Pregenerated sensors for TSSK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041566Ensembl transcript IDs: ENSMUST00000046937.4
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGACGTAAGCAAGGCAGGCAGCACATGGAAGCCAGTGGTGCCAGGTaGAGGCCATGCCCATTTGGAATACCAGTAGCTGCCTTTCTTGCC | + |
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Preference number: 1 (lower is better) Translates to: RRKQGRQHMEASGAR*RPCPFGIPVAAFLA Trigger: GGCAAGAAAGGCAGCTACTGGTATTCCAAATGGGCATGGCCTGCACCTGGCACCACTGGCTTCCATGTGCTGCCTGCCTTGCTTACGTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR CCA 90 bp | GGTGAAGACTGCTTGGGACACGACGTAAGCAAGGCAGGCAGCACATaGAAGCCAGTGGTGCCAGGTGCAGGCCATGCCCATTTGGAATAC | + |
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Preference number: 1 (lower is better) Translates to: GEDCLGHDVSKAGST*KPVVPGAGHAHLEY Trigger: GTATTCCAAATGGGCATGGCCTGCACCTGGCACCACTGGCTTCCATGTGCTGCCTGCCTTGCTTACGTCGTGTCCCAAGCAGTCTTCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR GCA 90 bp | CAAGGCAGGCAGCACATGGAAGCCAGTGGTGCCAGGTGCAGGCCATaGCCATTTGGAATACCAGTAGCTGCCTTTCTTGCCCATAGGGTT | + |
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Preference number: 1 (lower is better) Translates to: QGRQHMEASGARCRP*PFGIPVAAFLAHRV Trigger: AACCCTATGGGCAAGAAAGGCAGCTACTGGTATTCCAAATGGGCATGGCCTGCACCTGGCACCACTGGCTTCCATGTGCTGCCTGCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR TCA 90 bp | GTTCTCGCAGGCACAATTCACAGAAGCAGGCTACAGAGTGTAGCTTaGTCCCAGAAGGCTGAGGAGGACAAAGCCCCTTGGCTGAGCCTG | + |
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Preference number: 1 (lower is better) Translates to: VLAGTIHRSRLQSVA*SQKAEEDKAPWLSL Trigger: CAGGCTCAGCCAAGGGGCTTTGTCCTCCTCAGCCTTCTGGGATCAAGCTACACTCTGTAGCCTGCTTCTGTGAATTGTGCCTGCGAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR CCA 90 bp | GCAATGGGTGGGACAGTACACAGTGGGGCAAAGGTGGGCTGCATGTaGTGCAGGTGCAAGAAGGTCACATCCAGGAACTCACTGAACACT | + |
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Preference number: 1 (lower is better) Translates to: AMGGTVHSGAKVGCM*CRCKKVTSRNSLNT Trigger: AGTGTTCAGTGAGTTCCTGGATGTGACCTTCTTGCACCTGCACCACATGCAGCCCACCTTTGCCCCACTGTGTACTGTCCCACCCATTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR TCA 90 bp | AATTCACAGAAGCAGGCTACAGAGTGTAGCTTGATCCCAGAAGGCTaGGGAGGACAAAGCCCCTTGGCTGAGCCTGGGGTGGGCACAATT | + |
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Preference number: 1 (lower is better) Translates to: NSQKQATECSLIPEG*GGQSPLAEPGVGTI Trigger: AATTGTGCCCACCCCAGGCTCAGCCAAGGGGCTTTGTCCTCCTCAGCCTTCTGGGATCAAGCTACACTCTGTAGCCTGCTTCTGTGAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR GCA 90 bp | ATGGGTGGGACAGTACACAGTGGGGCAAAGGTGGGCTGCATGTGGTaGAGGTGCAAGAAGGTCACATCCAGGAACTCACTGAACACTACT | + |
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Preference number: 1 (lower is better) Translates to: MGGTVHSGAKVGCMW*RCKKVTSRNSLNTT Trigger: AGTAGTGTTCAGTGAGTTCCTGGATGTGACCTTCTTGCACCTGCACCACATGCAGCCCACCTTTGCCCCACTGTGTACTGTCCCACCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR CCA 90 bp | ATGGGAAGATATAGCCTGGGTGTCGATGTGAAAACTGGGAGGCAATaGGTGGGACAGTACACAGTGGGGCAAAGGTGGGCTGCATGTGGT | + |
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Preference number: 1 (lower is better) Translates to: MGRYSLGVDVKTGRQ*VGQYTVGQRWAACG Trigger: ACCACATGCAGCCCACCTTTGCCCCACTGTGTACTGTCCCACCCATTGCCTCCCAGTTTTCACATCGACACCCAGGCTATATCTTCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR GCA 90 bp | GGAATACCAGTAGCTGCCTTTCTTGCCCATAGGGTTAAGACATGCTaGCAGTTTTGCTTTGCAGAGGTCAGCTTCCAGCTCTGCTGTGGC | + |
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Preference number: 1 (lower is better) Translates to: GIPVAAFLAHRVKTC*QFCFAEVSFQLCCG Trigger: GCCACAGCAGAGCTGGAAGCTGACCTCTGCAAAGCAAAACTGGCAGCATGTCTTAACCCTATGGGCAAGAAAGGCAGCTACTGGTATTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR GCA 90 bp | GGGACAGTACACAGTGGGGCAAAGGTGGGCTGCATGTGGTGCAGGTaGAAGAAGGTCACATCCAGGAACTCACTGAACACTACTTTTCTA | + |
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Preference number: 1 (lower is better) Translates to: GTVHSGAKVGCMWCR*KKVTSRNSLNTTFL Trigger: TAGAAAAGTAGTGTTCAGTGAGTTCCTGGATGTGACCTTCTTGCACCTGCACCACATGCAGCCCACCTTTGCCCCACTGTGTACTGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR GCA 90 bp | CCCTCTAGAAGTTATCTTCTTCATTTAGCTCTCTTCTATGGCTTCTaGCCCTCCAAATGCCCCCAACCAGCCTCTCAACTGTGTAGCTGC | + |
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Preference number: 1 (lower is better) Translates to: PSRSYLLHLALFYGF*PSKCPQPASQLCSC Trigger: GCAGCTACACAGTTGAGAGGCTGGTTGGGGGCATTTGGAGGGGCAGAAGCCATAGAAGAGAGCTAAATGAAGAAGATAACTTCTAGAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR GCA 90 bp | TTTGGAATACCAGTAGCTGCCTTTCTTGCCCATAGGGTTAAGACATaGTGCCAGTTTTGCTTTGCAGAGGTCAGCTTCCAGCTCTGCTGT | + |
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Preference number: 1 (lower is better) Translates to: FGIPVAAFLAHRVKT*CQFCFAEVSFQLCC Trigger: ACAGCAGAGCTGGAAGCTGACCTCTGCAAAGCAAAACTGGCAGCATGTCTTAACCCTATGGGCAAGAAAGGCAGCTACTGGTATTCCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR GCA 90 bp | GACACTTCTCCAGTCTCACTTGAGTGTTGCTCATGGTCTGTACTATaGCTGAACCCTGGATACTTGGTTCTCGCAGGCACAATTCACAGA | + |
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Preference number: 1 (lower is better) Translates to: DTSPVSLECCSWSVL*LNPGYLVLAGTIHR Trigger: TCTGTGAATTGTGCCTGCGAGAACCAAGTATCCAGGGTTCAGGCATAGTACAGACCATGAGCAACACTCAAGTGAGACTGGAGAAGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR TCA 90 bp | TGTGTATTAAACCCTTTATCTTCTGTAAGGTTGCCCAGAGTGAGGTaGAGAAAGGGGCCACAATGGCAAGGTGAAGACTGCTTGGGACAC | + |
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Preference number: 1 (lower is better) Translates to: CVLNPLSSVRLPRVR*RKGPQWQGEDCLGH Trigger: GTGTCCCAAGCAGTCTTCACCTTGCCATTGTGGCCCCTTTCTTCACCTCACTCTGGGCAACCTTACAGAAGATAAAGGGTTTAATACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR GCA 90 bp | GCCCAGGACTACAAGGATCTGGGCAAAGACATTCACCTTAGGGTGTaGACCAATATAGTGATTTATTGCTTCTTTAGCCGTGTGAGTTAC | + |
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Preference number: 1 (lower is better) Translates to: AQDYKDLGKDIHLRV*TNIVIYCFFSRVSY Trigger: GTAACTCACACGGCTAAAGAAGCAATAAATCACTATATTGGTGCACACCCTAAGGTGAATGTCTTTGCCCAGATCCTTGTAGTCCTGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR GCA 90 bp | TCCACATGTTGGACTGTCTTGTGTTTTGTGCATGGATGTATGTGTTaGAAGGTAGCATCCTGTGTACACCCTCTTGGCTCCTTTAGAAGT | + |
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Preference number: 1 (lower is better) Translates to: STCWTVLCFVHGCMC*KVASCVHPLGSFRS Trigger: ACTTCTAAAGGAGCCAAGAGGGTGTACACAGGATGCTACCTTGCAACACATACATCCATGCACAAAACACAAGACAGTCCAACATGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR CCA 90 bp | AGTGACATAGTCAGATGCAGAGTGGACAAGAGGGAAAAGATGATATaGGGAACAAGAATATACCATAGAGGCCACCTTGAAGTCCTAGTC | + |
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Preference number: 1 (lower is better) Translates to: SDIVRCRVDKREKMI*GTRIYHRGHLEVLV Trigger: GACTAGGACTTCAAGGTGGCCTCTATGGTATATTCTTGTTCCCCATATCATCTTTTCCCTCTTGTCCACTCTGCATCTGACTATGTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR GCA 90 bp | GGGAGGTGTAACAGAAGACATCAAACAGGAAGTGACATAGTCAGATaGAGAGTGGACAAGAGGGAAAAGATGATATGGGGAACAAGAATA | + |
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Preference number: 1 (lower is better) Translates to: GRCNRRHQTGSDIVR*RVDKREKMIWGTRI Trigger: TATTCTTGTTCCCCATATCATCTTTTCCCTCTTGTCCACTCTGCATCTGACTATGTCACTTCCTGTTTGATGTCTTCTGTTACACCTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR-3UTR CCA 90 bp | AGTGAGGAGGGGACTGTGTTAGGCTTGGTGCAGGATAGCCCAGGGATCGATAGCTGCCTCATTCCCTGCTaGCCCCCTGGGCTGCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: SEEGTVLGLVQDSPGIDSCLIPC*PPGLQE Trigger: CTCTTGCAGCCCAGGGGGCCAGCAGGGAATGAGGCA...GCTATCGATCCCTGGGCTATCCTGCACCAAGCCTAACACAGTCCCCTCCTCACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR-3UTR GCA 90 bp | CATGTGGAACCTCAGGGCCTCGAGCCAGAGCAAGCATCTGAGGGTCAAGGGGAGGTCAGCTTCCAGCTCTaGTGTGGCATCTCCTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: HVEPQGLEPEQASEGQGEVSFQL*CGISSG Trigger: TCCAGAGGAGATGCCACAGCAGAGCTGGAAGCTGAC...CTCCCCTTGACCCTCAGATGCTTGCTCTGGCTCGAGGCCCTGAGGTTCCACATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR-3UTR TCA 90 bp | CATGTGGAACCTCAGGGCCTCGAGCCAGAGCAAGCATCTGAGGGTCAAGGGGAGTCCTCTGGAACTGATTaGGATTGGAGGGGAATGAGA | + |
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Preference number: 2 (lower is better) Translates to: HVEPQGLEPEQASEGQGESSGTD*DWRGMR Trigger: TCTCATTCCCCTCCAATCTCAATCAGTTCCAGAGGA...CTCCCCTTGACCCTCAGATGCTTGCTCTGGCTCGAGGCCCTGAGGTTCCACATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR-3UTR GCA 90 bp | GACAGTACACAGTGGGGCAAAGGTGGGCTGCATGTGGTGCAGGTGCAAGAAGGTTCTCTCCACCCTCTTTaGAGTTCTCAGCCTCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: DSTQWGKGGLHVVQVQEGSLHPL*SSQPPS Trigger: AGAGGGAGGCTGAGAACTGCAAAGAGGGTGGAGAGA...ACCTTCTTGCACCTGCACCACATGCAGCCCACCTTTGCCCCACTGTGTACTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR-3UTR GCA 90 bp | ATGGGTGGGACAGTACACAGTGGGGCAAAGGTGGGCTGCATGTGGTGCAGGTGCCAGTTGAGAACTGAGTaGCAACTGGAAAGGGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: MGGTVHSGAKVGCMWCRCQLRTE*QLEREN Trigger: GTTCTCCCTTTCCAGTTGGCACTCAGTTCTCAACTG...GCACCTGCACCACATGCAGCCCACCTTTGCCCCACTGTGTACTGTCCCACCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR-3UTR CCA 90 bp | AACCTCAGGGCCTCGAGCCAGAGCAAGCATCTGAGGGTCAAGGGGAGAGGGGAGTTTAGCTCTCTTCTATaGCTTCTGCCCCTCCAAATG | + |
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Preference number: 2 (lower is better) Translates to: NLRASSQSKHLRVKGRGEFSSLL*LLPLQM Trigger: CATTTGGAGGGGCAGAAGCCATAGAAGAGAGCTAAA...CTCCCCTCTCCCCTTGACCCTCAGATGCTTGCTCTGGCTCGAGGCCCTGAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR-3UTR CCA 90 bp | ATCTTCTGTAAGGTTGCCCAGAGTGAGGTGAAGAAAGGGGCCACAATGGCAAGGGCACATGGAAGCCAGTaGTGCCAGGTGCAGGCCATG | + |
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Preference number: 2 (lower is better) Translates to: IFCKVAQSEVKKGATMARAHGSQ*CQVQAM Trigger: CATGGCCTGCACCTGGCACCACTGGCTTCCATGTGC...CCTTGCCATTGTGGCCCCTTTCTTCACCTCACTCTGGGCAACCTTACAGAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR-3UTR TCA 90 bp | ATGAAGTGCTGTGGCAGCGCTCACTGTCCACATGTTGGACTGTCTTGTGTTTTGACAAAGCCCCTTGGCTaGGCCTGGGGTGGGCACAAT | + |
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Preference number: 2 (lower is better) Translates to: MKCCGSAHCPHVGLSCVLTKPLG*AWGGHN Trigger: ATTGTGCCCACCCCAGGCTCAGCCAAGGGGCTTTGT...CAAAACACAAGACAGTCCAACATGTGGACAGTGAGCGCTGCCACAGCACTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR-3UTR TCA 90 bp | AGTGCTGTGGCAGCGCTCACTGTCCACATGTTGGACTGTCTTGTGTTTTGTGCATTGATCCCAGAAGGCTaGGGAGGACAAAGCCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: SAVAALTVHMLDCLVFCALIPEG*GGQSPL Trigger: CAAGGGGCTTTGTCCTCCTCAGCCTTCTGGGATCAA...TGCACAAAACACAAGACAGTCCAACATGTGGACAGTGAGCGCTGCCACAGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR-3UTR GCA 90 bp | CATGTGGAACCTCAGGGCCTCGAGCCAGAGCAAGCATCTGAGGGTCAAGGGGAGCATAGGGTTAAGACATaGTGCCAGTTTTGCTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: HVEPQGLEPEQASEGQGEHRVKT*CQFCFA Trigger: TGCAAAGCAAAACTGGCAGCATGTCTTAACCCTATG...CTCCCCTTGACCCTCAGATGCTTGCTCTGGCTCGAGGCCCTGAGGTTCCACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR-3UTR CCA 90 bp | TGCAAGGTAGCATCCTGTGTACACCCTCTTGGCTCCTTTAGAAGTCCTCTGCTTGGAGCCCCCTACTCCTaGGCTGGGAAATGGTGGTAT | + |
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Preference number: 2 (lower is better) Translates to: CKVASCVHPLGSFRSPLLGAPYS*AGKWWY Trigger: ATACCACCATTTCCCAGCCCAGGAGTAGGGGGCTCC...AAGCAGAGGACTTCTAAAGGAGCCAAGAGGGTGTACACAGGATGCTACCTTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR-3UTR CCA 90 bp | GTAGCATCCTGTGTACACCCTCTTGGCTCCTTTAGAAGTCCTCTGCTTATTTTCGAGGACAAAGCCCCTTaGCTGAGCCTGGGGTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: VASCVHPLGSFRSPLLIFEDKAP*LSLGWA Trigger: TGCCCACCCCAGGCTCAGCCAAGGGGCTTTGTCCTC...GAAAATAAGCAGAGGACTTCTAAAGGAGCCAAGAGGGTGTACACAGGATGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR-3UTR TCA 90 bp | TGCAAGGTAGCATCCTGTGTACACCCTCTTGGCTCCTTTAGAAGTCCTCTGCTTCTCTCTCTCGTCCCTTaGCTTCTAGGCTCAGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: CKVASCVHPLGSFRSPLLLSLVP*LLGSGF Trigger: GAAGCCTGAGCCTAGAAGTCAAGGGACGAGAGAGAG...AAGCAGAGGACTTCTAAAGGAGCCAAGAGGGTGTACACAGGATGCTACCTTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR-3UTR GCA 90 bp | GACAAGAGGGAAAAGATGATATGGGGAACAAGAATATACCATAGAGGCCACCTTCTCTGCCTCATTCCCTaGTGGCCCCCTGGGCTGCAA | + |
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Preference number: 2 (lower is better) Translates to: DKREKMIWGTRIYHRGHLLCLIP*WPPGLQ Trigger: TTGCAGCCCAGGGGGCCAGCAGGGAATGAGGCAGAG...AAGGTGGCCTCTATGGTATATTCTTGTTCCCCATATCATCTTTTCCCTCTTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR-3UTR GCA 90 bp | GTAGCATCCTGTGTACACCCTCTTGGCTCCTTTAGAAGTCCTCTGCTTATTTTCGGACAGGGCTCTCTCTaGTTCCAGCCCTTCCTCTAC | + |
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Preference number: 2 (lower is better) Translates to: VASCVHPLGSFRSPLLIFGQGSL*FQPFLY Trigger: GTAGAGGAAGGGCTGGAAGCAGAGAGAGCCCTGTCC...GAAAATAAGCAGAGGACTTCTAAAGGAGCCAAGAGGGTGTACACAGGATGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR-3UTR GCA 90 bp | CATCAAACAGGAAGTGACATAGTCAGATGCAGAGTGGACAAGAGGGAAAAGATGGCCAGTGGTGCCAGGTaGAGGCCATGCCCATTTGGA | + |
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Preference number: 2 (lower is better) Translates to: HQTGSDIVRCRVDKREKMASGAR*RPCPFG Trigger: TCCAAATGGGCATGGCCTGCACCTGGCACCACTGGC...CATCTTTTCCCTCTTGTCCACTCTGCATCTGACTATGTCACTTCCTGTTTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR-3UTR CCA 90 bp | TGCAAGGTAGCATCCTGTGTACACCCTCTTGGCTCCTTTAGAAGTCCTCTGCTTCTTGGGGCACAGGAATaGATTTCCCTACGAGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: CKVASCVHPLGSFRSPLLLGAQE*ISLRVR Trigger: CCTCACTCGTAGGGAAATCCATTCCTGTGCCCCAAG...AAGCAGAGGACTTCTAAAGGAGCCAAGAGGGTGTACACAGGATGCTACCTTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR CAA 90 bp | ACAGCAGGAGATCTTGTGTCACTTCCTGTCTCAACTGTCTCCTCCTaGAATTCCAAGCAACCTCAGGCCATCTTGGTGTCTTCTGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: TAGDLVSLPVSTVSS*NSKQPQAILVSSVS Trigger: GGAGACAGAAGACACCAAGATGGCCTGAGGTTGCTTGGAATTCAAGGAGGAGACAGTTGAGACAGGAAGTGACACAAGATCTCCTGCTGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR-3UTR TCA 90 bp | GGAAGAGGCATAGGTGGACCCATGGTTGAGATGAATCTAAATGTTTTTGGTTTTCACCTGCCTAGACCCTaGGCCCTGATGGAGGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: GRGIGGPMVEMNLNVFGFHLPRP*ALMEEA Trigger: GGCTTCCTCCATCAGGGCTCAGGGTCTAGGCAGGTG...AAAACCAAAAACATTTAGATTCATCTCAACCATGGGTCCACCTATGCCTCTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR-3UTR GCA 90 bp | CATGTGGAACCTCAGGGCCTCGAGCCAGAGCAAGCATCTGAGGGTCAAGGGGAGATTCACCTTAGGGTGTaGACCAATATAGTGATTTAT | + |
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Preference number: 2 (lower is better) Translates to: HVEPQGLEPEQASEGQGEIHLRV*TNIVIY Trigger: ATAAATCACTATATTGGTGCACACCCTAAGGTGAAT...CTCCCCTTGACCCTCAGATGCTTGCTCTGGCTCGAGGCCCTGAGGTTCCACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR-3UTR GCA 90 bp | CTTCGTGACACTTCTCCAGTCTCACTTGAGTGTTGCTCATGGTCTGTACTATGCCTCTTCTATGGCTTCTaGCCCTCCAAATGCCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: LRDTSPVSLECCSWSVLCLFYGF*PSKCPQ Trigger: TTGGGGGCATTTGGAGGGGCAGAAGCCATAGAAGAG...GCATAGTACAGACCATGAGCAACACTCAAGTGAGACTGGAGAAGTGTCACGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR-3UTR CCA 90 bp | GACAAGAGGGAAAAGATGATATGGGGAACAAGAATATACCATAGAGGCCACCTTCTGGGAGGCAATGGGTaGGACAGTACACAGTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: DKREKMIWGTRIYHRGHLLGGNG*DSTQWG Trigger: GCCCCACTGTGTACTGTCCCACCCATTGCCTCCCAG...AAGGTGGCCTCTATGGTATATTCTTGTTCCCCATATCATCTTTTCCCTCTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR-3UTR CCA 90 bp | AGTGAGGAGGGGACTGTGTTAGGCTTGGTGCAGGATAGCCCAGGGATCGATAGCCTTGTGTTTTGTGCATaGATGTATGTGTTGCAAGGT | + |
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Preference number: 2 (lower is better) Translates to: SEEGTVLGLVQDSPGIDSLVFCA*MYVLQG Trigger: ACCTTGCAACACATACATCCATGCACAAAACACAAG...GCTATCGATCCCTGGGCTATCCTGCACCAAGCCTAACACAGTCCCCTCCTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR-3UTR TCA 90 bp | GACAAGAGGGAAAAGATGATATGGGGAACAAGAATATACCATAGAGGCCACCTTGCCTGGGTGTCGATGTaGAAACTGGGAGGCAATGGG | + |
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Preference number: 2 (lower is better) Translates to: DKREKMIWGTRIYHRGHLAWVSM*KLGGNG Trigger: CCCATTGCCTCCCAGTTTTCACATCGACACCCAGGC...AAGGTGGCCTCTATGGTATATTCTTGTTCCCCATATCATCTTTTCCCTCTTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR-3UTR GCA 90 bp | CTTGGCTCCTTTAGAAGTCCTCTGCTTATTTTCACATCCCATGGGAGTCTTAGATTCTGCCCCTCCAAATaGCCCCAACCAGCCTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: LGSFRSPLLIFTSHGSLRFCPSK*PQPASQ Trigger: TTGAGAGGCTGGTTGGGGGCATTTGGAGGGGCAGAA...TCTAAGACTCCCATGGGATGTGAAAATAAGCAGAGGACTTCTAAAGGAGCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR-3UTR GCA 90 bp | GTCACATCCAGGAACTCACTGAACACTACTTTTCTAGGTTACTTGGCATTGGTGTGGACTGTCCTCCCCTaGCTTCTCTCCACCCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: VTSRNSLNTTFLGYLALVWTVLP*LLSTLF Trigger: AAAGAGGGTGGAGAGAAGGCAGGGGAGGACAGTCCA...CACCAATGCCAAGTAACCTAGAAAAGTAGTGTTCAGTGAGTTCCTGGATGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR-3UTR GCA 90 bp | CTTCGTGACACTTCTCCAGTCTCACTTGAGTGTTGCTCATGGTCTGTACTATGCCTGCCAGTTTTGCTTTaGAGAGGTCAGCTTCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: LRDTSPVSLECCSWSVLCLPVLL*RGQLPA Trigger: AGCTGGAAGCTGACCTCTGCAAAGCAAAACTGGCAG...GCATAGTACAGACCATGAGCAACACTCAAGTGAGACTGGAGAAGTGTCACGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR-3UTR GCA 90 bp | CTTGGCTCCTTTAGAAGTCCTCTGCTTATTTTCACATCCCATGGGAGTCTTAGAGTGGGCTGCATGTGGTaGAGGTGCAAGAAGGTCACA | + |
|
Preference number: 2 (lower is better) Translates to: LGSFRSPLLIFTSHGSLRVGCMW*RCKKVT Trigger: TGTGACCTTCTTGCACCTGCACCACATGCAGCCCAC...TCTAAGACTCCCATGGGATGTGAAAATAAGCAGAGGACTTCTAAAGGAGCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR-3UTR CCA 90 bp | GTCACATCCAGGAACTCACTGAACACTACTTTTCTAGGTTACTTGGCATTGGTGCCCCTACTCCTGGGCTaGGAAATGGTGGTATGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: VTSRNSLNTTFLGYLALVPLLLG*EMVVCS Trigger: GCTACATACCACCATTTCCCAGCCCAGGAGTAGGGG...CACCAATGCCAAGTAACCTAGAAAAGTAGTGTTCAGTGAGTTCCTGGATGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR-3UTR CCA 90 bp | GACAAGAGGGAAAAGATGATATGGGGAACAAGAATATACCATAGAGGCCACCTTACAGTGGGGCAAAGGTaGGCTGCATGTGGTGCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: DKREKMIWGTRIYHRGHLTVGQR*AACGAG Trigger: ACCTGCACCACATGCAGCCCACCTTTGCCCCACTGT...AAGGTGGCCTCTATGGTATATTCTTGTTCCCCATATCATCTTTTCCCTCTTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR-3UTR CCA 90 bp | CATCAAACAGGAAGTGACATAGTCAGATGCAGAGTGGACAAGAGGGAAAAGATGTGGGACAGTACACAGTaGGGCAAAGGTGGGCTGCAT | + |
|
Preference number: 2 (lower is better) Translates to: HQTGSDIVRCRVDKREKMWDSTQ*GKGGLH Trigger: ATGCAGCCCACCTTTGCCCCACTGTGTACTGTCCCA...CATCTTTTCCCTCTTGTCCACTCTGCATCTGACTATGTCACTTCCTGTTTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR CAA 90 bp | ACATCCAGGAACTCACTGAACACTACTTTTCTAGGTTACTTGGCATaGGTGTCTTCCCAAGGAAGAGGCATAGGTGGACCCATGGTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: TSRNSLNTTFLGYLA*VSSQGRGIGGPMVE Trigger: CTCAACCATGGGTCCACCTATGCCTCTTCCTTGGGAAGACACCAATGCCAAGTAACCTAGAAAAGTAGTGTTCAGTGAGTTCCTGGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR-3UTR TCA 90 bp | GACAAGAGGGAAAAGATGATATGGGGAACAAGAATATACCATAGAGGCCACCTTTCAGGCTTCAAGCCATaGGCTCTGCCTCATTCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: DKREKMIWGTRIYHRGHLSGFKP*ALPHSL Trigger: CAGGGAATGAGGCAGAGCTCATGGCTTGAAGCCTGA...AAGGTGGCCTCTATGGTATATTCTTGTTCCCCATATCATCTTTTCCCTCTTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR-3UTR GCA 90 bp | GGAAGAGGCATAGGTGGACCCATGGTTGAGATGAATCTAAATGTTTTTGGTTTTTCAAGCCATGAGCTCTaGCTCATTCCCTGCTGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: GRGIGGPMVEMNLNVFGFSSHEL*LIPCWP Trigger: GGGCCAGCAGGGAATGAGGCAGAGCTCATGGCTTGA...AAAACCAAAAACATTTAGATTCATCTCAACCATGGGTCCACCTATGCCTCTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR-3UTR TCA 90 bp | GTAGCATCCTGTGTACACCCTCTTGGCTCCTTTAGAAGTCCTCTGCTTATTTTCCATCTCCTCTGGAACTaGTTGAGATTGGAGGGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: VASCVHPLGSFRSPLLIFHLLWN*LRLEGN Trigger: ATTCCCCTCCAATCTCAATCAGTTCCAGAGGAGATG...GAAAATAAGCAGAGGACTTCTAAAGGAGCCAAGAGGGTGTACACAGGATGCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR-3UTR TCA 90 bp | GTCCTAGTCTTAAAGCCCCTGAGTGACGCACACAGCAGGAGATCTTGTGTCACTAGGTGGACCCATGGTTaGGATGAATCTAAATGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: VLVLKPLSDAHSRRSCVTRWTHG*DESKCF Trigger: AAAACATTTAGATTCATCTCAACCATGGGTCCACCT...AGTGACACAAGATCTCCTGCTGTGTGCGTCACTCAGGGGCTTTAAGACTAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR-3UTR GCA 90 bp | CTTCGTGACACTTCTCCAGTCTCACTTGAGTGTTGCTCATGGTCTGTACTATGCAGGGTTAAGACATGCTaGCAGTTTTGCTTTGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: LRDTSPVSLECCSWSVLCRVKTC*QFCFAE Trigger: CTCTGCAAAGCAAAACTGGCAGCATGTCTTAACCCT...GCATAGTACAGACCATGAGCAACACTCAAGTGAGACTGGAGAAGTGTCACGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR-3UTR GCA 90 bp | GACAAGAGGGAAAAGATGATATGGGGAACAAGAATATACCATAGAGGCCACCTTTGCATGTGGTGCAGGTaGAAGAAGGTCACATCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: DKREKMIWGTRIYHRGHLCMWCR*KKVTSR Trigger: CCTGGATGTGACCTTCTTGCACCTGCACCACATGCA...AAGGTGGCCTCTATGGTATATTCTTGTTCCCCATATCATCTTTTCCCTCTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR-3UTR GCA 90 bp | TGCAAGGTAGCATCCTGTGTACACCCTCTTGGCTCCTTTAGAAGTCCTCTGCTTAGACTTTCAGTGAGTTaGCAGAATGTGAAGGTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: CKVASCVHPLGSFRSPLLRLSVS*QNVKVL Trigger: CAACACCTTCACATTCTGGCAACTCACTGAAAGTCT...AAGCAGAGGACTTCTAAAGGAGCCAAGAGGGTGTACACAGGATGCTACCTTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR-3UTR CCA 90 bp | CATCAAACAGGAAGTGACATAGTCAGATGCAGAGTGGACAAGAGGGAAAAGATGTGCAGCCTGAAGCCCTaGTGTAGTGATGAAACACCT | + |
|
Preference number: 2 (lower is better) Translates to: HQTGSDIVRCRVDKREKMCSLKP*CSDETP Trigger: AGGTGTTTCATCACTACACCAGGGCTTCAGGCTGCA...CATCTTTTCCCTCTTGTCCACTCTGCATCTGACTATGTCACTTCCTGTTTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR-3UTR GCA 90 bp | CTTGGCTCCTTTAGAAGTCCTCTGCTTATTTTCACATCCCATGGGAGTCTTAGAACATGCTGCCAGTTTTaGTTTGCAGAGGTCAGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: LGSFRSPLLIFTSHGSLRTCCQF*FAEVSF Trigger: GAAGCTGACCTCTGCAAAGCAAAACTGGCAGCATGT...TCTAAGACTCCCATGGGATGTGAAAATAAGCAGAGGACTTCTAAAGGAGCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR-3UTR CCA 90 bp | GACAAGAGGGAAAAGATGATATGGGGAACAAGAATATACCATAGAGGCCACCTTAAAACTGGGAGGCAATaGGTGGGACAGTACACAGTG | + |
|
Preference number: 2 (lower is better) Translates to: DKREKMIWGTRIYHRGHLKTGRQ*VGQYTV Trigger: CACTGTGTACTGTCCCACCCATTGCCTCCCAGTTTT...AAGGTGGCCTCTATGGTATATTCTTGTTCCCCATATCATCTTTTCCCTCTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR CAA 90 bp | CATGGGAGTCTTAGACTTTCAGTGAGTTGCCAGAATGTGAAGGTGTaGTGTTTAGAGAAAAAGCAAGAAGGCCAGTTTCTAGATGGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: HGSLRLSVSCQNVKV*CLEKKQEGQFLDGE Trigger: CTCCCCATCTAGAAACTGGCCTTCTTGCTTTTTCTCTAAACACAACACCTTCACATTCTGGCAACTCACTGAAAGTCTAAGACTCCCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR-3UTR GCA 90 bp | GACAAGAGGGAAAAGATGATATGGGGAACAAGAATATACCATAGAGGCCACCTTGTGAATTGGCAAGTATaGTTATGGCACATGGGGTAC | + |
|
Preference number: 2 (lower is better) Translates to: DKREKMIWGTRIYHRGHLVNWQV*LWHMGY Trigger: GTACCCCATGTGCCATAAGCATACTTGCCAATTCAC...AAGGTGGCCTCTATGGTATATTCTTGTTCCCCATATCATCTTTTCCCTCTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR CCA 72 bp | TGCTTGGGACACGACGTAAGCAAGGCAGGCAGCACATaGAAGCCAGTGGTGCCAGGTGCAGGCCATGCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: CLGHDVSKAGST*KPVVPGAGHAH Trigger: ATGGGCATGGCCTGCACCTGGCACCACTGGCTTCCATGTGCTGCCTGCCTTGCTTACGTCGTGTCCCAAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTGGGACACGACGTAAGCAAGGCAGGCAGCACATGGAAGCCAGTGGTGCCACCCTCACAGGCAGATTaGTGCAGCCTGAAGCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: CLGHDVSKAGSTWKPVVPPSQAD*CSLKPW Trigger: CCAGGGCTTCAGGCTGCACAAATCTGCCTGTGAGGG...TGGCACCACTGGCTTCCATGTGCTGCCTGCCTTGCTTACGTCGTGTCCCAAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR GCA 72 bp | CAAGGCAGGCAGCACATGGAAGCCAGTGGTGCCAGGTaGAGGCCATGCCCATTTGGAATACCAGTAGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: QGRQHMEASGAR*RPCPFGIPVAA Trigger: GGCAGCTACTGGTATTCCAAATGGGCATGGCCTGCACCTGGCACCACTGGCTTCCATGTGCTGCCTGCCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR TCA 72 bp | AAGCAGGCTACAGAGTGTAGCTTGATCCCAGAAGGCTaGGGAGGACAAAGCCCCTTGGCTGAGCCTGGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: KQATECSLIPEG*GGQSPLAEPGV Trigger: CACCCCAGGCTCAGCCAAGGGGCTTTGTCCTCCTCAGCCTTCTGGGATCAAGCTACACTCTGTAGCCTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR GCA 72 bp | ATGGGTGGGACAGTACACAGTGGGGCAAAGGTGGGCTaGATGTGGTGCAGGTGCAAGAAGGTCACATCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: MGGTVHSGAKVG*MWCRCKKVTSR Trigger: CCTGGATGTGACCTTCTTGCACCTGCACCACATGCAGCCCACCTTTGCCCCACTGTGTACTGTCCCACCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR-3UTR CAA 90 bp | AGGCAGCACATGGAAGCCAGTGGTGCCAGGTGCAGGCCATGCCCATTTGGAATACTAGGTTCATCCTTCTaGGACTGTCCTCCCCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: RQHMEASGARCRPCPFGILGSSF*DCPPLP Trigger: AGGCAGGGGAGGACAGTCCAAGAAGGATGAACCTAG...TATTCCAAATGGGCATGGCCTGCACCTGGCACCACTGGCTTCCATGTGCTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR GCA 72 bp | CAGCACATGGAAGCCAGTGGTGCCAGGTGCAGGCCATaGCCATTTGGAATACCAGTAGCTGCCTTTCTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: QHMEASGARCRP*PFGIPVAAFLA Trigger: GGCAAGAAAGGCAGCTACTGGTATTCCAAATGGGCATGGCCTGCACCTGGCACCACTGGCTTCCATGTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR CCA 72 bp | GGGACAGTACACAGTGGGGCAAAGGTGGGCTGCATGTaGTGCAGGTGCAAGAAGGTCACATCCAGGAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: GTVHSGAKVGCM*CRCKKVTSRNS Trigger: TGAGTTCCTGGATGTGACCTTCTTGCACCTGCACCACATGCAGCCCACCTTTGCCCCACTGTGTACTGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR CCA 72 bp | AGGCAATGGGTGGGACAGTACACAGTGGGGCAAAGGTaGGCTGCATGTGGTGCAGGTGCAAGAAGGTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: RQWVGQYTVGQR*AACGAGARRSH Trigger: ATGTGACCTTCTTGCACCTGCACCACATGCAGCCCACCTTTGCCCCACTGTGTACTGTCCCACCCATTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR TCA 72 bp | TTCTCCCCAGCCCCTCACAGGCAGATTTGTGCAGCCTaGAGCCCTGGTGTAGTGATGAAACACCTGCCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: FSPAPHRQICAA*SPGVVMKHLPR Trigger: TCTAGGCAGGTGTTTCATCACTACACCAGGGCTTCAGGCTGCACAAATCTGCCTGTGAGGGGCTGGGGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR TCA 72 bp | CAGAGTGAGGTGAAGAAAGGGGCCACAATGGCAAGGTaGAGACTGCTTGGGACACGACGTAAGCAAGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: QSEVKKGATMAR*RLLGTRRKQGR Trigger: CCTGCCTTGCTTACGTCGTGTCCCAAGCAGTCTTCACCTTGCCATTGTGGCCCCTTTCTTCACCTCACTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR GCA 72 bp | ACAGTACACAGTGGGGCAAAGGTGGGCTGCATGTGGTaGAGGTGCAAGAAGGTCACATCCAGGAACTCACTG | + |
|
Preference number: 3 (lower is better) Translates to: TVHSGAKVGCMW*RCKKVTSRNSL Trigger: CAGTGAGTTCCTGGATGTGACCTTCTTGCACCTGCACCACATGCAGCCCACCTTTGCCCCACTGTGTACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR CCA 72 bp | TATAGCCTGGGTGTCGATGTGAAAACTGGGAGGCAATaGGTGGGACAGTACACAGTGGGGCAAAGGTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: YSLGVDVKTGRQ*VGQYTVGQRWA Trigger: AGCCCACCTTTGCCCCACTGTGTACTGTCCCACCCATTGCCTCCCAGTTTTCACATCGACACCCAGGCTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR TCA 72 bp | GCTTATGGCACATGGGGTACAGGGATGAGGGGGCATTaGTGGGCAGAAGTCCTCTCTGAGCATGGGAAGATA | + |
|
Preference number: 3 (lower is better) Translates to: AYGTWGTGMRGH*WAEVLSEHGKI Trigger: TATCTTCCCATGCTCAGAGAGGACTTCTGCCCATCAATGCCCCCTCATCCCTGTACCCCATGTGCCATAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR TCA 72 bp | GGCACAATTCACAGAAGCAGGCTACAGAGTGTAGCTTaGTCCCAGAAGGCTGAGGAGGACAAAGCCCCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: GTIHRSRLQSVA*SQKAEEDKAPW Trigger: CCAAGGGGCTTTGTCCTCCTCAGCCTTCTGGGATCAAGCTACACTCTGTAGCCTGCTTCTGTGAATTGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR GCA 72 bp | TTCTGTATTCTCCCCAGCCCCTCACAGGCAGATTTGTaGAGCCTGAAGCCCTGGTGTAGTGATGAAACACCT | + |
|
Preference number: 3 (lower is better) Translates to: FCILPSPSQADL*SLKPWCSDETP Trigger: AGGTGTTTCATCACTACACCAGGGCTTCAGGCTGCACAAATCTGCCTGTGAGGGGCTGGGGAGAATACAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR CCA 72 bp | AGGCGGTTGCTGTTAGGAAGAGAAGCTAATTGGCTTTaGAATGCATGTGGAACCTCAGGGCCTCGAGCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: RRLLLGREANWL*NACGTSGPRAR Trigger: TCTGGCTCGAGGCCCTGAGGTTCCACATGCATTCCAAAGCCAATTAGCTTCTCTTCCTAACAGCAACCGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR-3UTR CAA 90 bp | GACAGTACACAGTGGGGCAAAGGTGGGCTGCATGTGGTGCAGGTGCAAGAAGGTCCTACGAGTGAGGATTaGCAGTCTAATAGGAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: DSTQWGKGGLHVVQVQEGPTSED*QSNRKT Trigger: TGTCTTCCTATTAGACTGCAAATCCTCACTCGTAGG...ACCTTCTTGCACCTGCACCACATGCAGCCCACCTTTGCCCCACTGTGTACTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR GCA 72 bp | TTTCTTGCCCATAGGGTTAAGACATGCTGCCAGTTTTaGTTTGCAGAGGTCAGCTTCCAGCTCTGCTGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: FLAHRVKTCCQF*FAEVSFQLCCG Trigger: GCCACAGCAGAGCTGGAAGCTGACCTCTGCAAAGCAAAACTGGCAGCATGTCTTAACCCTATGGGCAAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR GCA 72 bp | GTAGCTGCCTTTCTTGCCCATAGGGTTAAGACATGCTaGCAGTTTTGCTTTGCAGAGGTCAGCTTCCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: VAAFLAHRVKTC*QFCFAEVSFQL Trigger: GAGCTGGAAGCTGACCTCTGCAAAGCAAAACTGGCAGCATGTCTTAACCCTATGGGCAAGAAAGGCAGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR GCA 72 bp | CCAGTAGCTGCCTTTCTTGCCCATAGGGTTAAGACATaGTGCCAGTTTTGCTTTGCAGAGGTCAGCTTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PVAAFLAHRVKT*CQFCFAEVSFQ Trigger: CTGGAAGCTGACCTCTGCAAAGCAAAACTGGCAGCATGTCTTAACCCTATGGGCAAGAAAGGCAGCTACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR-3UTR CAA 90 bp | CATCAAACAGGAAGTGACATAGTCAGATGCAGAGTGGACAAGAGGGAAAAGATGAGGGATGAGGGGGCATaGATGGGCAGAAGTCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: HQTGSDIVRCRVDKREKMRDEGA*MGRSPL Trigger: GAGAGGACTTCTGCCCATCAATGCCCCCTCATCCCT...CATCTTTTCCCTCTTGTCCACTCTGCATCTGACTATGTCACTTCCTGTTTGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR TCA 72 bp | GTCTTCTGTCTCCCAAACCTAGCAAGACTACAGAGATaGAAAGGCAGGTGCCTACACACTTCTCAGCACACC | + |
|
Preference number: 3 (lower is better) Translates to: VFCLPNLARLQR*KGRCLHTSQHT Trigger: GGTGTGCTGAGAAGTGTGTAGGCACCTGCCTTTTCATCTCTGTAGTCTTGCTAGGTTTGGGAGACAGAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR CCA 72 bp | ATAGGAAGACAAGGGGAGCCCAGGACTACAAGGATCTaGGCAAAGACATTCACCTTAGGGTGTGCACCAATA | + |
|
Preference number: 3 (lower is better) Translates to: IGRQGEPRTTRI*AKTFTLGCAPI Trigger: TATTGGTGCACACCCTAAGGTGAATGTCTTTGCCCAGATCCTTGTAGTCCTGGGCTCCCCTTGTCTTCCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR CCA 72 bp | GGCCTAAGGATACAGTCTGGGCTTGGGGCACAGGAATaGATTTCCCTACGAGTGAGGATTTGCAGTCTAATA | + |
|
Preference number: 3 (lower is better) Translates to: GLRIQSGLGAQE*ISLRVRICSLI Trigger: TATTAGACTGCAAATCCTCACTCGTAGGGAAATCCATTCCTGTGCCCCAAGCCCAGACTGTATCCTTAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR-3UTR CAA 90 bp | ATGAAGTGCTGTGGCAGCGCTCACTGTCCACATGTTGGACTGTCTTGTGTTTTGCTAGGTTACTTGGCATaGGTGTCTTCCCAAGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: MKCCGSAHCPHVGLSCVLLGYLA*VSSQGR Trigger: TCTTCCTTGGGAAGACACCAATGCCAAGTAACCTAG...CAAAACACAAGACAGTCCAACATGTGGACAGTGAGCGCTGCCACAGCACTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR TCA 72 bp | TCTCACTTGAGTGTTGCTCATGGTCTGTACTATGCCTaGACCCTGGATACTTGGTTCTCGCAGGCACAATTC | + |
|
Preference number: 3 (lower is better) Translates to: SHLSVAHGLYYA*TLDTWFSQAQF Trigger: GAATTGTGCCTGCGAGAACCAAGTATCCAGGGTTCAGGCATAGTACAGACCATGAGCAACACTCAAGTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR GCA 72 bp | AGTTATCTTCTTCATTTAGCTCTCTTCTATGGCTTCTaGCCCTCCAAATGCCCCCAACCAGCCTCTCAACTG | + |
|
Preference number: 3 (lower is better) Translates to: SYLLHLALFYGF*PSKCPQPASQL Trigger: CAGTTGAGAGGCTGGTTGGGGGCATTTGGAGGGGCAGAAGCCATAGAAGAGAGCTAAATGAAGAAGATAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR GCA 72 bp | TGGACTGTCTTGTGTTTTGTGCATGGATGTATGTGTTaGAAGGTAGCATCCTGTGTACACCCTCTTGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: WTVLCFVHGCMC*KVASCVHPLGS Trigger: GGAGCCAAGAGGGTGTACACAGGATGCTACCTTGCAACACATACATCCATGCACAAAACACAAGACAGTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR-3UTR CAA 90 bp | GACAAGAGGGAAAAGATGATATGGGGAACAAGAATATACCATAGAGGCCACCTTGCTGCCAGTTTTGCTTaGCAGAGGTCAGCTTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: DKREKMIWGTRIYHRGHLAASFA*QRSASS Trigger: GCTGGAAGCTGACCTCTGCAAAGCAAAACTGGCAGC...AAGGTGGCCTCTATGGTATATTCTTGTTCCCCATATCATCTTTTCCCTCTTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR-3UTR CAA 90 bp | GACAAGAGGGAAAAGATGATATGGGGAACAAGAATATACCATAGAGGCCACCTTGGATACAGTCTGGGCTaGGGGCACAGGAATGGATTT | + |
|
Preference number: 3 (lower is better) Translates to: DKREKMIWGTRIYHRGHLGYSLG*GHRNGF Trigger: AAATCCATTCCTGTGCCCCAAGCCCAGACTGTATCC...AAGGTGGCCTCTATGGTATATTCTTGTTCCCCATATCATCTTTTCCCTCTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
||
| 3UTR-3UTR CAA 90 bp | ATCTTCTGTAAGGTTGCCCAGAGTGAGGTGAAGAAAGGGGCCACAATGGCAAGGAGAACATGTCCAATGTaGTACAGAGCTGAAAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: IFCKVAQSEVKKGATMARRTCPM*YRAEKP Trigger: TGGTTTTTCAGCTCTGTACAACATTGGACATGTTCT...CCTTGCCATTGTGGCCCCTTTCTTCACCTCACTCTGGGCAACCTTACAGAAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR TCA 72 bp | ATCTTGTGTCACTTCCTGTCTCAACTGTCTCCTCCTTaGATTCCAAGCAACCTCAGGCCATCTTGGTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: ILCHFLSQLSPP*IPSNLRPSWCL Trigger: AAGACACCAAGATGGCCTGAGGTTGCTTGGAATTCAAGGAGGAGACAGTTGAGACAGGAAGTGACACAAGAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR CCA 72 bp | TTTTTAAGGCGGTTGCTGTTAGGAAGAGAAGCTAATTaGCTTTGGAATGCATGTGGAACCTCAGGGCCTCGA | + |
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Preference number: 3 (lower is better) Translates to: FLRRLLLGREAN*LWNACGTSGPR Trigger: TCGAGGCCCTGAGGTTCCACATGCATTCCAAAGCCAATTAGCTTCTCTTCCTAACAGCAACCGCCTTAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR-3UTR CAA 90 bp | GTCACATCCAGGAACTCACTGAACACTACTTTTCTAGGTTACTTGGCATTGGTGCAATTTAGGGCACAGTaGAGAACTGAGTGCCAACTG | + |
|
Preference number: 3 (lower is better) Translates to: VTSRNSLNTTFLGYLALVQFRAQ*RTECQL Trigger: CAGTTGGCACTCAGTTCTCAACTGTGCCCTAAATTG...CACCAATGCCAAGTAACCTAGAAAAGTAGTGTTCAGTGAGTTCCTGGATGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR GCA 72 bp | TACAAGGATCTGGGCAAAGACATTCACCTTAGGGTGTaGACCAATATAGTGATTTATTGCTTCTTTAGCCGT | + |
|
Preference number: 3 (lower is better) Translates to: YKDLGKDIHLRV*TNIVIYCFFSR Trigger: ACGGCTAAAGAAGCAATAAATCACTATATTGGTGCACACCCTAAGGTGAATGTCTTTGCCCAGATCCTTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR GCA 72 bp | TTCACATCCCATGGGAGTCTTAGACTTTCAGTGAGTTaGCAGAATGTGAAGGTGTTGTGTTTAGAGAAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: FTSHGSLRLSVS*QNVKVLCLEKK Trigger: CTTTTTCTCTAAACACAACACCTTCACATTCTGGCAACTCACTGAAAGTCTAAGACTCCCATGGGATGTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR TCA 72 bp | GTCTTCCCAAGGAAGAGGCATAGGTGGACCCATGGTTaGGATGAATCTAAATGTTTTTGGTTTTGTGTATTA | + |
|
Preference number: 3 (lower is better) Translates to: VFPRKRHRWTHG*DESKCFWFCVL Trigger: TAATACACAAAACCAAAAACATTTAGATTCATCTCAACCATGGGTCCACCTATGCCTCTTCCTTGGGAAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR GCA 72 bp | ATTCACCTTAGGGTGTGCACCAATATAGTGATTTATTaGTTCTTTAGCCGTGTGAGTTACCAAGTTCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: IHLRVCTNIVIY*FFSRVSYQVQR Trigger: CCTTTGAACTTGGTAACTCACACGGCTAAAGAAGCAATAAATCACTATATTGGTGCACACCCTAAGGTGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| CDS-3UTR TCA 90 bp | ATGGGTGGGACAGTACACAGTGGGGCAAAGGTGGGCTGCATGTGGTGCAGGTGCAGGTTCAGGGATCCATaGGGGCTCAGTGGCCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: MGGTVHSGAKVGCMWCRCRFRDP*GLSGPG Trigger: TCCCGGGCCACTGAGCCCTCATGGATCCCTGAACCT...GCACCTGCACCACATGCAGCCCACCTTTGCCCCACTGTGTACTGTCCCACCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| CDS-3UTR GCA 90 bp | ATGGGTGGGACAGTACACAGTGGGGCAAAGGTGGGCTGCATGTGGTGCAGGTGCGAAGGCTGTTGGGGGTaGCCTTCCTCTGTGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MGGTVHSGAKVGCMWCRCEGCWG*PSSVSL Trigger: CAGGGACACAGAGGAAGGGCACCCCCAACAGCCTTC...GCACCTGCACCACATGCAGCCCACCTTTGCCCCACTGTGTACTGTCCCACCCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| CDS-3UTR TCA 90 bp | GGGACACGACGTAAGCAAGGCAGGCAGCACATGGAAGCCAGTGGTGCCAGGTGCTTTCCCCCTCCTTGTTaGTGGCTCCAGAGGACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GTRRKQGRQHMEASGARCFPPPC*WLQRTD Trigger: GTCTGTCCTCTGGAGCCATCAACAAGGAGGGGGAAA...GCACCTGGCACCACTGGCTTCCATGTGCTGCCTGCCTTGCTTACGTCGTGTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| CDS-3UTR GCA 90 bp | CTCCTAGACAAGGAGGACAGGGCTCTCTCTGCTTCCAGCCCTTCCTCTACAGATAGAGGACAGACCTCGTaGCTTGGGCTGCACCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLDKEDRALSASSPSSTDRGQTS*LGLHPA Trigger: TGCTGGGTGCAGCCCAAGGCACGAGGTCTGTCCTCT...ATCTGTAGAGGAAGGGCTGGAAGCAGAGAGAGCCCTGTCCTCCTTGTCTAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| CDS-3UTR CCA 90 bp | ATGGGTGGGACAGTACACAGTGGGGCAAAGGTGGGCTGCATGTGGTGCAGGTGCATGGCCGAGGAGAGCTaGTGGAACTTCTTTCGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MGGTVHSGAKVGCMWCRCMAEES*WNFFRA Trigger: TGCTCGAAAGAAGTTCCACCAGCTCTCCTCGGCCAT...GCACCTGCACCACATGCAGCCCACCTTTGCCCCACTGTGTACTGTCCCACCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| CDS-3UTR GCA 90 bp | CTCCTAGACAAGGAGGACAGGGCTCTCTCTGCTTCCAGCCCTTCCTCTACAGATGACTGCCTGACCACCTaGAAAGTATCTTCCTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLDKEDRALSASSPSSTDDCLTT*KVSSWG Trigger: ACCCCAGGAAGATACTTTGCAGGTGGTCAGGCAGTC...ATCTGTAGAGGAAGGGCTGGAAGCAGAGAGAGCCCTGTCCTCCTTGTCTAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR CAA 72 bp | GCCTTCTGTATTCTCCCCAGCCCCTCACAGGCAGATTaGTGCAGCCTGAAGCCCTGGTGTAGTGATGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: AFCILPSPSQAD*CSLKPWCSDET Trigger: TGTTTCATCACTACACCAGGGCTTCAGGCTGCACAAATCTGCCTGTGAGGGGCTGGGGAGAATACAGAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| CDS-3UTR CCA 90 bp | CTTCGTGACACTTCTCCAGTCTCACTTGAGTGTTGCTCATGGTCTGTACTATGCACAGACCTCGTGCCTTaGGCTGCACCCAGCAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRDTSPVSLECCSWSVLCTDLVP*AAPSSG Trigger: ACCACTGCTGGGTGCAGCCCAAGGCACGAGGTCTGT...GCATAGTACAGACCATGAGCAACACTCAAGTGAGACTGGAGAAGTGTCACGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| CDS-3UTR GCA 90 bp | GGAAGACAAGGGGAGCCCAGGACTACAAGGATCTGGGCAAAGACATTCACCTTAAGGATCTCATCGATGTaGAGCCGGCGGTTGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: GRQGEPRTTRIWAKTFTLRISSM*SRRLTS Trigger: AGATGTCAACCGCCGGCTGCACATCGATGAGATCCT...TAAGGTGAATGTCTTTGCCCAGATCCTTGTAGTCCTGGGCTCCCCTTGTCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| CDS-3UTR CCA 90 bp | AGCCCCCTACTCCTGGGCTGGGAAATGGTGGTATGTAGCAATTTAGGGCACAGTAGCGGTGGTTTAGCATaGCCAGAATCTCAATCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SPLLLGWEMVVCSNLGHSSGGLA*PESQSP Trigger: GGGAGATTGAGATTCTGGCCATGCTAAACCACCGCT...ACTGTGCCCTAAATTGCTACATACCACCATTTCCCAGCCCAGGAGTAGGGGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| CDS-3UTR CCA 90 bp | GACAGTACACAGTGGGGCAAAGGTGGGCTGCATGTGGTGCAGGTGCAAGAAGGTTTGACAATAGAGCGGTaGTTTAGCATGGCCAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: DSTQWGKGGLHVVQVQEGLTIER*FSMARI Trigger: GATTCTGGCCATGCTAAACCACCGCTCTATTGTCAA...ACCTTCTTGCACCTGCACCACATGCAGCCCACCTTTGCCCCACTGTGTACTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| CDS-3UTR TCA 90 bp | AGGAAGACAAGGGGAGCCCAGGACTACAAGGATCTGGGCAAAGACATTCACCTTCGTTCTCTGACTGCCTaGCCACCTGCAAAGTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RKTRGAQDYKDLGKDIHLRSLTA*PPAKYL Trigger: AAGATACTTTGCAGGTGGTCAGGCAGTCAGAGAACG...AAGGTGAATGTCTTTGCCCAGATCCTTGTAGTCCTGGGCTCCCCTTGTCTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| CDS-3UTR CCA 90 bp | ATGAAGTGCTGTGGCAGCGCTCACTGTCCACATGTTGGACTGTCTTGTGTTTTGGGCTGCACCCAGCAGTaGTTAAGGATCTCATCGATG | + |
|
Preference number: 4 (lower is better) Translates to: MKCCGSAHCPHVGLSCVLGCTQQ*LRISSM Trigger: CATCGATGAGATCCTTAACCACTGCTGGGTGCAGCC...CAAAACACAAGACAGTCCAACATGTGGACAGTGAGCGCTGCCACAGCACTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| CDS-3UTR TCA 90 bp | TCTCAGCCTCCCTCTAGAAGTTATCTTCTTCATTTAGCTCTCTTCTATGGCTTCTGTAGCCTCGTCGCTTaGGGACGGCAGCGTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQPPSRSYLLHLALFYGFCSLVA*GRQRHP Trigger: TGGATGACGCTGCCGTCCTCAAGCGACGAGGCTACA...GAAGCCATAGAAGAGAGCTAAATGAAGAAGATAACTTCTAGAGGGAGGCTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| CDS-3UTR TCA 90 bp | CTTCGTGACACTTCTCCAGTCTCACTTGAGTGTTGCTCATGGTCTGTACTATGCGGACCCCAAGCTCCATaGCAATGTAGACCTTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LRDTSPVSLECCSWSVLCGPQAP*QCRPCH Trigger: ATGGCAAGGTCTACATTGTCATGGAGCTTGGGGTCC...GCATAGTACAGACCATGAGCAACACTCAAGTGAGACTGGAGAAGTGTCACGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| CDS-3UTR TCA 90 bp | GTAGCATCCTGTGTACACCCTCTTGGCTCCTTTAGAAGTCCTCTGCTTATTTTCATCTTCCTGGGGTTTTaGCTCAGACCGGGCCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VASCVHPLGSFRSPLLIFIFLGF*LRPGLR Trigger: TCTGAGGCCCGGTCTGAGTCAAAACCCCAGGAAGAT...GAAAATAAGCAGAGGACTTCTAAAGGAGCCAAGAGGGTGTACACAGGATGCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| CDS-3UTR TCA 90 bp | GTCACATCCAGGAACTCACTGAACACTACTTTTCTAGGTTACTTGGCATTGGTGCTAAGTATGTGTCTCTaGAGGCTGTTGGGGGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VTSRNSLNTTFLGYLALVLSMCL*RLLGVP Trigger: GGGCACCCCCAACAGCCTTCAGAGACACATACTTAG...CACCAATGCCAAGTAACCTAGAAAAGTAGTGTTCAGTGAGTTCCTGGATGTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| CDS-3UTR CCA 90 bp | GACAAGAGGGAAAAGATGATATGGGGAACAAGAATATACCATAGAGGCCACCTTGTCTCTGAAGGCTGTTaGGGGTGCCCTTCCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: DKREKMIWGTRIYHRGHLVSEGC*GCPSSV Trigger: CACAGAGGAAGGGCACCCCCAACAGCCTTCAGAGAC...AAGGTGGCCTCTATGGTATATTCTTGTTCCCCATATCATCTTTTCCCTCTTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR CAA 72 bp | CTGTGGCAGCGCTCACTGTCCACATGTTGGACTGTCTaGTGTTTTGTGCATGGATGTATGTGTTGCAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LWQRSLSTCWTV*CFVHGCMCCKV Trigger: TACCTTGCAACACATACATCCATGCACAAAACACAAGACAGTCCAACATGTGGACAGTGAGCGCTGCCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| CDS-3UTR TCA 90 bp | CTTCGTGACACTTCTCCAGTCTCACTTGAGTGTTGCTCATGGTCTGTACTATGCTGCGCAGCATCTTTTTaGTGTTGGAGTCATCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRDTSPVSLECCSWSVLCCAASF*CWSHRR Trigger: CCTACGATGACTCCAACATCAAAAAGATGCTGCGCA...GCATAGTACAGACCATGAGCAACACTCAAGTGAGACTGGAGAAGTGTCACGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| CDS-3UTR CCA 90 bp | CATCAAACAGGAAGTGACATAGTCAGATGCAGAGTGGACAAGAGGGAAAAGATGCAGGTGTTTAGAGCGTaGAAAGTTGACACGGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HQTGSDIVRCRVDKREKMQVFRA*KVDTVL Trigger: GAGCACCGTGTCAACTTTCCACGCTCTAAACACCTG...CATCTTTTCCCTCTTGTCCACTCTGCATCTGACTATGTCACTTCCTGTTTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR CAA 72 bp | CTGAGTGCCAACTGGAAAGGGAGAACATGTCCAATGTaGTACAGAGCTGAAAAACCAGCTGCTAAGCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSANWKGRTCPM*YRAEKPAAKQV Trigger: GACTTGCTTAGCAGCTGGTTTTTCAGCTCTGTACAACATTGGACATGTTCTCCCTTTCCAGTTGGCACTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR CAA 72 bp | TCCAGGAACTCACTGAACACTACTTTTCTAGGTTACTaGGCATTGGTGTCTTCCCAAGGAAGAGGCATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SRNSLNTTFLGY*ALVSSQGRGIG Trigger: ACCTATGCCTCTTCCTTGGGAAGACACCAATGCCAAGTAACCTAGAAAAGTAGTGTTCAGTGAGTTCCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| CDS-3UTR GCA 90 bp | GTCACATCCAGGAACTCACTGAACACTACTTTTCTAGGTTACTTGGCATTGGTGACCCACAGAAGGTCTTaGTTAATATCAGTCGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: VTSRNSLNTTFLGYLALVTHRRS*LISVDH Trigger: GTGGTCGACTGATATTAAGCAAGACCTTCTGTGGGT...CACCAATGCCAAGTAACCTAGAAAAGTAGTGTTCAGTGAGTTCCTGGATGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| 3UTR CAA 72 bp | GCAGCCCTTATAGAACCTGACTCCTTTTTAAGGCGGTaGCTGTTAGGAAGAGAAGCTAATTGGCTTTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AALIEPDSFLRR*LLGREANWLWN Trigger: ATTCCAAAGCCAATTAGCTTCTCTTCCTAACAGCAACCGCCTTAAAAAGGAGTCAGGTTCTATAAGGGCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| CDS-3UTR TCA 90 bp | GTCACATCCAGGAACTCACTGAACACTACTTTTCTAGGTTACTTGGCATTGGTGGTAGACCTTGCCATCTaGTGTCTCAAAGATCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: VTSRNSLNTTFLGYLALVVDLAI*CLKDLI Trigger: TATGAGATCTTTGAGACATCAGATGGCAAGGTCTAC...CACCAATGCCAAGTAACCTAGAAAAGTAGTGTTCAGTGAGTTCCTGGATGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| CDS-3UTR CAA 90 bp | GTCCTAGTCTTAAAGCCCCTGAGTGACGCACACAGCAGGAGATCTTGTGTCACTGACAGACCTCGTGCCTaGGGCTGCACCCAGCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VLVLKPLSDAHSRRSCVTDRPRA*GCTQQW Trigger: CCACTGCTGGGTGCAGCCCAAGGCACGAGGTCTGTC...AGTGACACAAGATCTCCTGCTGTGTGCGTCACTCAGGGGCTTTAAGACTAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| CDS-3UTR CAA 90 bp | TGGTGCCAGGTGCAGGCCATGCCCATTTGGAATACCAGTAGCTGCCTTTCTTGCGAGCTTTCCCCCTCCTaGTTGATGGCTCCAGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: WCQVQAMPIWNTSSCLSCELSPS*LMAPED Trigger: GTCCTCTGGAGCCATCAACAAGGAGGGGGAAAGCTC...GCAAGAAAGGCAGCTACTGGTATTCCAAATGGGCATGGCCTGCACCTGGCACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| CDS-3UTR CAA 90 bp | AGGCAGCACATGGAAGCCAGTGGTGCCAGGTGCAGGCCATGCCCATTTGGAATAGACCCACAGAAGGTCTaGCTTAATATCAGTCGACCA | + |
|
Preference number: 5 (lower is better) Translates to: RQHMEASGARCRPCPFGIDPQKV*LNISRP Trigger: TGGTCGACTGATATTAAGCAAGACCTTCTGTGGGTC...TATTCCAAATGGGCATGGCCTGCACCTGGCACCACTGGCTTCCATGTGCTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| CDS-3UTR CAA 90 bp | CATCAAACAGGAAGTGACATAGTCAGATGCAGAGTGGACAAGAGGGAAAAGATGTCTGAGGGGGCTTTCTaGCGATCGATGATCTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: HQTGSDIVRCRVDKREKMSEGAF*RSMILT Trigger: GGTCAAGATCATCGATCGCAAGAAAGCCCCCTCAGA...CATCTTTTCCCTCTTGTCCACTCTGCATCTGACTATGTCACTTCCTGTTTGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| CDS-3UTR CAA 90 bp | GTCACATCCAGGAACTCACTGAACACTACTTTTCTAGGTTACTTGGCATTGGTGTCCCTAGGCTCCAACTaGGTGGCAGACTTCTTATCA | + |
|
Preference number: 5 (lower is better) Translates to: VTSRNSLNTTFLGYLALVSLGSN*VADFLS Trigger: TGATAAGAAGTCTGCCACCAAGTTGGAGCCTAGGGA...CACCAATGCCAAGTAACCTAGAAAAGTAGTGTTCAGTGAGTTCCTGGATGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| CDS CAA 72 bp | CATGAGGGCTCAGTGGCCCGGGAGCTTTCCCCCTCCTaGTTGATGGCTCCAGAGGACAGACCTCGTGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: HEGSVARELSPS*LMAPEDRPRAL Trigger: CAAGGCACGAGGTCTGTCCTCTGGAGCCATCAACAAGGAGGGGGAAAGCTCCCGGGCCACTGAGCCCTCATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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| CDS GCA 72 bp | CTGCTGAGGCCCACGTTCTCTGACTGCCTGACCACCTaGAAAGTATCTTCCTGGGGTTTTGACTCAGACCGG | + |
|
Preference number: 6 (lower is better) Translates to: LLRPTFSDCLTT*KVSSWGFDSDR Trigger: CCGGTCTGAGTCAAAACCCCAGGAAGATACTTTGCAGGTGGTCAGGCAGTCAGAGAACGTGGGCCTCAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046937.4 |
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