Pregenerated sensors for TSR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025264Ensembl transcript IDs: ENSMUST00000026295.10, ENSMUST00000112683.9, ENSMUST00000166010.2
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGGCGGGCCGTGGGGACACATTCTGCCCAGGGCCCACACTGTCTaGGGACAAGGAGATGGAGGAGACACCAGTGGCAGCCTCAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: QGGPWGHILPRAHTV*GQGDGGDTSGSLRS Trigger: GCTCCTGAGGCTGCCACTGGTGTCTCCTCCATCTCCTTGTCCTCAGACAGTGTGGGCCCTGGGCAGAATGTGTCCCCACGGCCCGCCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR GCA 90 bp | CGCTGGATGGCTGTTCTCGGCAGGGCGGGCCGTGGGGACACATTCTaGCCAGGGCCCACACTGTCTGAGGACAAGGAGATGGAGGAGACA | + |
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Preference number: 1 (lower is better) Translates to: RWMAVLGRAGRGDTF*PGPTLSEDKEMEET Trigger: TGTCTCCTCCATCTCCTTGTCCTCAGACAGTGTGGGCCCTGGGCAGAATGTGTCCCCACGGCCCGCCCTGCCGAGAACAGCCATCCAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR CCA 90 bp | GCTGGTACTTCAGCCCAGAGACAGAAGAACTCCAGCGGCGCTGGATaGCTGTTCTCGGCAGGGCGGGCCGTGGGGACACATTCTGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: AGTSAQRQKNSSGAG*LFSAGRAVGTHSAQ Trigger: CTGGGCAGAATGTGTCCCCACGGCCCGCCCTGCCGAGAACAGCCATCCAGCGCCGCTGGAGTTCTTCTGTCTCTGGGCTGAAGTACCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR CCA 90 bp | CTAAGCTGGTACTTCAGCCCAGAGACAGAAGAACTCCAGCGGCGCTaGATGGCTGTTCTCGGCAGGGCGGGCCGTGGGGACACATTCTGC | + |
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Preference number: 1 (lower is better) Translates to: LSWYFSPETEELQRR*MAVLGRAGRGDTFC Trigger: GCAGAATGTGTCCCCACGGCCCGCCCTGCCGAGAACAGCCATCCAGCGCCGCTGGAGTTCTTCTGTCTCTGGGCTGAAGTACCAGCTTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR CCA 90 bp | CAGGGCCCACACTGTCTGAGGACAAGGAGATGGAGGAGACACCAGTaGCAGCCTCAGGAGCCACTGCTGAACCTCCTGAAGCCTCCCAGA | + |
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Preference number: 1 (lower is better) Translates to: QGPHCLRTRRWRRHQ*QPQEPLLNLLKPPR Trigger: TCTGGGAGGCTTCAGGAGGTTCAGCAGTGGCTCCTGAGGCTGCCACTGGTGTCTCCTCCATCTCCTTGTCCTCAGACAGTGTGGGCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR CCA 90 bp | GGGACACATTCTGCCCAGGGCCCACACTGTCTGAGGACAAGGAGATaGAGGAGACACCAGTGGCAGCCTCAGGAGCCACTGCTGAACCTC | + |
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Preference number: 1 (lower is better) Translates to: GTHSAQGPHCLRTRR*RRHQWQPQEPLLNL Trigger: GAGGTTCAGCAGTGGCTCCTGAGGCTGCCACTGGTGTCTCCTCCATCTCCTTGTCCTCAGACAGTGTGGGCCCTGGGCAGAATGTGTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR TCA 90 bp | CCCTGTCCTGTGTCTCTGATCACAGAAACAGGCCTCGGTCGCTGCTaGGAACAGCGTCATCTGCAGCTTCCTGCACTACATGGAGAAGGG | + |
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Preference number: 1 (lower is better) Translates to: PCPVSLITETGLGRC*EQRHLQLPALHGEG Trigger: CCCTTCTCCATGTAGTGCAGGAAGCTGCAGATGACGCTGTTCTCAGCAGCGACCGAGGCCTGTTTCTGTGATCAGAGACACAGGACAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR CCA 90 bp | CCAGACAGGAGGCATGTCTTCAAGATCACACAAAGCCACCTAAGCTaGTACTTCAGCCCAGAGACAGAAGAACTCCAGCGGCGCTGGATG | + |
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Preference number: 1 (lower is better) Translates to: PDRRHVFKITQSHLS*YFSPETEELQRRWM Trigger: CATCCAGCGCCGCTGGAGTTCTTCTGTCTCTGGGCTGAAGTACCAGCTTAGGTGGCTTTGTGTGATCTTGAAGACATGCCTCCTGTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR GCA 90 bp | GATGGCACAAGGCATGGTTTGTGGTTCCTGAGAATGAACCCTTGGTaGTGTACATCTATGGAGCCCCTCAGGTGTGCATCCCACTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: DGTRHGLWFLRMNPW*CTSMEPLRCASHSF Trigger: GAAGGAGTGGGATGCACACCTGAGGGGCTCCATAGATGTACAGCACCAAGGGTTCATTCTCAGGAACCACAAACCATGCCTTGTGCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR TCA 90 bp | GAGCAAAGCCTTCCATCAACATTGATGTTCCCTGTCCTGTGTCTCTaGTCACAGAAACAGGCCTCGGTCGCTGCTGAGAACAGCGTCATC | + |
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Preference number: 1 (lower is better) Translates to: EQSLPSTLMFPVLCL*SQKQASVAAENSVI Trigger: GATGACGCTGTTCTCAGCAGCGACCGAGGCCTGTTTCTGTGATCAGAGACACAGGACAGGGAACATCAATGTTGATGGAAGGCTTTGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR CCA 90 bp | CCAACCGTCTTCAACTATATCCTCTTCCTTAATAGTCTGGGTGTCTaGATCAGAGGGTTGAGGCTGTGGGCAGACCTCGTCAGTTGTGGC | + |
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Preference number: 1 (lower is better) Translates to: PTVFNYILFLNSLGV*IRGLRLWADLVSCG Trigger: GCCACAACTGACGAGGTCTGCCCACAGCCTCAACCCTCTGATCCAGACACCCAGACTATTAAGGAAGAGGATATAGTTGAAGACGGTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166010.2 |
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| 3UTR TCA 90 bp | ATGTTCAATTGGGGGCTCCAGCCCACTCCCAATGCAGTCAATACTTaGATTCCCATCAAGGGCACTTTCAATCCCGAATGCTGGGTCATG | + |
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Preference number: 1 (lower is better) Translates to: MFNWGLQPTPNAVNT*IPIKGTFNPECWVM Trigger: CATGACCCAGCATTCGGGATTGAAAGTGCCCTTGATGGGAATTCAAGTATTGACTGCATTGGGAGTGGGCTGGAGCCCCCAATTGAACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR TCA 90 bp | CACTATGGGGCTGTTAAAGCCAAGAGCAAAGCCTTCCATCAACATTaGTGTTCCCTGTCCTGTGTCTCTGATCACAGAAACAGGCCTCGG | + |
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Preference number: 1 (lower is better) Translates to: HYGAVKAKSKAFHQH*CSLSCVSDHRNRPR Trigger: CCGAGGCCTGTTTCTGTGATCAGAGACACAGGACAGGGAACATCAATGTTGATGGAAGGCTTTGCTCTTGGCTTTAACAGCCCCATAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR TCA 90 bp | ACTATATCCTCTTCCTTAATAGTCTGGGTGTCTGGATCAGAGGGTTaGGGCTGTGGGCAGACCTCGTCAGTTGTGGCCCCATCATTAGTA | + |
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Preference number: 1 (lower is better) Translates to: TISSSLIVWVSGSEG*GCGQTSSVVAPSLV Trigger: TACTAATGATGGGGCCACAACTGACGAGGTCTGCCCACAGCCTCAACCCTCTGATCCAGACACCCAGACTATTAAGGAAGAGGATATAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166010.2 |
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| 3UTR GCA 90 bp | GCCAGCCTACCACTGTGGAATTCTGGTCCTTTCCACAAATGTACCTaGCAGTTTTCCACAAGTCTGGTCTACAACCACACCCACACTTGT | + |
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Preference number: 1 (lower is better) Translates to: ASLPLWNSGPFHKCT*QFSTSLVYNHTHTC Trigger: ACAAGTGTGGGTGTGGTTGTAGACCAGACTTGTGGAAAACTGGCAGGTACATTTGTGGAAAGGACCAGAATTCCACAGTGGTAGGCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 ENSMUST00000166010.2 |
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| 3UTR GCA 90 bp | CTTAGCCTTAAGAGTGGCCAGCATTTCACTGTCCCCACTGAGATCTaGACACCCCTTATACTTGTTGTTAAGAGTCAGCAGCAGCCAAGC | + |
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Preference number: 1 (lower is better) Translates to: LSLKSGQHFTVPTEI*TPLILVVKSQQQPS Trigger: GCTTGGCTGCTGCTGACTCTTAACAACAAGTATAAGGGGTGTGCAGATCTCAGTGGGGACAGTGAAATGCTGGCCACTCTTAAGGCTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR CCA 90 bp | ATTCTGGTCCTTTCCACAAATGTACCTGCCAGTTTTCCACAAGTCTaGTCTACAACCACACCCACACTTGTCAGCCGTCTTCATAGTCAC | + |
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Preference number: 1 (lower is better) Translates to: ILVLSTNVPASFPQV*STTTPTLVSRLHSH Trigger: GTGACTATGAAGACGGCTGACAAGTGTGGGTGTGGTTGTAGACCAGACTTGTGGAAAACTGGCAGGTACATTTGTGGAAAGGACCAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 ENSMUST00000166010.2 |
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| 3UTR TCA 90 bp | GCCTGCCTTCTAGTCCCAGTTCAGATATCTTCCTGTTCATTACAGTaGAATCAGTGTTCTTCAGCAGAGGGAAACAGCAGAACAGAGCAG | + |
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Preference number: 1 (lower is better) Translates to: ACLLVPVQISSCSLQ*NQCSSAEGNSRTEQ Trigger: CTGCTCTGTTCTGCTGTTTCCCTCTGCTGAAGAACACTGATTTCACTGTAATGAACAGGAAGATATCTGAACTGGGACTAGAAGGCAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR CCA 90 bp | GATGTCTACATCTTTTCTCTCTTCCAACTGTATGCTTATCCTGGCTaGATTACCAATCCAGCCAGCCTACCACTGTGGAATTCTGGTCCT | + |
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Preference number: 1 (lower is better) Translates to: DVYIFSLFQLYAYPG*ITNPASLPLWNSGP Trigger: AGGACCAGAATTCCACAGTGGTAGGCTGGCTGGATTGGTAATCCAGCCAGGATAAGCATACAGTTGGAAGAGAGAAAAGATGTAGACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 ENSMUST00000166010.2 |
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| 3UTR TCA 90 bp | CATAATGTTAGAAGGACTTTCTCAGAGCAGGCAATGAGTATATTATaGAAGATGAAAAGGGTTAGCTGTGAAAGTCCCTTAGCCTTAAGA | + |
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Preference number: 1 (lower is better) Translates to: HNVRRTFSEQAMSIL*KMKRVSCESPLALR Trigger: TCTTAAGGCTAAGGGACTTTCACAGCTAACCCTTTTCATCTTTCATAATATACTCATTGCCTGCTCTGAGAAAGTCCTTCTAACATTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR GCA 90 bp | ATCCCAAATGTAAGGGAGCTTACTCTGTACCAGAACTATTTTAAATaGCTTGCTTATGCTAATTTCAATCTCATAAACACCCTCTGTGCT | + |
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Preference number: 1 (lower is better) Translates to: IPNVRELTLYQNYFK*LAYANFNLINTLCA Trigger: AGCACAGAGGGTGTTTATGAGATTGAAATTAGCATAAGCAAGGCATTTAAAATAGTTCTGGTACAGAGTAAGCTCCCTTACATTTGGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR-3UTR GCA 90 bp | CTCCAGCGGCGCTGGATGGCTGTTCTCGGCAGGGCGGGCCGTGGGGACACATTCGCCCCACACTCCAGCTaGCCATGTTCAATTGGGGGC | + |
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Preference number: 2 (lower is better) Translates to: LQRRWMAVLGRAGRGDTFAPHSS*PCSIGG Trigger: GCCCCCAATTGAACATGGGCAGCTGGAGTGTGGGGC...GAATGTGTCCCCACGGCCCGCCCTGCCGAGAACAGCCATCCAGCGCCGCTGGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR-3UTR GCA 90 bp | CTCCAGCGGCGCTGGATGGCTGTTCTCGGCAGGGCGGGCCGTGGGGACACATTCGGAACTGGGAGTTTCTaGCCCACACTCCAGCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: LQRRWMAVLGRAGRGDTFGTGSF*PTLQLP Trigger: GGGCAGCTGGAGTGTGGGGCAGAAACTCCCAGTTCC...GAATGTGTCCCCACGGCCCGCCCTGCCGAGAACAGCCATCCAGCGCCGCTGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR-3UTR CCA 90 bp | AGCGGCGCTGGATGGCTGTTCTCGGCAGGGCGGGCCGTGGGGACACATTCTGCCCTGCCCATGTTCAATTaGGGGCTCCAGCCCACTCCC | + |
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Preference number: 2 (lower is better) Translates to: SGAGWLFSAGRAVGTHSALPMFN*GLQPTP Trigger: GGGAGTGGGCTGGAGCCCCCAATTGAACATGGGCAG...GGCAGAATGTGTCCCCACGGCCCGCCCTGCCGAGAACAGCCATCCAGCGCCGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR-3UTR GCA 90 bp | TCACAGAAACAGGCCTCGGTCGCTGCTGAGAACAGCGTCATCTGCAGCTTCCTGGGAACTGGGAGTTTCTaGCCCACACTCCAGCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: SQKQASVAAENSVICSFLGTGSF*PTLQLP Trigger: GGGCAGCTGGAGTGTGGGGCAGAAACTCCCAGTTCC...CAGGAAGCTGCAGATGACGCTGTTCTCAGCAGCGACCGAGGCCTGTTTCTGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGCTCCTCTCCTTGTCCTTTGGGGGCAGGGTGAGCCTAGCAAAGGGGAAACTGAGGACAAGGAGATaGAGGAGACACCAGTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: GLLLSLSFGGRVSLAKGKLRTRR*RRHQWQ Trigger: CTGCCACTGGTGTCTCCTCCATCTCCTTGTCCTCAG...TTTCCCCTTTGCTAGGCTCACCCTGCCCCCAAAGGACAAGGAGAGGAGCAGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR CAA 90 bp | GGGAACTGGGAGTTTCTGCCCCACACTCCAGCTGCCCATGTTCAATaGGGGGCTCCAGCCCACTCCCAATGCAGTCAATACTTGAATTCC | + |
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Preference number: 2 (lower is better) Translates to: GNWEFLPHTPAAHVQ*GAPAHSQCSQYLNS Trigger: GGAATTCAAGTATTGACTGCATTGGGAGTGGGCTGGAGCCCCCAATTGAACATGGGCAGCTGGAGTGTGGGGCAGAAACTCCCAGTTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR-3UTR TCA 90 bp | AACTTTCAGAGCACTGCTATGGTCCGTCCGTTTGTCCAAAGTCCCAGGCTACTATGCCAGCTCTGCTACTaGCCCTGGGACCCCAACCCA | + |
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Preference number: 2 (lower is better) Translates to: NFQSTAMVRPFVQSPRLLCQLCY*PWDPNP Trigger: TGGGTTGGGGTCCCAGGGTCAGTAGCAGAGCTGGCA...TAGTAGCCTGGGACTTTGGACAAACGGACGGACCATAGCAGTGCTCTGAAAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR-3UTR CCA 90 bp | GTTAAGAGTCAGCAGCAGCCAAGCCTTGCTTTGTTTTATCTCCATGATGAAGGCCCATGGCAGGGCCACTaGGCAGGACGGGAATGGGGG | + |
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Preference number: 2 (lower is better) Translates to: VKSQQQPSLALFYLHDEGPWQGH*AGREWG Trigger: CCCCCATTCCCGTCCTGCCCAGTGGCCCTGCCATGG...GCCTTCATCATGGAGATAAAACAAAGCAAGGCTTGGCTGCTGCTGACTCTTAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR-3UTR CCA 90 bp | CACACAAAGCCACCTAAGCTGGTACTTCAGCCCAGAGACAGAAGAACTCCAGCGTATCGTCCAGATCCATaGCAGGGCCACTGGGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: HTKPPKLVLQPRDRRTPAYRPDP*QGHWAG Trigger: TCCTGCCCAGTGGCCCTGCCATGGATCTGGACGATA...CGCTGGAGTTCTTCTGTCTCTGGGCTGAAGTACCAGCTTAGGTGGCTTTGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR-3UTR TCA 90 bp | GTTGTTCTGAGGGAGGCTAGGGTGGGGACATTGGGGAATGTAGAGATGTCTACAGGGCTTTCCTTCTCCTaGAGGGAAGGACAGGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: VVLREARVGTLGNVEMSTGLSFS*REGQGN Trigger: GTTCCCCTGTCCTTCCCTTCAGGAGAAGGAAAGCCC...TGTAGACATCTCTACATTCCCCAATGTCCCCACCCTAGCCTCCCTCAGAACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 ENSMUST00000166010.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGTACATCTATGGAGCCCCTCAGGTGTGCATCCCACTCCTTCAGGTTTTTCCCCTTACATGGGGTGGTaGCTAGACCCTTCTTGCCTT | + |
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Preference number: 2 (lower is better) Translates to: AVHLWSPSGVHPTPSGFSPYMGW*LDPSCL Trigger: AAGGCAAGAAGGGTCTAGTCACCACCCCATGTAAGG...GGAAAAACCTGAAGGAGTGGGATGCACACCTGAGGGGCTCCATAGATGTACAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR-3UTR CCA 90 bp | CTTTCCACAAATGTACCTGCCAGTTTTCCACAAGTCTGGTCTACAACCACACCCATGGTCTGTAGCTGTTaGCTCACCTGGGGCAGACTC | + |
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Preference number: 2 (lower is better) Translates to: LSTNVPASFPQVWSTTTPMVCSC*LTWGRL Trigger: GAGTCTGCCCCAGGTGAGCCAACAGCTACAGACCAT...GGGTGTGGTTGTAGACCAGACTTGTGGAAAACTGGCAGGTACATTTGTGGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166010.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCTGAGGGAGGCTAGGGTGGGGACATTGGGGAATGTAGAGATGTCTACATCTGGAAGTGGTGGAACATaGTCTGTAGCTGTTGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: VLREARVGTLGNVEMSTSGSGGT*SVAVGS Trigger: TGAGCCAACAGCTACAGACCATGTTCCACCACTTCC...AGATGTAGACATCTCTACATTCCCCAATGTCCCCACCCTAGCCTCCCTCAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166010.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGTCCTTCAAACTCTCAAGGGTATTCAAACAGGGAGCATTCCCAGGAGGATGGCCCCATCACCCTTCTaGAAGTGGTGGAACATGGTC | + |
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Preference number: 2 (lower is better) Translates to: QVLQTLKGIQTGSIPRRMAPSPF*KWWNMV Trigger: GACCATGTTCCACCACTTCCAGAAGGGTGATGGGGC...CATCCTCCTGGGAATGCTCCCTGTTTGAATACCCTTGAGAGTTTGAAGGACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166010.2 |
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| 3UTR CAA 90 bp | TACCTGCCAGTTTTCCACAAGTCTGGTCTACAACCACACCCACACTaGTCAGCCGTCTTCATAGTCACTGCACCTAGGAGGTACTATGCT | + |
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Preference number: 2 (lower is better) Translates to: YLPVFHKSGLQPHPH*SAVFIVTAPRRYYA Trigger: AGCATAGTACCTCCTAGGTGCAGTGACTATGAAGACGGCTGACAAGTGTGGGTGTGGTTGTAGACCAGACTTGTGGAAAACTGGCAGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 ENSMUST00000166010.2 |
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| 3UTR CAA 90 bp | CATGTTCAATTGGGGGCTCCAGCCCACTCCCAATGCAGTCAATACTaGAATTCCCATCAAGGGCACTTTCAATCCCGAATGCTGGGTCAT | + |
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Preference number: 2 (lower is better) Translates to: HVQLGAPAHSQCSQY*NSHQGHFQSRMLGH Trigger: ATGACCCAGCATTCGGGATTGAAAGTGCCCTTGATGGGAATTCAAGTATTGACTGCATTGGGAGTGGGCTGGAGCCCCCAATTGAACATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR CAA 90 bp | AACTATATCCTCTTCCTTAATAGTCTGGGTGTCTGGATCAGAGGGTaGAGGCTGTGGGCAGACCTCGTCAGTTGTGGCCCCATCATTAGT | + |
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Preference number: 2 (lower is better) Translates to: NYILFLNSLGVWIRG*RLWADLVSCGPIIS Trigger: ACTAATGATGGGGCCACAACTGACGAGGTCTGCCCACAGCCTCAACCCTCTGATCCAGACACCCAGACTATTAAGGAAGAGGATATAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166010.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCAACAAAACCAAGGTATCCCAAATGTAAGGGAGCTTACTCTGTACCAGAACTGCCAGCTCTGCTACTaGCCCTGGGACCCCAACCCA | + |
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Preference number: 2 (lower is better) Translates to: FQQNQGIPNVRELTLYQNCQLCY*PWDPNP Trigger: TGGGTTGGGGTCCCAGGGTCAGTAGCAGAGCTGGCA...GTTCTGGTACAGAGTAAGCTCCCTTACATTTGGGATACCTTGGTTTTGTTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR-3UTR GCA 90 bp | GCTCCCCACAAAAGTACCAGAGGCAGGAGACCTGGATTCAAGTGCCAGCTCTGCCAGAAACTACTCTCTTaGCAAATTTTGAAGCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: APHKSTRGRRPGFKCQLCQKLLS*QILKLS Trigger: GCTGAGCTTCAAAATTTGGCAAGAGAGTAGTTTCTG...GCAGAGCTGGCACTTGAATCCAGGTCTCCTGCCTCTGGTACTTTTGTGGGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR-3UTR TCA 90 bp | GCTGTACATCTATGGAGCCCCTCAGGTGTGCATCCCACTCCTTCAGGTTTTTCCAATGCAGTCAATACTTaGATTCCCATCAAGGGCACT | + |
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Preference number: 2 (lower is better) Translates to: AVHLWSPSGVHPTPSGFSNAVNT*IPIKGT Trigger: AGTGCCCTTGATGGGAATTCAAGTATTGACTGCATT...GGAAAAACCTGAAGGAGTGGGATGCACACCTGAGGGGCTCCATAGATGTACAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR-3UTR GCA 90 bp | GCTGTACATCTATGGAGCCCCTCAGGTGTGCATCCCACTCCTTCAGGTTTTTCCCAGAAACTACTCTCTTaGCAAATTTTGAAGCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: AVHLWSPSGVHPTPSGFSQKLLS*QILKLS Trigger: GCTGAGCTTCAAAATTTGGCAAGAGAGTAGTTTCTG...GGAAAAACCTGAAGGAGTGGGATGCACACCTGAGGGGCTCCATAGATGTACAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR-3UTR TCA 90 bp | AGCCAAGCCTTGCTTTGTTTTATCTCCATGATGAAGGCTAAATCATTTCAGCTAGGGCTTTCCTTCTCCTaGAGGGAAGGACAGGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: SQALLCFISMMKAKSFQLGLSFS*REGQGN Trigger: GTTCCCCTGTCCTTCCCTTCAGGAGAAGGAAAGCCC...TAGCTGAAATGATTTAGCCTTCATCATGGAGATAAAACAAAGCAAGGCTTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR-3UTR TCA 90 bp | AACTTTCAGAGCACTGCTATGGTCCGTCCGTTTGTCCAAAGTCCCAGGCTACTATCTCTTGCCAAATTTTaGAGCTCAGCTTGCAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: NFQSTAMVRPFVQSPRLLSLAKF*SSACRK Trigger: CTTTCTGCAAGCTGAGCTTCAAAATTTGGCAAGAGA...TAGTAGCCTGGGACTTTGGACAAACGGACGGACCATAGCAGTGCTCTGAAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 ENSMUST00000166010.2 |
||
| 3UTR-3UTR TCA 90 bp | GCATACAGTAACTTTCAGAGCACTGCTATGGTCCGTCCGTTTGTCCAAAGTCCCTCTCTTGCCAAATTTTaGAGCTCAGCTTGCAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: AYSNFQSTAMVRPFVQSPSLAKF*SSACRK Trigger: CTTTCTGCAAGCTGAGCTTCAAAATTTGGCAAGAGA...GGGACTTTGGACAAACGGACGGACCATAGCAGTGCTCTGAAAGTTACTGTATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 ENSMUST00000166010.2 |
||
| 3UTR-3UTR CCA 90 bp | GTTGTTCTGAGGGAGGCTAGGGTGGGGACATTGGGGAATGTAGAGATGTCTACAAACAAAGAAGGGTTATaGTTTCCAGAACAGAGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: VVLREARVGTLGNVEMSTNKEGL*FPEQRC Trigger: ACACCTCTGTTCTGGAAACCATAACCCTTCTTTGTT...TGTAGACATCTCTACATTCCCCAATGTCCCCACCCTAGCCTCCCTCAGAACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 ENSMUST00000166010.2 |
||
| 3UTR-3UTR CCA 90 bp | CCAAAGTCCCAGGCTACTAAGGGAGATGGGAGGGTACAGAAACTACTCTCTTGCAACAAAGAAGGGTTATaGTTTCCAGAACAGAGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: PKSQATKGDGRVQKLLSCNKEGL*FPEQRC Trigger: ACACCTCTGTTCTGGAAACCATAACCCTTCTTTGTT...GCAAGAGAGTAGTTTCTGTACCCTCCCATCTCCCTTAGTAGCCTGGGACTTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 ENSMUST00000166010.2 |
||
| 3UTR-3UTR CCA 90 bp | GTTAAGAGTCAGCAGCAGCCAAGCCTTGCTTTGTTTTATCTCCATGATGAAGGCAGTTTTCCACAAGTCTaGTCTACAACCACACCCACA | + |
|
Preference number: 2 (lower is better) Translates to: VKSQQQPSLALFYLHDEGSFPQV*STTTPT Trigger: TGTGGGTGTGGTTGTAGACCAGACTTGTGGAAAACT...GCCTTCATCATGGAGATAAAACAAAGCAAGGCTTGGCTGCTGCTGACTCTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
||
| 3UTR-3UTR GCA 90 bp | TTATTTCAGGCATACAGTAACTTTCAGAGCACTGCTATGGTCCGTCCGTTTGTCAAACATGTACTGCCCTaGTCATTTCTTTCTCCGGAC | + |
|
Preference number: 2 (lower is better) Translates to: LFQAYSNFQSTAMVRPFVKHVLP*SFLSPD Trigger: GTCCGGAGAAAGAAATGAGCAGGGCAGTACATGTTT...GACAAACGGACGGACCATAGCAGTGCTCTGAAAGTTACTGTATGCCTGAAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166010.2 |
||
| 3UTR-3UTR CCA 90 bp | TTATTTCAGGCATACAGTAACTTTCAGAGCACTGCTATGGTCCGTCCGTTTGTCTCTTTCTCCGGACAATaGTCCAACCGTCTTCAACTA | + |
|
Preference number: 2 (lower is better) Translates to: LFQAYSNFQSTAMVRPFVSFSGQ*SNRLQL Trigger: TAGTTGAAGACGGTTGGACCATTGTCCGGAGAAAGA...GACAAACGGACGGACCATAGCAGTGCTCTGAAAGTTACTGTATGCCTGAAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166010.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGGAGCTTACTCTGTACCAGAACTATTTTAAATGCCTTGCTTATGCTAATTTCCAAAGCCACCTAAGCTaGTACTTCAGCCCAGAGACA | + |
|
Preference number: 2 (lower is better) Translates to: RELTLYQNYFKCLAYANFQSHLS*YFSPET Trigger: TGTCTCTGGGCTGAAGTACCAGCTTAGGTGGCTTTG...GAAATTAGCATAAGCAAGGCATTTAAAATAGTTCTGGTACAGAGTAAGCTCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
||
| 3UTR-3UTR TCA 90 bp | AGGGAGCTTACTCTGTACCAGAACTATTTTAAATGCCTTGCTTATGCTAATTTCTCTCTTGCCAAATTTTaGAGCTCAGCTTGCAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: RELTLYQNYFKCLAYANFSLAKF*SSACRK Trigger: CTTTCTGCAAGCTGAGCTTCAAAATTTGGCAAGAGA...GAAATTAGCATAAGCAAGGCATTTAAAATAGTTCTGGTACAGAGTAAGCTCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
||
| 3UTR-3UTR TCA 90 bp | AGCCAAGCCTTGCTTTGTTTTATCTCCATGATGAAGGCTAAATCATTTCAGCTAATTGCTAGACTCACTTaGATTAGTTTCCTCCCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: SQALLCFISMMKAKSFQLIARLT*ISFLPV Trigger: TACTGGGAGGAAACTAATTCAAGTGAGTCTAGCAAT...TAGCTGAAATGATTTAGCCTTCATCATGGAGATAAAACAAAGCAAGGCTTGGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
||
| 3UTR-3UTR CCA 90 bp | AGGGAGCTTACTCTGTACCAGAACTATTTTAAATGCCTTGCTTATGCTAATTTCAACAAAGAAGGGTTATaGTTTCCAGAACAGAGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: RELTLYQNYFKCLAYANFNKEGL*FPEQRC Trigger: ACACCTCTGTTCTGGAAACCATAACCCTTCTTTGTT...GAAATTAGCATAAGCAAGGCATTTAAAATAGTTCTGGTACAGAGTAAGCTCCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
||
| 3UTR CCA 72 bp | TACTTCAGCCCAGAGACAGAAGAACTCCAGCGGCGCTaGATGGCTGTTCTCGGCAGGGCGGGCCGTGGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: YFSPETEELQRR*MAVLGRAGRGD Trigger: GTCCCCACGGCCCGCCCTGCCGAGAACAGCCATCCAGCGCCGCTGGAGTTCTTCTGTCTCTGGGCTGAAGTA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
||
| 3UTR CCA 72 bp | GAGCAGCCCCATCACCCTTCTGGAAGTGGTGGAACATaGTCTGTAGCTGTTGGCTCACCTGGGGCAGACTCC | + |
|
Preference number: 3 (lower is better) Translates to: EQPHHPSGSGGT*SVAVGSPGADS Trigger: GGAGTCTGCCCCAGGTGAGCCAACAGCTACAGACCATGTTCCACCACTTCCAGAAGGGTGATGGGGCTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166010.2 |
||
| 3UTR CCA 72 bp | CCCAGCTCCCCACAAAAGTACCAGAGGCAGGAGACCTaGATTCAAGTGCCAGCTCTGCTACTGACCCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: PSSPQKYQRQET*IQVPALLLTLG Trigger: TCCCAGGGTCAGTAGCAGAGCTGGCACTTGAATCCAGGTCTCCTGCCTCTGGTACTTTTGTGGGGAGCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
||
| 3UTR-3UTR CAA 90 bp | TCACAGAAACAGGCCTCGGTCGCTGCTGAGAACAGCGTCATCTGCAGCTTCCTGGCAGAACAGAGCAGTTaGACTGGGCAGAGGATACTG | + |
|
Preference number: 3 (lower is better) Translates to: SQKQASVAAENSVICSFLAEQSS*TGQRIL Trigger: CAGTATCCTCTGCCCAGTCAAACTGCTCTGTTCTGC...CAGGAAGCTGCAGATGACGCTGTTCTCAGCAGCGACCGAGGCCTGTTTCTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
||
| 3UTR TCA 72 bp | CCCCAGGGAGGGCGGGAGCTAATTGCTAGACTCACTTaGATTAGTTTCCTCCCAGTACCCCACTTCCACCCA | + |
|
Preference number: 3 (lower is better) Translates to: PQGGRELIARLT*ISFLPVPHFHP Trigger: TGGGTGGAAGTGGGGTACTGGGAGGAAACTAATTCAAGTGAGTCTAGCAATTAGCTCCCGCCCTCCCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
||
| 3UTR TCA 72 bp | TCTTCCTTAATAGTCTGGGTGTCTGGATCAGAGGGTTaGGGCTGTGGGCAGACCTCGTCAGTTGTGGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SSLIVWVSGSEG*GCGQTSSVVAP Trigger: TGGGGCCACAACTGACGAGGTCTGCCCACAGCCTCAACCCTCTGATCCAGACACCCAGACTATTAAGGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166010.2 |
||
| 3UTR CCA 72 bp | AGTTTCTGCCCCACACTCCAGCTGCCCATGTTCAATTaGGGGCTCCAGCCCACTCCCAATGCAGTCAATACT | + |
|
Preference number: 3 (lower is better) Translates to: SFCPTLQLPMFN*GLQPTPNAVNT Trigger: AGTATTGACTGCATTGGGAGTGGGCTGGAGCCCCCAATTGAACATGGGCAGCTGGAGTGTGGGGCAGAAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
||
| 3UTR TCA 72 bp | GATGACACTAGTTCTCTGTTCCTTCTCTCCAGGATGTaGAAGCCCAGCGCAGCCTGCCCCTCATTGGCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: DDTSSLFLLSRM*KPSAACPSLAL Trigger: CAAAGCCAATGAGGGGCAGGCTGCGCTGGGCTTTCACATCCTGGAGAGAAGGAACAGAGAACTAGTGTCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
||
| 3UTR TCA 72 bp | GTGTCTCTGATCACAGAAACAGGCCTCGGTCGCTGCTaGGAACAGCGTCATCTGCAGCTTCCTGCACTACAT | + |
|
Preference number: 3 (lower is better) Translates to: VSLITETGLGRC*EQRHLQLPALH Trigger: ATGTAGTGCAGGAAGCTGCAGATGACGCTGTTCTCAGCAGCGACCGAGGCCTGTTTCTGTGATCAGAGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
||
| 3UTR TCA 72 bp | TGGGGGCTCCAGCCCACTCCCAATGCAGTCAATACTTaGATTCCCATCAAGGGCACTTTCAATCCCGAATGC | + |
|
Preference number: 3 (lower is better) Translates to: WGLQPTPNAVNT*IPIKGTFNPEC Trigger: GCATTCGGGATTGAAAGTGCCCTTGATGGGAATTCAAGTATTGACTGCATTGGGAGTGGGCTGGAGCCCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
||
| 3UTR GCA 72 bp | AGGCATGGTTTGTGGTTCCTGAGAATGAACCCTTGGTaGTGTACATCTATGGAGCCCCTCAGGTGTGCATCC | + |
|
Preference number: 3 (lower is better) Translates to: RHGLWFLRMNPW*CTSMEPLRCAS Trigger: GGATGCACACCTGAGGGGCTCCATAGATGTACAGCACCAAGGGTTCATTCTCAGGAACCACAAACCATGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
||
| 3UTR CCA 72 bp | CCTGGCTGGATTACCAATCCAGCCAGCCTACCACTGTaGAATTCTGGTCCTTTCCACAAATGTACCTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PGWITNPASLPL*NSGPFHKCTCQ Trigger: CTGGCAGGTACATTTGTGGAAAGGACCAGAATTCCACAGTGGTAGGCTGGCTGGATTGGTAATCCAGCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 ENSMUST00000166010.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCCCATGTTCAATTGGGGGCTCCAGCCCACTCCCAATGCAGTCAATACTTGAAGCTAGGGTGGGGACATaGGGGAATGTAGAGATGTCT | + |
|
Preference number: 3 (lower is better) Translates to: CPCSIGGSSPLPMQSILEARVGT*GNVEMS Trigger: AGACATCTCTACATTCCCCAATGTCCCCACCCTAGC...TTCAAGTATTGACTGCATTGGGAGTGGGCTGGAGCCCCCAATTGAACATGGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
||
| 3UTR TCA 72 bp | CTTCCATCAACATTGATGTTCCCTGTCCTGTGTCTCTaGTCACAGAAACAGGCCTCGGTCGCTGCTGAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: LPSTLMFPVLCL*SQKQASVAAEN Trigger: GTTCTCAGCAGCGACCGAGGCCTGTTTCTGTGATCAGAGACACAGGACAGGGAACATCAATGTTGATGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
||
| 3UTR GCA 72 bp | GCCCATGTTCAATTGGGGGCTCCAGCCCACTCCCAATaGAGTCAATACTTGAATTCCCATCAAGGGCACTTT | + |
|
Preference number: 3 (lower is better) Translates to: AHVQLGAPAHSQ*SQYLNSHQGHF Trigger: AAAGTGCCCTTGATGGGAATTCAAGTATTGACTGCATTGGGAGTGGGCTGGAGCCCCCAATTGAACATGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
||
| 3UTR CCA 72 bp | AGGCATGTCTTCAAGATCACACAAAGCCACCTAAGCTaGTACTTCAGCCCAGAGACAGAAGAACTCCAGCGG | + |
|
Preference number: 3 (lower is better) Translates to: RHVFKITQSHLS*YFSPETEELQR Trigger: CCGCTGGAGTTCTTCTGTCTCTGGGCTGAAGTACCAGCTTAGGTGGCTTTGTGTGATCTTGAAGACATGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
||
| 3UTR-3UTR CAA 90 bp | GTCAAGTCCTTCAAACTCTCAAGGGTATTCAAACAGGGAGCATTCCCAGGAGGAGCTAGGGTGGGGACATaGGGGAATGTAGAGATGTCT | + |
|
Preference number: 3 (lower is better) Translates to: VKSFKLSRVFKQGAFPGGARVGT*GNVEMS Trigger: AGACATCTCTACATTCCCCAATGTCCCCACCCTAGC...TCCTCCTGGGAATGCTCCCTGTTTGAATACCCTTGAGAGTTTGAAGGACTTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 ENSMUST00000166010.2 |
||
| 3UTR CCA 72 bp | TTCAACTATATCCTCTTCCTTAATAGTCTGGGTGTCTaGATCAGAGGGTTGAGGCTGTGGGCAGACCTCGTC | + |
|
Preference number: 3 (lower is better) Translates to: FNYILFLNSLGV*IRGLRLWADLV Trigger: GACGAGGTCTGCCCACAGCCTCAACCCTCTGATCCAGACACCCAGACTATTAAGGAAGAGGATATAGTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166010.2 |
||
| 3UTR GCA 72 bp | CCACTGTGGAATTCTGGTCCTTTCCACAAATGTACCTaGCAGTTTTCCACAAGTCTGGTCTACAACCACACC | + |
|
Preference number: 3 (lower is better) Translates to: PLWNSGPFHKCT*QFSTSLVYNHT Trigger: GGTGTGGTTGTAGACCAGACTTGTGGAAAACTGGCAGGTACATTTGTGGAAAGGACCAGAATTCCACAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 ENSMUST00000166010.2 |
||
| 3UTR GCA 72 bp | AAGAGTGGCCAGCATTTCACTGTCCCCACTGAGATCTaGACACCCCTTATACTTGTTGTTAAGAGTCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: KSGQHFTVPTEI*TPLILVVKSQQ Trigger: CTGCTGACTCTTAACAACAAGTATAAGGGGTGTGCAGATCTCAGTGGGGACAGTGAAATGCTGGCCACTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
||
| 3UTR GCA 72 bp | CATTTAACAAACGAGGGCCCAAAACATGTACTGCCCTaGTCATTTCTTTCTCCGGACAATGGTCCAACCGTC | + |
|
Preference number: 3 (lower is better) Translates to: HLTNEGPKHVLP*SFLSPDNGPTV Trigger: GACGGTTGGACCATTGTCCGGAGAAAGAAATGAGCAGGGCAGTACATGTTTTGGGCCCTCGTTTGTTAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166010.2 |
||
| 3UTR CCA 72 bp | GGTACTATGCTGGGAAACCTGCTCTTAGCTCTCATATaGTACCTTAAGATTCAAGGGGCTGGAATAGGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: GTMLGNLLLALI*YLKIQGAGIGP Trigger: GGGACCTATTCCAGCCCCTTGAATCTTAAGGTACCATATGAGAGCTAAGAGCAGGTTTCCCAGCATAGTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 ENSMUST00000166010.2 |
||
| 3UTR CCA 72 bp | CTTTCCACAAATGTACCTGCCAGTTTTCCACAAGTCTaGTCTACAACCACACCCACACTTGTCAGCCGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LSTNVPASFPQV*STTTPTLVSRL Trigger: AAGACGGCTGACAAGTGTGGGTGTGGTTGTAGACCAGACTTGTGGAAAACTGGCAGGTACATTTGTGGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 ENSMUST00000166010.2 |
||
| 3UTR CCA 72 bp | TTTGGAGGCCAAGGTATGGGGACAATGAGGGTGAGGTaGGAAGTCTGGCTTTCTGGAGAAAACAGTAGAATA | + |
|
Preference number: 3 (lower is better) Translates to: FGGQGMGTMRVR*EVWLSGENSRI Trigger: TATTCTACTGTTTTCTCCAGAAAGCCAGACTTCCCACCTCACCCTCATTGTCCCCATACCTTGGCCTCCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
||
| 3UTR-3UTR CAA 90 bp | CCAAAGTCCCAGGCTACTAAGGGAGATGGGAGGGTACAGAAACTACTCTCTTGCATTTTGAAGCTCAGCTaGCAGAAAGCTGATTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: PKSQATKGDGRVQKLLSCILKLS*QKADSK Trigger: CTTGGAATCAGCTTTCTGCAAGCTGAGCTTCAAAAT...GCAAGAGAGTAGTTTCTGTACCCTCCCATCTCCCTTAGTAGCCTGGGACTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 ENSMUST00000166010.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAAAGTCCCAGGCTACTAAGGGAGATGGGAGGGTACAGAAACTACTCTCTTGCACAGAAACTACTCTCTaGCCAAATTTTGAAGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: PKSQATKGDGRVQKLLSCTETTL*PNFEAQ Trigger: CTGAGCTTCAAAATTTGGCAAGAGAGTAGTTTCTGT...GCAAGAGAGTAGTTTCTGTACCCTCCCATCTCCCTTAGTAGCCTGGGACTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 ENSMUST00000166010.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTCATTTCTTTCTCCGGACAATGGTCCAACCGTCTTCAACTATATCCTCTTGCCACATCAGTTTCTTaGGCTGTCATAAGTGGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: LLISFSGQWSNRLQLYPLATSVS*AVISGV Trigger: TACCCCACTTATGACAGCCAAAGAAACTGATGTGGC...AAGAGGATATAGTTGAAGACGGTTGGACCATTGTCCGGAGAAAGAAATGAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166010.2 |
||
| 3UTR TCA 72 bp | GCTGTTAAAGCCAAGAGCAAAGCCTTCCATCAACATTaGTGTTCCCTGTCCTGTGTCTCTGATCACAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: AVKAKSKAFHQH*CSLSCVSDHRN Trigger: GTTTCTGTGATCAGAGACACAGGACAGGGAACATCAATGTTGATGGAAGGCTTTGCTCTTGGCTTTAACAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
||
| 3UTR CCA 72 bp | ATCTTTTCTCTCTTCCAACTGTATGCTTATCCTGGCTaGATTACCAATCCAGCCAGCCTACCACTGTGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: IFSLFQLYAYPG*ITNPASLPLWN Trigger: ATTCCACAGTGGTAGGCTGGCTGGATTGGTAATCCAGCCAGGATAAGCATACAGTTGGAAGAGAGAAAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 ENSMUST00000166010.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTAAGAGTCAGCAGCAGCCAAGCCTTGCTTTGTTTTATCTCCATGATGAAGGCCTCTCTTGCCAAATTTaGAAGCTCAGCTTGCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: VKSQQQPSLALFYLHDEGLSCQI*KLSLQK Trigger: TTTCTGCAAGCTGAGCTTCAAAATTTGGCAAGAGAG...GCCTTCATCATGGAGATAAAACAAAGCAAGGCTTGGCTGCTGCTGACTCTTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
||
| 3UTR TCA 72 bp | ATGGGAGGGTACAGAAACTACTCTCTTGCCAAATTTTaGAGCTCAGCTTGCAGAAAGCTGATTCCAAGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: MGGYRNYSLAKF*SSACRKLIPRL Trigger: TAACCTTGGAATCAGCTTTCTGCAAGCTGAGCTTCAAAATTTGGCAAGAGAGTAGTTTCTGTACCCTCCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 ENSMUST00000166010.2 |
||
| 3UTR TCA 72 bp | CTAGTCCCAGTTCAGATATCTTCCTGTTCATTACAGTaGAATCAGTGTTCTTCAGCAGAGGGAAACAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LVPVQISSCSLQ*NQCSSAEGNSR Trigger: TCTGCTGTTTCCCTCTGCTGAAGAACACTGATTTCACTGTAATGAACAGGAAGATATCTGAACTGGGACTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTCAACAAAACCAAGGTATCCCAAATGTAAGGGAGCTTACTCTGTACCAGAACCAATGCAGTCAATACTaGAATTCCCATCAAGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: FQQNQGIPNVRELTLYQNQCSQY*NSHQGH Trigger: GTGCCCTTGATGGGAATTCAAGTATTGACTGCATTG...GTTCTGGTACAGAGTAAGCTCCCTTACATTTGGGATACCTTGGTTTTGTTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
||
| 3UTR GCA 72 bp | GTAAGGGAGCTTACTCTGTACCAGAACTATTTTAAATaGCTTGCTTATGCTAATTTCAATCTCATAAACACC | + |
|
Preference number: 3 (lower is better) Translates to: VRELTLYQNYFK*LAYANFNLINT Trigger: GGTGTTTATGAGATTGAAATTAGCATAAGCAAGGCATTTAAAATAGTTCTGGTACAGAGTAAGCTCCCTTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
||
| CDS-3UTR TCA 90 bp | CTCCAGCGGCGCTGGATGGCTGTTCTCGGCAGGGCGGGCCGTGGGGACACATTCAGTCAGCATTGGCGATaGAGTAATCCTCCACTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LQRRWMAVLGRAGRGDTFSQHWR*SNPPLH Trigger: GTGCAGTGGAGGATTACTTCATCGCCAATGCTGACT...GAATGTGTCCCCACGGCCCGCCCTGCCGAGAACAGCCATCCAGCGCCGCTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
||
| CDS-3UTR TCA 90 bp | AGCGGCGCTGGATGGCTGTTCTCGGCAGGGCGGGCCGTGGGGACACATTCTGCCAGTCAGCATTGGCGATaGAGTAATCCTCCACTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SGAGWLFSAGRAVGTHSASQHWR*SNPPLH Trigger: GTGCAGTGGAGGATTACTTCATCGCCAATGCTGACT...GGCAGAATGTGTCCCCACGGCCCGCCCTGCCGAGAACAGCCATCCAGCGCCGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| CDS-3UTR CCA 90 bp | AGCGGCGCTGGATGGCTGTTCTCGGCAGGGCGGGCCGTGGGGACACATTCTGCCCTGTATCAAACTCAGTaGTCATCAGCTCCCCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: SGAGWLFSAGRAVGTHSALYQTQ*SSAPQE Trigger: TTCTTGGGGAGCTGATGACCACTGAGTTTGATACAG...GGCAGAATGTGTCCCCACGGCCCGCCCTGCCGAGAACAGCCATCCAGCGCCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| CDS-3UTR CCA 90 bp | CTCCAGCGGCGCTGGATGGCTGTTCTCGGCAGGGCGGGCCGTGGGGACACATTCTCTTTCTCCGGACAATaGTCCAACCGTCTTCAACTA | + |
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Preference number: 4 (lower is better) Translates to: LQRRWMAVLGRAGRGDTFSFSGQ*SNRLQL Trigger: TAGTTGAAGACGGTTGGACCATTGTCCGGAGAAAGA...GAATGTGTCCCCACGGCCCGCCCTGCCGAGAACAGCCATCCAGCGCCGCTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| CDS-3UTR CCA 90 bp | GTTCTGAGGGAGGCTAGGGTGGGGACATTGGGGAATGTAGAGATGTCTACATCTCACTCGGCCTTCTCCTaGCTGTGCACGCCCCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: VLREARVGTLGNVEMSTSHSAFS*LCTPPK Trigger: CTTCGGGGGCGTGCACAGCCAGGAGAAGGCCGAGTG...AGATGTAGACATCTCTACATTCCCCAATGTCCCCACCCTAGCCTCCCTCAGAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| CDS-3UTR GCA 90 bp | CCAAAGTCCCAGGCTACTAAGGGAGATGGGAGGGTACAGAAACTACTCTCTTGCGCCTTCTCCTGGCTGTaGACGCCCCCGAAGCCATTC | + |
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Preference number: 4 (lower is better) Translates to: PKSQATKGDGRVQKLLSCAFSWL*TPPKPF Trigger: GAATGGCTTCGGGGGCGTGCACAGCCAGGAGAAGGC...GCAAGAGAGTAGTTTCTGTACCCTCCCATCTCCCTTAGTAGCCTGGGACTTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR CAA 72 bp | GAGTTTCTGCCCCACACTCCAGCTGCCCATGTTCAATaGGGGGCTCCAGCCCACTCCCAATGCAGTCAATAC | + |
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Preference number: 4 (lower is better) Translates to: EFLPHTPAAHVQ*GAPAHSQCSQY Trigger: GTATTGACTGCATTGGGAGTGGGCTGGAGCCCCCAATTGAACATGGGCAGCTGGAGTGTGGGGCAGAAACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR CAA 72 bp | CTCTTCCTTAATAGTCTGGGTGTCTGGATCAGAGGGTaGAGGCTGTGGGCAGACCTCGTCAGTTGTGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LFLNSLGVWIRG*RLWADLVSCGP Trigger: GGGGCCACAACTGACGAGGTCTGCCCACAGCCTCAACCCTCTGATCCAGACACCCAGACTATTAAGGAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166010.2 |
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| CDS-3UTR GCA 90 bp | CTTTCCACAAATGTACCTGCCAGTTTTCCACAAGTCTGGTCTACAACCACACCCGCCTTCTCCTGGCTGTaGACGCCCCCGAAGCCATTC | + |
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Preference number: 4 (lower is better) Translates to: LSTNVPASFPQVWSTTTPAFSWL*TPPKPF Trigger: GAATGGCTTCGGGGGCGTGCACAGCCAGGAGAAGGC...GGGTGTGGTTGTAGACCAGACTTGTGGAAAACTGGCAGGTACATTTGTGGAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| CDS-3UTR CCA 90 bp | GTTAAGAGTCAGCAGCAGCCAAGCCTTGCTTTGTTTTATCTCCATGATGAAGGCCACTCGGCCTTCTCCTaGCTGTGCACGCCCCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: VKSQQQPSLALFYLHDEGHSAFS*LCTPPK Trigger: CTTCGGGGGCGTGCACAGCCAGGAGAAGGCCGAGTG...GCCTTCATCATGGAGATAAAACAAAGCAAGGCTTGGCTGCTGCTGACTCTTAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| CDS-3UTR CCA 90 bp | TCACAGAAACAGGCCTCGGTCGCTGCTGAGAACAGCGTCATCTGCAGCTTCCTGGGAAGTGGTGGAACATaGTCTGTAGCTGTTGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: SQKQASVAAENSVICSFLGSGGT*SVAVGS Trigger: TGAGCCAACAGCTACAGACCATGTTCCACCACTTCC...CAGGAAGCTGCAGATGACGCTGTTCTCAGCAGCGACCGAGGCCTGTTTCTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| CDS-3UTR CCA 90 bp | TCACAGAAACAGGCCTCGGTCGCTGCTGAGAACAGCGTCATCTGCAGCTTCCTGCCCTTCTGGAAGTGGTaGAACATGGTCTGTAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: SQKQASVAAENSVICSFLPFWKW*NMVCSC Trigger: ACAGCTACAGACCATGTTCCACCACTTCCAGAAGGG...CAGGAAGCTGCAGATGACGCTGTTCTCAGCAGCGACCGAGGCCTGTTTCTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| CDS-3UTR CCA 90 bp | GGGCTGCTCCTCTCCTTGTCCTTTGGGGGCAGGGTGAGCCTAGCAAAGGGGAAATCTTCCTTAATAGTCTaGGTGTCTGGATCAGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: GLLLSLSFGGRVSLAKGKSSLIV*VSGSEG Trigger: ACCCTCTGATCCAGACACCCAGACTATTAAGGAAGA...TTTCCCCTTTGCTAGGCTCACCCTGCCCCCAAAGGACAAGGAGAGGAGCAGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| CDS-3UTR CCA 90 bp | TCTCAAGGGTATTCAAACAGGGAGCATTCCCAGGAGGATGCAAATTCTGGGCAGGCCCCATCACCCTTCTaGAAGTGGTGGAACATGGTC | + |
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Preference number: 4 (lower is better) Translates to: SQGYSNREHSQEDANSGQAPSPF*KWWNMV Trigger: GACCATGTTCCACCACTTCCAGAAGGGTGATGGGGC...CTGCCCAGAATTTGCATCCTCCTGGGAATGCTCCCTGTTTGAATACCCTTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| CDS-3UTR CCA 90 bp | AACTTTCAGAGCACTGCTATGGTCCGTCCGTTTGTCCAAAGTCCCAGGCTACTAGCCCCATCACCCTTCTaGAAGTGGTGGAACATGGTC | + |
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Preference number: 4 (lower is better) Translates to: NFQSTAMVRPFVQSPRLLAPSPF*KWWNMV Trigger: GACCATGTTCCACCACTTCCAGAAGGGTGATGGGGC...TAGTAGCCTGGGACTTTGGACAAACGGACGGACCATAGCAGTGCTCTGAAAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| CDS-3UTR CCA 90 bp | CACACAAAGCCACCTAAGCTGGTACTTCAGCCCAGAGACAGAAGAACTCCAGCGAATAGTCTGGGTGTCTaGATCAGAGGGTTGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: HTKPPKLVLQPRDRRTPANSLGV*IRGLRL Trigger: CAGCCTCAACCCTCTGATCCAGACACCCAGACTATT...CGCTGGAGTTCTTCTGTCTCTGGGCTGAAGTACCAGCTTAGGTGGCTTTGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| CDS-3UTR CCA 90 bp | GTTGTTCTGAGGGAGGCTAGGGTGGGGACATTGGGGAATGTAGAGATGTCTACAGGAAGTGGTGGAACATaGTCTGTAGCTGTTGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: VVLREARVGTLGNVEMSTGSGGT*SVAVGS Trigger: TGAGCCAACAGCTACAGACCATGTTCCACCACTTCC...TGTAGACATCTCTACATTCCCCAATGTCCCCACCCTAGCCTCCCTCAGAACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| CDS-3UTR CCA 90 bp | CCAAAGTCCCAGGCTACTAAGGGAGATGGGAGGGTACAGAAACTACTCTCTTGCCCCTTCTGGAAGTGGTaGAACATGGTCTGTAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: PKSQATKGDGRVQKLLSCPFWKW*NMVCSC Trigger: ACAGCTACAGACCATGTTCCACCACTTCCAGAAGGG...GCAAGAGAGTAGTTTCTGTACCCTCCCATCTCCCTTAGTAGCCTGGGACTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR CAA 72 bp | GTTTTCCACAAGTCTGGTCTACAACCACACCCACACTaGTCAGCCGTCTTCATAGTCACTGCACCTAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: VFHKSGLQPHPH*SAVFIVTAPRR Trigger: CCTCCTAGGTGCAGTGACTATGAAGACGGCTGACAAGTGTGGGTGTGGTTGTAGACCAGACTTGTGGAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 ENSMUST00000166010.2 |
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| 3UTR CAA 72 bp | TTGGGGGCTCCAGCCCACTCCCAATGCAGTCAATACTaGAATTCCCATCAAGGGCACTTTCAATCCCGAATG | + |
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Preference number: 4 (lower is better) Translates to: LGAPAHSQCSQY*NSHQGHFQSRM Trigger: CATTCGGGATTGAAAGTGCCCTTGATGGGAATTCAAGTATTGACTGCATTGGGAGTGGGCTGGAGCCCCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| CDS-3UTR CCA 90 bp | GCTGTACATCTATGGAGCCCCTCAGGTGTGCATCCCACTCCTTCAGGTTTTTCCTCTTTCTCCGGACAATaGTCCAACCGTCTTCAACTA | + |
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Preference number: 4 (lower is better) Translates to: AVHLWSPSGVHPTPSGFSSFSGQ*SNRLQL Trigger: TAGTTGAAGACGGTTGGACCATTGTCCGGAGAAAGA...GGAAAAACCTGAAGGAGTGGGATGCACACCTGAGGGGCTCCATAGATGTACAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR CAA 72 bp | CTGTCCCCACTGAGATCTGCACACCCCTTATACTTGTaGTTAAGAGTCAGCAGCAGCCAAGCCTTGCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: LSPLRSAHPLYL*LRVSSSQALLC Trigger: ACAAAGCAAGGCTTGGCTGCTGCTGACTCTTAACAACAAGTATAAGGGGTGTGCAGATCTCAGTGGGGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR CAA 72 bp | TCACTGTCCCCACTGAGATCTGCACACCCCTTATACTaGTTGTTAAGAGTCAGCAGCAGCCAAGCCTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: SLSPLRSAHPLY*LLRVSSSQALL Trigger: AAGCAAGGCTTGGCTGCTGCTGACTCTTAACAACAAGTATAAGGGGTGTGCAGATCTCAGTGGGGACAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| CDS-3UTR CCA 90 bp | TCAAACTCTCAAGGGTATTCAAACAGGGAGCATTCCCAGGAGGATGCAAATTCTATGGTCTGTAGCTGTTaGCTCACCTGGGGCAGACTC | + |
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Preference number: 4 (lower is better) Translates to: SNSQGYSNREHSQEDANSMVCSC*LTWGRL Trigger: GAGTCTGCCCCAGGTGAGCCAACAGCTACAGACCAT...AGAATTTGCATCCTCCTGGGAATGCTCCCTGTTTGAATACCCTTGAGAGTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| CDS-3UTR CCA 90 bp | TGCAGTCAATACTTGAATTCCCATCAAGGGCACTTTCAATCCCGAATGCTGGGTAATAGTCTGGGTGTCTaGATCAGAGGGTTGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: CSQYLNSHQGHFQSRMLGNSLGV*IRGLRL Trigger: CAGCCTCAACCCTCTGATCCAGACACCCAGACTATT...ACCCAGCATTCGGGATTGAAAGTGCCCTTGATGGGAATTCAAGTATTGACTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| CDS-3UTR CCA 90 bp | AACTTTCAGAGCACTGCTATGGTCCGTCCGTTTGTCCAAAGTCCCAGGCTACTATCTTCCTTAATAGTCTaGGTGTCTGGATCAGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: NFQSTAMVRPFVQSPRLLSSLIV*VSGSEG Trigger: ACCCTCTGATCCAGACACCCAGACTATTAAGGAAGA...TAGTAGCCTGGGACTTTGGACAAACGGACGGACCATAGCAGTGCTCTGAAAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| CDS-3UTR CCA 90 bp | TGCAGTCAATACTTGAATTCCCATCAAGGGCACTTTCAATCCCGAATGCTGGGTCTGTATCAAACTCAGTaGTCATCAGCTCCCCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: CSQYLNSHQGHFQSRMLGLYQTQ*SSAPQE Trigger: TTCTTGGGGAGCTGATGACCACTGAGTTTGATACAG...ACCCAGCATTCGGGATTGAAAGTGCCCTTGATGGGAATTCAAGTATTGACTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR CAA 72 bp | GGAACTAGCCAAAGGACTGAATCTATAATAGTTGATTaGGGCATGGGAGGAGATAGCCATGTAAACCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: GTSQRTESIIVD*GMGGDSHVNQP Trigger: AGGCTGGTTTACATGGCTATCTCCTCCCATGCCCAAATCAACTATTATAGATTCAGTCCTTTGGCTAGTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR CAA 72 bp | TCTGTGCTCTTCTCACAAGTCCTGCATTTTCATCTATaGTTAGGATCGAGACAGATGGTGTTAGCCACCTAC | + |
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Preference number: 4 (lower is better) Translates to: SVLFSQVLHFHL*LGSRQMVLATY Trigger: GTAGGTGGCTAACACCATCTGTCTCGATCCTAACAATAGATGAAAATGCAGGACTTGTGAGAAGAGCACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| 3UTR CAA 72 bp | CAGAAACTACTCTCTTGCCAAATTTTGAAGCTCAGCTaGCAGAAAGCTGATTCCAAGGTTAAATCATGGATT | + |
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Preference number: 4 (lower is better) Translates to: QKLLSCQILKLS*QKADSKVKSWI Trigger: AATCCATGATTTAACCTTGGAATCAGCTTTCTGCAAGCTGAGCTTCAAAATTTGGCAAGAGAGTAGTTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 ENSMUST00000166010.2 |
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| CDS-3UTR CAA 90 bp | CTCCAGCGGCGCTGGATGGCTGTTCTCGGCAGGGCGGGCCGTGGGGACACATTCGTCTGGATCAGAGGGTaGAGGCTGTGGGCAGACCTC | + |
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Preference number: 5 (lower is better) Translates to: LQRRWMAVLGRAGRGDTFVWIRG*RLWADL Trigger: GAGGTCTGCCCACAGCCTCAACCCTCTGATCCAGAC...GAATGTGTCCCCACGGCCCGCCCTGCCGAGAACAGCCATCCAGCGCCGCTGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| CDS-3UTR CAA 90 bp | CTCCAGCGGCGCTGGATGGCTGTTCTCGGCAGGGCGGGCCGTGGGGACACATTCGCCACATCAGTTTCTTaGGCTGTCATAAGTGGGGTA | + |
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Preference number: 5 (lower is better) Translates to: LQRRWMAVLGRAGRGDTFATSVS*AVISGV Trigger: TACCCCACTTATGACAGCCAAAGAAACTGATGTGGC...GAATGTGTCCCCACGGCCCGCCCTGCCGAGAACAGCCATCCAGCGCCGCTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| CDS-3UTR CAA 90 bp | AACTTTCAGAGCACTGCTATGGTCCGTCCGTTTGTCCAAAGTCCCAGGCTACTAGTCTGGATCAGAGGGTaGAGGCTGTGGGCAGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: NFQSTAMVRPFVQSPRLLVWIRG*RLWADL Trigger: GAGGTCTGCCCACAGCCTCAACCCTCTGATCCAGAC...TAGTAGCCTGGGACTTTGGACAAACGGACGGACCATAGCAGTGCTCTGAAAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| CDS-3UTR CAA 90 bp | AACTTTCAGAGCACTGCTATGGTCCGTCCGTTTGTCCAAAGTCCCAGGCTACTAGCCACATCAGTTTCTTaGGCTGTCATAAGTGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: NFQSTAMVRPFVQSPRLLATSVS*AVISGV Trigger: TACCCCACTTATGACAGCCAAAGAAACTGATGTGGC...TAGTAGCCTGGGACTTTGGACAAACGGACGGACCATAGCAGTGCTCTGAAAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| CDS CCA 72 bp | TCCTCCACTGCACCCCCTAGCCACTCGGCCTTCTCCTaGCTGTGCACGCCCCCGAAGCCATTCTCCACAGCG | + |
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Preference number: 6 (lower is better) Translates to: SSTAPPSHSAFS*LCTPPKPFSTA Trigger: CGCTGTGGAGAATGGCTTCGGGGGCGTGCACAGCCAGGAGAAGGCCGAGTGGCTAGGGGGTGCAGTGGAGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| CDS GCA 72 bp | ACTGCACCCCCTAGCCACTCGGCCTTCTCCTGGCTGTaGACGCCCCCGAAGCCATTCTCCACAGCGATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: TAPPSHSAFSWL*TPPKPFSTAIC Trigger: ACAGATCGCTGTGGAGAATGGCTTCGGGGGCGTGCACAGCCAGGAGAAGGCCGAGTGGCTAGGGGGTGCAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| CDS TCA 72 bp | CTTCTATCTCTTCCAGCTCCAAGTCAGCATTGGCGATaGAGTAATCCTCCACTGCACCCCCTAGCCACTCGG | + |
|
Preference number: 6 (lower is better) Translates to: LLSLPAPSQHWR*SNPPLHPLATR Trigger: CCGAGTGGCTAGGGGGTGCAGTGGAGGATTACTTCATCGCCAATGCTGACTTGGAGCTGGAAGAGATAGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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| CDS CCA 72 bp | GCAGACTCCCATCTTCCACAACTGTATCAAACTCAGTaGTCATCAGCTCCCCAAGAAAATCTTCTATCTCTT | + |
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Preference number: 6 (lower is better) Translates to: ADSHLPQLYQTQ*SSAPQENLLSL Trigger: AAGAGATAGAAGATTTTCTTGGGGAGCTGATGACCACTGAGTTTGATACAGTTGTGGAAGATGGGAGTCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026295.10 ENSMUST00000112683.9 |
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