Pregenerated sensors for TSR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038335Ensembl transcript IDs: ENSMUST00000045807.14, ENSMUST00000128230.8, ENSMUST00000153316.8, ENSMUST00000155702.8
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTTTCTGTGCCAACAGTATGCAACCCAGCTGGTGTGGGGGAGAATaGAACTGCTCATTGAGCCGACTGCTGGCGTGGCACTGGCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: PFCANSMQPSWCGGE*NCSLSRLLAWHWLQ Trigger: CTGCAGCCAGTGCCACGCCAGCAGTCGGCTCAATGAGCAGTTTCATTCTCCCCCACACCAGCTGGGTTGCATACTGTTGGCACAGAAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
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| 3UTR CCA 90 bp | AACCCTTGCTCCTTTCTGTGCCAACAGTATGCAACCCAGCTGGTGTaGGGGAGAATGAAACTGCTCATTGAGCCGACTGCTGGCGTGGCA | + |
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Preference number: 1 (lower is better) Translates to: NPCSFLCQQYATQLV*GRMKLLIEPTAGVA Trigger: TGCCACGCCAGCAGTCGGCTCAATGAGCAGTTTCATTCTCCCCCACACCAGCTGGGTTGCATACTGTTGGCACAGAAAGGAGCAAGGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
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| 3UTR GCA 90 bp | TGTAACCTACTAGACTCCGGCTCCGTTTCTTGTTTCATTAACCCTTaGTCCTTTCTGTGCCAACAGTATGCAACCCAGCTGGTGTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: CNLLDSGSVSCFINP*SFLCQQYATQLVWG Trigger: CCCCCACACCAGCTGGGTTGCATACTGTTGGCACAGAAAGGAGCAAGGGTTAATGAAACAAGAAACGGAGCCGGAGTCTAGTAGGTTACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
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| 3UTR GCA 90 bp | CCTAGTGTGAAGGTATACGCTGCTGAGCCCTCGAATGCAGATGACTaGTACCAGTCTAAACTGAAAGGAGAACTGACCCCCAATCTTCAT | + |
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Preference number: 1 (lower is better) Translates to: PSVKVYAAEPSNADD*YQSKLKGELTPNLH Trigger: ATGAAGATTGGGGGTCAGTTCTCCTTTCAGTTTAGACTGGTAGCAGTCATCTGCATTCGAGGGCTCAGCAGCGTATACCTTCACACTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
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| 3UTR TCA 90 bp | AGAACCCAACTGAGTCTCTTACTCCATGTCTACTTCAGACACTGTTaGAGAGATGTCACTTTTAACCCAAGGTACTGGCTCTGGTACATA | + |
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Preference number: 1 (lower is better) Translates to: RTQLSLLLHVYFRHC*RDVTFNPRYWLWYI Trigger: TATGTACCAGAGCCAGTACCTTGGGTTAAAAGTGACATCTCTTCAACAGTGTCTGAAGTAGACATGGAGTAAGAGACTCAGTTGGGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128230.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGATGCAGGAGGGAACGTGATTGGCGCAAACACTGTCACCACGAAGGCAGCAAGAGCACAAGCTGCCTaGTCACAACCCAGACTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: TDAGGNVIGANTVTTKAARAQAA*SQPRLQ Trigger: TTGGAGTCTGGGTTGTGACCAGGCAGCTTGTGCTCT...TGCTGCCTTCGTGGTGACAGTGTTTGCGCCAATCACGTTCCCTCCTGCATCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128230.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCCCAATCTTCATCCTCCAGAAACCATAGCAGATGGTGTCAAATCCAGCATTCTGCTGGCGTGGCACTaGCTGCAGTGCTGTCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: TPNLHPPETIADGVKSSILLAWH*LQCCLS Trigger: GCTGAGACAGCACTGCAGCCAGTGCCACGCCAGCAG...AATGCTGGATTTGACACCATCTGCTATGGTTTCTGGAGGATGAAGATTGGGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
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| 3UTR-3UTR CCA 90 bp | GTAAGTCATCTGCCTCATCCAGCTCTTCCTCAGTGGGCCAGGTCTGCTCTCCTTAGAAGCATAAAACTCTaGGTGCTTCCCCGTTCACTC | + |
|
Preference number: 2 (lower is better) Translates to: VSHLPHPALPQWARSALLRSIKL*VLPRSL Trigger: GAGTGAACGGGGAAGCACCCAGAGTTTTATGCTTCT...AAGGAGAGCAGACCTGGCCCACTGAGGAAGAGCTGGATGAGGCAGATGACTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155702.8 |
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| 3UTR-3UTR GCA 90 bp | GCGCCTGAACCCACAGTGGAAGATCAATTCTTCTTTCGCCTTCACAGGTTCCGTAGCATTCCTGATTCCTaGTGCGTGTCTAGGAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: APEPTVEDQFFFRLHRFRSIPDS*CVSRSR Trigger: TCTGCTCCTAGACACGCAGCAGGAATCAGGAATGCT...ACGGAACCTGTGAAGGCGAAAGAAGAATTGATCTTCCACTGTGGGTTCAGGCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128230.8 |
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| 3UTR-3UTR GCA 90 bp | GTAAGTCATCTGCCTCATCCAGCTCTTCCTCAGTGGGCCAGGTCTGCTCTCCTTCTGAGATTTTCAAGGTaGCCACTAAGTCACTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: VSHLPHPALPQWARSALLLRFSR*PLSHSP Trigger: AGGAGAGTGACTTAGTGGGCACCTTGAAAATCTCAG...AAGGAGAGCAGACCTGGCCCACTGAGGAAGAGCTGGATGAGGCAGATGACTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128230.8 ENSMUST00000155702.8 |
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| 3UTR-3UTR GCA 90 bp | TTACCACTCTGGACCGTTGCTTCAGTAAGTCATCTGCCTCATCCAGCTCTTCCTTCAGTGGGCCAGGTCTaGTCTCCTTCCATAGGATCT | + |
|
Preference number: 2 (lower is better) Translates to: LPLWTVASVSHLPHPALPSVGQV*SPSIGS Trigger: AGATCCTATGGAAGGAGAGCAGACCTGGCCCACTGA...AGGAAGAGCTGGATGAGGCAGATGACTTACTGAAGCAACGGTCCAGAGTGGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128230.8 ENSMUST00000155702.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCTGAGCAAAAAGGCAAGACAGGCAATAATCCCCCGTACTGTCCCAGCCTTCCCAACACTGGAGTTTTaGTTGGTTGCAGTAGAGACA | + |
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Preference number: 2 (lower is better) Translates to: ALSKKARQAIIPRTVPAFPTLEF*LVAVET Trigger: TGTCTCTACTGCAACCAACCAAAACTCCAGTGTTGG...GAAGGCTGGGACAGTACGGGGGATTATTGCCTGTCTTGCCTTTTTGCTCAGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000128230.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCATCACTTTCATCACCTTCATCCAGAATCCACTCAGCCTGGTAACTGGATGTGTAAAGACTCCTGGTaGTCAGGGTCTGCCTTCATC | + |
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Preference number: 2 (lower is better) Translates to: PHHFHHLHPESTQPGNWMCKDSW*SGSAFI Trigger: GATGAAGGCAGACCCTGATCACCAGGAGTCTTTACA...CATCCAGTTACCAGGCTGAGTGGATTCTGGATGAAGGTGATGAAAGTGATGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128230.8 ENSMUST00000155702.8 |
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| 3UTR-3UTR GCA 90 bp | ACCCCCAATCTTCATCCTCCAGAAACCATAGCAGATGGTGTCAAATCCAGCATTTCTGTGCCAACAGTATaGAACCCAGCTGGTGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: TPNLHPPETIADGVKSSISVPTV*NPAGVG Trigger: CCCCACACCAGCTGGGTTGCATACTGTTGGCACAGA...AATGCTGGATTTGACACCATCTGCTATGGTTTCTGGAGGATGAAGATTGGGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
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| 3UTR-3UTR GCA 90 bp | CCCCATCACTTTCATCACCTTCATCCAGAATCCACTCAGCCTGGTAACTGGATGAGCATTCCTGATTCCTaGTGCGTGTCTAGGAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: PHHFHHLHPESTQPGNWMSIPDS*CVSRSR Trigger: TCTGCTCCTAGACACGCAGCAGGAATCAGGAATGCT...CATCCAGTTACCAGGCTGAGTGGATTCTGGATGAAGGTGATGAAAGTGATGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128230.8 ENSMUST00000155702.8 |
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| 3UTR-3UTR CCA 90 bp | CAACAGTATGCAACCCAGCTGGTGTGGGGGAGAATGAAACTGCTCATTGAGCCGCCAACACTGGAGTTTTaGTTGGTTGCAGTAGAGACA | + |
|
Preference number: 2 (lower is better) Translates to: QQYATQLVWGRMKLLIEPPTLEF*LVAVET Trigger: TGTCTCTACTGCAACCAACCAAAACTCCAGTGTTGG...CGGCTCAATGAGCAGTTTCATTCTCCCCCACACCAGCTGGGTTGCATACTGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
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| 3UTR-3UTR GCA 90 bp | GCGCCTGAACCCACAGTGGAAGATCAATTCTTCTTTCGCCTTCACAGGTTCCGTGGAGTTTTGGTTGGTTaGAGTAGAGACAGAACCCAA | + |
|
Preference number: 2 (lower is better) Translates to: APEPTVEDQFFFRLHRFRGVLVG*SRDRTQ Trigger: TTGGGTTCTGTCTCTACTGCAACCAACCAAAACTCC...ACGGAACCTGTGAAGGCGAAAGAAGAATTGATCTTCCACTGTGGGTTCAGGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128230.8 |
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| 3UTR-3UTR GCA 90 bp | GTAAGTCATCTGCCTCATCCAGCTCTTCCTCAGTGGGCCAGGTCTGCTCTCCTTAACACAAACCTCCATTaGCATGTTTGGTTTCTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: VSHLPHPALPQWARSALLNTNLH*HVWFLL Trigger: CAGAAGAAACCAAACATGGCAATGGAGGTTTGTGTT...AAGGAGAGCAGACCTGGCCCACTGAGGAAGAGCTGGATGAGGCAGATGACTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128230.8 ENSMUST00000155702.8 |
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| 3UTR-3UTR GCA 90 bp | TTACCACTCTGGACCGTTGCTTCAGTAAGTCATCTGCCTCATCCAGCTCTTCCTCAGATCCCCTGGTCTTaGATATGTGAAAAACCATCG | + |
|
Preference number: 2 (lower is better) Translates to: LPLWTVASVSHLPHPALPQIPWS*ICEKPS Trigger: CGATGGTTTTTCACATATGCAAGACCAGGGGATCTG...AGGAAGAGCTGGATGAGGCAGATGACTTACTGAAGCAACGGTCCAGAGTGGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155702.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGATGTTCCTTTAGGGACCTTCTTTACCACTCTGGACCGTTGCTTCAGTAAGCAGCTAGTGTATAGGTaGGAAGGCCCTGAGCAAAAA | + |
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Preference number: 2 (lower is better) Translates to: LDVPLGTFFTTLDRCFSKQLVYR*EGPEQK Trigger: TTTTTGCTCAGGGCCTTCCCACCTATACACTAGCTG...CTTACTGAAGCAACGGTCCAGAGTGGTAAAGAAGGTCCCTAAAGGAACATCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128230.8 ENSMUST00000155702.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTTAGGGACCTTCTTTACCACTCTGGACCGTTGCTTCAGTAAGTCATCTGCCCCTTCTTTACCACTCTaGACCGTTGCTTCAGTAAGT | + |
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Preference number: 2 (lower is better) Translates to: PLGTFFTTLDRCFSKSSAPSLPL*TVASVS Trigger: ACTTACTGAAGCAACGGTCCAGAGTGGTAAAGAAGG...GGCAGATGACTTACTGAAGCAACGGTCCAGAGTGGTAAAGAAGGTCCCTAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128230.8 ENSMUST00000155702.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTTCCACAGGCTTAAACCACATCACATCCTCTCTGTTGAAGAACATGTACCGATTCCTGATTCCTGCTaGGTGTCTAGGAGCAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: QFHRLKPHHILSVEEHVPIPDSC*VSRSRS Trigger: ACTTCTGCTCCTAGACACGCAGCAGGAATCAGGAAT...CGGTACATGTTCTTCAACAGAGAGGATGTGATGTGGTTTAAGCCTGTGGAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128230.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCAAATGTCTACTTCATTTTTCGAATGTAACCTACTAGACTCCGGCTCCGTTAGAGCACAAGCTGCCTaGTCACAACCCAGACTCCAA | + |
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Preference number: 2 (lower is better) Translates to: TQMSTSFFECNLLDSGSVRAQAA*SQPRLQ Trigger: TTGGAGTCTGGGTTGTGACCAGGCAGCTTGTGCTCT...AACGGAGCCGGAGTCTAGTAGGTTACATTCGAAAAATGAAGTAGACATTTGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
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| 3UTR-3UTR TCA 90 bp | CCTTTAGGGACCTTCTTTACCACTCTGGACCGTTGCTTCAGTAAGTCATCTGCCACAGGAGCATCTATTTaGTTCATTTGGAAATCACCG | + |
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Preference number: 2 (lower is better) Translates to: PLGTFFTTLDRCFSKSSATGASI*FIWKSP Trigger: CGGTGATTTCCAAATGAATCAAATAGATGCTCCTGT...GGCAGATGACTTACTGAAGCAACGGTCCAGAGTGGTAAAGAAGGTCCCTAAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128230.8 ENSMUST00000155702.8 |
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| 3UTR-3UTR TCA 90 bp | AGCATAATCTCTAGGAAGGTTTTCTTTAGGATCCCAAGGAGATGTCCGGAAACTTCACCACTCCCATCCTaGGACTCCTCTTCCATGAAA | + |
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Preference number: 2 (lower is better) Translates to: SIISRKVFFRIPRRCPETSPLPS*DSSSMK Trigger: TTTCATGGAAGAGGAGTCTCAGGATGGGAGTGGTGA...AGTTTCCGGACATCTCCTTGGGATCCTAAAGAAAACCTTCCTAGAGATTATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128230.8 ENSMUST00000155702.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTTAGGGACCTTCTTTACCACTCTGGACCGTTGCTTCAGTAAGTCATCTGCCCTGGTCTTGCATATGTaGAAAACCATCGATGTTTCA | + |
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Preference number: 2 (lower is better) Translates to: PLGTFFTTLDRCFSKSSALVLHM*KTIDVS Trigger: TGAAACATCGATGGTTTTTCACATATGCAAGACCAG...GGCAGATGACTTACTGAAGCAACGGTCCAGAGTGGTAAAGAAGGTCCCTAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155702.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGACAGTAGATCACATACTTATCACAACAAACCCAAATGTCTACTTCATTTTCTAACCTCCCTGAACTaGGTGGGGCAGGCTGAACGG | + |
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Preference number: 2 (lower is better) Translates to: PDSRSHTYHNKPKCLLHFLTSLN*VGQAER Trigger: CCGTTCAGCCTGCCCCACCCAGTTCAGGGAGGTTAG...AAAATGAAGTAGACATTTGGGTTTGTTGTGATAAGTATGTGATCTACTGTCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
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| 3UTR-3UTR CCA 90 bp | TTGGTTGGTTGCAGTAGAGACAGAACCCAACTGAGTCTCTTACTCCATGTCTACTTTAACCCAAGGTACTaGCTCTGGTACATATGGGTC | + |
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Preference number: 2 (lower is better) Translates to: LVGCSRDRTQLSLLLHVYFNPRY*LWYIWV Trigger: GACCCATATGTACCAGAGCCAGTACCTTGGGTTAAA...GTAGACATGGAGTAAGAGACTCAGTTGGGTTCTGTCTCTACTGCAACCAACCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128230.8 |
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| 3UTR CAA 90 bp | CATCCTCCAGAAACCATAGCAGATGGTGTCAAATCCAGCATTGGCTaGAATACCTGGCCTATTATAAGAGACCTTGTGGATGATGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: HPPETIADGVKSSIG*NTWPIIRDLVDDVF Trigger: GAAGACATCATCCACAAGGTCTCTTATAATAGGCCAGGTATTCAAGCCAATGCTGGATTTGACACCATCTGCTATGGTTTCTGGAGGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
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| 3UTR-3UTR CCA 90 bp | GCAGATGACTGCTACCAGTCTAAACTGAAAGGAGAACTGACCCCCAATCTTCATTGTCAAATCCAGCATTaGCTTGAATACCTGGCCTAT | + |
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Preference number: 2 (lower is better) Translates to: ADDCYQSKLKGELTPNLHCQIQH*LEYLAY Trigger: ATAGGCCAGGTATTCAAGCCAATGCTGGATTTGACA...ATGAAGATTGGGGGTCAGTTCTCCTTTCAGTTTAGACTGGTAGCAGTCATCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
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| 3UTR-3UTR GCA 90 bp | ACCCAAATGTCTACTTCATTTTTCGAATGTAACCTACTAGACTCCGGCTCCGTTGGAGTTTTGGTTGGTTaGAGTAGAGACAGAACCCAA | + |
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Preference number: 2 (lower is better) Translates to: TQMSTSFFECNLLDSGSVGVLVG*SRDRTQ Trigger: TTGGGTTCTGTCTCTACTGCAACCAACCAAAACTCC...AACGGAGCCGGAGTCTAGTAGGTTACATTCGAAAAATGAAGTAGACATTTGGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
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| 3UTR-3UTR CCA 90 bp | TTCGTGTTGTATATCATCATATTCACCACCTTCCCCATCACTTTCATCACCTTCCAGCTAGTGTATAGGTaGGAAGGCCCTGAGCAAAAA | + |
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Preference number: 2 (lower is better) Translates to: FVLYIIIFTTFPITFITFQLVYR*EGPEQK Trigger: TTTTTGCTCAGGGCCTTCCCACCTATACACTAGCTG...GAAGGTGATGAAAGTGATGGGGAAGGTGGTGAATATGATGATATACAACACGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128230.8 ENSMUST00000155702.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCATCACTTTCATCACCTTCATCCAGAATCCACTCAGCCTGGTAACTGGATGATGTTTGGTTTCTTCTaGGATTTAATCACTCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: PHHFHHLHPESTQPGNWMMFGFF*DLITLG Trigger: TCCTAGAGTGATTAAATCCCAGAAGAAACCAAACAT...CATCCAGTTACCAGGCTGAGTGGATTCTGGATGAAGGTGATGAAAGTGATGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128230.8 ENSMUST00000155702.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGTTGGTTGCAGTAGAGACAGAACCCAACTGAGTCTCTTACTCCATGTCTACGGTCATAAGTCCACTTaGGAAATACTCGCTTATAGA | + |
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Preference number: 2 (lower is better) Translates to: LVGCSRDRTQLSLLLHVYGHKST*EILAYR Trigger: TCTATAAGCGAGTATTTCCCAAGTGGACTTATGACC...GTAGACATGGAGTAAGAGACTCAGTTGGGTTCTGTCTCTACTGCAACCAACCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128230.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGATGTTCCTTTAGGGACCTTCTTTACCACTCTGGACCGTTGCTTCAGTAAGATGTTTGGTTTCTTCTaGGATTTAATCACTCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: LDVPLGTFFTTLDRCFSKMFGFF*DLITLG Trigger: TCCTAGAGTGATTAAATCCCAGAAGAAACCAAACAT...CTTACTGAAGCAACGGTCCAGAGTGGTAAAGAAGGTCCCTAAAGGAACATCCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128230.8 ENSMUST00000155702.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGACAGTAGATCACATACTTATCACAACAAACCCAAATGTCTACTTCATTTTCCTTGCTCCTTTCTGTaGCAACAGTATGCAACCCAG | + |
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Preference number: 2 (lower is better) Translates to: PDSRSHTYHNKPKCLLHFPCSFL*QQYATQ Trigger: CTGGGTTGCATACTGTTGGCACAGAAAGGAGCAAGG...AAAATGAAGTAGACATTTGGGTTTGTTGTGATAAGTATGTGATCTACTGTCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
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| 3UTR-3UTR CCA 90 bp | ACAACTTTTATTAAAGTGCTTCAAGGTCTTGTTTCCATTCTGATCACCAAGGGTTACTTAGCAGAGACATaGACAACTGAAATACAGAGC | + |
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Preference number: 2 (lower is better) Translates to: TTFIKVLQGLVSILITKGYLAET*TTEIQS Trigger: GCTCTGTATTTCAGTTGTCCATGTCTCTGCTAAGTA...ACCCTTGGTGATCAGAATGGAAACAAGACCTTGAAGCACTTTAATAAAAGTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
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| 3UTR TCA 72 bp | AACCCAGCTGGTGTGGGGGAGAATGAAACTGCTCATTaGGCCGACTGCTGGCGTGGCACTGGCTGCAGTGCT | + |
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Preference number: 3 (lower is better) Translates to: NPAGVGENETAH*ADCWRGTGCSA Trigger: AGCACTGCAGCCAGTGCCACGCCAGCAGTCGGCTCAATGAGCAGTTTCATTCTCCCCCACACCAGCTGGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
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| 3UTR TCA 72 bp | GCCAACAGTATGCAACCCAGCTGGTGTGGGGGAGAATaGAACTGCTCATTGAGCCGACTGCTGGCGTGGCAC | + |
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Preference number: 3 (lower is better) Translates to: ANSMQPSWCGGE*NCSLSRLLAWH Trigger: GTGCCACGCCAGCAGTCGGCTCAATGAGCAGTTTCATTCTCCCCCACACCAGCTGGGTTGCATACTGTTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
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| 3UTR-3UTR CAA 90 bp | TTGGTTGGTTGCAGTAGAGACAGAACCCAACTGAGTCTCTTACTCCATGTCTACCCCCGGCGGCCCCACTaGGTTCTCAGTTCCACAGGC | + |
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Preference number: 3 (lower is better) Translates to: LVGCSRDRTQLSLLLHVYPRRPH*VLSSTG Trigger: GCCTGTGGAACTGAGAACCAAGTGGGGCCGCCGGGG...GTAGACATGGAGTAAGAGACTCAGTTGGGTTCTGTCTCTACTGCAACCAACCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128230.8 |
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| 3UTR TCA 72 bp | TGTAGACCTAACCTCCCTGAACTGGGTGGGGCAGGCTaGACGGCCAGCTCCTTACCAGACGGTTTCTGTTTA | + |
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Preference number: 3 (lower is better) Translates to: CRPNLPELGGAG*TASSLPDGFCL Trigger: TAAACAGAAACCGTCTGGTAAGGAGCTGGCCGTTCAGCCTGCCCCACCCAGTTCAGGGAGGTTAGGTCTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
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| 3UTR GCA 72 bp | TCATTGAGCCGACTGCTGGCGTGGCACTGGCTGCAGTaGTGTCTCAGCATTTCCAAACAGTCTCTCCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: SLSRLLAWHWLQ*CLSISKQSLQK Trigger: CTTCTGGAGAGACTGTTTGGAAATGCTGAGACAGCACTGCAGCCAGTGCCACGCCAGCAGTCGGCTCAATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
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| 3UTR GCA 72 bp | TCTGCCTCATCCAGCTCTTCCTCAGTGGGCCAGGTCTaGTCTCCTTCCATAGGATCTGGAATAGCCTCTGTT | + |
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Preference number: 3 (lower is better) Translates to: SASSSSSSVGQV*SPSIGSGIASV Trigger: AACAGAGGCTATTCCAGATCCTATGGAAGGAGAGCAGACCTGGCCCACTGAGGAAGAGCTGGATGAGGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128230.8 ENSMUST00000155702.8 |
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| 3UTR CCA 72 bp | TCCTTTCTGTGCCAACAGTATGCAACCCAGCTGGTGTaGGGGAGAATGAAACTGCTCATTGAGCCGACTGCT | + |
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Preference number: 3 (lower is better) Translates to: SFLCQQYATQLV*GRMKLLIEPTA Trigger: AGCAGTCGGCTCAATGAGCAGTTTCATTCTCCCCCACACCAGCTGGGTTGCATACTGTTGGCACAGAAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
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| 3UTR GCA 72 bp | AAGGTATACGCTGCTGAGCCCTCGAATGCAGATGACTaGTACCAGTCTAAACTGAAAGGAGAACTGACCCCC | + |
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Preference number: 3 (lower is better) Translates to: KVYAAEPSNADD*YQSKLKGELTP Trigger: GGGGGTCAGTTCTCCTTTCAGTTTAGACTGGTAGCAGTCATCTGCATTCGAGGGCTCAGCAGCGTATACCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
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| 3UTR GCA 72 bp | CTAGACTCCGGCTCCGTTTCTTGTTTCATTAACCCTTaGTCCTTTCTGTGCCAACAGTATGCAACCCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LDSGSVSCFINP*SFLCQQYATQL Trigger: CAGCTGGGTTGCATACTGTTGGCACAGAAAGGAGCAAGGGTTAATGAAACAAGAAACGGAGCCGGAGTCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| 3UTR CCA 72 bp | CTCTCCAGAAGTAAAGAACGTCTGCATTGTACTCAGTaGGGGGAATGTAGACCTAACCTCCCTGAACTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: LSRSKERLHCTQ*GECRPNLPELG Trigger: ACCCAGTTCAGGGAGGTTAGGTCTACATTCCCCCCACTGAGTACAATGCAGACGTTCTTTACTTCTGGAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| 3UTR CCA 72 bp | CGATGTTTCAAGCTAGGGCACAGAAGCATAAAACTCTaGGTGCTTCCCCGTTCACTCAAATACACCGTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: RCFKLGHRSIKL*VLPRSLKYTVP Trigger: GGGAACGGTGTATTTGAGTGAACGGGGAAGCACCCAGAGTTTTATGCTTCTGTGCCCTAGCTTGAAACATCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155702.8 |
||
| 3UTR GCA 72 bp | CACAACCCAGACTCCAACACTGGAGTTTTGGTTGGTTaGAGTAGAGACAGAACCCAACTGAGTCTCTTACTC | + |
|
Preference number: 3 (lower is better) Translates to: HNPDSNTGVLVG*SRDRTQLSLLL Trigger: GAGTAAGAGACTCAGTTGGGTTCTGTCTCTACTGCAACCAACCAAAACTCCAGTGTTGGAGTCTGGGTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128230.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCAGAAACCATAGCAGATGGTGTCAAATCCAGCATTGGCTTGAATACCTGGACACTGGAGTTTTGGTaGGTTGCAGTAGAGACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: PPETIADGVKSSIGLNTWTLEFW*VAVETE Trigger: TTCTGTCTCTACTGCAACCAACCAAAACTCCAGTGT...CCAGGTATTCAAGCCAATGCTGGATTTGACACCATCTGCTATGGTTTCTGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| 3UTR-3UTR CAA 90 bp | CAGTTCCACAGGCTTAAACCACATCACATCCTCTCTGTTGAAGAACATGTACCGTCTAGGAGCAGAAGTTaGTCTTCAGGGAAGCGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: QFHRLKPHHILSVEEHVPSRSRS*SSGKRF Trigger: GAAACGCTTCCCTGAAGACAAACTTCTGCTCCTAGA...CGGTACATGTTCTTCAACAGAGAGGATGTGATGTGGTTTAAGCCTGTGGAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128230.8 |
||
| 3UTR-3UTR CAA 90 bp | TTACCACTCTGGACCGTTGCTTCAGTAAGTCATCTGCCTCATCCAGCTCTTCCTATCTATTTGATTCATTaGGAAATCACCGTGTCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: LPLWTVASVSHLPHPALPIYLIH*EITVSN Trigger: GTTGGACACGGTGATTTCCAAATGAATCAAATAGAT...AGGAAGAGCTGGATGAGGCAGATGACTTACTGAAGCAACGGTCCAGAGTGGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128230.8 ENSMUST00000155702.8 |
||
| 3UTR TCA 72 bp | GAGTTTTGGTTGGTTGCAGTAGAGACAGAACCCAACTaGGTCTCTTACTCCATGTCTACTTCAGACACTGTT | + |
|
Preference number: 3 (lower is better) Translates to: EFWLVAVETEPN*VSYSMSTSDTV Trigger: AACAGTGTCTGAAGTAGACATGGAGTAAGAGACTCAGTTGGGTTCTGTCTCTACTGCAACCAACCAAAACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128230.8 |
||
| 3UTR CCA 72 bp | GCAGATGGTGTCAAATCCAGCATTGGCTTGAATACCTaGCCTATTATAAGAGACCTTGTGGATGATGTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: ADGVKSSIGLNT*PIIRDLVDDVF Trigger: GAAGACATCATCCACAAGGTCTCTTATAATAGGCCAGGTATTCAAGCCAATGCTGGATTTGACACCATCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| 3UTR GCA 72 bp | CATGTCAGGAGCAGCATCTGTAACACAAACCTCCATTaGCATGTTTGGTTTCTTCTGGGATTTAATCACTCT | + |
|
Preference number: 3 (lower is better) Translates to: HVRSSICNTNLH*HVWFLLGFNHS Trigger: AGAGTGATTAAATCCCAGAAGAAACCAAACATGGCAATGGAGGTTTGTGTTACAGATGCTGCTCCTGACATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128230.8 ENSMUST00000155702.8 |
||
| 3UTR GCA 72 bp | ATGGTATCAGCGACTTTAGCCATGTCTAACAGAGTATaGAGATCCCCTGGTCTTGCATATGTGAAAAACCAT | + |
|
Preference number: 3 (lower is better) Translates to: MVSATLAMSNRV*RSPGLAYVKNH Trigger: ATGGTTTTTCACATATGCAAGACCAGGGGATCTGCATACTCTGTTAGACATGGCTAAAGTCGCTGATACCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155702.8 |
||
| 3UTR CCA 72 bp | TCCAGAAACCATAGCAGATGGTGTCAAATCCAGCATTaGCTTGAATACCTGGCCTATTATAAGAGACCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: SRNHSRWCQIQH*LEYLAYYKRPC Trigger: ACAAGGTCTCTTATAATAGGCCAGGTATTCAAGCCAATGCTGGATTTGACACCATCTGCTATGGTTTCTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR GCA 90 bp | GTAAGTCATCTGCCTCATCCAGCTCTTCCTCAGTGGGCCAGGTCTGCTCTCCTTGAGGACCATCCTTGCTaGCCAGCTGCCTCTTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VSHLPHPALPQWARSALLEDHPC*PAASSR Trigger: CCGAGAAGAGGCAGCTGGGCAGCAAGGATGGTCCTC...AAGGAGAGCAGACCTGGCCCACTGAGGAAGAGCTGGATGAGGCAGATGACTTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128230.8 ENSMUST00000155702.8 |
||
| CDS-3UTR TCA 90 bp | CAACAGTATGCAACCCAGCTGGTGTGGGGGAGAATGAAACTGCTCATTGAGCCGGGCACCACCAGCACCTaGTGTGGAGGACCATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QQYATQLVWGRMKLLIEPGTTST*CGGPSL Trigger: CAAGGATGGTCCTCCACATCAGGTGCTGGTGGTGCC...CGGCTCAATGAGCAGTTTCATTCTCCCCCACACCAGCTGGGTTGCATACTGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR CCA 90 bp | CAACAGTATGCAACCCAGCTGGTGTGGGGGAGAATGAAACTGCTCATTGAGCCGCTGGCGCGATGCCTCTaGTCTATTCGGCTGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QQYATQLVWGRMKLLIEPLARCL*SIRLSC Trigger: GCAGCTCAGCCGAATAGACCAGAGGCATCGCGCCAG...CGGCTCAATGAGCAGTTTCATTCTCCCCCACACCAGCTGGGTTGCATACTGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR GCA 90 bp | TCCTTTCTGTGCCAACAGTATGCAACCCAGCTGGTGTGGGGGAGAATGAAACTGAGCTGGCTGGCGCGATaGCTCTGGTCTATTCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFLCQQYATQLVWGRMKLSWLAR*LWSIRL Trigger: CAGCCGAATAGACCAGAGGCATCGCGCCAGCCAGCT...CAGTTTCATTCTCCCCCACACCAGCTGGGTTGCATACTGTTGGCACAGAAAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR GCA 90 bp | CCACAGTGGAAGATCAATTCTTCTTTCGCCTTCACAGGTTCCGTGTTGCCAGGGAGCTGGCTGGCGCGATaGCTCTGGTCTATTCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PQWKINSSFAFTGSVLPGSWLAR*LWSIRL Trigger: CAGCCGAATAGACCAGAGGCATCGCGCCAGCCAGCT...CCCTGGCAACACGGAACCTGTGAAGGCGAAAGAAGAATTGATCTTCCACTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128230.8 |
||
| CDS-3UTR GCA 90 bp | CCACAGTGGAAGATCAATTCTTCTTTCGCCTTCACAGGTTCCGTGTTGCCAGGGGAGGACCATCCTTGCTaGCCAGCTGCCTCTTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PQWKINSSFAFTGSVLPGEDHPC*PAASSR Trigger: CCGAGAAGAGGCAGCTGGGCAGCAAGGATGGTCCTC...CCCTGGCAACACGGAACCTGTGAAGGCGAAAGAAGAATTGATCTTCCACTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128230.8 |
||
| CDS-3UTR CCA 90 bp | TCGGAAGCGCCTGAACCCACAGTGGAAGATCAATTCTTCTTTCGCCTTCACAGGCTGGCGCGATGCCTCTaGTCTATTCGGCTGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SEAPEPTVEDQFFFRLHRLARCL*SIRLSC Trigger: GCAGCTCAGCCGAATAGACCAGAGGCATCGCGCCAG...CCTGTGAAGGCGAAAGAAGAATTGATCTTCCACTGTGGGTTCAGGCGCTTCCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128230.8 |
||
| CDS-3UTR TCA 90 bp | CCCCATCACTTTCATCACCTTCATCCAGAATCCACTCAGCCTGGTAACTGGATGGGCACCACCAGCACCTaGTGTGGAGGACCATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PHHFHHLHPESTQPGNWMGTTST*CGGPSL Trigger: CAAGGATGGTCCTCCACATCAGGTGCTGGTGGTGCC...CATCCAGTTACCAGGCTGAGTGGATTCTGGATGAAGGTGATGAAAGTGATGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155702.8 |
||
| CDS-3UTR CCA 90 bp | TCCTTTCTGTGCCAACAGTATGCAACCCAGCTGGTGTGGGGGAGAATGAAACTGTTTTGCTTTCGGAGCTaGCTGGCGCGATGCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SFLCQQYATQLVWGRMKLFCFRS*LARCLW Trigger: CCAGAGGCATCGCGCCAGCCAGCTCCGAAAGCAAAA...CAGTTTCATTCTCCCCCACACCAGCTGGGTTGCATACTGTTGGCACAGAAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR TCA 90 bp | CAACAGTATGCAACCCAGCTGGTGTGGGGGAGAATGAAACTGCTCATTGAGCCGTGCCGCCCGCCTTTATaGGCTTTATTCTGCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QQYATQLVWGRMKLLIEPCRPPL*ALFCCF Trigger: GAAGCAGCAGAATAAAGCTCATAAAGGCGGGCGGCA...CGGCTCAATGAGCAGTTTCATTCTCCCCCACACCAGCTGGGTTGCATACTGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR GCA 90 bp | TTACCACTCTGGACCGTTGCTTCAGTAAGTCATCTGCCTCATCCAGCTCTTCCTGTGGAGGACCATCCTTaGTGCCCAGCTGCCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPLWTVASVSHLPHPALPVEDHP*CPAASS Trigger: AGAAGAGGCAGCTGGGCAGCAAGGATGGTCCTCCAC...AGGAAGAGCTGGATGAGGCAGATGACTTACTGAAGCAACGGTCCAGAGTGGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128230.8 ENSMUST00000155702.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGCGAAGCTCGGAAGCGCCTGAACCCACAGTGGAAGATCAATTCTTCTTTCGCAGATCCCCTGATGTaGAGGACCATCCTTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KGEARKRLNPQWKINSSFADPLM*RTILAA Trigger: GGCAGCAAGGATGGTCCTCCACATCAGGGGATCTGC...GAAAGAAGAATTGATCTTCCACTGTGGGTTCAGGCGCTTCCGAGCTTCGCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128230.8 |
||
| CDS-3UTR TCA 90 bp | GCGCCTGAACCCACAGTGGAAGATCAATTCTTCTTTCGCCTTCACAGGTTCCGTTGCCGCCCGCCTTTATaGGCTTTATTCTGCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: APEPTVEDQFFFRLHRFRCRPPL*ALFCCF Trigger: GAAGCAGCAGAATAAAGCTCATAAAGGCGGGCGGCA...ACGGAACCTGTGAAGGCGAAAGAAGAATTGATCTTCCACTGTGGGTTCAGGCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128230.8 |
||
| CDS-3UTR TCA 90 bp | TGGGGCAGGCTGAACGGCCAGCTCCTTACCAGACGGTTTCTGTTTAAATTCAGGTCACCACTCCCATCCTaGGACTCCTCTTCCATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: WGRLNGQLLTRRFLFKFRSPLPS*DSSSMK Trigger: TTTCATGGAAGAGGAGTCTCAGGATGGGAGTGGTGA...CCTGAATTTAAACAGAAACCGTCTGGTAAGGAGCTGGCCGTTCAGCCTGCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR GCA 90 bp | ACGGCCAGCTCCTTACCAGACGGTTTCTGTTTAAATTCAGGCAAGATTGTCTCTGAGGACCATCCTTGCTaGCCAGCTGCCTCTTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TASSLPDGFCLNSGKIVSEDHPC*PAASSR Trigger: CCGAGAAGAGGCAGCTGGGCAGCAAGGATGGTCCTC...AGAGACAATCTTGCCTGAATTTAAACAGAAACCGTCTGGTAAGGAGCTGGCCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR TCA 90 bp | AGCACAGATGCAGGAGGGAACGTGATTGGCGCAAACACTGTCACCACGAAGGCAGAAATACTCAACCACTaGGACAGGGACATCAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: STDAGGNVIGANTVTTKAEILNH*DRDIRN Trigger: GTTTCTGATGTCCCTGTCTCAGTGGTTGAGTATTTC...TGCCTTCGTGGTGACAGTGTTTGCGCCAATCACGTTCCCTCCTGCATCTGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153316.8 |
||
| CDS-3UTR TCA 90 bp | AAAGGCGAAGCTCGGAAGCGCCTGAACCCACAGTGGAAGATCAATTCTTCTTTCAGGGCGCTCCTTGCCTaGAATACTCAACCACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KGEARKRLNPQWKINSSFRALLA*NTQPLR Trigger: TCTCAGTGGTTGAGTATTTCAGGCAAGGAGCGCCCT...GAAAGAAGAATTGATCTTCCACTGTGGGTTCAGGCGCTTCCGAGCTTCGCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153316.8 |
||
| CDS-3UTR GCA 90 bp | GCAGATGACTGCTACCAGTCTAAACTGAAAGGAGAACTGACCCCCAATCTTCATACCGACTCCCTCTTTTaGTTTCGGAGCTGGCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ADDCYQSKLKGELTPNLHTDSLF*FRSWLA Trigger: CGCCAGCCAGCTCCGAAAGCAAAAGAGGGAGTCGGT...ATGAAGATTGGGGGTCAGTTCTCCTTTCAGTTTAGACTGGTAGCAGTCATCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR GCA 90 bp | GCAGATGACTGCTACCAGTCTAAACTGAAAGGAGAACTGACCCCCAATCTTCATGTGGAGGACCATCCTTaGTGCCCAGCTGCCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ADDCYQSKLKGELTPNLHVEDHP*CPAASS Trigger: AGAAGAGGCAGCTGGGCAGCAAGGATGGTCCTCCAC...ATGAAGATTGGGGGTCAGTTCTCCTTTCAGTTTAGACTGGTAGCAGTCATCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR GCA 90 bp | CAACAGTATGCAACCCAGCTGGTGTGGGGGAGAATGAAACTGCTCATTGAGCCGATTCCTGATTCCTGCTaGGTGTCTAGGAGCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QQYATQLVWGRMKLLIEPIPDSC*VSRSRS Trigger: ACTTCTGCTCCTAGACACGCAGCAGGAATCAGGAAT...CGGCTCAATGAGCAGTTTCATTCTCCCCCACACCAGCTGGGTTGCATACTGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR GCA 90 bp | TCCTTTCTGTGCCAACAGTATGCAACCCAGCTGGTGTGGGGGAGAATGAAACTGAGCATTCCTGATTCCTaGTGCGTGTCTAGGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SFLCQQYATQLVWGRMKLSIPDS*CVSRSR Trigger: TCTGCTCCTAGACACGCAGCAGGAATCAGGAATGCT...CAGTTTCATTCTCCCCCACACCAGCTGGGTTGCATACTGTTGGCACAGAAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR CCA 90 bp | CAGTTCCACAGGCTTAAACCACATCACATCCTCTCTGTTGAAGAACATGTACCGTTTTGCTTTCGGAGCTaGCTGGCGCGATGCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QFHRLKPHHILSVEEHVPFCFRS*LARCLW Trigger: CCAGAGGCATCGCGCCAGCCAGCTCCGAAAGCAAAA...CGGTACATGTTCTTCAACAGAGAGGATGTGATGTGGTTTAAGCCTGTGGAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128230.8 |
||
| CDS-3UTR TCA 90 bp | ACGGCCAGCTCCTTACCAGACGGTTTCTGTTTAAATTCAGGCAAGATTGTCTCTCCTGTCTGGGTCCACTaGAAACAGATGGCCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: TASSLPDGFCLNSGKIVSPVWVH*KQMACS Trigger: GCTACAGGCCATCTGTTTTCAGTGGACCCAGACAGG...AGAGACAATCTTGCCTGAATTTAAACAGAAACCGTCTGGTAAGGAGCTGGCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR GCA 90 bp | GCGCCTGAACCCACAGTGGAAGATCAATTCTTCTTTCGCCTTCACAGGTTCCGTGCCTCTTCAGCTTCTTaGAGAGGATTTTCGGTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: APEPTVEDQFFFRLHRFRASSAS*RGFSVL Trigger: TAGGACCGAAAATCCTCTGCAAGAAGCTGAAGAGGC...ACGGAACCTGTGAAGGCGAAAGAAGAATTGATCTTCCACTGTGGGTTCAGGCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128230.8 |
||
| CDS-3UTR GCA 90 bp | CAACAGTATGCAACCCAGCTGGTGTGGGGGAGAATGAAACTGCTCATTGAGCCGCTGAGATTTTCAAGGTaGCCACTAAGTCACTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QQYATQLVWGRMKLLIEPLRFSR*PLSHSP Trigger: AGGAGAGTGACTTAGTGGGCACCTTGAAAATCTCAG...CGGCTCAATGAGCAGTTTCATTCTCCCCCACACCAGCTGGGTTGCATACTGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR CCA 90 bp | CAACAGTATGCAACCCAGCTGGTGTGGGGGAGAATGAAACTGCTCATTGAGCCGCAGTTTAAATGCCTCTaGAAGGGAAATCCTGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QQYATQLVWGRMKLLIEPQFKCL*KGNPAV Trigger: CACAGCAGGATTTCCCTTCCAGAGGCATTTAAACTG...CGGCTCAATGAGCAGTTTCATTCTCCCCCACACCAGCTGGGTTGCATACTGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR CCA 90 bp | TCCTTTCTGTGCCAACAGTATGCAACCCAGCTGGTGTGGGGGAGAATGAAACTGAGAAGCATAAAACTCTaGGTGCTTCCCCGTTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: SFLCQQYATQLVWGRMKLRSIKL*VLPRSL Trigger: GAGTGAACGGGGAAGCACCCAGAGTTTTATGCTTCT...CAGTTTCATTCTCCCCCACACCAGCTGGGTTGCATACTGTTGGCACAGAAAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR TCA 90 bp | ACGGCCAGCTCCTTACCAGACGGTTTCTGTTTAAATTCAGGCAAGATTGTCTCTAGGGCGCTCCTTGCCTaGAATACTCAACCACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TASSLPDGFCLNSGKIVSRALLA*NTQPLR Trigger: TCTCAGTGGTTGAGTATTTCAGGCAAGGAGCGCCCT...AGAGACAATCTTGCCTGAATTTAAACAGAAACCGTCTGGTAAGGAGCTGGCCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR TCA 90 bp | TCCTTTCTGTGCCAACAGTATGCAACCCAGCTGGTGTGGGGGAGAATGAAACTGTCACATCCTCTCTGTTaGAGAACATGTACCGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: SFLCQQYATQLVWGRMKLSHPLC*RTCTAL Trigger: TAGTGCGGTACATGTTCTTCAACAGAGAGGATGTGA...CAGTTTCATTCTCCCCCACACCAGCTGGGTTGCATACTGTTGGCACAGAAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR GCA 90 bp | AGCATAATCTCTAGGAAGGTTTTCTTTAGGATCCCAAGGAGATGTCCGGAAACTGTGGAGGACCATCCTTaGTGCCCAGCTGCCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SIISRKVFFRIPRRCPETVEDHP*CPAASS Trigger: AGAAGAGGCAGCTGGGCAGCAAGGATGGTCCTCCAC...AGTTTCCGGACATCTCCTTGGGATCCTAAAGAAAACCTTCCTAGAGATTATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128230.8 ENSMUST00000155702.8 |
||
| CDS-3UTR GCA 90 bp | ACCCCCAATCTTCATCCTCCAGAAACCATAGCAGATGGTGTCAAATCCAGCATTTCAGTGGGCCAGGTCTaGTCTCCTTCCATAGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: TPNLHPPETIADGVKSSISVGQV*SPSIGS Trigger: AGATCCTATGGAAGGAGAGCAGACCTGGCCCACTGA...AATGCTGGATTTGACACCATCTGCTATGGTTTCTGGAGGATGAAGATTGGGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR GCA 90 bp | TCCTTTCTGTGCCAACAGTATGCAACCCAGCTGGTGTGGGGGAGAATGAAACTGTCTCTCCTCGTCCTCTaGATCTACTTTCTCATCGTA | + |
|
Preference number: 4 (lower is better) Translates to: SFLCQQYATQLVWGRMKLSLLVL*IYFLIV Trigger: TACGATGAGAAAGTAGATGCAGAGGACGAGGAGAGA...CAGTTTCATTCTCCCCCACACCAGCTGGGTTGCATACTGTTGGCACAGAAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR CCA 90 bp | TCCTTTCTGTGCCAACAGTATGCAACCCAGCTGGTGTGGGGGAGAATGAAACTGTATTTGTTTCTTTGGTaGGAAGCCAGAAAGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFLCQQYATQLVWGRMKLYLFLW*EARKAL Trigger: CAGGGCCTTTCTGGCTTCCCACCAAAGAAACAAATA...CAGTTTCATTCTCCCCCACACCAGCTGGGTTGCATACTGTTGGCACAGAAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR CCA 90 bp | TCCTTTCTGTGCCAACAGTATGCAACCCAGCTGGTGTGGGGGAGAATGAAACTGCGCCTGAACCCACAGTaGAAGATCAATTCTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SFLCQQYATQLVWGRMKLRLNPQ*KINSSF Trigger: GAAAGAAGAATTGATCTTCCACTGTGGGTTCAGGCG...CAGTTTCATTCTCCCCCACACCAGCTGGGTTGCATACTGTTGGCACAGAAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR TCA 90 bp | TATCCGAGCATAATCTCTAGGAAGGTTTTCTTTAGGATCCCAAGGAGATGTCCGTCTGGTCTATTCGGCTaGGCTGCCTCTTCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YPSIISRKVFFRIPRRCPSGLFG*AASSAS Trigger: AGAAGCTGAAGAGGCAGCTCAGCCGAATAGACCAGA...CGGACATCTCCTTGGGATCCTAAAGAAAACCTTCCTAGAGATTATGCTCGGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128230.8 |
||
| CDS-3UTR TCA 90 bp | CTGAACGGCCAGCTCCTTACCAGACGGTTTCTGTTTAAATTCAGGCAAGATTGTTGTAAAGACTCCTGGTaGTCAGGGTCTGCCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LNGQLLTRRFLFKFRQDCCKDSW*SGSAFI Trigger: GATGAAGGCAGACCCTGATCACCAGGAGTCTTTACA...ACAATCTTGCCTGAATTTAAACAGAAACCGTCTGGTAAGGAGCTGGCCGTTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR GCA 90 bp | ACCCCCAATCTTCATCCTCCAGAAACCATAGCAGATGGTGTCAAATCCAGCATTACCACTCTGGACCGTTaGTTCAGTAAGTCATCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TPNLHPPETIADGVKSSITTLDR*FSKSSA Trigger: GGCAGATGACTTACTGAAGCAACGGTCCAGAGTGGT...AATGCTGGATTTGACACCATCTGCTATGGTTTCTGGAGGATGAAGATTGGGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR TCA 90 bp | AGCATAATCTCTAGGAAGGTTTTCTTTAGGATCCCAAGGAGATGTCCGGAAACTTGCCGCCCGCCTTTATaGGCTTTATTCTGCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SIISRKVFFRIPRRCPETCRPPL*ALFCCF Trigger: GAAGCAGCAGAATAAAGCTCATAAAGGCGGGCGGCA...AGTTTCCGGACATCTCCTTGGGATCCTAAAGAAAACCTTCCTAGAGATTATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128230.8 ENSMUST00000155702.8 |
||
| CDS-3UTR GCA 90 bp | ACCCCCAATCTTCATCCTCCAGAAACCATAGCAGATGGTGTCAAATCCAGCATTGTAGCGATGAGGCTGTaGATTCCATTTCTTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TPNLHPPETIADGVKSSIVAMRL*IPFLLC Trigger: GCAGAGAAGAAATGGAATGCACAGCCTCATCGCTAC...AATGCTGGATTTGACACCATCTGCTATGGTTTCTGGAGGATGAAGATTGGGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR CCA 90 bp | ACCCCCAATCTTCATCCTCCAGAAACCATAGCAGATGGTGTCAAATCCAGCATTCACTTCATATGGCCATaGGTACCTAGAGGCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TPNLHPPETIADGVKSSIHFIWP*VPRGSL Trigger: CAAAGAGCCTCTAGGTACCCATGGCCATATGAAGTG...AATGCTGGATTTGACACCATCTGCTATGGTTTCTGGAGGATGAAGATTGGGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR TCA 90 bp | GCAGATGACTGCTACCAGTCTAAACTGAAAGGAGAACTGACCCCCAATCTTCATGAAATACTCAACCACTaGGACAGGGACATCAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ADDCYQSKLKGELTPNLHEILNH*DRDIRN Trigger: GTTTCTGATGTCCCTGTCTCAGTGGTTGAGTATTTC...ATGAAGATTGGGGGTCAGTTCTCCTTTCAGTTTAGACTGGTAGCAGTCATCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR TCA 90 bp | ACGGCCAGCTCCTTACCAGACGGTTTCTGTTTAAATTCAGGCAAGATTGTCTCTCATTTCTTCTCTGCTTaGAAAGCAGCACAGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TASSLPDGFCLNSGKIVSHFFSA*KAAQMQ Trigger: CTGCATCTGTGCTGCTTTTCAAGCAGAGAAGAAATG...AGAGACAATCTTGCCTGAATTTAAACAGAAACCGTCTGGTAAGGAGCTGGCCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR TCA 90 bp | ACCCAAATGTCTACTTCATTTTTCGAATGTAACCTACTAGACTCCGGCTCCGTTGAACCACTCTCTTTATaGCCATCCTGTCTGGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TQMSTSFFECNLLDSGSVEPLSL*PSCLGP Trigger: TGGACCCAGACAGGATGGTCATAAAGAGAGTGGTTC...AACGGAGCCGGAGTCTAGTAGGTTACATTCGAAAAATGAAGTAGACATTTGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR GCA 90 bp | CCTCCAGAAACCATAGCAGATGGTGTCAAATCCAGCATTGGCTTGAATACCTGGCTGAAGCAGTTTAAATaGCTCTGGAAGGGAAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: PPETIADGVKSSIGLNTWLKQFK*LWKGNP Trigger: AGGATTTCCCTTCCAGAGGCATTTAAACTGCTTCAG...CCAGGTATTCAAGCCAATGCTGGATTTGACACCATCTGCTATGGTTTCTGGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR CCA 90 bp | ACCCTGACAGTAGATCACATACTTATCACAACAAACCCAAATGTCTACTTCATTCACCAGCACCTGATGTaGAGGACCATCCTTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLTVDHILITTNPNVYFIHQHLM*RTILAA Trigger: GGCAGCAAGGATGGTCCTCCACATCAGGTGCTGGTG...AATGAAGTAGACATTTGGGTTTGTTGTGATAAGTATGTGATCTACTGTCAGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR CCA 90 bp | ACCCCCAATCTTCATCCTCCAGAAACCATAGCAGATGGTGTCAAATCCAGCATTCCTTCTTTACCACTCTaGACCGTTGCTTCAGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TPNLHPPETIADGVKSSIPSLPL*TVASVS Trigger: ACTTACTGAAGCAACGGTCCAGAGTGGTAAAGAAGG...AATGCTGGATTTGACACCATCTGCTATGGTTTCTGGAGGATGAAGATTGGGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR TCA 90 bp | ACAACTTTTATTAAAGTGCTTCAAGGTCTTGTTTCCATTCTGATCACCAAGGGTAAGCTCGGAAGCGCCTaGACCCACAGTGGAAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: TTFIKVLQGLVSILITKGKLGSA*THSGRS Trigger: TGATCTTCCACTGTGGGTTCAGGCGCTTCCGAGCTT...ACCCTTGGTGATCAGAATGGAAACAAGACCTTGAAGCACTTTAATAAAAGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR TCA 90 bp | ACCCCCAATCTTCATCCTCCAGAAACCATAGCAGATGGTGTCAAATCCAGCATTCTGGTCTTGCATATGTaGAAAACCATCGATGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TPNLHPPETIADGVKSSILVLHM*KTIDVS Trigger: TGAAACATCGATGGTTTTTCACATATGCAAGACCAG...AATGCTGGATTTGACACCATCTGCTATGGTTTCTGGAGGATGAAGATTGGGGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR TCA 90 bp | ACCCTGACAGTAGATCACATACTTATCACAACAAACCCAAATGTCTACTTCATTTCAGCTGCTGTGTGCTaGGAGAACAAAGGCGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLTVDHILITTNPNVYFISAAVC*ENKGEA Trigger: AGCTTCGCCTTTGTTCTCTCAGCACACAGCAGCTGA...AATGAAGTAGACATTTGGGTTTGTTGTGATAAGTATGTGATCTACTGTCAGGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR TCA 90 bp | CTGAACGGCCAGCTCCTTACCAGACGGTTTCTGTTTAAATTCAGGCAAGATTGTATTAATACTGTGTCCTaGGATTTCAGCTTCCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LNGQLLTRRFLFKFRQDCINTVS*DFSFPS Trigger: TGATGGGAAGCTGAAATCTCAGGACACAGTATTAAT...ACAATCTTGCCTGAATTTAAACAGAAACCGTCTGGTAAGGAGCTGGCCGTTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| 3UTR CAA 72 bp | GAAACCATAGCAGATGGTGTCAAATCCAGCATTGGCTaGAATACCTGGCCTATTATAAGAGACCTTGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ETIADGVKSSIG*NTWPIIRDLVD Trigger: ATCCACAAGGTCTCTTATAATAGGCCAGGTATTCAAGCCAATGCTGGATTTGACACCATCTGCTATGGTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR TCA 90 bp | CCTGACAGTAGATCACATACTTATCACAACAAACCCAAATGTCTACTTCATTTTTCTGGTCTATTCGGCTaGGCTGCCTCTTCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PDSRSHTYHNKPKCLLHFSGLFG*AASSAS Trigger: AGAAGCTGAAGAGGCAGCTCAGCCGAATAGACCAGA...AAAATGAAGTAGACATTTGGGTTTGTTGTGATAAGTATGTGATCTACTGTCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR TCA 90 bp | GCAGATGACTGCTACCAGTCTAAACTGAAAGGAGAACTGACCCCCAATCTTCATTACTTCAGACACTGTTaGAGAGATGTCACTTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: ADDCYQSKLKGELTPNLHYFRHC*RDVTFN Trigger: GTTAAAAGTGACATCTCTTCAACAGTGTCTGAAGTA...ATGAAGATTGGGGGTCAGTTCTCCTTTCAGTTTAGACTGGTAGCAGTCATCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR GCA 90 bp | ACCCCCAATCTTCATCCTCCAGAAACCATAGCAGATGGTGTCAAATCCAGCATTTTTATGTTTATCAGCTaGTGTGTGCTGAGAGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: TPNLHPPETIADGVKSSIFMFIS*CVLREQ Trigger: TTGTTCTCTCAGCACACAGCAGCTGATAAACATAAA...AATGCTGGATTTGACACCATCTGCTATGGTTTCTGGAGGATGAAGATTGGGGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR GCA 90 bp | ACAACTTTTATTAAAGTGCTTCAAGGTCTTGTTTCCATTCTGATCACCAAGGGTGCCTCTTCAGCTTCTTaGAGAGGATTTTCGGTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: TTFIKVLQGLVSILITKGASSAS*RGFSVL Trigger: TAGGACCGAAAATCCTCTGCAAGAAGCTGAAGAGGC...ACCCTTGGTGATCAGAATGGAAACAAGACCTTGAAGCACTTTAATAAAAGTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR GCA 90 bp | ACCCAAATGTCTACTTCATTTTTCGAATGTAACCTACTAGACTCCGGCTCCGTTAACACAAACCTCCATTaGCATGTTTGGTTTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TQMSTSFFECNLLDSGSVNTNLH*HVWFLL Trigger: CAGAAGAAACCAAACATGGCAATGGAGGTTTGTGTT...AACGGAGCCGGAGTCTAGTAGGTTACATTCGAAAAATGAAGTAGACATTTGGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR GCA 90 bp | ACAACTTTTATTAAAGTGCTTCAAGGTCTTGTTTCCATTCTGATCACCAAGGGTATCAAGGGCGCTCCTTaGCTGAAATACTCAACCACT | + |
|
Preference number: 4 (lower is better) Translates to: TTFIKVLQGLVSILITKGIKGAP*LKYSTT Trigger: AGTGGTTGAGTATTTCAGGCAAGGAGCGCCCTTGAT...ACCCTTGGTGATCAGAATGGAAACAAGACCTTGAAGCACTTTAATAAAAGTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR CCA 90 bp | ACAACTTTTATTAAAGTGCTTCAAGGTCTTGTTTCCATTCTGATCACCAAGGGTCAGCTAGTGTATAGGTaGGAAGGCCCTGAGCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TTFIKVLQGLVSILITKGQLVYR*EGPEQK Trigger: TTTTTGCTCAGGGCCTTCCCACCTATACACTAGCTG...ACCCTTGGTGATCAGAATGGAAACAAGACCTTGAAGCACTTTAATAAAAGTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR GCA 90 bp | ACCCTGACAGTAGATCACATACTTATCACAACAAACCCAAATGTCTACTTCATTCAGATCCCCTGGTCTTaGATATGTGAAAAACCATCG | + |
|
Preference number: 4 (lower is better) Translates to: TLTVDHILITTNPNVYFIQIPWS*ICEKPS Trigger: CGATGGTTTTTCACATATGCAAGACCAGGGGATCTG...AATGAAGTAGACATTTGGGTTTGTTGTGATAAGTATGTGATCTACTGTCAGGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR CCA 90 bp | ACAACTTTTATTAAAGTGCTTCAAGGTCTTGTTTCCATTCTGATCACCAAGGGTTTTAACCCAAGGTACTaGCTCTGGTACATATGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TTFIKVLQGLVSILITKGFNPRY*LWYIWV Trigger: GACCCATATGTACCAGAGCCAGTACCTTGGGTTAAA...ACCCTTGGTGATCAGAATGGAAACAAGACCTTGAAGCACTTTAATAAAAGTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR CCA 90 bp | ACAACTTTTATTAAAGTGCTTCAAGGTCTTGTTTCCATTCTGATCACCAAGGGTGGTCATAAGTCCACTTaGGAAATACTCGCTTATAGA | + |
|
Preference number: 4 (lower is better) Translates to: TTFIKVLQGLVSILITKGGHKST*EILAYR Trigger: TCTATAAGCGAGTATTTCCCAAGTGGACTTATGACC...ACCCTTGGTGATCAGAATGGAAACAAGACCTTGAAGCACTTTAATAAAAGTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR TCA 90 bp | CCTGACAGTAGATCACATACTTATCACAACAAACCCAAATGTCTACTTCATTTTACAGGAGCATCTATTTaGTTCATTTGGAAATCACCG | + |
|
Preference number: 4 (lower is better) Translates to: PDSRSHTYHNKPKCLLHFTGASI*FIWKSP Trigger: CGGTGATTTCCAAATGAATCAAATAGATGCTCCTGT...AAAATGAAGTAGACATTTGGGTTTGTTGTGATAAGTATGTGATCTACTGTCAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR CCA 90 bp | ACAACTTTTATTAAAGTGCTTCAAGGTCTTGTTTCCATTCTGATCACCAAGGGTATGTTTGGTTTCTTCTaGGATTTAATCACTCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TTFIKVLQGLVSILITKGMFGFF*DLITLG Trigger: TCCTAGAGTGATTAAATCCCAGAAGAAACCAAACAT...ACCCTTGGTGATCAGAATGGAAACAAGACCTTGAAGCACTTTAATAAAAGTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS GCA 90 bp | CTGCCCAGCTGCCTCTTCTCGGCCAGAACCTTTGCTGTCCCGTTGTaGGGACCCACCGCCGTGATGCCGCCCGCCTTTATGAGCTTTATT | + |
|
Preference number: 5 (lower is better) Translates to: LPSCLFSARTFAVPL*GPTAVMPPAFMSFI Trigger: AATAAAGCTCATAAAGGCGGGCGGCATCACGGCGGTGGGTCCGCACAACGGGACAGCAAAGGTTCTGGCCGAGAAGAGGCAGCTGGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155702.8 |
||
| CDS-3UTR CAA 90 bp | CAACAGTATGCAACCCAGCTGGTGTGGGGGAGAATGAAACTGCTCATTGAGCCGCCCCGGCGGCCCCACTaGGTTCTCAGTTCCACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QQYATQLVWGRMKLLIEPPRRPH*VLSSTG Trigger: GCCTGTGGAACTGAGAACCAAGTGGGGCCGCCGGGG...CGGCTCAATGAGCAGTTTCATTCTCCCCCACACCAGCTGGGTTGCATACTGTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR CAA 90 bp | GCCCTGAGCAAAAAGGCAAGACAGGCAATAATCCCCCGTACTGTCCCAGCCTTCTGTGGAGGACCATCCTaGCTGCCCAGCTGCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ALSKKARQAIIPRTVPAFCGGPS*LPSCLF Trigger: GAAGAGGCAGCTGGGCAGCAAGGATGGTCCTCCACA...GAAGGCTGGGACAGTACGGGGGATTATTGCCTGTCTTGCCTTTTTGCTCAGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000128230.8 ENSMUST00000155702.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGCAGGCTGAACGGCCAGCTCCTTACCAGACGGTTTCTGTTTAAATTCAGGAACCGACTCCCTCTTTaGCTTTCGGAGCTGGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: WGRLNGQLLTRRFLFKFRNRLPL*LSELAG Trigger: GCCAGCCAGCTCCGAAAGCAAAAGAGGGAGTCGGTT...CCTGAATTTAAACAGAAACCGTCTGGTAAGGAGCTGGCCGTTCAGCCTGCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR CAA 90 bp | TCCTTTCTGTGCCAACAGTATGCAACCCAGCTGGTGTGGGGGAGAATGAAACTGTGTGGAGGACCATCCTaGCTGCCCAGCTGCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SFLCQQYATQLVWGRMKLCGGPS*LPSCLF Trigger: GAAGAGGCAGCTGGGCAGCAAGGATGGTCCTCCACA...CAGTTTCATTCTCCCCCACACCAGCTGGGTTGCATACTGTTGGCACAGAAAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR CAA 90 bp | CCACAGTGGAAGATCAATTCTTCTTTCGCCTTCACAGGTTCCGTGTTGCCAGGGAACCGACTCCCTCTTTaGCTTTCGGAGCTGGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PQWKINSSFAFTGSVLPGNRLPL*LSELAG Trigger: GCCAGCCAGCTCCGAAAGCAAAAGAGGGAGTCGGTT...CCCTGGCAACACGGAACCTGTGAAGGCGAAAGAAGAATTGATCTTCCACTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128230.8 |
||
| CDS-3UTR CAA 90 bp | CTGAACCCACAGTGGAAGATCAATTCTTCTTTCGCCTTCACAGGTTCCGTGTTGTGTGGAGGACCATCCTaGCTGCCCAGCTGCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LNPQWKINSSFAFTGSVLCGGPS*LPSCLF Trigger: GAAGAGGCAGCTGGGCAGCAAGGATGGTCCTCCACA...CAACACGGAACCTGTGAAGGCGAAAGAAGAATTGATCTTCCACTGTGGGTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128230.8 |
||
| CDS-3UTR CAA 90 bp | ACCCCCAATCTTCATCCTCCAGAAACCATAGCAGATGGTGTCAAATCCAGCATTTTCACAGGTTCCGTGTaGCCAGGGTTCCGGCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: TPNLHPPETIADGVKSSIFTGSV*PGFRLT Trigger: GGTGAGCCGGAACCCTGGCAACACGGAACCTGTGAA...AATGCTGGATTTGACACCATCTGCTATGGTTTCTGGAGGATGAAGATTGGGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR CAA 90 bp | TGGGGCAGGCTGAACGGCCAGCTCCTTACCAGACGGTTTCTGTTTAAATTCAGGATCACATCCTCTCTGTaGAAGAACATGTACCGCACT | + |
|
Preference number: 5 (lower is better) Translates to: WGRLNGQLLTRRFLFKFRITSSL*KNMYRT Trigger: AGTGCGGTACATGTTCTTCAACAGAGAGGATGTGAT...CCTGAATTTAAACAGAAACCGTCTGGTAAGGAGCTGGCCGTTCAGCCTGCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS TCA 90 bp | GTGCTTCCCCGTTCACTCAAATACACCGTTCCCAAGTCTTCATTCTaGAGCAGTTTAAATGCCTCTGGAAGGGAAATCCTGCTGTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VLPRSLKYTVPKSSF*SSLNASGREILLCR Trigger: TCTGCACAGCAGGATTTCCCTTCCAGAGGCATTTAAACTGCTTCAGAATGAAGACTTGGGAACGGTGTATTTGAGTGAACGGGGAAGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR CAA 90 bp | CCTCCAGAAACCATAGCAGATGGTGTCAAATCCAGCATTGGCTTGAATACCTGGTCTAGGAGCAGAAGTTaGTCTTCAGGGAAGCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PPETIADGVKSSIGLNTWSRSRS*SSGKRF Trigger: GAAACGCTTCCCTGAAGACAAACTTCTGCTCCTAGA...CCAGGTATTCAAGCCAATGCTGGATTTGACACCATCTGCTATGGTTTCTGGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR CAA 90 bp | ACCCAAATGTCTACTTCATTTTTCGAATGTAACCTACTAGACTCCGGCTCCGTTAATCAAGGGCGCTCCTaGCCTGAAATACTCAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: TQMSTSFFECNLLDSGSVNQGRS*PEILNH Trigger: GTGGTTGAGTATTTCAGGCAAGGAGCGCCCTTGATT...AACGGAGCCGGAGTCTAGTAGGTTACATTCGAAAAATGAAGTAGACATTTGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR CAA 90 bp | CCTCCAGAAACCATAGCAGATGGTGTCAAATCCAGCATTGGCTTGAATACCTGGCACAGGAGCATCTATTaGATTCATTTGGAAATCACC | + |
|
Preference number: 5 (lower is better) Translates to: PPETIADGVKSSIGLNTWHRSIY*IHLEIT Trigger: GGTGATTTCCAAATGAATCAAATAGATGCTCCTGTG...CCAGGTATTCAAGCCAATGCTGGATTTGACACCATCTGCTATGGTTTCTGGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS-3UTR CAA 90 bp | ACCCAAATGTCTACTTCATTTTTCGAATGTAACCTACTAGACTCCGGCTCCGTTATCTATTTGATTCATTaGGAAATCACCGTGTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: TQMSTSFFECNLLDSGSVIYLIH*EITVSN Trigger: GTTGGACACGGTGATTTCCAAATGAATCAAATAGAT...AACGGAGCCGGAGTCTAGTAGGTTACATTCGAAAAATGAAGTAGACATTTGGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS GCA 72 bp | CTTGCTGCCCAGCTGCCTCTTCTCGGCCAGAACCTTTaGTGTCCCGTTGTGCGGACCCACCGCCGTGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: LAAQLPLLGQNL*CPVVRTHRRDA Trigger: GGCATCACGGCGGTGGGTCCGCACAACGGGACAGCAAAGGTTCTGGCCGAGAAGAGGCAGCTGGGCAGCAAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155702.8 |
||
| CDS GCA 72 bp | GATTTTCGGTCCTACCCGGCCTTTGCTGTCCCGTTGTaGGGACCCACCGCCGTGATGCCGCCCGCCTTTATG | + |
|
Preference number: 6 (lower is better) Translates to: DFRSYPAFAVPL*GPTAVMPPAFM Trigger: CATAAAGGCGGGCGGCATCACGGCGGTGGGTCCGCACAACGGGACAGCAAAGGCCGGGTAGGACCGAAAATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045807.14 ENSMUST00000128230.8 |
||
| CDS GCA 72 bp | GCACCACCAGCACCTGATGTGGAGGACCATCCTTGCTaGCCAGCTGCCTCTTCTCGGCCAGAACCGACTCCC | + |
|
Preference number: 6 (lower is better) Translates to: APPAPDVEDHPC*PAASSRPEPTP Trigger: GGGAGTCGGTTCTGGCCGAGAAGAGGCAGCTGGGCAGCAAGGATGGTCCTCCACATCAGGTGCTGGTGGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
||
| CDS GCA 72 bp | TGCCTCTTCTCGGCCAGAACCTTTGCTGTCCCGTTGTaGGGACCCACCGCCGTGATGCCGCCCGCCTTTATG | + |
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Preference number: 6 (lower is better) Translates to: CLFSARTFAVPL*GPTAVMPPAFM Trigger: CATAAAGGCGGGCGGCATCACGGCGGTGGGTCCGCACAACGGGACAGCAAAGGTTCTGGCCGAGAAGAGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155702.8 |
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| CDS CAA 90 bp | TTGCTGCCCAGCTGCCTCTTCTCGGCCAGAACCTTTGCTGTCCCGTaGTGCGGACCCACCGCCGTGATGCCGCCCGCCTTTATGAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: LLPSCLFSARTFAVP*CGPTAVMPPAFMSF Trigger: AAAGCTCATAAAGGCGGGCGGCATCACGGCGGTGGGTCCGCACAACGGGACAGCAAAGGTTCTGGCCGAGAAGAGGCAGCTGGGCAGCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155702.8 |
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| CDS GCA 72 bp | GTATGCAGATCCCCTGATGTGGAGGACCATCCTTGCTaGCCAGCTGCCTCTTCTCGGCCAGAACCGACTCCC | + |
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Preference number: 6 (lower is better) Translates to: VCRSPDVEDHPC*PAASSRPEPTP Trigger: GGGAGTCGGTTCTGGCCGAGAAGAGGCAGCTGGGCAGCAAGGATGGTCCTCCACATCAGGGGATCTGCATAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128230.8 |
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| CDS GCA 72 bp | GCACCACCAGCACCTGATGTGGAGGACCATCCTTGCTaGCCAGCTGCCTCTTCTCGGCCAGAACCTTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: APPAPDVEDHPC*PAASSRPEPLL Trigger: CAGCAAAGGTTCTGGCCGAGAAGAGGCAGCTGGGCAGCAAGGATGGTCCTCCACATCAGGTGCTGGTGGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155702.8 |
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| CDS GCA 72 bp | AGAGTATGCAGATCCCCTGATGTGGAGGACCATCCTTaGTGCCCAGCTGCCTCTTCTCGGCCAGAACCGACT | + |
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Preference number: 6 (lower is better) Translates to: RVCRSPDVEDHP*CPAASSRPEPT Trigger: AGTCGGTTCTGGCCGAGAAGAGGCAGCTGGGCAGCAAGGATGGTCCTCCACATCAGGGGATCTGCATACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128230.8 |
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| CDS TCA 72 bp | CGTTCACTCAAATACACCGTTCCCAAGTCTTCATTCTaGAGCAGTTTAAATGCCTCTGGAAGGGAAATCCTG | + |
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Preference number: 6 (lower is better) Translates to: RSLKYTVPKSSF*SSLNASGREIL Trigger: CAGGATTTCCCTTCCAGAGGCATTTAAACTGCTTCAGAATGAAGACTTGGGAACGGTGTATTTGAGTGAACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045807.14 |
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