCCAGGTCATCTCCATCGT | + |
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Preference number: 4 (lower is better) Translates to: RSLKGEPTAGHTNLPEGNWVHRS*PGHLHR Trigger: ACGATGGAGATGACCTGGGCAGCTTCTATGCACCCA...GTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGGTTCACCTTTTAGGCTACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR CCA 90 bp | CGTAGCCTAAAAGGTGAACCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACACATCCACCAGACTCTaGGTGCATAGAAGCTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: RSLKGEPTAGHTNLPEGNTSTRL*VHRSCP Trigger: TGGGCAGCTTCTATGCACCCAGAGTCTGGTGGATGT...GTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGGTTCACCTTTTAGGCTACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR CCA 90 bp | CGTAGCCTAAAAGGTGAACCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACACTGACACTGTGCGGTaGCCAAACACACGAAACATC | + |
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Preference number: 4 (lower is better) Translates to: RSLKGEPTAGHTNLPEGNTDTVR*PNTRNI Trigger: GATGTTTCGTGTGTTTGGCCACCGCACAGTGTCAGT...GTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGGTTCACCTTTTAGGCTACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS CCA 90 bp | GGCGGGTCCCGGGTGAGTACCAAGACGCGTCCAGCACCCGAAGGCTaGGCCCCAGGCGGCCAGACCGAATGGATTCCGCCAGCCACTTGG | + |
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Preference number: 5 (lower is better) Translates to: GGSRVSTKTRPAPEG*APGGQTEWIPPATW Trigger: CCAAGTGGCTGGCGGAATCCATTCGGTCTGGCCGCCTGGGGCCCAGCCTTCGGGTGCTGGACGCGTCTTGGTACTCACCCGGGACCCGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS TCA 90 bp | CACGTGTCGCTCCTGGTACTCTTTGCGTGCCTGGCGGGTCCCGGGTaGGTACCAAGACGCGTCCAGCACCCGAAGGCTGGGCCCCAGGCG | + |
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Preference number: 5 (lower is better) Translates to: HVSLLVLFACLAGPG*VPRRVQHPKAGPQA Trigger: CGCCTGGGGCCCAGCCTTCGGGTGCTGGACGCGTCTTGGTACTCACCCGGGACCCGCCAGGCACGCAAAGAGTACCAGGAGCGACACGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS CCA 90 bp | ACGCGTCCAGCACCCGAAGGCTGGGCCCCAGGCGGCCAGACCGAATaGATTCCGCCAGCCACTTGGTGGATACCAGCGCCCGGTAGAGCA | + |
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Preference number: 5 (lower is better) Translates to: TRPAPEGWAPGGQTE*IPPATWWIPAPGRA Trigger: TGCTCTACCGGGCGCTGGTATCCACCAAGTGGCTGGCGGAATCCATTCGGTCTGGCCGCCTGGGGCCCAGCCTTCGGGTGCTGGACGCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS CCA 90 bp | AAGGACGCGCCAGGCACGTGTCGCTCCTGGTACTCTTTGCGTGCCTaGCGGGTCCCGGGTGAGTACCAAGACGCGTCCAGCACCCGAAGG | + |
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Preference number: 5 (lower is better) Translates to: KDAPGTCRSWYSLRA*RVPGEYQDASSTRR Trigger: CCTTCGGGTGCTGGACGCGTCTTGGTACTCACCCGGGACCCGCCAGGCACGCAAAGAGTACCAGGAGCGACACGTGCCTGGCGCGTCCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS GCA 90 bp | CCTTCCCACTCTTCCCCTGGGACACACGGGTCTCTGGGGGTGCCCTaGGGAACCACTCTGACCAGGAGCCATCGTAAACAGCCACATCGG | + |
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Preference number: 5 (lower is better) Translates to: PSHSSPGTHGSLGVP*GTTLTRSHRKQPHR Trigger: CCGATGTGGCTGTTTACGATGGCTCCTGGTCAGAGTGGTTCCGCAGGGCACCCCCAGAGACCCGTGTGTCCCAGGGGAAGAGTGGGAAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR CAA 90 bp | CCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACTGGCTGGATTGGGTGGGCGATTCCGCCAGCCACTaGGTGGATACCAGCGCCCGG | + |
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Preference number: 5 (lower is better) Translates to: PTAGHTNLPEGNWLDWVGDSASH*VDTSAR Trigger: CCGGGCGCTGGTATCCACCAAGTGGCTGGCGGAATC...GCCCACCCAATCCAGCCAGTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR CAA 90 bp | CCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACTGGCTGGATTGGGTGGGCCAGGCAGTGACCCCCTaGCGGCACGTGGCAATGAGG | + |
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Preference number: 5 (lower is better) Translates to: PTAGHTNLPEGNWLDWVGQAVTP*RHVAMR Trigger: CCTCATTGCCACGTGCCGCAAGGGGGTCACTGCCTG...GCCCACCCAATCCAGCCAGTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS GCA 90 bp | TATCAAAGAAGGACGCGCCAGGCACGTGTCGCTCCTGGTACTCTTTaGGTGCCTGGCGGGTCCCGGGTGAGTACCAAGACGCGTCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: YQRRTRQARVAPGTL*VPGGSRVSTKTRPA Trigger: TGCTGGACGCGTCTTGGTACTCACCCGGGACCCGCCAGGCACGCAAAGAGTACCAGGAGCGACACGTGCCTGGCGCGTCCTTCTTTGATA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS GCA 90 bp | GGATGTGGCCCGAGTCTAGTCCTACTATATCCGGCTCCGGTTGTGTaGCCAGGTACCGTCCTTGGGCCCGAGAGTCCACCAGCTGGAACC | + |
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Preference number: 5 (lower is better) Translates to: GCGPSLVLLYPAPVV*PGTVLGPESPPAGT Trigger: GGTTCCAGCTGGTGGACTCTCGGGCCCAAGGACGGTACCTGGGCACACAACCGGAGCCGGATATAGTAGGACTAGACTCGGGCCACATCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS CCA 90 bp | TTGAAAACGGCTGGCTCTGGCCTCGAGGGCTCAGATGTCACCGGGTaGCCCTCCTTCAGCCAGTTCCGGAAGCCACCATTGAGCACTGAC | + |
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Preference number: 5 (lower is better) Translates to: LKTAGSGLEGSDVTG*PSFSQFRKPPLSTD Trigger: GTCAGTGCTCAATGGTGGCTTCCGGAACTGGCTGAAGGAGGGCCACCCGGTGACATCTGAGCCCTCGAGGCCAGAGCCAGCCGTTTTCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS TCA 90 bp | ATGTCACCGGGTGGCCCTCCTTCAGCCAGTTCCGGAAGCCACCATTaGGCACTGACACTGTGCGGTGGCCAAACACACGAAACATCCACC | + |
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Preference number: 5 (lower is better) Translates to: MSPGGPPSASSGSHH*ALTLCGGQTHETST Trigger: GGTGGATGTTTCGTGTGTTTGGCCACCGCACAGTGTCAGTGCTCAATGGTGGCTTCCGGAACTGGCTGAAGGAGGGCCACCCGGTGACAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS CCA 90 bp | CATTCCTCTATATCAAAGAAGGACGCGCCAGGCACGTGTCGCTCCTaGTACTCTTTGCGTGCCTGGCGGGTCCCGGGTGAGTACCAAGAC | + |
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Preference number: 5 (lower is better) Translates to: HSSISKKDAPGTCRS*YSLRAWRVPGEYQD Trigger: GTCTTGGTACTCACCCGGGACCCGCCAGGCACGCAAAGAGTACCAGGAGCGACACGTGCCTGGCGCGTCCTTCTTTGATATAGAGGAATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS CCA 90 bp | TGCTTATGCCCAGGTTGCCCACATAGTCCCCAAAGTGGGCCTCACTaGGCAGCATCATCTCATAAGGCGAAGTCGTGTCCCGGCATTCCT | + |
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Preference number: 5 (lower is better) Translates to: CLCPGCPHSPQSGPH*AASSHKAKSCPGIP Trigger: AGGAATGCCGGGACACGACTTCGCCTTATGAGATGATGCTGCCCAGTGAGGCCCACTTTGGGGACTATGTGGGCAACCTGGGCATAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS CCA 90 bp | AGTCCTACTATATCCGGCTCCGGTTGTGTGCCCAGGTACCGTCCTTaGGCCCGAGAGTCCACCAGCTGGAACCTTTTAGACTGGAGATTC | + |
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Preference number: 5 (lower is better) Translates to: SPTISGSGCVPRYRP*ARESTSWNLLDWRF Trigger: GAATCTCCAGTCTAAAAGGTTCCAGCTGGTGGACTCTCGGGCCCAAGGACGGTACCTGGGCACACAACCGGAGCCGGATATAGTAGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS CCA 90 bp | TTCGTCAGGAAGTCCATGAAGGGCATGTTGACTGAGCCACGGATGTaGCCCGAGTCTAGTCCTACTATATCCGGCTCCGGTTGTGTGCCC | + |
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Preference number: 5 (lower is better) Translates to: FVRKSMKGMLTEPRM*PESSPTISGSGCVP Trigger: GGGCACACAACCGGAGCCGGATATAGTAGGACTAGACTCGGGCCACATCCGTGGCTCAGTCAACATGCCCTTCATGGACTTCCTGACGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS GCA 90 bp | AGCTGCCCAGGTCATCTCCATCGTATACCACCACATGTGTGTCGTTaGTTATGCCCAGGTTGCCCACATAGTCCCCAAAGTGGGCCTCAC | + |
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Preference number: 5 (lower is better) Translates to: SCPGHLHRIPPHVCR*LCPGCPHSPQSGPH Trigger: GTGAGGCCCACTTTGGGGACTATGTGGGCAACCTGGGCATAAGCAACGACACACATGTGGTGGTATACGATGGAGATGACCTGGGCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR CAA 90 bp | CGTAGCCTAAAAGGTGAACCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACTTCCGGAAGCCACCATaGAGCACTGACACTGTGCGG | + |
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Preference number: 5 (lower is better) Translates to: RSLKGEPTAGHTNLPEGNFRKPP*STDTVR Trigger: CCGCACAGTGTCAGTGCTCAATGGTGGCTTCCGGAA...GTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGGTTCACCTTTTAGGCTACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR CAA 90 bp | AACCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACTGGCTGGATTGGGTGGAGATTCAGTGTGGCTTaGAAAACGGCTGGCTCTGGC | + |
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Preference number: 5 (lower is better) Translates to: NLQQVTPTSLKGTGWIGWRFSVA*KTAGSG Trigger: GCCAGAGCCAGCCGTTTTCAAAGCCACACTGAATCT...CCACCCAATCCAGCCAGTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS GCA 90 bp | CTCCATCGTATACCACCACATGTGTGTCGTTGCTTATGCCCAGGTTaGCCACATAGTCCCCAAAGTGGGCCTCACTGGGCAGCATCATCT | + |
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Preference number: 5 (lower is better) Translates to: LHRIPPHVCRCLCPG*PHSPQSGPHWAASS Trigger: AGATGATGCTGCCCAGTGAGGCCCACTTTGGGGACTATGTGGGCAACCTGGGCATAAGCAACGACACACATGTGGTGGTATACGATGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS GCA 90 bp | CACTGTGCGGTGGCCAAACACACGAAACATCCACCAGACTCTGGGTaGATAGAAGCTGCCCAGGTCATCTCCATCGTATACCACCACATG | + |
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Preference number: 5 (lower is better) Translates to: HCAVAKHTKHPPDSG*IEAAQVISIVYHHM Trigger: CATGTGGTGGTATACGATGGAGATGACCTGGGCAGCTTCTATGCACCCAGAGTCTGGTGGATGTTTCGTGTGTTTGGCCACCGCACAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS-3UTR CAA 90 bp | CGTAGCCTAAAAGGTGAACCTACAGCAGGTCACACCAACCTCCCTGAAGGGAACTCCATGAAGGGCATGTaGACTGAGCCACGGATGTGG | + |
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Preference number: 5 (lower is better) Translates to: RSLKGEPTAGHTNLPEGNSMKGM*TEPRMW Trigger: CCACATCCGTGGCTCAGTCAACATGCCCTTCATGGA...GTTCCCTTCAGGGAGGTTGGTGTGACCTGCTGTAGGTTCACCTTTTAGGCTACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS GCA 90 bp | GGCCAAACACACGAAACATCCACCAGACTCTGGGTGCATAGAAGCTaGCCAGGTCATCTCCATCGTATACCACCACATGTGTGTCGTTGC | + |
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Preference number: 5 (lower is better) Translates to: GQTHETSTRLWVHRS*PGHLHRIPPHVCRC Trigger: GCAACGACACACATGTGGTGGTATACGATGGAGATGACCTGGGCAGCTTCTATGCACCCAGAGTCTGGTGGATGTTTCGTGTGTTTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS CCA 72 bp | GCACCCGAAGGCTGGGCCCCAGGCGGCCAGACCGAATaGATTCCGCCAGCCACTTGGTGGATACCAGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: APEGWAPGGQTE*IPPATWWIPAP Trigger: GGGCGCTGGTATCCACCAAGTGGCTGGCGGAATCCATTCGGTCTGGCCGCCTGGGGCCCAGCCTTCGGGTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS CCA 72 bp | CGGGTGAGTACCAAGACGCGTCCAGCACCCGAAGGCTaGGCCCCAGGCGGCCAGACCGAATGGATTCCGCCA | + |
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Preference number: 6 (lower is better) Translates to: RVSTKTRPAPEG*APGGQTEWIPP Trigger: TGGCGGAATCCATTCGGTCTGGCCGCCTGGGGCCCAGCCTTCGGGTGCTGGACGCGTCTTGGTACTCACCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS TCA 72 bp | CTCCTGGTACTCTTTGCGTGCCTGGCGGGTCCCGGGTaGGTACCAAGACGCGTCCAGCACCCGAAGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: LLVLFACLAGPG*VPRRVQHPKAG Trigger: CCCAGCCTTCGGGTGCTGGACGCGTCTTGGTACTCACCCGGGACCCGCCAGGCACGCAAAGAGTACCAGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS GCA 72 bp | AGGACGCGCCAGGCACGTGTCGCTCCTGGTACTCTTTaGGTGCCTGGCGGGTCCCGGGTGAGTACCAAGACG | + |
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Preference number: 6 (lower is better) Translates to: RTRQARVAPGTL*VPGGSRVSTKT Trigger: CGTCTTGGTACTCACCCGGGACCCGCCAGGCACGCAAAGAGTACCAGGAGCGACACGTGCCTGGCGCGTCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS CCA 72 bp | CCAGGCACGTGTCGCTCCTGGTACTCTTTGCGTGCCTaGCGGGTCCCGGGTGAGTACCAAGACGCGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: PGTCRSWYSLRA*RVPGEYQDASS Trigger: GCTGGACGCGTCTTGGTACTCACCCGGGACCCGCCAGGCACGCAAAGAGTACCAGGAGCGACACGTGCCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS CAA 72 bp | AAGGACGCGCCAGGCACGTGTCGCTCCTGGTACTCTTaGCGTGCCTGGCGGGTCCCGGGTGAGTACCAAGAC | + |
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Preference number: 6 (lower is better) Translates to: KDAPGTCRSWYS*RAWRVPGEYQD Trigger: GTCTTGGTACTCACCCGGGACCCGCCAGGCACGCAAAGAGTACCAGGAGCGACACGTGCCTGGCGCGTCCTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS CAA 90 bp | ATATCAAAGAAGGACGCGCCAGGCACGTGTCGCTCCTGGTACTCTTaGCGTGCCTGGCGGGTCCCGGGTGAGTACCAAGACGCGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: ISKKDAPGTCRSWYS*RAWRVPGEYQDASS Trigger: GCTGGACGCGTCTTGGTACTCACCCGGGACCCGCCAGGCACGCAAAGAGTACCAGGAGCGACACGTGCCTGGCGCGTCCTTCTTTGATAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS GCA 72 bp | TCTTCCCCTGGGACACACGGGTCTCTGGGGGTGCCCTaGGGAACCACTCTGACCAGGAGCCATCGTAAACAG | + |
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Preference number: 6 (lower is better) Translates to: SSPGTHGSLGVP*GTTLTRSHRKQ Trigger: CTGTTTACGATGGCTCCTGGTCAGAGTGGTTCCGCAGGGCACCCCCAGAGACCCGTGTGTCCCAGGGGAAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS CCA 72 bp | GGCGGCCAGACCGAATGGATTCCGCCAGCCACTTGGTaGATACCAGCGCCCGGTAGAGCACCTGATGTACCA | + |
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Preference number: 6 (lower is better) Translates to: GGQTEWIPPATW*IPAPGRAPDVP Trigger: TGGTACATCAGGTGCTCTACCGGGCGCTGGTATCCACCAAGTGGCTGGCGGAATCCATTCGGTCTGGCCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS CCA 72 bp | CCAGGCGGCCAGACCGAATGGATTCCGCCAGCCACTTaGTGGATACCAGCGCCCGGTAGAGCACCTGATGTA | + |
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Preference number: 6 (lower is better) Translates to: PGGQTEWIPPAT*WIPAPGRAPDV Trigger: TACATCAGGTGCTCTACCGGGCGCTGGTATCCACCAAGTGGCTGGCGGAATCCATTCGGTCTGGCCGCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS GCA 72 bp | CCGAGTCTAGTCCTACTATATCCGGCTCCGGTTGTGTaGCCAGGTACCGTCCTTGGGCCCGAGAGTCCACCA | + |
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Preference number: 6 (lower is better) Translates to: PSLVLLYPAPVV*PGTVLGPESPP Trigger: TGGTGGACTCTCGGGCCCAAGGACGGTACCTGGGCACACAACCGGAGCCGGATATAGTAGGACTAGACTCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS CAA 72 bp | GGGTGGCCCTCCTTCAGCCAGTTCCGGAAGCCACCATaGAGCACTGACACTGTGCGGTGGCCAAACACACGA | + |
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Preference number: 6 (lower is better) Translates to: GWPSFSQFRKPP*STDTVRWPNTR Trigger: TCGTGTGTTTGGCCACCGCACAGTGTCAGTGCTCAATGGTGGCTTCCGGAACTGGCTGAAGGAGGGCCACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS TCA 72 bp | GGTGGCCCTCCTTCAGCCAGTTCCGGAAGCCACCATTaGGCACTGACACTGTGCGGTGGCCAAACACACGAA | + |
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Preference number: 6 (lower is better) Translates to: GGPPSASSGSHH*ALTLCGGQTHE Trigger: TTCGTGTGTTTGGCCACCGCACAGTGTCAGTGCTCAATGGTGGCTTCCGGAACTGGCTGAAGGAGGGCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS TCA 72 bp | AGTGACCCCCTTGCGGCACGTGGCAATGAGGGGCTGTaGGAGGTCCACCTTCTTGTCCTGGAATATGGCACG | + |
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Preference number: 6 (lower is better) Translates to: SDPLAARGNEGL*EVHLLVLEYGT Trigger: CGTGCCATATTCCAGGACAAGAAGGTGGACCTCTCACAGCCCCTCATTGCCACGTGCCGCAAGGGGGTCACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS CCA 72 bp | GAGCAGGGAGAGATTCAGTGTGGCTTTGAAAACGGCTaGCTCTGGCCTCGAGGGCTCAGATGTCACCGGGTG | + |
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Preference number: 6 (lower is better) Translates to: EQGEIQCGFENG*LWPRGLRCHRV Trigger: CACCCGGTGACATCTGAGCCCTCGAGGCCAGAGCCAGCCGTTTTCAAAGCCACACTGAATCTCTCCCTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS CCA 72 bp | ATATCCGGCTCCGGTTGTGTGCCCAGGTACCGTCCTTaGGCCCGAGAGTCCACCAGCTGGAACCTTTTAGAC | + |
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Preference number: 6 (lower is better) Translates to: ISGSGCVPRYRP*ARESTSWNLLD Trigger: GTCTAAAAGGTTCCAGCTGGTGGACTCTCGGGCCCAAGGACGGTACCTGGGCACACAACCGGAGCCGGATAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS CAA 90 bp | GATGTCACCGGGTGGCCCTCCTTCAGCCAGTTCCGGAAGCCACCATaGAGCACTGACACTGTGCGGTGGCCAAACACACGAAACATCCAC | + |
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Preference number: 6 (lower is better) Translates to: DVTGWPSFSQFRKPP*STDTVRWPNTRNIH Trigger: GTGGATGTTTCGTGTGTTTGGCCACCGCACAGTGTCAGTGCTCAATGGTGGCTTCCGGAACTGGCTGAAGGAGGGCCACCCGGTGACATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS CCA 72 bp | CCAGGTTGCCCACATAGTCCCCAAAGTGGGCCTCACTaGGCAGCATCATCTCATAAGGCGAAGTCGTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: PGCPHSPQSGPH*AASSHKAKSCP Trigger: GGGACACGACTTCGCCTTATGAGATGATGCTGCCCAGTGAGGCCCACTTTGGGGACTATGTGGGCAACCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS CCA 72 bp | CCCAGGTACCGTCCTTGGGCCCGAGAGTCCACCAGCTaGAACCTTTTAGACTGGAGATTCTCTAGGACCTGC | + |
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Preference number: 6 (lower is better) Translates to: PRYRPWARESTS*NLLDWRFSRTC Trigger: GCAGGTCCTAGAGAATCTCCAGTCTAAAAGGTTCCAGCTGGTGGACTCTCGGGCCCAAGGACGGTACCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS CAA 72 bp | TATATCCGGCTCCGGTTGTGTGCCCAGGTACCGTCCTaGGGCCCGAGAGTCCACCAGCTGGAACCTTTTAGA | + |
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Preference number: 6 (lower is better) Translates to: YIRLRLCAQVPS*GPRVHQLEPFR Trigger: TCTAAAAGGTTCCAGCTGGTGGACTCTCGGGCCCAAGGACGGTACCTGGGCACACAACCGGAGCCGGATATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS TCA 72 bp | CTCCTTCAGCCAGTTCCGGAAGCCACCATTGAGCACTaGCACTGTGCGGTGGCCAAACACACGAAACATCCA | + |
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Preference number: 6 (lower is better) Translates to: LLQPVPEATIEH*HCAVAKHTKHP Trigger: TGGATGTTTCGTGTGTTTGGCCACCGCACAGTGTCAGTGCTCAATGGTGGCTTCCGGAACTGGCTGAAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS CCA 72 bp | AAGTCCATGAAGGGCATGTTGACTGAGCCACGGATGTaGCCCGAGTCTAGTCCTACTATATCCGGCTCCGGT | + |
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Preference number: 6 (lower is better) Translates to: KSMKGMLTEPRM*PESSPTISGSG Trigger: ACCGGAGCCGGATATAGTAGGACTAGACTCGGGCCACATCCGTGGCTCAGTCAACATGCCCTTCATGGACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS GCA 72 bp | CTCCATCGTATACCACCACATGTGTGTCGTTGCTTATaGCCAGGTTGCCCACATAGTCCCCAAAGTGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: LHRIPPHVCRCL*PGCPHSPQSGP Trigger: AGGCCCACTTTGGGGACTATGTGGGCAACCTGGGCATAAGCAACGACACACATGTGGTGGTATACGATGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS CCA 72 bp | CACCTTCTTGTCCTGGAATATGGCACGCAGCTCCTCTaGGCTCTTCTCGAAGCCATCTTTCGTCAGGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: HLLVLEYGTQLL*ALLEAIFRQEV Trigger: GACTTCCTGACGAAAGATGGCTTCGAGAAGAGCCCAGAGGAGCTGCGTGCCATATTCCAGGACAAGAAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS CAA 72 bp | AAGCCATCTTTCGTCAGGAAGTCCATGAAGGGCATGTaGACTGAGCCACGGATGTGGCCCGAGTCTAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: KPSFVRKSMKGM*TEPRMWPESSP Trigger: AGGACTAGACTCGGGCCACATCCGTGGCTCAGTCAACATGCCCTTCATGGACTTCCTGACGAAAGATGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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| CDS CAA 90 bp | CTCTTCTCGAAGCCATCTTTCGTCAGGAAGTCCATGAAGGGCATGTaGACTGAGCCACGGATGTGGCCCGAGTCTAGTCCTACTATATCC | + |
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Preference number: 6 (lower is better) Translates to: LFSKPSFVRKSMKGM*TEPRMWPESSPTIS Trigger: GGATATAGTAGGACTAGACTCGGGCCACATCCGTGGCTCAGTCAACATGCCCTTCATGGACTTCCTGACGAAAGATGGCTTCGAGAAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058659.9 |
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