Pregenerated sensors for TSSK4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007591Ensembl transcript IDs: ENSMUST00000007735.9, ENSMUST00000164809.9, ENSMUST00000226497.2, ENSMUST00000226591.2, ENSMUST00000227297.2, ENSMUST00000228041.2, ENSMUST00000228395.2
Found 182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGAGGGCTTGGCTGAGCTTGCCCCCACTTTGTGAGCACAGGCACTaGGCAGCTGGACCTAAGGAAGAAGCAGGATGGCCCATCGCACTA | + |
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Preference number: 1 (lower is better) Translates to: ERAWLSLPPLCEHRH*AAGPKEEAGWPIAL Trigger: TAGTGCGATGGGCCATCCTGCTTCTTCCTTAGGTCCAGCTGCTCAGTGCCTGTGCTCACAAAGTGGGGGCAAGCTCAGCCAAGCCCTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164809.9 ENSMUST00000227297.2 |
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| 3UTR CCA 90 bp | AGGAAGAAGCAGGATGGCCCATCGCACTACTCTGGTGAAAGGGGCTaGGGCCCTGGTTTTATGCTGGAGCCCTTGCACTCCTGGGAGATG | + |
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Preference number: 1 (lower is better) Translates to: RKKQDGPSHYSGERG*GPGFMLEPLHSWEM Trigger: CATCTCCCAGGAGTGCAAGGGCTCCAGCATAAAACCAGGGCCCCAGCCCCTTTCACCAGAGTAGTGCGATGGGCCATCCTGCTTCTTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227297.2 |
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| 3UTR TCA 90 bp | TGGTGTCATCAAAGGGCAGCCGTGCAACCACTAGAGTGTAGAGGATaGCGCCCATGCTCCAGGTGTCAGACAGGAAAGGGTTGTAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: WCHQRAAVQPLECRG*RPCSRCQTGKGCRA Trigger: TGCCCTACAACCCTTTCCTGTCTGACACCTGGAGCATGGGCGTCATCCTCTACACTCTAGTGGTTGCACGGCTGCCCTTTGATGACACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227297.2 |
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| 3UTR TCA 90 bp | AGATCTCCGGGCAGGCGTAAGCAAAGCTGCCACAGTAGGTCTGGCTaGGGTGGGAAAGGCTGTTCATTTGGCGGTAAGAAGGGCTACTAT | + |
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Preference number: 1 (lower is better) Translates to: RSPGRRKQSCHSRSG*GGKGCSFGGKKGYY Trigger: ATAGTAGCCCTTCTTACCGCCAAATGAACAGCCTTTCCCACCTCAGCCAGACCTACTGTGGCAGCTTTGCTTACGCCTGCCCGGAGATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227297.2 |
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| 3UTR CCA 90 bp | GTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTGGTGGGTTaGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTTGCTCA | + |
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Preference number: 1 (lower is better) Translates to: VVISKDWCRLAELVG*YMASSSLISFEGCS Trigger: TGAGCAACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
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| 3UTR CCA 90 bp | CACTCCTGGGAGATGGTCAAGTTAGCTGGGAAAGTGACCTCCTTCTaGGTTTCTCTCAGCAGCTTCTTGAGATTGGTGTCATCAAAGGGC | + |
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Preference number: 1 (lower is better) Translates to: HSWEMVKLAGKVTSF*VSLSSFLRLVSSKG Trigger: GCCCTTTGATGACACCAATCTCAAGAAGCTGCTGAGAGAAACCCAGAAGGAGGTCACTTTCCCAGCTAACTTGACCATCTCCCAGGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227297.2 |
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| 3UTR CCA 90 bp | TTTTATGCTGGAGCCCTTGCACTCCTGGGAGATGGTCAAGTTAGCTaGGAAAGTGACCTCCTTCTGGGTTTCTCTCAGCAGCTTCTTGAG | + |
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Preference number: 1 (lower is better) Translates to: FYAGALALLGDGQVS*ESDLLLGFSQQLLE Trigger: CTCAAGAAGCTGCTGAGAGAAACCCAGAAGGAGGTCACTTTCCCAGCTAACTTGACCATCTCCCAGGAGTGCAAGGGCTCCAGCATAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227297.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTGGGGCCCTGGTTTTATGCTGGAGCCCTTGCACTCCTGGGAGATGGTCAAGTGTGAGCACAGGCACTaGGCAGCTGGACCTAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: GWGPGFMLEPLHSWEMVKCEHRH*AAGPKE Trigger: TTCCTTAGGTCCAGCTGCTCAGTGCCTGTGCTCACA...CTTGACCATCTCCCAGGAGTGCAAGGGCTCCAGCATAAAACCAGGGCCCCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227297.2 |
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| 3UTR-3UTR TCA 90 bp | GTGCCGTTTAGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCCTTGCCCCCACTTTGTaGGCACAGGCACTGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: VPFSRAGGLVHGLEQPDFLAPTL*AQALSS Trigger: GCTGCTCAGTGCCTGTGCTCACAAAGTGGGGGCAAG...GAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAAACGGCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTTGCTCAGAGAGAGGGCTTGGCTaGGCTTGCCCCCACTTTGTG | + |
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Preference number: 2 (lower is better) Translates to: LVGWYMASSSLISFEGCSERGLG*ACPHFV Trigger: CACAAAGTGGGGGCAAGCTCAGCCAAGCCCTCTCTC...TGAGCAACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCGTTTAGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCAGTAGGAGCTCTGGCATaGCAAAAGCCAACCCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: CRLAELVGWYMASSSLISVGALA*QKPTLG Trigger: CCCCAGGGTTGGCTTTTGTCATGCCAGAGCTCCTAC...TGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAAACGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164809.9 |
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| 3UTR-3UTR CCA 90 bp | GTGCCGTTTAGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCGAAGGTTGCTCAGGCTaGAACTTGAGCATCCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: VPFSRAGGLVHGLEQPDFEGCSG*NLSIQG Trigger: CCCCTGGATGCTCAAGTTCCAGCCTGAGCAACCTTC...GAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAAACGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGGGCCCTGGTTTTATGCTGGAGCCCTTGCACTCCTGGGAGATGGTCAAGTTTCTGGTGAAAGGGGCTaGGGCCCTGGTTTTATGCTG | + |
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Preference number: 2 (lower is better) Translates to: LGPWFYAGALALLGDGQVSGERG*GPGFML Trigger: CAGCATAAAACCAGGGCCCCAGCCCCTTTCACCAGA...AACTTGACCATCTCCCAGGAGTGCAAGGGCTCCAGCATAAAACCAGGGCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000227297.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTTGTGAGCACAGGCACTaGGCAGCTGGACCTAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: AELVGWYMASSSLISFEGCEHRH*AAGPKE Trigger: TTCCTTAGGTCCAGCTGCTCAGTGCCTGTGCTCACA...ACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
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| 3UTR-3UTR TCA 90 bp | TTTAGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGACTTGCCCCCACTTTGTaGGCACAGGCACTGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: FSRAGGLVHGLEQPDFIRLAPTL*AQALSS Trigger: GCTGCTCAGTGCCTGTGCTCACAAAGTGGGGGCAAG...TCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTTGCTCAGGCTGGAAGAGAGAGGGCTTGGCTaGGCTTGCCCCCACTTTGTG | + |
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Preference number: 2 (lower is better) Translates to: LVHGLEQPDFIRRLLRLEERGLG*ACPHFV Trigger: CACAAAGTGGGGGCAAGCTCAGCCAAGCCCTCTCTC...TTCCAGCCTGAGCAACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTTGCTCAGGCTGGAAGGGAGAGAGAGGGCTTaGCTGAGCTTGCCCCCACTT | + |
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Preference number: 2 (lower is better) Translates to: LVHGLEQPDFIRRLLRLEGRERA*LSLPPL Trigger: AAGTGGGGGCAAGCTCAGCCAAGCCCTCTCTCTCCC...TTCCAGCCTGAGCAACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTGGGGAGAGAGAGGGCTTaGCTGAGCTTGCCCCCACTT | + |
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Preference number: 2 (lower is better) Translates to: LSHFQVVISKDWCRLAELGRERA*LSLPPL Trigger: AAGTGGGGGCAAGCTCAGCCAAGCCCTCTCTCTCCC...CAGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
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| 3UTR CAA 90 bp | AAAGCTGCCACAGTAGGTCTGGCTGAGGTGGGAAAGGCTGTTCATTaGGCGGTAAGAAGGGCTACTATGCACAGGCTGGCTAGAAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: KAATVGLAEVGKAVH*AVRRATMHRLARRH Trigger: GTGCCTTCTAGCCAGCCTGTGCATAGTAGCCCTTCTTACCGCCAAATGAACAGCCTTTCCCACCTCAGCCAGACCTACTGTGGCAGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227297.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTTGCTCACACAGTAGGTCTGGCTaGGGTGGGAAAGGCTGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: LVGWYMASSSLISFEGCSHSRSG*GGKGCS Trigger: TGAACAGCCTTTCCCACCTCAGCCAGACCTACTGTG...TGAGCAACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227297.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGGTTTTATGCTGGAGCCCTTGCACTCCTGGGAGATGGTCAAGTTAGCTGGGAAGGAAGAAGCAGGATaGCCCATCGCACTACTCTGG | + |
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Preference number: 2 (lower is better) Translates to: PGFMLEPLHSWEMVKLAGKEEAG*PIALLW Trigger: CCAGAGTAGTGCGATGGGCCATCCTGCTTCTTCCTT...CCCAGCTAACTTGACCATCTCCCAGGAGTGCAAGGGCTCCAGCATAAAACCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227297.2 |
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| 3UTR-3UTR CCA 90 bp | TCTAGGATGGTGGCACGCTTGGTAGATTGGCGTAGCAGCTGGAGGATCAGGTTCGAGCCCTTGCACTCCTaGGAGATGGTCAAGTTAGCT | + |
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Preference number: 2 (lower is better) Translates to: SRMVARLVDWRSSWRIRFEPLHS*EMVKLA Trigger: AGCTAACTTGACCATCTCCCAGGAGTGCAAGGGCTC...GAACCTGATCCTCCAGCTGCTACGCCAATCTACCAAGCGTGCCACCATCCTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227297.2 |
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| 3UTR CAA 90 bp | GGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTGGTGGGTaGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTTGCTC | + |
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Preference number: 2 (lower is better) Translates to: GCDFQGLVPFSRAGG*VHGLEQPDFIRRLL Trigger: GAGCAACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
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| 3UTR-3UTR TCA 90 bp | TTTAGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGATGTGAGCACAGGCACTaGGCAGCTGGACCTAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: FSRAGGLVHGLEQPDFIRCEHRH*AAGPKE Trigger: TTCCTTAGGTCCAGCTGCTCAGTGCCTGTGCTCACA...TCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGCCTCCTGCCTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTTTCCTTGGCCTCCTaGCTCAGCCACTTTCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: LASCLSHFQVVISKDWCRFSLAS*LSHFQV Trigger: AACCTGAAAGTGGCTGAGGCAGGAGGCCAAGGAAAA...ACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAGGCAGGAGGCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTGTCTGGTGAAAGGGGCTaGGGCCCTGGTTTTATGCTG | + |
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Preference number: 2 (lower is better) Translates to: LSHFQVVISKDWCRLAELSGERG*GPGFML Trigger: CAGCATAAAACCAGGGCCCCAGCCCCTTTCACCAGA...CAGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164809.9 ENSMUST00000227297.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTTGCTCAGGCTGGAAAAGGAAGAAGCAGGATaGCCCATCGCACTACTCTGG | + |
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Preference number: 2 (lower is better) Translates to: LVHGLEQPDFIRRLLRLEKEEAG*PIALLW Trigger: CCAGAGTAGTGCGATGGGCCATCCTGCTTCTTCCTT...TTCCAGCCTGAGCAACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164809.9 ENSMUST00000227297.2 |
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| 3UTR CAA 90 bp | TTAGCTGGGAAAGTGACCTCCTTCTGGGTTTCTCTCAGCAGCTTCTaGAGATTGGTGTCATCAAAGGGCAGCCGTGCAACCACTAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: LAGKVTSFWVSLSSF*RLVSSKGSRATTRV Trigger: CACTCTAGTGGTTGCACGGCTGCCCTTTGATGACACCAATCTCAAGAAGCTGCTGAGAGAAACCCAGAAGGAGGTCACTTTCCCAGCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227297.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGCCTCCTGCCTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTATTTCATTCGAAGGTTaGTCAGGCTGGAACTTGAGC | + |
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Preference number: 2 (lower is better) Translates to: LASCLSHFQVVISKDWCRISFEG*SGWNLS Trigger: GCTCAAGTTCCAGCCTGAGCAACCTTCGAATGAAAT...ACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAGGCAGGAGGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCTTGCACTCCTGGGAGATGGTCAAGTTAGCTGGGAAAGTGACCTCCTTCTGATTTCATTCGAAGGTTaGTCAGGCTGGAACTTGAGC | + |
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Preference number: 2 (lower is better) Translates to: ALALLGDGQVSWESDLLLISFEG*SGWNLS Trigger: GCTCAAGTTCCAGCCTGAGCAACCTTCGAATGAAAT...CAGAAGGAGGTCACTTTCCCAGCTAACTTGACCATCTCCCAGGAGTGCAAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227297.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTTGCTCAGGCTGGAACTACTATGCACAGGCTaGCTAGAAGGCACCATCTTG | + |
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Preference number: 2 (lower is better) Translates to: LVHGLEQPDFIRRLLRLELLCTG*LEGTIL Trigger: CAAGATGGTGCCTTCTAGCCAGCCTGTGCATAGTAG...TTCCAGCCTGAGCAACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227297.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTAAAGAGAAGAGCTCTTaGATAATCCCTTTTGCCCTA | + |
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Preference number: 2 (lower is better) Translates to: AELVGWYMASSSLISFEGKEKSS*IIPFAL Trigger: TAGGGCAAAAGGGATTATGCAAGAGCTCTTCTCTTT...ACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164809.9 |
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| 3UTR-3UTR TCA 90 bp | CACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTGGTGGGTAGCATATTTAAGGTTTaGAGCTCAGTGGTTGACCCT | + |
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Preference number: 2 (lower is better) Translates to: HFQVVISKDWCRLAELVGSIFKV*SSVVDP Trigger: AGGGTCAACCACTGAGCTTCAAACCTTAAATATGCT...ACCCACCAGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164809.9 |
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| 3UTR CCA 72 bp | CAGGATGGCCCATCGCACTACTCTGGTGAAAGGGGCTaGGGCCCTGGTTTTATGCTGGAGCCCTTGCACTCC | + |
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Preference number: 3 (lower is better) Translates to: QDGPSHYSGERG*GPGFMLEPLHS Trigger: GGAGTGCAAGGGCTCCAGCATAAAACCAGGGCCCCAGCCCCTTTCACCAGAGTAGTGCGATGGGCCATCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227297.2 |
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| 3UTR-3UTR CAA 90 bp | GTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTTGCTCAGGCAGGGCTTGGCTGAGCTaGCCCCCACTTTGTGAGCAC | + |
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Preference number: 3 (lower is better) Translates to: VGWYMASSSLISFEGCSGRAWLS*PPLCEH Trigger: GTGCTCACAAAGTGGGGGCAAGCTCAGCCAAGCCCT...GCCTGAGCAACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
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| 3UTR-3UTR CAA 90 bp | TTGGCCTCCTGCCTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTAGCAGAGCTGGTGGGTaGGTACATGGCCTCGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: LASCLSHFQVVISKDWCRSRAGG*VHGLEQ Trigger: CTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCT...ACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAGGCAGGAGGCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
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| 3UTR-3UTR CAA 90 bp | GCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTAGCAGAGCTGGTGGGTaGGTACATGGCCTCGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: AELVGWYMASSSLISFEGSRAGG*VHGLEQ Trigger: CTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCT...ACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
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| 3UTR-3UTR CAA 90 bp | AGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGAGGATGGTGGCACGCTaGGTAGATTGGCGTAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: SRAGGLVHGLEQPDFIRRRMVAR*VDWRSS Trigger: GCTGCTACGCCAATCTACCAAGCGTGCCACCATCCT...CCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
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| 3UTR TCA 72 bp | CAAAGGGCAGCCGTGCAACCACTAGAGTGTAGAGGATaGCGCCCATGCTCCAGGTGTCAGACAGGAAAGGGT | + |
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Preference number: 3 (lower is better) Translates to: QRAAVQPLECRG*RPCSRCQTGKG Trigger: ACCCTTTCCTGTCTGACACCTGGAGCATGGGCGTCATCCTCTACACTCTAGTGGTTGCACGGCTGCCCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227297.2 |
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| 3UTR CCA 72 bp | TGGGGCCCTGGTTTTATGCTGGAGCCCTTGCACTCCTaGGAGATGGTCAAGTTAGCTGGGAAAGTGACCTCC | + |
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Preference number: 3 (lower is better) Translates to: WGPGFMLEPLHS*EMVKLAGKVTS Trigger: GGAGGTCACTTTCCCAGCTAACTTGACCATCTCCCAGGAGTGCAAGGGCTCCAGCATAAAACCAGGGCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227297.2 |
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| 3UTR-3UTR CAA 90 bp | CCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTGGTGGGAGGATGGTGGCACGCTaGGTAGATTGGCGTAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: PLSGCDFQGLVPFSRAGGRMVAR*VDWRSS Trigger: GCTGCTACGCCAATCTACCAAGCGTGCCACCATCCT...CCCACCAGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
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| 3UTR-3UTR CAA 90 bp | GCCTCCTGCCTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAAGGATGGTGGCACGCTaGGTAGATTGGCGTAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: ASCLSHFQVVISKDWCRLRMVAR*VDWRSS Trigger: GCTGCTACGCCAATCTACCAAGCGTGCCACCATCCT...TAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAGGCAGGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
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| 3UTR-3UTR CAA 90 bp | TTTAGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGATGCTCAGGCTGGAACTaGAGCATCCAGGGGTCCCTG | + |
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Preference number: 3 (lower is better) Translates to: FSRAGGLVHGLEQPDFIRCSGWN*SIQGSL Trigger: CAGGGACCCCTGGATGCTCAAGTTCCAGCCTGAGCA...TCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
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| 3UTR TCA 72 bp | GGCAGGCGTAAGCAAAGCTGCCACAGTAGGTCTGGCTaGGGTGGGAAAGGCTGTTCATTTGGCGGTAAGAAG | + |
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Preference number: 3 (lower is better) Translates to: GRRKQSCHSRSG*GGKGCSFGGKK Trigger: CTTCTTACCGCCAAATGAACAGCCTTTCCCACCTCAGCCAGACCTACTGTGGCAGCTTTGCTTACGCCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227297.2 |
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| 3UTR CCA 72 bp | GGAGCCCTTGCACTCCTGGGAGATGGTCAAGTTAGCTaGGAAAGTGACCTCCTTCTGGGTTTCTCTCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GALALLGDGQVS*ESDLLLGFSQQ Trigger: CTGCTGAGAGAAACCCAGAAGGAGGTCACTTTCCCAGCTAACTTGACCATCTCCCAGGAGTGCAAGGGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227297.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTAGGATGGTGGCACGCTTGGTAGATTGGCGTAGCAGCTGGAGGATCAGGTTCCTAGAAGGCACCATCTaGGCGAAGCCAAAGTCCGAT | + |
|
Preference number: 3 (lower is better) Translates to: SRMVARLVDWRSSWRIRFLEGTI*AKPKSD Trigger: ATCGGACTTTGGCTTCGCCAAGATGGTGCCTTCTAG...GAACCTGATCCTCCAGCTGCTACGCCAATCTACCAAGCGTGCCACCATCCTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227297.2 |
||
| 3UTR GCA 72 bp | CTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTaGCGTTTAGCAGAGCTGGTGGGTTGGTACATGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LSHFQVVISKDW*RLAELVGWYMA Trigger: GGCCATGTACCAACCCACCAGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
||
| 3UTR CCA 72 bp | TCCAAGGACTGGTGCCGTTTAGCAGAGCTGGTGGGTTaGTACATGGCCTCGAGCAGCCTGATTTCATTCGAA | + |
|
Preference number: 3 (lower is better) Translates to: SKDWCRLAELVG*YMASSSLISFE Trigger: TTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAAACGGCACCAGTCCTTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGCCCTTGCACTCCTGGGAGATGGTCAAGTTAGCTGGGAAAGTGACCTCCTTCGGAAAGGCTGTTCATTaGGCGGTAAGAAGGGCTACT | + |
|
Preference number: 3 (lower is better) Translates to: EPLHSWEMVKLAGKVTSFGKAVH*AVRRAT Trigger: AGTAGCCCTTCTTACCGCCAAATGAACAGCCTTTCC...GAAGGAGGTCACTTTCCCAGCTAACTTGACCATCTCCCAGGAGTGCAAGGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227297.2 |
||
| 3UTR CCA 72 bp | TGCCTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTaGTGCCGTTTAGCAGAGCTGGTGGGTTGGTACATG | + |
|
Preference number: 3 (lower is better) Translates to: CLSHFQVVISKD*CRLAELVGWYM Trigger: CATGTACCAACCCACCAGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
||
| 3UTR-3UTR CAA 90 bp | CCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTGGTGGGTTGGAAGGCCTAAATTaGGTATTTCCTTTCCCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: PLSGCDFQGLVPFSRAGGLEGLN*VFPFPS Trigger: AGAGGGGAAAGGAAATACCAAATTTAGGCCTTCCAA...CCCACCAGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164809.9 |
||
| 3UTR CCA 72 bp | CCTAATTACCAAGCATATTTAAGGTTTGAAGCTCAGTaGTTGACCCTCTTAAAGCCTTGCCACCACTTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: PNYQAYLRFEAQ*LTLLKPCHHFE Trigger: CTCAAAGTGGTGGCAAGGCTTTAAGAGGGTCAACCACTGAGCTTCAAACCTTAAATATGCTTGGTAATTAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164809.9 |
||
| CDS-3UTR GCA 90 bp | TCCCTGAGGACATCTAGGATGGTGGCACGCTTGGTAGATTGGCGTAGCAGCTGGGGTGCACGATGCCCTTaGTGTGCAGGTAGGCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SLRTSRMVARLVDWRSSWGARCP*CAGRRC Trigger: GCATCGCCTACCTGCACAGCAAGGGCATCGTGCACC...CCAGCTGCTACGCCAATCTACCAAGCGTGCCACCATCCTAGATGTCCTCAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
||
| CDS-3UTR CCA 90 bp | GCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTCAGCAGCAGAAAGGCTaGGGGTCAGGCGGTGCACGA | + |
|
Preference number: 4 (lower is better) Translates to: AELVGWYMASSSLISFEGQQQKG*GSGGAR Trigger: TCGTGCACCGCCTGACCCCCAGCCTTTCTGCTGCTG...ACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 |
||
| CDS-3UTR CCA 90 bp | TCCTTGGCCTCCTGCCTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCAGCAGCAGAAAGGCTaGGGGTCAGGCGGTGCACGA | + |
|
Preference number: 4 (lower is better) Translates to: SLASCLSHFQVVISKDWCQQQKG*GSGGAR Trigger: TCGTGCACCGCCTGACCCCCAGCCTTTCTGCTGCTG...GCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAGGCAGGAGGCCAAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 |
||
| CDS-3UTR TCA 90 bp | GCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTGAGAGAGGGCTTGGCTaGGCTTGCCCCCACTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AELVGWYMASSSLISFEGERGLG*ACPHFV Trigger: CACAAAGTGGGGGCAAGCTCAGCCAAGCCCTCTCTC...ACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226497.2 ENSMUST00000228041.2 |
||
| CDS-3UTR GCA 90 bp | GGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTTGCTCAGGGGTGCACGATGCCCTTaGTGTGCAGGTAGGCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: GGLVHGLEQPDFIRRLLRGARCP*CAGRRC Trigger: GCATCGCCTACCTGCACAGCAAGGGCATCGTGCACC...CCTGAGCAACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGGGTGCACGATGCCCTTaGTGTGCAGGTAGGCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SRAGGLVHGLEQPDFIRRGARCP*CAGRRC Trigger: GCATCGCCTACCTGCACAGCAAGGGCATCGTGCACC...CCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
||
| CDS-3UTR CCA 90 bp | TTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTTGCTCAGGCTGGAAAGGCCTCAGCCCTCCTaGGGGAGCCAGCACCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVHGLEQPDFIRRLLRLERPQPS*GSQHLA Trigger: TGCAAGGTGCTGGCTCCCCCAGGAGGGCTGAGGCCT...TTCCAGCCTGAGCAACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164809.9 |
||
| CDS-3UTR CCA 90 bp | GCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTCAGGCACTGAGCAGCTaGACCTTGCACTCCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AELVGWYMASSSLISFEGQALSS*TLHSWE Trigger: CTCCCAGGAGTGCAAGGTCCAGCTGCTCAGTGCCTG...ACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226497.2 ENSMUST00000228041.2 |
||
| 3UTR CAA 72 bp | CAGGGGTCCCTGAGGACATCTAGGATGGTGGCACGCTaGGTAGATTGGCGTAGCAGCTGGAGGATCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QGSLRTSRMVAR*VDWRSSWRIRF Trigger: GAACCTGATCCTCCAGCTGCTACGCCAATCTACCAAGCGTGCCACCATCCTAGATGTCCTCAGGGACCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
||
| CDS-3UTR TCA 90 bp | TGCCGTTTAGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCAATAGGCTGGGGTGGCTaGTGCTGTTTCCGAGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CRLAELVGWYMASSSLISIGWGG*CCFRGV Trigger: GACACCTCGGAAACAGCATCAGCCACCCCAGCCTAT...TGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAAACGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
||
| CDS-3UTR TCA 90 bp | GTGCCGTTTAGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCAGGACATCACCGCCCTaGGCCAGCTCCAAAATGATG | + |
|
Preference number: 4 (lower is better) Translates to: VPFSRAGGLVHGLEQPDFRTSPP*ASSKMM Trigger: CATCATTTTGGAGCTGGCTCAGGGCGGTGATGTCCT...GAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAAACGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
||
| CDS-3UTR TCA 90 bp | AGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTTGCTTGCCCCCACTTTGTaGGCACAGGCACTGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RAGGLVHGLEQPDFIRRLLAPTL*AQALSS Trigger: GCTGCTCAGTGCCTGTGCTCACAAAGTGGGGGCAAG...CAACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226497.2 ENSMUST00000228041.2 |
||
| CDS-3UTR CCA 90 bp | TGCCGTTTAGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCAGCCCTGGTTTTATGCTaGAGCCCTTGCACTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CRLAELVGWYMASSSLISALVLC*SPCTPG Trigger: CCCAGGAGTGCAAGGGCTCCAGCATAAAACCAGGGC...TGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAAACGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007735.9 |
||
| CDS-3UTR TCA 90 bp | CTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTTGCTCAATAGGCTGGGGTGGCTaGTGCTGTTTCCGAGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVGWYMASSSLISFEGCSIGWGG*CCFRGV Trigger: GACACCTCGGAAACAGCATCAGCCACCCCAGCCTAT...TGAGCAACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGGGCTACTATGCACAGGCTGGCTAGAAGGCACCATCTTGGCGAAGCCAAAATAGGCTGGGGTGGCTaGTGCTGTTTCCGAGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RRATMHRLARRHHLGEAKIGWGG*CCFRGV Trigger: GACACCTCGGAAACAGCATCAGCCACCCCAGCCTAT...TTTGGCTTCGCCAAGATGGTGCCTTCTAGCCAGCCTGTGCATAGTAGCCCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227297.2 |
||
| CDS-3UTR TCA 90 bp | GCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTAGGACATCACCGCCCTaGGCCAGCTCCAAAATGATG | + |
|
Preference number: 4 (lower is better) Translates to: AELVGWYMASSSLISFEGRTSPP*ASSKMM Trigger: CATCATTTTGGAGCTGGCTCAGGGCGGTGATGTCCT...ACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
||
| CDS-3UTR TCA 90 bp | GCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTCACAGTAGGTCTGGCTaGGGTGGGAAAGGCTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AELVGWYMASSSLISFEGHSRSG*GGKGCS Trigger: TGAACAGCCTTTCCCACCTCAGCCAGACCTACTGTG...ACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000228041.2 |
||
| CDS-3UTR TCA 90 bp | TCTAGGATGGTGGCACGCTTGGTAGATTGGCGTAGCAGCTGGAGGATCAGGTTCCTAGAGTGTAGAGGATaGCGCCCATGCTCCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SRMVARLVDWRSSWRIRFLECRG*RPCSRC Trigger: ACACCTGGAGCATGGGCGTCATCCTCTACACTCTAG...GAACCTGATCCTCCAGCTGCTACGCCAATCTACCAAGCGTGCCACCATCCTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 |
||
| CDS-3UTR TCA 90 bp | CCTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTCTTGCCCCCACTTTGTaGGCACAGGCACTGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PQPLSGCDFQGLVPFSRALAPTL*AQALSS Trigger: GCTGCTCAGTGCCTGTGCTCACAAAGTGGGGGCAAG...AGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226497.2 ENSMUST00000228041.2 |
||
| CDS-3UTR TCA 90 bp | CTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTGGAGAGAGGGCTTGGCTaGGCTTGCCCCCACTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSHFQVVISKDWCRLAELERGLG*ACPHFV Trigger: CACAAAGTGGGGGCAAGCTCAGCCAAGCCCTCTCTC...CAGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226497.2 ENSMUST00000228041.2 |
||
| CDS-3UTR GCA 90 bp | TTGGCCTCCTGCCTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTGTGCAGGTAGGCGATaGCCAAAGCCATCTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LASCLSHFQVVISKDWCRCAGRR*PKPSGR Trigger: TCTCCCAGATGGCTTTGGGCATCGCCTACCTGCACA...ACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAGGCAGGAGGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
||
| CDS-3UTR GCA 90 bp | TGCCGTTTAGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATGTGCAGGTAGGCGATaGCCAAAGCCATCTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CRLAELVGWYMASSSLISCAGRR*PKPSGR Trigger: TCTCCCAGATGGCTTTGGGCATCGCCTACCTGCACA...TGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAAACGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
||
| CDS-3UTR GCA 90 bp | GGCCTCCTGCCTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTTGTGCAGGTAGGCGATaGCCAAAGCCATCTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLLPQPLSGCDFQGLVPFCAGRR*PKPSGR Trigger: TCTCCCAGATGGCTTTGGGCATCGCCTACCTGCACA...AAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAGGCAGGAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
||
| CDS-3UTR GCA 90 bp | TTAGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTGCACGATGCCCTTaGTGTGCAGGTAGGCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LAELVGWYMASSSLISFEGARCP*CAGRRC Trigger: GCATCGCCTACCTGCACAGCAAGGGCATCGTGCACC...TTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
||
| CDS-3UTR GCA 90 bp | TTTAGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAGGTGCACGATGCCCTTaGTGTGCAGGTAGGCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: FSRAGGLVHGLEQPDFIRGARCP*CAGRRC Trigger: GCATCGCCTACCTGCACAGCAAGGGCATCGTGCACC...TCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
||
| CDS-3UTR GCA 90 bp | TGCCTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGGGGGAGCCAGCACCTTaGACTCCTGGGAGATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CLSHFQVVISKDWCRLAEGEPAP*TPGRWS Trigger: TGACCATCTCCCAGGAGTGCAAGGTGCTGGCTCCCC...CTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164809.9 |
||
| CDS-3UTR CCA 90 bp | TTGGCCTCCTGCCTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTCTGGTGAAAGGGGCTaGGGCCCTGGTTTTATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LASCLSHFQVVISKDWCRSGERG*GPGFML Trigger: CAGCATAAAACCAGGGCCCCAGCCCCTTTCACCAGA...ACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAGGCAGGAGGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007735.9 |
||
| CDS-3UTR CCA 90 bp | CCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTGGTGGGGGCTGGGGGTCAGGCTaGGGAGAGGGCTTAGTATTA | + |
|
Preference number: 4 (lower is better) Translates to: PLSGCDFQGLVPFSRAGGGWGSG*GEGLVL Trigger: TAATACTAAGCCCTCTCCCCAGCCTGACCCCCAGCC...CCCACCAGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000227297.2 |
||
| CDS-3UTR CCA 90 bp | TGCCTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCAGGCACTGAGCAGCTaGACCTTGCACTCCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CLSHFQVVISKDWCRLAEQALSS*TLHSWE Trigger: CTCCCAGGAGTGCAAGGTCCAGCTGCTCAGTGCCTG...CTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226497.2 ENSMUST00000228041.2 |
||
| CDS-3UTR CCA 90 bp | TGCCTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGGGGAGAGAGAGGGCTTaGCTGAGCTTGCCCCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: CLSHFQVVISKDWCRLAEGRERA*LSLPPL Trigger: AAGTGGGGGCAAGCTCAGCCAAGCCCTCTCTCTCCC...CTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226497.2 ENSMUST00000228041.2 |
||
| CDS-3UTR CCA 90 bp | TTTAGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAGGGAGAGAGAGGGCTTaGCTGAGCTTGCCCCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: FSRAGGLVHGLEQPDFIRGRERA*LSLPPL Trigger: AAGTGGGGGCAAGCTCAGCCAAGCCCTCTCTCTCCC...TCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226497.2 ENSMUST00000228041.2 |
||
| CDS-3UTR TCA 90 bp | TTTAGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAATAGGCTGGGGTGGCTaGTGCTGTTTCCGAGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FSRAGGLVHGLEQPDFIRIGWGG*CCFRGV Trigger: GACACCTCGGAAACAGCATCAGCCACCCCAGCCTAT...TCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
||
| CDS-3UTR TCA 90 bp | TGCCTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGATAGGCTGGGGTGGCTaGTGCTGTTTCCGAGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CLSHFQVVISKDWCRLAEIGWGG*CCFRGV Trigger: GACACCTCGGAAACAGCATCAGCCACCCCAGCCTAT...CTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
||
| CDS-3UTR TCA 90 bp | GCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTAGGAGCCATGGCCAATaGTCTTGCCCACCTCATAAC | + |
|
Preference number: 4 (lower is better) Translates to: AELVGWYMASSSLISFEGRSHGQ*SCPPHN Trigger: GTTATGAGGTGGGCAAGATCATTGGCCATGGCTCCT...ACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
||
| CDS-3UTR TCA 90 bp | GTGCCGTTTAGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCGAGCCAGCTCCAAAATaGTGTATACTCGGGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VPFSRAGGLVHGLEQPDFEPAPK*CILGMW Trigger: CCACATCCCGAGTATACATCATTTTGGAGCTGGCTC...GAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAAACGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
||
| CDS-3UTR TCA 90 bp | GCCTCCTGCCTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTACACAGTAGGTCTGGCTaGGGTGGGAAAGGCTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASCLSHFQVVISKDWCRLHSRSG*GGKGCS Trigger: TGAACAGCCTTTCCCACCTCAGCCAGACCTACTGTG...TAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAGGCAGGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 |
||
| CDS-3UTR TCA 90 bp | CACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTGGTGGGTTGTGAGCACAGGCACTaGGCAGCTGGACCTTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: HFQVVISKDWCRLAELVGCEHRH*AAGPCT Trigger: AGTGCAAGGTCCAGCTGCTCAGTGCCTGTGCTCACA...ACCCACCAGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226497.2 ENSMUST00000228041.2 |
||
| CDS-3UTR TCA 90 bp | CTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTGTGTGAGCACAGGCACTaGGCAGCTGGACCTTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LSHFQVVISKDWCRLAELCEHRH*AAGPCT Trigger: AGTGCAAGGTCCAGCTGCTCAGTGCCTGTGCTCACA...CAGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226497.2 ENSMUST00000228041.2 |
||
| CDS-3UTR CCA 90 bp | GTGCCGTTTAGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCCTACTATGCACAGGCTaGCTAGAAGGCACCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VPFSRAGGLVHGLEQPDFLLCTG*LEGTIL Trigger: CAAGATGGTGCCTTCTAGCCAGCCTGTGCATAGTAG...GAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAAACGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000228041.2 |
||
| CDS-3UTR CCA 90 bp | AGGACATCTAGGATGGTGGCACGCTTGGTAGATTGGCGTAGCAGCTGGAGGATCGAGCCCTTGCACTCCTaGGAGATGGTCAAGTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RTSRMVARLVDWRSSWRIEPLHS*EMVKLA Trigger: AGCTAACTTGACCATCTCCCAGGAGTGCAAGGGCTC...GATCCTCCAGCTGCTACGCCAATCTACCAAGCGTGCCACCATCCTAGATGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007735.9 |
||
| 3UTR CAA 72 bp | ACAGTAGGTCTGGCTGAGGTGGGAAAGGCTGTTCATTaGGCGGTAAGAAGGGCTACTATGCACAGGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVGLAEVGKAVH*AVRRATMHRLA Trigger: AGCCAGCCTGTGCATAGTAGCCCTTCTTACCGCCAAATGAACAGCCTTTCCCACCTCAGCCAGACCTACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227297.2 |
||
| CDS-3UTR TCA 90 bp | GCCTCCTGCCTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAAGGAGCCATGGCCAATaGTCTTGCCCACCTCATAAC | + |
|
Preference number: 4 (lower is better) Translates to: ASCLSHFQVVISKDWCRLRSHGQ*SCPPHN Trigger: GTTATGAGGTGGGCAAGATCATTGGCCATGGCTCCT...TAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAGGCAGGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
||
| CDS-3UTR TCA 90 bp | GCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTGAGCCAGCTCCAAAATaGTGTATACTCGGGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AELVGWYMASSSLISFEGEPAPK*CILGMW Trigger: CCACATCCCGAGTATACATCATTTTGGAGCTGGCTC...ACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
||
| CDS-3UTR TCA 90 bp | CACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTGGTGGGTAGGACATCACCGCCCTaGGCCAGCTCCAAAATGATG | + |
|
Preference number: 4 (lower is better) Translates to: HFQVVISKDWCRLAELVGRTSPP*ASSKMM Trigger: CATCATTTTGGAGCTGGCTCAGGGCGGTGATGTCCT...ACCCACCAGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
||
| CDS-3UTR TCA 90 bp | CTGCCTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAAGGACATCACCGCCCTaGGCCAGCTCCAAAATGATG | + |
|
Preference number: 4 (lower is better) Translates to: LPQPLSGCDFQGLVPFSRRTSPP*ASSKMM Trigger: CATCATTTTGGAGCTGGCTCAGGGCGGTGATGTCCT...TCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
||
| CDS-3UTR TCA 90 bp | TTAGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAACACAGTAGGTCTGGCTaGGGTGGGAAAGGCTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LAELVGWYMASSSLISFEHSRSG*GGKGCS Trigger: TGAACAGCCTTTCCCACCTCAGCCAGACCTACTGTG...TTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000228041.2 |
||
| CDS-3UTR TCA 90 bp | CACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTGGTGGGTCACAGTAGGTCTGGCTaGGGTGGGAAAGGCTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HFQVVISKDWCRLAELVGHSRSG*GGKGCS Trigger: TGAACAGCCTTTCCCACCTCAGCCAGACCTACTGTG...ACCCACCAGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000228041.2 |
||
| CDS-3UTR TCA 90 bp | CTGCCTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGACTAGAGTGTAGAGGATaGCGCCCATGCTCCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPQPLSGCDFQGLVPFSRLECRG*RPCSRC Trigger: ACACCTGGAGCATGGGCGTCATCCTCTACACTCTAG...TCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000228041.2 |
||
| CDS-3UTR TCA 90 bp | CAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTGGTCTAGAGTGTAGAGGATaGCGCCCATGCTCCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QPLSGCDFQGLVPFSRAGLECRG*RPCSRC Trigger: ACACCTGGAGCATGGGCGTCATCCTCTACACTCTAG...ACCAGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000228041.2 |
||
| CDS-3UTR GCA 90 bp | TTTAGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGATGTGCAGGTAGGCGATaGCCAAAGCCATCTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSRAGGLVHGLEQPDFIRCAGRR*PKPSGR Trigger: TCTCCCAGATGGCTTTGGGCATCGCCTACCTGCACA...TCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
||
| CDS-3UTR GCA 90 bp | CAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTGGTTGTGCAGGTAGGCGATaGCCAAAGCCATCTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QPLSGCDFQGLVPFSRAGCAGRR*PKPSGR Trigger: TCTCCCAGATGGCTTTGGGCATCGCCTACCTGCACA...ACCAGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTTGATGCCCAAAGCCATCTaGGAGAACCACTTGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RAGGLVHGLEQPDFIRRLMPKAI*ENHLPA Trigger: TGCTGGCAAGTGGTTCTCCCAGATGGCTTTGGGCAT...CAACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
||
| CDS-3UTR CCA 90 bp | AGGACATCTAGGATGGTGGCACGCTTGGTAGATTGGCGTAGCAGCTGGAGGATCCTACTATGCACAGGCTaGCTAGAAGGCACCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RTSRMVARLVDWRSSWRILLCTG*LEGTIL Trigger: CAAGATGGTGCCTTCTAGCCAGCCTGTGCATAGTAG...GATCCTCCAGCTGCTACGCCAATCTACCAAGCGTGCCACCATCCTAGATGTCCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 |
||
| CDS-3UTR CCA 90 bp | GGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTTGCTCAGGCTACTATGCACAGGCTaGCTAGAAGGCACCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GGLVHGLEQPDFIRRLLRLLCTG*LEGTIL Trigger: CAAGATGGTGCCTTCTAGCCAGCCTGTGCATAGTAG...CCTGAGCAACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 |
||
| CDS-3UTR CCA 90 bp | GTGCCGTTTAGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCGATGGTCAAGTTAGCTaGGAAAGTGACCTCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VPFSRAGGLVHGLEQPDFDGQVS*ESDLLL Trigger: CAGAAGGAGGTCACTTTCCCAGCTAACTTGACCATC...GAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAAACGGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000228041.2 |
||
| CDS-3UTR CCA 90 bp | TCTAGGATGGTGGCACGCTTGGTAGATTGGCGTAGCAGCTGGAGGATCAGGTTCAGCACCTTGCACTCCTaGGAGATGGTCAAGTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRMVARLVDWRSSWRIRFSTLHS*EMVKLA Trigger: AGCTAACTTGACCATCTCCCAGGAGTGCAAGGTGCT...GAACCTGATCCTCCAGCTGCTACGCCAATCTACCAAGCGTGCCACCATCCTAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164809.9 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTGGACCTTGCACTCCTaGGAGATGGTCAAGTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRAGGLVHGLEQPDFIRRWTLHS*EMVKLA Trigger: AGCTAACTTGACCATCTCCCAGGAGTGCAAGGTCCA...CCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226497.2 ENSMUST00000228041.2 |
||
| 3UTR CAA 72 bp | GGGCTACTATGCACAGGCTGGCTAGAAGGCACCATCTaGGCGAAGCCAAAGTCCGATATCTTCACATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLLCTGWLEGTI*AKPKSDIFTFS Trigger: GGAGAATGTGAAGATATCGGACTTTGGCTTCGCCAAGATGGTGCCTTCTAGCCAGCCTGTGCATAGTAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227297.2 |
||
| CDS-3UTR TCA 90 bp | CCTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTAGGAGCCATGGCCAATaGTCTTGCCCACCTCATAAC | + |
|
Preference number: 4 (lower is better) Translates to: PQPLSGCDFQGLVPFSRARSHGQ*SCPPHN Trigger: GTTATGAGGTGGGCAAGATCATTGGCCATGGCTCCT...AGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
||
| CDS-3UTR TCA 90 bp | CTGCCTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAAGGAGCCATGGCCAATaGTCTTGCCCACCTCATAAC | + |
|
Preference number: 4 (lower is better) Translates to: LPQPLSGCDFQGLVPFSRRSHGQ*SCPPHN Trigger: GTTATGAGGTGGGCAAGATCATTGGCCATGGCTCCT...TCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
||
| CDS-3UTR TCA 90 bp | CAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTGGTAGGAGCCATGGCCAATaGTCTTGCCCACCTCATAAC | + |
|
Preference number: 4 (lower is better) Translates to: QPLSGCDFQGLVPFSRAGRSHGQ*SCPPHN Trigger: GTTATGAGGTGGGCAAGATCATTGGCCATGGCTCCT...ACCAGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
||
| CDS-3UTR TCA 90 bp | AGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTTGGAGCCAGCTCCAAAATaGTGTATACTCGGGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RAGGLVHGLEQPDFIRRLEPAPK*CILGMW Trigger: CCACATCCCGAGTATACATCATTTTGGAGCTGGCTC...CAACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
||
| CDS-3UTR TCA 90 bp | CTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTTGCTCAGAGCCAGCTCCAAAATaGTGTATACTCGGGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LVGWYMASSSLISFEGCSEPAPK*CILGMW Trigger: CCACATCCCGAGTATACATCATTTTGGAGCTGGCTC...TGAGCAACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGGGCTACTATGCACAGGCTGGCTAGAAGGCACCATCTTGGCGAAGCCAAAGAGCCAGCTCCAAAATaGTGTATACTCGGGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RRATMHRLARRHHLGEAKEPAPK*CILGMW Trigger: CCACATCCCGAGTATACATCATTTTGGAGCTGGCTC...TTTGGCTTCGCCAAGATGGTGCCTTCTAGCCAGCCTGTGCATAGTAGCCCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227297.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTGAGGACATCTAGGATGGTGGCACGCTTGGTAGATTGGCGTAGCAGCTGGTGTATACTCGGGATGTaGTCTCAATGGCCTGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLRTSRMVARLVDWRSSWCILGM*SQWPDR Trigger: TCTATCAGGCCATTGAGACCACATCCCGAGTATACA...CCAGCTGCTACGCCAATCTACCAAGCGTGCCACCATCCTAGATGTCCTCAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
||
| CDS-3UTR CCA 90 bp | CCTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTATGCCCAAAGCCATCTaGGAGAACCACTTGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PQPLSGCDFQGLVPFSRAMPKAI*ENHLPA Trigger: TGCTGGCAAGTGGTTCTCCCAGATGGCTTTGGGCAT...AGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTGATGCCCAAAGCCATCTaGGAGAACCACTTGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSHFQVVISKDWCRLAELMPKAI*ENHLPA Trigger: TGCTGGCAAGTGGTTCTCCCAGATGGCTTTGGGCAT...CAGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
||
| CDS-3UTR CCA 90 bp | TGCCTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGATGCCCAAAGCCATCTaGGAGAACCACTTGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLSHFQVVISKDWCRLAEMPKAI*ENHLPA Trigger: TGCTGGCAAGTGGTTCTCCCAGATGGCTTTGGGCAT...CTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
||
| CDS-3UTR CCA 90 bp | TTGGCCTCCTGCCTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTAAAGTGACCTCCTTCTaGGTTTCTCTCAGCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LASCLSHFQVVISKDWCRKVTSF*VSLSSF Trigger: GAAGCTGCTGAGAGAAACCCAGAAGGAGGTCACTTT...ACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAGGCAGGAGGCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 |
||
| CDS-3UTR CCA 90 bp | TGCCGTTTAGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCAAAAGTGACCTCCTTCTaGGTTTCTCTCAGCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CRLAELVGWYMASSSLISKVTSF*VSLSSF Trigger: GAAGCTGCTGAGAGAAACCCAGAAGGAGGTCACTTT...TGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAAACGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000228041.2 |
||
| CDS-3UTR CCA 90 bp | GCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTAAAGTGACCTCCTTCTaGGTTTCTCTCAGCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AELVGWYMASSSLISFEGKVTSF*VSLSSF Trigger: GAAGCTGCTGAGAGAAACCCAGAAGGAGGTCACTTT...ACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000228041.2 |
||
| CDS-3UTR CCA 90 bp | TGCCGTTTAGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCAGATGGTCAAGTTAGCTaGGAAAGTGACCTCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CRLAELVGWYMASSSLISDGQVS*ESDLLL Trigger: CAGAAGGAGGTCACTTTCCCAGCTAACTTGACCATC...TGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAAACGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000228041.2 |
||
| CDS-3UTR CCA 90 bp | TCTAGGATGGTGGCACGCTTGGTAGATTGGCGTAGCAGCTGGAGGATCAGGTTCTGTATACTCGGGATGTaGTCTCAATGGCCTGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: SRMVARLVDWRSSWRIRFCILGM*SQWPDR Trigger: TCTATCAGGCCATTGAGACCACATCCCGAGTATACA...GAACCTGATCCTCCAGCTGCTACGCCAATCTACCAAGCGTGCCACCATCCTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
||
| CDS-3UTR CCA 90 bp | TTAGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAACTACTATGCACAGGCTaGCTAGAAGGCACCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LAELVGWYMASSSLISFELLCTG*LEGTIL Trigger: CAAGATGGTGCCTTCTAGCCAGCCTGTGCATAGTAG...TTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000228041.2 |
||
| CDS-3UTR CCA 90 bp | CCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTGGTGGGGATGGTCAAGTTAGCTaGGAAAGTGACCTCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLSGCDFQGLVPFSRAGGDGQVS*ESDLLL Trigger: CAGAAGGAGGTCACTTTCCCAGCTAACTTGACCATC...CCCACCAGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000228041.2 |
||
| CDS-3UTR CCA 90 bp | CAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTGGTTGGACCTTGCACTCCTaGGAGATGGTCAAGTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QPLSGCDFQGLVPFSRAGWTLHS*EMVKLA Trigger: AGCTAACTTGACCATCTCCCAGGAGTGCAAGGTCCA...ACCAGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226497.2 ENSMUST00000228041.2 |
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| 3UTR CAA 72 bp | ACCTCCTTCTGGGTTTCTCTCAGCAGCTTCTTGAGATaGGTGTCATCAAAGGGCAGCCGTGCAACCACTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TSFWVSLSSFLR*VSSKGSRATTR Trigger: TCTAGTGGTTGCACGGCTGCCCTTTGATGACACCAATCTCAAGAAGCTGCTGAGAGAAACCCAGAAGGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227297.2 |
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| CDS-3UTR CCA 90 bp | CTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTTGCTCATGTATACTCGGGATGTaGTCTCAATGGCCTGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: LVGWYMASSSLISFEGCSCILGM*SQWPDR Trigger: TCTATCAGGCCATTGAGACCACATCCCGAGTATACA...TGAGCAACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
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| CDS-3UTR CCA 90 bp | CCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTGGTGGGTGTATACTCGGGATGTaGTCTCAATGGCCTGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLSGCDFQGLVPFSRAGGCILGM*SQWPDR Trigger: TCTATCAGGCCATTGAGACCACATCCCGAGTATACA...CCCACCAGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
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| CDS-3UTR CCA 90 bp | CCTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTAAAGTGACCTCCTTCTaGGTTTCTCTCAGCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PQPLSGCDFQGLVPFSRAKVTSF*VSLSSF Trigger: GAAGCTGCTGAGAGAAACCCAGAAGGAGGTCACTTT...AGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000228041.2 |
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| CDS-3UTR CCA 90 bp | CCTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTGATGGTCAAGTTAGCTaGGAAAGTGACCTCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PQPLSGCDFQGLVPFSRADGQVS*ESDLLL Trigger: CAGAAGGAGGTCACTTTCCCAGCTAACTTGACCATC...AGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000228041.2 |
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| CDS-3UTR GCA 90 bp | GGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTTGCTCAGGCTGCTTTGTGTAGTATaGCTCATAGACAGTTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: GGLVHGLEQPDFIRRLLRLLCVV*LIDSSI Trigger: TATGGAACTGTCTATGAGGCATACTACACAAAGCAG...CCTGAGCAACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
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| CDS-3UTR GCA 90 bp | GCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTCTGCTTTGTGTAGTATaGCTCATAGACAGTTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: AELVGWYMASSSLISFEGLLCVV*LIDSSI Trigger: TATGGAACTGTCTATGAGGCATACTACACAAAGCAG...ACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
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| CDS-3UTR CCA 90 bp | TTTAGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGATGTATACTCGGGATGTaGTCTCAATGGCCTGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSRAGGLVHGLEQPDFIRCILGM*SQWPDR Trigger: TCTATCAGGCCATTGAGACCACATCCCGAGTATACA...TCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
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| CDS-3UTR GCA 90 bp | TTTAGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGATTGATGAGGTACTTGTaGCGTAGGACTTTCATTACC | + |
|
Preference number: 4 (lower is better) Translates to: FSRAGGLVHGLEQPDFIRLMRYL*RRTFIT Trigger: GGTAATGAAAGTCCTACGGCACAAGTACCTCATCAA...TCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
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| CDS-3UTR GCA 90 bp | TGCCTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTGCTTTGTGTAGTATaGCTCATAGACAGTTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: CLSHFQVVISKDWCRLAELLCVV*LIDSSI Trigger: TATGGAACTGTCTATGAGGCATACTACACAAAGCAG...CTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
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| CDS-3UTR GCA 90 bp | TTTAGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGACTGCTTTGTGTAGTATaGCTCATAGACAGTTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: FSRAGGLVHGLEQPDFIRLLCVV*LIDSSI Trigger: TATGGAACTGTCTATGAGGCATACTACACAAAGCAG...TCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
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| CDS TCA 90 bp | AGGGCAGGGGAGAGAGAGGGCTTGGCTGAGCTTGCCCCCACTTTGTaGGCACAGGCACTGAGCAGCTGGACCTTGCACTCCTGGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: RAGEREGLAELAPTL*AQALSSWTLHSWEM Trigger: CATCTCCCAGGAGTGCAAGGTCCAGCTGCTCAGTGCCTGTGCTCACAAAGTGGGGGCAAGCTCAGCCAAGCCCTCTCTCTCCCCTGCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226497.2 ENSMUST00000228041.2 |
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| CDS-3UTR CAA 90 bp | AGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGGGGGGAGCCAGCACCTaGCACTCCTGGGAGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SRAGGLVHGLEQPDFIRRGGAST*HSWEMV Trigger: GACCATCTCCCAGGAGTGCAAGGTGCTGGCTCCCCC...CCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCT 60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000164809.9 |
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| CDS-3UTR CAA 90 bp | GTGCCGTTTAGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCCTGAGCAGCTGGACCTaGCACTCCTGGGAGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VPFSRAGGLVHGLEQPDFLSSWT*HSWEMV Trigger: GACCATCTCCCAGGAGTGCAAGGTCCAGCTGCTCAG...GAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAAACGGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226497.2 ENSMUST00000228041.2 |
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| CDS CCA 90 bp | CAGGGGTCCCTGAGGACATCTAGGATGGTGGCACGCTTGGTAGATTaGCGTAGCAGCTGGAGGATCAGGTTCTTGCACTCCTGGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: QGSLRTSRMVARLVD*RSSWRIRFLHSWEM Trigger: CATCTCCCAGGAGTGCAAGAACCTGATCCTCCAGCTGCTACGCCAATCTACCAAGCGTGCCACCATCCTAGATGTCCTCAGGGACCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226591.2 ENSMUST00000228395.2 |
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| CDS GCA 90 bp | TGCTGTGCAGGTAGGCGATGCCCAAAGCCATCTGGGAGAACCACTTaGCAGCAAGGGTCTCAGCACAGGCCCCATATCGTTGGATCCATT | + |
|
Preference number: 5 (lower is better) Translates to: CCAGRRCPKPSGRTT*QQGSQHRPHIVGSI Trigger: AATGGATCCAACGATATGGGGCCTGTGCTGAGACCCTTGCTGGCAAGTGGTTCTCCCAGATGGCTTTGGGCATCGCCTACCTGCACAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000226591.2 ENSMUST00000227297.2 ENSMUST00000228041.2 ENSMUST00000228395.2 |
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| CDS-3UTR CAA 90 bp | AGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTTGAGGGCTTGGCTGAGCTaGCCCCCACTTTGTGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RAGGLVHGLEQPDFIRRLRAWLS*PPLCEH Trigger: GTGCTCACAAAGTGGGGGCAAGCTCAGCCAAGCCCT...CAACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226497.2 ENSMUST00000228041.2 |
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| CDS CCA 90 bp | TGGGGGAGCCAGCACCTTGCACTCCTGGGAGATGGTCAAGTTAGCTaGGAAAGTGACCTCCTTCTGGGTTTCTCTCAGCAGCTTCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: WGSQHLALLGDGQVS*ESDLLLGFSQQLLE Trigger: CTCAAGAAGCTGCTGAGAGAAACCCAGAAGGAGGTCACTTTCCCAGCTAACTTGACCATCTCCCAGGAGTGCAAGGTGCTGGCTCCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164809.9 |
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| CDS-3UTR CAA 90 bp | TCTAGGATGGTGGCACGCTTGGTAGATTGGCGTAGCAGCTGGAGGATCAGGTTCATCTGGGAGAACCACTaGCCAGCAAGGGTCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SRMVARLVDWRSSWRIRFIWENH*PARVSA Trigger: TGCTGAGACCCTTGCTGGCAAGTGGTTCTCCCAGAT...GAACCTGATCCTCCAGCTGCTACGCCAATCTACCAAGCGTGCCACCATCCTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000227297.2 |
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| CDS-3UTR CAA 90 bp | CTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTGCTGAGCAGCTGGACCTaGCACTCCTGGGAGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSHFQVVISKDWCRLAELLSSWT*HSWEMV Trigger: GACCATCTCCCAGGAGTGCAAGGTCCAGCTGCTCAG...CAGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226497.2 ENSMUST00000228041.2 |
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| CDS-3UTR CAA 90 bp | CACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTGGTGGGTAGGGCTTGGCTGAGCTaGCCCCCACTTTGTGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: HFQVVISKDWCRLAELVGRAWLS*PPLCEH Trigger: GTGCTCACAAAGTGGGGGCAAGCTCAGCCAAGCCCT...ACCCACCAGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226497.2 ENSMUST00000228041.2 |
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| CDS-3UTR CAA 90 bp | TCCTTGGCCTCCTGCCTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCTAGAAGGCACCATCTaGGCGAAGCCAAAGTCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: SLASCLSHFQVVISKDWCLEGTI*AKPKSD Trigger: ATCGGACTTTGGCTTCGCCAAGATGGTGCCTTCTAG...GCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAGGCAGGAGGCCAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 |
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| CDS-3UTR CAA 90 bp | GTGCCGTTTAGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCGGAAAGGCTGTTCATTaGGCGGTAAGAAGGGCTACT | + |
|
Preference number: 5 (lower is better) Translates to: VPFSRAGGLVHGLEQPDFGKAVH*AVRRAT Trigger: AGTAGCCCTTCTTACCGCCAAATGAACAGCCTTTCC...GAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAAACGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000228041.2 |
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| CDS-3UTR CAA 90 bp | TGCCTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGAGGATGGTGGCACGCTaGGTAGATTGGCGTAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CLSHFQVVISKDWCRLAERMVAR*VDWRSS Trigger: GCTGCTACGCCAATCTACCAAGCGTGCCACCATCCT...CTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226497.2 ENSMUST00000228041.2 |
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| CDS TCA 90 bp | GCACAGGCCCCATATCGTTGGATCCATTCGAGGACATCACCGCCCTaGGCCAGCTCCAAAATGATGTATACTCGGGATGTGGTCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: AQAPYRWIHSRTSPP*ASSKMMYTRDVVSM Trigger: CATTGAGACCACATCCCGAGTATACATCATTTTGGAGCTGGCTCAGGGCGGTGATGTCCTCGAATGGATCCAACGATATGGGGCCTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000226591.2 ENSMUST00000227297.2 ENSMUST00000228041.2 ENSMUST00000228395.2 |
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| CDS CCA 90 bp | ACTGAGCAGCTGGACCTTGCACTCCTGGGAGATGGTCAAGTTAGCTaGGAAAGTGACCTCCTTCTGGGTTTCTCTCAGCAGCTTCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TEQLDLALLGDGQVS*ESDLLLGFSQQLLE Trigger: CTCAAGAAGCTGCTGAGAGAAACCCAGAAGGAGGTCACTTTCCCAGCTAACTTGACCATCTCCCAGGAGTGCAAGGTCCAGCTGCTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226497.2 ENSMUST00000228041.2 |
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| CDS-3UTR CAA 90 bp | CAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTGGTATCTGGGAGAACCACTaGCCAGCAAGGGTCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: QPLSGCDFQGLVPFSRAGIWENH*PARVSA Trigger: TGCTGAGACCCTTGCTGGCAAGTGGTTCTCCCAGAT...ACCAGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
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| CDS-3UTR CAA 90 bp | CTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTGATCTGGGAGAACCACTaGCCAGCAAGGGTCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSHFQVVISKDWCRLAELIWENH*PARVSA Trigger: TGCTGAGACCCTTGCTGGCAAGTGGTTCTCCCAGAT...CAGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000227297.2 ENSMUST00000228041.2 |
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| CDS-3UTR CAA 90 bp | GCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTGGAAAGGCTGTTCATTaGGCGGTAAGAAGGGCTACT | + |
|
Preference number: 5 (lower is better) Translates to: AELVGWYMASSSLISFEGGKAVH*AVRRAT Trigger: AGTAGCCCTTCTTACCGCCAAATGAACAGCCTTTCC...ACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000228041.2 |
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| CDS-3UTR CAA 90 bp | TCTAGGATGGTGGCACGCTTGGTAGATTGGCGTAGCAGCTGGAGGATCAGGTTCAGCAGCTTCTTGAGATaGGTGTCATCAAAGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRMVARLVDWRSSWRIRFSSFLR*VSSKGS Trigger: GCTGCCCTTTGATGACACCAATCTCAAGAAGCTGCT...GAACCTGATCCTCCAGCTGCTACGCCAATCTACCAAGCGTGCCACCATCCTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 |
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| CDS-3UTR CAA 90 bp | CTGCCTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGATTTATGCTGGAGCCCTaGCACTCCTGGGAGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LPQPLSGCDFQGLVPFSRFMLEP*HSWEMV Trigger: GACCATCTCCCAGGAGTGCAAGGGCTCCAGCATAAA...TCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007735.9 |
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| CDS CCA 90 bp | CTGGAGGATCAGGTTCTTGCACTCCTGGGAGATGGTCAAGTTAGCTaGGAAAGTGACCTCCTTCTGGGTTTCTCTCAGCAGCTTCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LEDQVLALLGDGQVS*ESDLLLGFSQQLLE Trigger: CTCAAGAAGCTGCTGAGAGAAACCCAGAAGGAGGTCACTTTCCCAGCTAACTTGACCATCTCCCAGGAGTGCAAGAACCTGATCCTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226591.2 ENSMUST00000228395.2 |
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| CDS-3UTR CAA 90 bp | ATCTTGGCGAAGCCAAAGTCCGATATCTTCACATTCTCCCGCTTGTCCAGCAACATCTGGGAGAACCACTaGCCAGCAAGGGTCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ILAKPKSDIFTFSRLSSNIWENH*PARVSA Trigger: TGCTGAGACCCTTGCTGGCAAGTGGTTCTCCCAGAT...GTTGCTGGACAAGCGGGAGAATGTGAAGATATCGGACTTTGGCTTCGCCAAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227297.2 |
||
| CDS-3UTR CAA 90 bp | CCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTGGTGGGGGAAAGGCTGTTCATTaGGCGGTAAGAAGGGCTACT | + |
|
Preference number: 5 (lower is better) Translates to: PLSGCDFQGLVPFSRAGGGKAVH*AVRRAT Trigger: AGTAGCCCTTCTTACCGCCAAATGAACAGCCTTTCC...CCCACCAGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000228041.2 |
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| CDS-3UTR CAA 90 bp | AGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTTGAGCAGCTTCTTGAGATaGGTGTCATCAAAGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RAGGLVHGLEQPDFIRRLSSFLR*VSSKGS Trigger: GCTGCCCTTTGATGACACCAATCTCAAGAAGCTGCT...CAACCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000228041.2 |
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| CDS-3UTR CAA 90 bp | CCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTGGTGGGAGCAGCTTCTTGAGATaGGTGTCATCAAAGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLSGCDFQGLVPFSRAGGSSFLR*VSSKGS Trigger: GCTGCCCTTTGATGACACCAATCTCAAGAAGCTGCT...CCCACCAGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000228041.2 |
||
| CDS-3UTR CAA 90 bp | CACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGCTGGTGGGTGGAAAGGCTGTTCATTaGGCGGTAAGAAGGGCTACT | + |
|
Preference number: 5 (lower is better) Translates to: HFQVVISKDWCRLAELVGGKAVH*AVRRAT Trigger: AGTAGCCCTTCTTACCGCCAAATGAACAGCCTTTCC...ACCCACCAGCTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000228041.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAAGGTCTCTCAGCAGCTTCTaGAGATTGGTGTCATCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SRAGGLVHGLEQPDFIRRSLSSF*RLVSSK Trigger: CTTTGATGACACCAATCTCAAGAAGCTGCTGAGAGA...CCTTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000228041.2 |
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| CDS GCA 90 bp | CGAGATGATCTTGACAGCCACCATGACCTTCTGCTTTGTGTAGTATaGCTCATAGACAGTTCCATAGGAGCCATGGCCAATGATCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RDDLDSHHDLLLCVV*LIDSSIGAMANDLA Trigger: GGCAAGATCATTGGCCATGGCTCCTATGGAACTGTCTATGAGGCATACTACACAAAGCAGAAGGTCATGGTGGCTGTCAAGATCATCTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000226591.2 ENSMUST00000227297.2 ENSMUST00000228041.2 ENSMUST00000228395.2 |
||
| CDS-3UTR CAA 90 bp | TTAGCAGAGCTGGTGGGTTGGTACATGGCCTCGAGCAGCCTGATTTCATTCGAATCTCTCAGCAGCTTCTaGAGATTGGTGTCATCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LAELVGWYMASSSLISFESLSSF*RLVSSK Trigger: CTTTGATGACACCAATCTCAAGAAGCTGCTGAGAGA...TTCGAATGAAATCAGGCTGCTCGAGGCCATGTACCAACCCACCAGCTCTGCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000228041.2 |
||
| CDS-3UTR CAA 90 bp | TGCCTCAGCCACTTTCAGGTTGTGATTTCCAAGGACTGGTGCCGTTTAGCAGAGTCTCTCAGCAGCTTCTaGAGATTGGTGTCATCAAAG | + |
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Preference number: 5 (lower is better) Translates to: CLSHFQVVISKDWCRLAESLSSF*RLVSSK Trigger: CTTTGATGACACCAATCTCAAGAAGCTGCTGAGAGA...CTCTGCTAAACGGCACCAGTCCTTGGAAATCACAACCTGAAAGTGGCTGAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000228041.2 |
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| CDS TCA 72 bp | GAGAGAGAGGGCTTGGCTGAGCTTGCCCCCACTTTGTaGGCACAGGCACTGAGCAGCTGGACCTTGCACTCC | + |
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Preference number: 6 (lower is better) Translates to: EREGLAELAPTL*AQALSSWTLHS Trigger: GGAGTGCAAGGTCCAGCTGCTCAGTGCCTGTGCTCACAAAGTGGGGGCAAGCTCAGCCAAGCCCTCTCTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226497.2 ENSMUST00000228041.2 |
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| CDS TCA 72 bp | TGGCTGAGCTTGCCCCCACTTTGTGAGCACAGGCACTaGGCAGCTGGACCTTGCACTCCTGGGAGATGGTCA | + |
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Preference number: 6 (lower is better) Translates to: WLSLPPLCEHRH*AAGPCTPGRWS Trigger: TGACCATCTCCCAGGAGTGCAAGGTCCAGCTGCTCAGTGCCTGTGCTCACAAAGTGGGGGCAAGCTCAGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226497.2 ENSMUST00000228041.2 |
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| CDS CAA 90 bp | GGAGAACCACTTGCCAGCAAGGGTCTCAGCACAGGCCCCATATCGTaGGATCCATTCGAGGACATCACCGCCCTGAGCCAGCTCCAAAAT | + |
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Preference number: 6 (lower is better) Translates to: GEPLASKGLSTGPIS*DPFEDITALSQLQN Trigger: ATTTTGGAGCTGGCTCAGGGCGGTGATGTCCTCGAATGGATCCAACGATATGGGGCCTGTGCTGAGACCCTTGCTGGCAAGTGGTTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000226591.2 ENSMUST00000227297.2 ENSMUST00000228041.2 ENSMUST00000228395.2 |
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| CDS CAA 90 bp | TTGAGCATCCAGGGGTCCCTGAGGACATCTAGGATGGTGGCACGCTaGGTAGATTGGCGTAGCAGCTGGAGGATCAGGTTCTTGCACTCC | + |
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Preference number: 6 (lower is better) Translates to: LSIQGSLRTSRMVAR*VDWRSSWRIRFLHS Trigger: GGAGTGCAAGAACCTGATCCTCCAGCTGCTACGCCAATCTACCAAGCGTGCCACCATCCTAGATGTCCTCAGGGACCCCTGGATGCTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226591.2 ENSMUST00000228395.2 |
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| CDS CCA 72 bp | AGGATGGTGGCACGCTTGGTAGATTGGCGTAGCAGCTaGAGGATCAGGTTCTTGCACTCCTGGGAGATGGTC | + |
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Preference number: 6 (lower is better) Translates to: RMVARLVDWRSS*RIRFLHSWEMV Trigger: GACCATCTCCCAGGAGTGCAAGAACCTGATCCTCCAGCTGCTACGCCAATCTACCAAGCGTGCCACCATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226591.2 ENSMUST00000228395.2 |
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| CDS CCA 72 bp | CTGAGGACATCTAGGATGGTGGCACGCTTGGTAGATTaGCGTAGCAGCTGGAGGATCAGGTTCTTGCACTCC | + |
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Preference number: 6 (lower is better) Translates to: LRTSRMVARLVD*RSSWRIRFLHS Trigger: GGAGTGCAAGAACCTGATCCTCCAGCTGCTACGCCAATCTACCAAGCGTGCCACCATCCTAGATGTCCTCAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226591.2 ENSMUST00000228395.2 |
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| CDS CCA 72 bp | CAGCACCTTGCACTCCTGGGAGATGGTCAAGTTAGCTaGGAAAGTGACCTCCTTCTGGGTTTCTCTCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: QHLALLGDGQVS*ESDLLLGFSQQ Trigger: CTGCTGAGAGAAACCCAGAAGGAGGTCACTTTCCCAGCTAACTTGACCATCTCCCAGGAGTGCAAGGTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164809.9 |
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| CDS CCA 72 bp | CTGGACCTTGCACTCCTGGGAGATGGTCAAGTTAGCTaGGAAAGTGACCTCCTTCTGGGTTTCTCTCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: LDLALLGDGQVS*ESDLLLGFSQQ Trigger: CTGCTGAGAGAAACCCAGAAGGAGGTCACTTTCCCAGCTAACTTGACCATCTCCCAGGAGTGCAAGGTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226497.2 ENSMUST00000228041.2 |
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| CDS CCA 72 bp | CAGGTTCTTGCACTCCTGGGAGATGGTCAAGTTAGCTaGGAAAGTGACCTCCTTCTGGGTTTCTCTCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: QVLALLGDGQVS*ESDLLLGFSQQ Trigger: CTGCTGAGAGAAACCCAGAAGGAGGTCACTTTCCCAGCTAACTTGACCATCTCCCAGGAGTGCAAGAACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226591.2 ENSMUST00000228395.2 |
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| CDS TCA 72 bp | ATTCGAGGACATCACCGCCCTGAGCCAGCTCCAAAATaGTGTATACTCGGGATGTGGTCTCAATGGCCTGAT | + |
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Preference number: 6 (lower is better) Translates to: IRGHHRPEPAPK*CILGMWSQWPD Trigger: ATCAGGCCATTGAGACCACATCCCGAGTATACATCATTTTGGAGCTGGCTCAGGGCGGTGATGTCCTCGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000226591.2 ENSMUST00000227297.2 ENSMUST00000228041.2 ENSMUST00000228395.2 |
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| CDS TCA 72 bp | CCATATCGTTGGATCCATTCGAGGACATCACCGCCCTaGGCCAGCTCCAAAATGATGTATACTCGGGATGTG | + |
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Preference number: 6 (lower is better) Translates to: PYRWIHSRTSPP*ASSKMMYTRDV Trigger: CACATCCCGAGTATACATCATTTTGGAGCTGGCTCAGGGCGGTGATGTCCTCGAATGGATCCAACGATATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000226591.2 ENSMUST00000227297.2 ENSMUST00000228041.2 ENSMUST00000228395.2 |
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| CDS CAA 90 bp | ACCATCTTGGCGAAGCCAAAGTCCGATATCTTCACATTCTCCCGCTaGTCCAGCAACAGGTTCTCCAACTTTAAATCCCTACCAGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: TILAKPKSDIFTFSR*SSNRFSNFKSLPAA Trigger: TGCTGCTGGTAGGGATTTAAAGTTGGAGAACCTGTTGCTGGACAAGCGGGAGAATGTGAAGATATCGGACTTTGGCTTCGCCAAGATGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000228395.2 |
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| CDS GCA 72 bp | CTTGACAGCCACCATGACCTTCTGCTTTGTGTAGTATaGCTCATAGACAGTTCCATAGGAGCCATGGCCAAT | + |
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Preference number: 6 (lower is better) Translates to: LDSHHDLLLCVV*LIDSSIGAMAN Trigger: ATTGGCCATGGCTCCTATGGAACTGTCTATGAGGCATACTACACAAAGCAGAAGGTCATGGTGGCTGTCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000007735.9 ENSMUST00000164809.9 ENSMUST00000226497.2 ENSMUST00000226591.2 ENSMUST00000227297.2 ENSMUST00000228041.2 ENSMUST00000228395.2 |
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