Pregenerated sensors for TSPYL5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038984Ensembl transcript IDs: ENSMUST00000042021.5
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCACATTCTTGAAGATAAGTCCAAAGTGGCTACCATGTATGGTATaGACAGAAGGCAGACAACCAAACCCACGTGGTCAGCCTAACAGG | + |
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Preference number: 1 (lower is better) Translates to: VTFLKISPKWLPCMV*TEGRQPNPRGQPNR Trigger: CCTGTTAGGCTGACCACGTGGGTTTGGTTGTCTGCCTTCTGTTCATACCATACATGGTAGCCACTTTGGACTTATCTTCAAGAATGTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR TCA 90 bp | GAACAAAGCCAGGATTCAGGACCTATGTCTGACCATAGACTCTCTTaGGACCTTTTGGTTTTTCTTTATCCTATCTCAGCCTACTACATG | + |
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Preference number: 1 (lower is better) Translates to: EQSQDSGPMSDHRLS*DLLVFLYPISAYYM Trigger: CATGTAGTAGGCTGAGATAGGATAAAGAAAAACCAAAAGGTCTCAAGAGAGTCTATGGTCAGACATAGGTCCTGAATCCTGGCTTTGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR TCA 90 bp | ATAACTATCTCTGCAGCATCACAATGCATTTCTATCAAGTTTTACTaGCCCACTCAATACCAGGTTCATACCTATCTTGCCCTGATTCCC | + |
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Preference number: 1 (lower is better) Translates to: ITISAASQCISIKFY*PTQYQVHTYLALIP Trigger: GGGAATCAGGGCAAGATAGGTATGAACCTGGTATTGAGTGGGTCAGTAAAACTTGATAGAAATGCATTGTGATGCTGCAGAGATAGTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR-3UTR TCA 90 bp | ACACAGACAAACTTTGGTAGAGATGGTCCAGCTCAGCCTGCACACTTACCAGAAATAGCAAAGCACTACTaGGTGGGAAAGCTGGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: TQTNFGRDGPAQPAHLPEIAKHY*VGKLGA Trigger: AGCCCCCAGCTTTCCCACTCAGTAGTGCTTTGCTAT...TTCTGGTAAGTGTGCAGGCTGAGCTGGACCATCTCTACCAAAGTTTGTCTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR-3UTR TCA 90 bp | GCAGTTCTTGAGGTCTTTGATAAGCAAGATGGAGCCAATAACACCCACCTAGCCCTGCTGGACCTAGGCTaGAGTGGGAAACAAAATAGG | + |
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Preference number: 2 (lower is better) Translates to: AVLEVFDKQDGANNTHLALLDLG*SGKQNR Trigger: CCTATTTTGTTTCCCACTTCAGCCTAGGTCCAGCAG...GGCTAGGTGGGTGTTATTGGCTCCATCTTGCTTATCAAAGACCTCAAGAACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR-3UTR TCA 90 bp | GCTATTTTAAAAGGCTGGGAGAGGGTTCATAAGGAGAGTAGGAAGTCCCAAGGTCAACAGTCAATGGACTaGCTGCAGTCAGGCATAGCC | + |
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Preference number: 2 (lower is better) Translates to: AILKGWERVHKESRKSQGQQSMD*LQSGIA Trigger: GGCTATGCCTGACTGCAGTCAGTCCATTGACTGTTG...ACCTTGGGACTTCCTACTCTCCTTATGAACCCTCTCCCAGCCTTTTAAAATAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR-3UTR TCA 90 bp | AGTCTTCCATACCAGCATGGGGGCTGGCTTACAGAGTTCTACTTTCCAAAGAAGCTAGCAGGCTGTCTATaGGGCAAGAAGAGATGTATG | + |
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Preference number: 2 (lower is better) Translates to: SLPYQHGGWLTEFYFPKKLAGCL*GKKRCM Trigger: CATACATCTCTTCTTGCCTCATAGACAGCCTGCTAG...CTTCTTTGGAAAGTAGAACTCTGTAAGCCAGCCCCCATGCTGGTATGGAAGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR-3UTR TCA 90 bp | GTTATTGTGATCATGAGAGTGCACATTTCAGCTCAATGCCCCAGTCTCCCAAAGGGCTGCCCACCAATCTaGCAAGCAGTAGGTTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: VIVIMRVHISAQCPSLPKGCPPI*QAVGFL Trigger: TAGAAAACCTACTGCTTGTCAGATTGGTGGGCAGCC...CTTTGGGAGACTGGGGCATTGAGCTGAAATGTGCACTCTCATGATCACAATAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR-3UTR TCA 90 bp | AGGGTTCATAAGGAGAGTAGGAAGTCCCAAGGTAGGTTGATAGGGAAGGAGACTCTACCATGTATGGTATaGACAGAAGGCAGACAACCA | + |
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Preference number: 2 (lower is better) Translates to: RVHKESRKSQGRLIGKETLPCMV*TEGRQP Trigger: TGGTTGTCTGCCTTCTGTTCATACCATACATGGTAG...AGTCTCCTTCCCTATCAACCTACCTTGGGACTTCCTACTCTCCTTATGAACCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR-3UTR CCA 90 bp | AGTCTTCCATACCAGCATGGGGGCTGGCTTACAGAGTTCTACTTTCCAAAGAAGGACAAGGTGAGGTCATaGGGAAGCAGAGAATATTAT | + |
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Preference number: 2 (lower is better) Translates to: SLPYQHGGWLTEFYFPKKDKVRS*GSREYY Trigger: ATAATATTCTCTGCTTCCCCATGACCTCACCTTGTC...CTTCTTTGGAAAGTAGAACTCTGTAAGCCAGCCCCCATGCTGGTATGGAAGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR-3UTR CCA 90 bp | GCTATTTTAAAAGGCTGGGAGAGGGTTCATAAGGAGAGTAGGAAGTCCCAAGGTCATGCATGCTTAAAATaGACACAAAGCCCAGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: AILKGWERVHKESRKSQGHACLK*TQSPAD Trigger: GTCAGCTGGGCTTTGTGTCCATTTTAAGCATGCATG...ACCTTGGGACTTCCTACTCTCCTTATGAACCCTCTCCCAGCCTTTTAAAATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR-3UTR CCA 90 bp | GCTCTTTTGAGTTCCACTAATTGTGAAGACTCATTTATGAGTCCCACTTCTAAACAAAGCACTACTGAGTaGGAAAGCTGGGGGCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: ALLSSTNCEDSFMSPTSKQSTTE*ESWGLG Trigger: CCCCAGCCCCCAGCTTTCCCACTCAGTAGTGCTTTG...TTTAGAAGTGGGACTCATAAATGAGTCTTCACAATTAGTGGAACTCAAAAGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR-3UTR CCA 90 bp | GTTATTGTGATCATGAGAGTGCACATTTCAGCTCAATGCCCCAGTCTCCCAAAGGCTATTTTAAAAGGCTaGGAGAGGGTTCATAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: VIVIMRVHISAQCPSLPKAILKG*ERVHKE Trigger: CTCCTTATGAACCCTCTCCCAGCCTTTTAAAATAGC...CTTTGGGAGACTGGGGCATTGAGCTGAAATGTGCACTCTCATGATCACAATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR-3UTR TCA 90 bp | GTACATGCACACTTGCAAGTATTTATGCCACTTAGGAACAGGGAAATAATCACAACTATTGTGACAAGGTaGGGTCATGGGGAAGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: VHAHLQVFMPLRNREIITTIVTR*GHGEAE Trigger: CTCTGCTTCCCCATGACCTCACCTTGTCACAATAGT...TGTGATTATTTCCCTGTTCCTAAGTGGCATAAATACTTGCAAGTGTGCATGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR-3UTR TCA 90 bp | GTACATGCACACTTGCAAGTATTTATGCCACTTAGGAACAGGGAAATAATCACACTCAGAATGTCCAGGTaGAAGGAAAGTGGGAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: VHAHLQVFMPLRNREIITLRMSR*KESGKS Trigger: GCTCTTCCCACTTTCCTTTCACCTGGACATTCTGAG...TGTGATTATTTCCCTGTTCCTAAGTGGCATAAATACTTGCAAGTGTGCATGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR-3UTR CCA 90 bp | GCTCTTTTGAGTTCCACTAATTGTGAAGACTCATTTATGAGTCCCACTTCTAAAAGGTTTTCTAAAGTCTaGGGAAGGTGGGTTTGTAGC | + |
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Preference number: 2 (lower is better) Translates to: ALLSSTNCEDSFMSPTSKRFSKV*GRWVCS Trigger: GCTACAAACCCACCTTCCCCAGACTTTAGAAAACCT...TTTAGAAGTGGGACTCATAAATGAGTCTTCACAATTAGTGGAACTCAAAAGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR-3UTR TCA 90 bp | GACTTTCACGAAAAATGCAGGAGGAAGAAGATACAGATGACATTAGGTTACTCATTGATACACAAACAGTaGGAATGTCACACATGCAAC | + |
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Preference number: 2 (lower is better) Translates to: DFHEKCRRKKIQMTLGYSLIHKQ*ECHTCN Trigger: GTTGCATGTGTGACATTCTCACTGTTTGTGTATCAA...TGAGTAACCTAATGTCATCTGTATCTTCTTCCTCCTGCATTTTTCGTGAAAGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR-3UTR TCA 90 bp | GCTCTTTTGAGTTCCACTAATTGTGAAGACTCATTTATGAGTCCCACTTCTAAAGCAAGAAGAGATGTATaGTGTGAACAGAACATATTC | + |
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Preference number: 2 (lower is better) Translates to: ALLSSTNCEDSFMSPTSKARRDV*CEQNIF Trigger: GAATATGTTCTGTTCACATCATACATCTCTTCTTGC...TTTAGAAGTGGGACTCATAAATGAGTCTTCACAATTAGTGGAACTCAAAAGAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR GCA 72 bp | TTTTCTAAAGTCTGGGGAAGGTGGGTTTGTAGCTCATaGATTGGGAAGGTACCTGGGTCCATAGGCAGTTCT | + |
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Preference number: 3 (lower is better) Translates to: FSKVWGRWVCSS*IGKVPGSIGSS Trigger: AGAACTGCCTATGGACCCAGGTACCTTCCCAATGCATGAGCTACAAACCCACCTTCCCCAGACTTTAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR CCA 72 bp | CCCACCAATCTGACAAGCAGTAGGTTTTCTAAAGTCTaGGGAAGGTGGGTTTGTAGCTCATGCATTGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: PTNLTSSRFSKV*GRWVCSSCIGK Trigger: CTTCCCAATGCATGAGCTACAAACCCACCTTCCCCAGACTTTAGAAAACCTACTGCTTGTCAGATTGGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR CCA 72 bp | GAACAGGTTCTGCCTGTCCTGTCCCCAGTAACACCTTaGGATTCTTCCATAGTGAGTACATTTGGGCTAAGA | + |
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Preference number: 3 (lower is better) Translates to: EQVLPVLSPVTP*DSSIVSTFGLR Trigger: TCTTAGCCCAAATGTACTCACTATGGAAGAATCCCAAGGTGTTACTGGGGACAGGACAGGCAGAACCTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR-3UTR CAA 90 bp | AGTCTTCCATACCAGCATGGGGGCTGGCTTACAGAGTTCTACTTTCCAAAGAAGAAGTCCCAAGGTAGGTaGATAGGGAAGGAGACTAAG | + |
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Preference number: 3 (lower is better) Translates to: SLPYQHGGWLTEFYFPKKKSQGR*IGKETK Trigger: CTTAGTCTCCTTCCCTATCAACCTACCTTGGGACTT...CTTCTTTGGAAAGTAGAACTCTGTAAGCCAGCCCCCATGCTGGTATGGAAGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR TCA 72 bp | AGCATATGTTCACAAATGCCAGGCTGCCCACCAATCTaGCAAGCAGTAGGTTTTCTAAAGTCTGGGGAAGGT | + |
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Preference number: 3 (lower is better) Translates to: SICSQMPGCPPI*QAVGFLKSGEG Trigger: ACCTTCCCCAGACTTTAGAAAACCTACTGCTTGTCAGATTGGTGGGCAGCCTGGCATTTGTGAACATATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR GCA 72 bp | CAGCTCAATGCCCCAGTCTCCCAAAGTAGATCCAGCTaGACTGGTATATGCACTTGGACTTTCACGAAAAAT | + |
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Preference number: 3 (lower is better) Translates to: QLNAPVSQSRSS*TGICTWTFTKN Trigger: ATTTTTCGTGAAAGTCCAAGTGCATATACCAGTGCAGCTGGATCTACTTTGGGAGACTGGGGCATTGAGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR-3UTR CAA 90 bp | GTTACAAAGGAGAAAAGGGTCTCAAGTGCCTTACATCAGGGTCATAGGCAGATTGAACACAGACAAACTTaGGTAGAGATGGTCCAGCTC | + |
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Preference number: 3 (lower is better) Translates to: VTKEKRVSSALHQGHRQIEHRQT*VEMVQL Trigger: GAGCTGGACCATCTCTACCAAAGTTTGTCTGTGTTC...AATCTGCCTATGACCCTGATGTAAGGCACTTGAGACCCTTTTCTCCTTTGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR TCA 72 bp | TTGAAGATAAGTCCAAAGTGGCTACCATGTATGGTATaGACAGAAGGCAGACAACCAAACCCACGTGGTCAG | + |
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Preference number: 3 (lower is better) Translates to: LKISPKWLPCMV*TEGRQPNPRGQ Trigger: CTGACCACGTGGGTTTGGTTGTCTGCCTTCTGTTCATACCATACATGGTAGCCACTTTGGACTTATCTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR CCA 72 bp | AAGAGAAATGGCACAGATACCCAGTTGATAAAGATGTaGTCCAAAGCTCTACCCTTCTCAGGGCTCACAACA | + |
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Preference number: 3 (lower is better) Translates to: KRNGTDTQLIKM*SKALPFSGLTT Trigger: TGTTGTGAGCCCTGAGAAGGGTAGAGCTTTGGACCACATCTTTATCAACTGGGTATCTGTGCCATTTCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR-3UTR CAA 90 bp | GTTATTGTGATCATGAGAGTGCACATTTCAGCTCAATGCCCCAGTCTCCCAAAGTATTCTTGTTTTCCCTaGTCCTCATCCACACCAGTA | + |
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Preference number: 3 (lower is better) Translates to: VIVIMRVHISAQCPSLPKYSCFP*SSSTPV Trigger: TACTGGTGTGGATGAGGACAAGGGAAAACAAGAATA...CTTTGGGAGACTGGGGCATTGAGCTGAAATGTGCACTCTCATGATCACAATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR-3UTR CAA 90 bp | AAACAGACAGAAGACACAAGAGACCACAACACTGCTGCCTTAGGGTTTCTAATTGGCACAGATACCCAGTaGATAAAGATGTGGTCCAAA | + |
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Preference number: 3 (lower is better) Translates to: KQTEDTRDHNTAALGFLIGTDTQ*IKMWSK Trigger: TTTGGACCACATCTTTATCAACTGGGTATCTGTGCC...AATTAGAAACCCTAAGGCAGCAGTGTTGTGGTCTCTTGTGTCTTCTGTCTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR TCA 72 bp | CAGGATTCAGGACCTATGTCTGACCATAGACTCTCTTaGGACCTTTTGGTTTTTCTTTATCCTATCTCAGCC | + |
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Preference number: 3 (lower is better) Translates to: QDSGPMSDHRLS*DLLVFLYPISA Trigger: GGCTGAGATAGGATAAAGAAAAACCAAAAGGTCTCAAGAGAGTCTATGGTCAGACATAGGTCCTGAATCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR TCA 72 bp | TGTTTACATACACCTTTAACTCTCCCATCCCAACCCTaGGTAAGGTCTCTTCTGTCACCTTCATCACTAAGA | + |
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Preference number: 3 (lower is better) Translates to: CLHTPLTLPSQP*VRSLLSPSSLR Trigger: TCTTAGTGATGAAGGTGACAGAAGAGACCTTACTCAGGGTTGGGATGGGAGAGTTAAAGGTGTATGTAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR-3UTR CAA 90 bp | GCTATTTTAAAAGGCTGGGAGAGGGTTCATAAGGAGAGTAGGAAGTCCCAAGGTACAAATGTCACATTCTaGAAGATAAGTCCAAAGTGG | + |
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Preference number: 3 (lower is better) Translates to: AILKGWERVHKESRKSQGTNVTF*KISPKW Trigger: CCACTTTGGACTTATCTTCAAGAATGTGACATTTGT...ACCTTGGGACTTCCTACTCTCCTTATGAACCCTCTCCCAGCCTTTTAAAATAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR TCA 72 bp | ACAAACAGTGAGAATGTCACACATGCAACACTATTGTaGCAAGGTGAGGTCATGGGGAAGCAGAGAATATTA | + |
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Preference number: 3 (lower is better) Translates to: TNSENVTHATLL*QGEVMGKQRIL Trigger: TAATATTCTCTGCTTCCCCATGACCTCACCTTGTCACAATAGTGTTGCATGTGTGACATTCTCACTGTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR TCA 72 bp | TCTGCAGCATCACAATGCATTTCTATCAAGTTTTACTaGCCCACTCAATACCAGGTTCATACCTATCTTGCC | + |
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Preference number: 3 (lower is better) Translates to: SAASQCISIKFY*PTQYQVHTYLA Trigger: GGCAAGATAGGTATGAACCTGGTATTGAGTGGGTCAGTAAAACTTGATAGAAATGCATTGTGATGCTGCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR-3UTR CAA 90 bp | GTACATGCACACTTGCAAGTATTTATGCCACTTAGGAACAGGGAAATAATCACAAAAATAGGAAGAACCTaGGTTGATGTCTCCATACCC | + |
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Preference number: 3 (lower is better) Translates to: VHAHLQVFMPLRNREIITKIGRT*VDVSIP Trigger: GGGTATGGAGACATCAACCAAGGTTCTTCCTATTTT...TGTGATTATTTCCCTGTTCCTAAGTGGCATAAATACTTGCAAGTGTGCATGTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR CCA 72 bp | TCACACATGCAACACTATTGTGACAAGGTGAGGTCATaGGGAAGCAGAGAATATTATCACAAATGTCACATT | + |
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Preference number: 3 (lower is better) Translates to: SHMQHYCDKVRS*GSREYYHKCHI Trigger: AATGTGACATTTGTGATAATATTCTCTGCTTCCCCATGACCTCACCTTGTCACAATAGTGTTGCATGTGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| 3UTR-3UTR CAA 90 bp | GACTTTCACGAAAAATGCAGGAGGAAGAAGATACAGATGACATTAGGTTACTCAGAACAGAACATATTCTaGTTTTCCCTTGTCCTCATC | + |
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Preference number: 3 (lower is better) Translates to: DFHEKCRRKKIQMTLGYSEQNIF*FSLVLI Trigger: GATGAGGACAAGGGAAAACAAGAATATGTTCTGTTC...TGAGTAACCTAATGTCATCTGTATCTTCTTCCTCCTGCATTTTTCGTGAAAGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| CDS-3UTR GCA 90 bp | CAGAAGGCAGACAACCAAACCCACGTGGTCAGCCTAACAGGTCCAGCAAGAGGTCTCTGGCCCGGCCTTTaGCCCGGCCTTTGGCGCGGG | + |
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Preference number: 4 (lower is better) Translates to: QKADNQTHVVSLTGPARGLWPGL*PGLWRG Trigger: CCCGCGCCAAAGGCCGGGGCAAAGGCCGGGCCAGAG...ACCTCTTGCTGGACCTGTTAGGCTGACCACGTGGGTTTGGTTGTCTGCCTTCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| CDS-3UTR TCA 90 bp | GTTACAAAGGAGAAAAGGGTCTCAAGTGCCTTACATCAGGGTCATAGGCAGATTCCACTAACTGTGGCCTaGGGTCCCCTCCCCGTGGCG | + |
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Preference number: 4 (lower is better) Translates to: VTKEKRVSSALHQGHRQIPLTVA*GPLPVA Trigger: CGCCACGGGGAGGGGACCTCAGGCCACAGTTAGTGG...AATCTGCCTATGACCCTGATGTAAGGCACTTGAGACCCTTTTCTCCTTTGTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| CDS-3UTR TCA 90 bp | GTGATTGATACACAAACAGTGAGAATGTCACACATGCAACACTATTGTGACAAGGGTTCGGCGCCTCCTTaGGCTGCGCCGGCCTGCACC | + |
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Preference number: 4 (lower is better) Translates to: VIDTQTVRMSHMQHYCDKGSAPP*AAPACT Trigger: GGTGCAGGCCGGCGCAGCTCAAGGAGGCGCCGAACC...CTTGTCACAATAGTGTTGCATGTGTGACATTCTCACTGTTTGTGTATCAATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| CDS-3UTR CCA 90 bp | GCAGTTCTTGAGGTCTTTGATAAGCAAGATGGAGCCAATAACACCCACCTAGCCTTTTTCCTCCCCCACTaGAGCAGCGGCGCACAACCC | + |
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Preference number: 4 (lower is better) Translates to: AVLEVFDKQDGANNTHLAFFLPH*SSGAQP Trigger: GGGTTGTGCGCCGCTGCTCCAGTGGGGGAGGAAAAA...GGCTAGGTGGGTGTTATTGGCTCCATCTTGCTTATCAAAGACCTCAAGAACTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| CDS-3UTR TCA 90 bp | AGTCTTCCATACCAGCATGGGGGCTGGCTTACAGAGTTCTACTTTCCAAAGAAGCGGCGCTCTAAGTGGTaGAGTCGCAACTGGCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: SLPYQHGGWLTEFYFPKKRRSKW*SRNWPN Trigger: GTTTGGCCAGTTGCGACTTCACCACTTAGAGCGCCG...CTTCTTTGGAAAGTAGAACTCTGTAAGCCAGCCCCCATGCTGGTATGGAAGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| CDS-3UTR CCA 90 bp | AGAAGACACAAGAGACCACAACACTGCTGCCTTAGGGTTTCTAATTCTAGCAGACGGTTCCCACGAAGCTaGTGTCGCTGGTCAGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: RRHKRPQHCCLRVSNSSRRFPRS*CRWSGA Trigger: AGCGCCTGACCAGCGACACCAGCTTCGTGGGAACCG...TCTGCTAGAATTAGAAACCCTAAGGCAGCAGTGTTGTGGTCTCTTGTGTCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| CDS-3UTR GCA 90 bp | TCTTTATCCTATCTCAGCCTACTACATGAGTGTGCAAAGGAAGCCTCTTTCTGCTGTCGCGGGAGACCCTaGCCCAGCATGCTTCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: SLSYLSLLHECAKEASFCCRGRP*PSMLLC Trigger: ACAGAGAAGCATGCTGGGGCAGGGTCTCCCGCGACA...GCAGAAAGAGGCTTCCTTTGCACACTCATGTAGTAGGCTGAGATAGGATAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| CDS-3UTR GCA 90 bp | GCTATTTTAAAAGGCTGGGAGAGGGTTCATAAGGAGAGTAGGAAGTCCCAAGGTGTTGGGCTGCCTCACTaGAGGTGCAGGGCTCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: AILKGWERVHKESRKSQGVGLPH*RCRAQF Trigger: AAACTGAGCCCTGCACCTGCAGTGAGGCAGCCCAAC...ACCTTGGGACTTCCTACTCTCCTTATGAACCCTCTCCCAGCCTTTTAAAATAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| CDS-3UTR CCA 90 bp | GTTACAAAGGAGAAAAGGGTCTCAAGTGCCTTACATCAGGGTCATAGGCAGATTCTTTGCCCCGGCCTTTaGCGCGGGAAGACTTTCGAC | + |
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Preference number: 4 (lower is better) Translates to: VTKEKRVSSALHQGHRQILCPGL*RGKTFD Trigger: GTCGAAAGTCTTCCCGCGCCAAAGGCCGGGGCAAAG...AATCTGCCTATGACCCTGATGTAAGGCACTTGAGACCCTTTTCTCCTTTGTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| CDS-3UTR TCA 90 bp | AACATATTCTTGTTTTCCCTTGTCCTCATCCACACCAGTAGTCTGCTGGACCTAGAACGAGACACCACTTaGCCGGATGGACCACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: NIFLFSLVLIHTSSLLDLERDTT*PDGPQP Trigger: TGGCTGTGGTCCATCCGGTCAAGTGGTGTCTCGTTC...TAGGTCCAGCAGACTACTGGTGTGGATGAGGACAAGGGAAAACAAGAATATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| CDS-3UTR GCA 90 bp | AGGGTTCATAAGGAGAGTAGGAAGTCCCAAGGTAGGTTGATAGGGAAGGAGACTTGCAGGGCTCAGTTTTaGTGGACCTGGCCTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RVHKESRKSQGRLIGKETCRAQF*WTWPFF Trigger: GAAGAAAGGCCAGGTCCAGCAAAACTGAGCCCTGCA...AGTCTCCTTCCCTATCAACCTACCTTGGGACTTCCTACTCTCCTTATGAACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS-3UTR CCA 90 bp | AACATATTCTTGTTTTCCCTTGTCCTCATCCACACCAGTAGTCTGCTGGACCTATGGCCTGGGAGCCACTaGATTGGAGCTGAACGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: NIFLFSLVLIHTSSLLDLWPGSH*IGAERD Trigger: GTCTCGTTCAGCTCCAATCCAGTGGCTCCCAGGCCA...TAGGTCCAGCAGACTACTGGTGTGGATGAGGACAAGGGAAAACAAGAATATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS-3UTR CCA 90 bp | AGGGTTCATAAGGAGAGTAGGAAGTCCCAAGGTAGGTTGATAGGGAAGGAGACTAGGGATTGTAGATCATaGCCTGGGAGCCACTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: RVHKESRKSQGRLIGKETRDCRS*PGSHWI Trigger: AATCCAGTGGCTCCCAGGCCATGATCTACAATCCCT...AGTCTCCTTCCCTATCAACCTACCTTGGGACTTCCTACTCTCCTTATGAACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS-3UTR CCA 90 bp | AGTCTTCCATACCAGCATGGGGGCTGGCTTACAGAGTTCTACTTTCCAAAGAAGAGGGCTCAGTTTTGCTaGACCTGGCCTTTCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLPYQHGGWLTEFYFPKKRAQFC*TWPFFL Trigger: AAGGAAGAAAGGCCAGGTCCAGCAAAACTGAGCCCT...CTTCTTTGGAAAGTAGAACTCTGTAAGCCAGCCCCCATGCTGGTATGGAAGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| 3UTR CAA 72 bp | AGAACAGGTTCTGCCTGTCCTGTCCCCAGTAACACCTaGGGATTCTTCCATAGTGAGTACATTTGGGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: RTGSACPVPSNT*GFFHSEYIWAK Trigger: CTTAGCCCAAATGTACTCACTATGGAAGAATCCCAAGGTGTTACTGGGGACAGGACAGGCAGAACCTGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS-3UTR TCA 90 bp | AAACAGACAGAAGACACAAGAGACCACAACACTGCTGCCTTAGGGTTTCTAATTCCACTGGATTGGAGCTaGACGAGACACCACTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: KQTEDTRDHNTAALGFLIPLDWS*TRHHLT Trigger: GGTCAAGTGGTGTCTCGTTCAGCTCCAATCCAGTGG...AATTAGAAACCCTAAGGCAGCAGTGTTGTGGTCTCTTGTGTCTTCTGTCTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS-3UTR CCA 90 bp | GCAGTTCTTGAGGTCTTTGATAAGCAAGATGGAGCCAATAACACCCACCTAGCCCAGCCTGTGCATTCATaGTCTCTAGCTTTAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AVLEVFDKQDGANNTHLAQPVHS*SLALAG Trigger: TCCAGCTAAAGCTAGAGACCATGAATGCACAGGCTG...GGCTAGGTGGGTGTTATTGGCTCCATCTTGCTTATCAAAGACCTCAAGAACTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS-3UTR CCA 90 bp | GGTAGAGATGGTCCAGCTCAGCCTGCACACTTACCAGAAATATCTAGAACAGGTTTTTGTAGCCCAACCTaGCAAGGCCAAGTTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRDGPAQPAHLPEISRTGFCSPT*QGQVLP Trigger: TGGAAGAACTTGGCCTTGCCAGGTTGGGCTACAAAA...ACCTGTTCTAGATATTTCTGGTAAGTGTGCAGGCTGAGCTGGACCATCTCTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS-3UTR TCA 90 bp | GATGCATACAACTTTAGAACTACTGAACAAAGCCAGGATTCAGGACCTATGTCTAGCTGGGGATGGTTCTaGAAAGCTTGCCCCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DAYNFRTTEQSQDSGPMSSWGWF*KACPQK Trigger: CTTCTGGGGGCAAGCTTTTCAGAACCATCCCCAGCT...AGACATAGGTCCTGAATCCTGGCTTTGTTCAGTAGTTCTAAAGTTGTATGCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS-3UTR CCA 90 bp | ACACAGACAAACTTTGGTAGAGATGGTCCAGCTCAGCCTGCACACTTACCAGAACAGTTTTGCTGGACCTaGCCTTTCTTCCTTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TQTNFGRDGPAQPAHLPEQFCWT*PFFLSF Trigger: AAAGGAAAGGAAGAAAGGCCAGGTCCAGCAAAACTG...TTCTGGTAAGTGTGCAGGCTGAGCTGGACCATCTCTACCAAAGTTTGTCTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| 3UTR CAA 72 bp | AGGGTTCATAAGGAGAGTAGGAAGTCCCAAGGTAGGTaGATAGGGAAGGAGACTAAGTTGCATGAAGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RVHKESRKSQGR*IGKETKLHEGV Trigger: CACACCTTCATGCAACTTAGTCTCCTTCCCTATCAACCTACCTTGGGACTTCCTACTCTCCTTATGAACCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS-3UTR TCA 90 bp | TCTTTATCCTATCTCAGCCTACTACATGAGTGTGCAAAGGAAGCCTCTTTCTGCGGCCAAAGTAGAACTTaGTTTTGTAGCCCAACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLSYLSLLHECAKEASFCGQSRT*FCSPTW Trigger: CCAGGTTGGGCTACAAAATCAAGTTCTACTTTGGCC...GCAGAAAGAGGCTTCCTTTGCACACTCATGTAGTAGGCTGAGATAGGATAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS-3UTR TCA 90 bp | GCCAGGATTCAGGACCTATGTCTGACCATAGACTCTCTTGAGACCTTTTGGTTTGACTCAATAGAGCTGTaGTTTGAAAACCACCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ARIQDLCLTIDSLETFWFDSIEL*FENHPK Trigger: CTTTGGGTGGTTTTCAAATCACAGCTCTATTGAGTC...AAACCAAAAGGTCTCAAGAGAGTCTATGGTCAGACATAGGTCCTGAATCCTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| 3UTR CAA 72 bp | CTTTCCAAAGAAGATAAGTCAGAACACAGACAAACTTaGGTAGAGATGGTCCAGCTCAGCCTGCACACTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LSKEDKSEHRQT*VEMVQLSLHTY Trigger: GTAAGTGTGCAGGCTGAGCTGGACCATCTCTACCAAAGTTTGTCTGTGTTCTGACTTATCTTCTTTGGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS-3UTR TCA 90 bp | GCTATTTTAAAAGGCTGGGAGAGGGTTCATAAGGAGAGTAGGAAGTCCCAAGGTAATAGAGCTGTGATTTaGAAACCACCCAAAGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AILKGWERVHKESRKSQGNRAVI*KPPKEA Trigger: AGCTTCTTTGGGTGGTTTTCAAATCACAGCTCTATT...ACCTTGGGACTTCCTACTCTCCTTATGAACCCTCTCCCAGCCTTTTAAAATAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS-3UTR CCA 90 bp | GTACATGCACACTTGCAAGTATTTATGCCACTTAGGAACAGGGAAATAATCACACACCACTTGACCGGATaGACCACAGCCATATTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VHAHLQVFMPLRNREIITHHLTG*TTAIFL Trigger: AAGGAATATGGCTGTGGTCCATCCGGTCAAGTGGTG...TGTGATTATTTCCCTGTTCCTAAGTGGCATAAATACTTGCAAGTGTGCATGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS TCA 90 bp | CGGCAGGCCGCCTCTTCCCGCAGCTCGGCTGGTTCGGCGCCTCCTTaGGCTGCGCCGGCCTGCACCTGCGCGGCCGCGGAGTCCTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: RQAASSRSSAGSAPP*AAPACTCAAAESSP Trigger: CGGGGAGGACTCCGCGGCCGCGCAGGTGCAGGCCGGCGCAGCTCAAGGAGGCGCCGAACCAGCCGAGCTGCGGGAAGAGGCGGCCTGCCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS GCA 90 bp | GGCCGCCTCTTCCCGCAGCTCGGCTGGTTCGGCGCCTCCTTGAGCTaGGCCGGCCTGCACCTGCGCGGCCGCGGAGTCCTCCCCGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GRLFPQLGWFGASLS*AGLHLRGRGVLPEP Trigger: CGGCTCGGGGAGGACTCCGCGGCCGCGCAGGTGCAGGCCGGCGCAGCTCAAGGAGGCGCCGAACCAGCCGAGCTGCGGGAAGAGGCGGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS GCA 90 bp | GCGGAGTCCTCCCCGAGCCGCGGGCTCTGTGGTGGCTTTTCGTCGTaGCAGGCGTCTTCCGCAGCGGCCCGGACCCGGGCTCTGGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: AESSPSRGLCGGFSS*QASSAAARTRALAR Trigger: CCGGGCCAGAGCCCGGGTCCGGGCCGCTGCGGAAGACGCCTGGCACGACGAAAAGCCACCACAGAGCCCGCGGCTCGGGGAGGACTCCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS CCA 90 bp | CACCTGCGCGGCCGCGGAGTCCTCCCCGAGCCGCGGGCTCTGTGGTaGCTTTTCGTCGTGCCAGGCGTCTTCCGCAGCGGCCCGGACCCG | + |
|
Preference number: 5 (lower is better) Translates to: HLRGRGVLPEPRALW*LFVVPGVFRSGPDP Trigger: CGGGTCCGGGCCGCTGCGGAAGACGCCTGGCACGACGAAAAGCCACCACAGAGCCCGCGGCTCGGGGAGGACTCCGCGGCCGCGCAGGTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS CCA 90 bp | CTGCACCTGCGCGGCCGCGGAGTCCTCCCCGAGCCGCGGGCTCTGTaGTGGCTTTTCGTCGTGCCAGGCGTCTTCCGCAGCGGCCCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LHLRGRGVLPEPRAL*WLFVVPGVFRSGPD Trigger: GTCCGGGCCGCTGCGGAAGACGCCTGGCACGACGAAAAGCCACCACAGAGCCCGCGGCTCGGGGAGGACTCCGCGGCCGCGCAGGTGCAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS GCA 90 bp | AGGCGTCTTCCGCAGCGGCCCGGACCCGGGCTCTGGCCCGGCCTTTaGCCCGGCCTTTGGCGCGGGAAGACTTTCGACCCCTACTCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: RRLPQRPGPGLWPGL*PGLWRGKTFDPYSV Trigger: GACGGAGTAGGGGTCGAAAGTCTTCCCGCGCCAAAGGCCGGGGCAAAGGCCGGGCCAGAGCCCGGGTCCGGGCCGCTGCGGAAGACGCCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS CCA 90 bp | TTTCGTCGTGCCAGGCGTCTTCCGCAGCGGCCCGGACCCGGGCTCTaGCCCGGCCTTTGCCCCGGCCTTTGGCGCGGGAAGACTTTCGAC | + |
|
Preference number: 5 (lower is better) Translates to: FRRARRLPQRPGPGL*PGLCPGLWRGKTFD Trigger: GTCGAAAGTCTTCCCGCGCCAAAGGCCGGGGCAAAGGCCGGGCCAGAGCCCGGGTCCGGGCCGCTGCGGAAGACGCCTGGCACGACGAAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS CCA 90 bp | AGCCGCGTCGCAGCTTCGCCAAGGCTCCCACGGTTCCCACGAAGCTaGTGTCGCTGGTCAGGCGCTCGGCGAGGGAACGGGCCCTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SRVAASPRLPRFPRS*CRWSGARRGNGPSP Trigger: TGGAGAGGGCCCGTTCCCTCGCCGAGCGCCTGACCAGCGACACCAGCTTCGTGGGAACCGTGGGAGCCTTGGCGAAGCTGCGACGCGGCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS CCA 90 bp | GCAGCTTCGCCAAGGCTCCCACGGTTCCCACGAAGCTGGTGTCGCTaGTCAGGCGCTCGGCGAGGGAACGGGCCCTCTCCAGGTCCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: AASPRLPRFPRSWCR*SGARRGNGPSPGPD Trigger: ATCCGGACCTGGAGAGGGCCCGTTCCCTCGCCGAGCGCCTGACCAGCGACACCAGCTTCGTGGGAACCGTGGGAGCCTTGGCGAAGCTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS-3UTR CAA 90 bp | GCCAGGATTCAGGACCTATGTCTGACCATAGACTCTCTTGAGACCTTTTGGTTTGCTCTGGCCCGGCCTTaGCCCCGGCCTTTGGCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ARIQDLCLTIDSLETFWFALARP*PRPLAR Trigger: CCGCGCCAAAGGCCGGGGCAAAGGCCGGGCCAGAGC...AAACCAAAAGGTCTCAAGAGAGTCTATGGTCAGACATAGGTCCTGAATCCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS GCA 90 bp | TCATGGTCTCTAGCTTTAGCTGGACCGTCTCTAGGGTATCCATGCTaGCCACTGTCGCGGGAGACCCTGCCCCAGCATGCTTCTCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SWSLALAGPSLGYPC*PLSRETLPQHASLS Trigger: TGACAGAGAAGCATGCTGGGGCAGGGTCTCCCGCGACAGTGGGCAGCATGGATACCCTAGAGACGGTCCAGCTAAAGCTAGAGACCATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS TCA 90 bp | AAGCCCGGAATGCTCTGGATGAGGAGGTTCCGGCGCTCTAAGTGGTaGAGTCGCAACTGGCCAAACTTGCGTGAAAGCCTGAGATATGCC | + |
|
Preference number: 5 (lower is better) Translates to: KPGMLWMRRFRRSKW*SRNWPNLRESLRYA Trigger: GGCATATCTCAGGCTTTCACGCAAGTTTGGCCAGTTGCGACTTCACCACTTAGAGCGCCGGAACCTCCTCATCCAGAGCATTCCGGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS-3UTR CAA 90 bp | GGTAGAGATGGTCCAGCTCAGCCTGCACACTTACCAGAAATATCTAGAACAGGTCCTTTGCCCCGGCCTTaGGCGCGGGAAGACTTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: GRDGPAQPAHLPEISRTGPLPRP*AREDFR Trigger: TCGAAAGTCTTCCCGCGCCAAAGGCCGGGGCAAAGG...ACCTGTTCTAGATATTTCTGGTAAGTGTGCAGGCTGAGCTGGACCATCTCTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS-3UTR CAA 90 bp | GTACATGCACACTTGCAAGTATTTATGCCACTTAGGAACAGGGAAATAATCACACTGGGAGCCACTGGATaGGAGCTGAACGAGACACCA | + |
|
Preference number: 5 (lower is better) Translates to: VHAHLQVFMPLRNREIITLGATG*ELNETP Trigger: TGGTGTCTCGTTCAGCTCCAATCCAGTGGCTCCCAG...TGTGATTATTTCCCTGTTCCTAAGTGGCATAAATACTTGCAAGTGTGCATGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS-3UTR CAA 90 bp | GTTACAAAGGAGAAAAGGGTCTCAAGTGCCTTACATCAGGGTCATAGGCAGATTATTATCTCAACAATCTaGTCAGACTCAATAGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VTKEKRVSSALHQGHRQIIISTI*SDSIEL Trigger: CAGCTCTATTGAGTCTGACAAGATTGTTGAGATAAT...AATCTGCCTATGACCCTGATGTAAGGCACTTGAGACCCTTTTCTCCTTTGTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS-3UTR CAA 90 bp | GACTTTCACGAAAAATGCAGGAGGAAGAAGATACAGATGACATTAGGTTACTCAAATACCTCCTTATCTTaGGTATTCAGAAAAGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: DFHEKCRRKKIQMTLGYSNTSLS*VFRKAD Trigger: GTCAGCTTTTCTGAATACCAAAGATAAGGAGGTATT...TGAGTAACCTAATGTCATCTGTATCTTCTTCCTCCTGCATTTTTCGTGAAAGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS TCA 90 bp | TCCTCATTAATTATCTCAACAATCTTGTCAGACTCAATAGAGCTGTaGTTTGAAAACCACCCAAAGAAGCTACCATTGTTTTCTGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSLIISTILSDSIEL*FENHPKKLPLFSGF Trigger: AAACCCAGAAAACAATGGTAGCTTCTTTGGGTGGTTTTCAAATCACAGCTCTATTGAGTCTGACAAGATTGTTGAGATAATTAATGAGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS CCA 72 bp | GCCAGGCGTCTTCCGCAGCGGCCCGGACCCGGGCTCTaGCCCGGCCTTTGCCCCGGCCTTTGGCGCGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ARRLPQRPGPGL*PGLCPGLWRGK Trigger: CTTCCCGCGCCAAAGGCCGGGGCAAAGGCCGGGCCAGAGCCCGGGTCCGGGCCGCTGCGGAAGACGCCTGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS GCA 72 bp | TCCCCGAGCCGCGGGCTCTGTGGTGGCTTTTCGTCGTaGCAGGCGTCTTCCGCAGCGGCCCGGACCCGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SPSRGLCGGFSS*QASSAAARTRA Trigger: AGCCCGGGTCCGGGCCGCTGCGGAAGACGCCTGGCACGACGAAAAGCCACCACAGAGCCCGCGGCTCGGGGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS CCA 72 bp | GGCCGCGGAGTCCTCCCCGAGCCGCGGGCTCTGTGGTaGCTTTTCGTCGTGCCAGGCGTCTTCCGCAGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: GRGVLPEPRALW*LFVVPGVFRSG Trigger: GCCGCTGCGGAAGACGCCTGGCACGACGAAAAGCCACCACAGAGCCCGCGGCTCGGGGAGGACTCCGCGGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS CCA 72 bp | CGCGGCCGCGGAGTCCTCCCCGAGCCGCGGGCTCTGTaGTGGCTTTTCGTCGTGCCAGGCGTCTTCCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RGRGVLPEPRAL*WLFVVPGVFRS Trigger: GCTGCGGAAGACGCCTGGCACGACGAAAAGCCACCACAGAGCCCGCGGCTCGGGGAGGACTCCGCGGCCGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS CAA 90 bp | CAGGCGTCTTCCGCAGCGGCCCGGACCCGGGCTCTGGCCCGGCCTTaGCCCCGGCCTTTGGCGCGGGAAGACTTTCGACCCCTACTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: QASSAAARTRALARP*PRPLAREDFRPLLR Trigger: ACGGAGTAGGGGTCGAAAGTCTTCCCGCGCCAAAGGCCGGGGCAAAGGCCGGGCCAGAGCCCGGGTCCGGGCCGCTGCGGAAGACGCCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS CCA 72 bp | CCAAGGCTCCCACGGTTCCCACGAAGCTGGTGTCGCTaGTCAGGCGCTCGGCGAGGGAACGGGCCCTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PRLPRFPRSWCR*SGARRGNGPSP Trigger: TGGAGAGGGCCCGTTCCCTCGCCGAGCGCCTGACCAGCGACACCAGCTTCGTGGGAACCGTGGGAGCCTTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS CCA 72 bp | GCAGCTTCGCCAAGGCTCCCACGGTTCCCACGAAGCTaGTGTCGCTGGTCAGGCGCTCGGCGAGGGAACGGG | + |
|
Preference number: 6 (lower is better) Translates to: AASPRLPRFPRS*CRWSGARRGNG Trigger: CCCGTTCCCTCGCCGAGCGCCTGACCAGCGACACCAGCTTCGTGGGAACCGTGGGAGCCTTGGCGAAGCTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS TCA 72 bp | GCAGAGGCCATCTTCGGCTTCCCACTAACTGTGGCCTaGGGTCCCCTCCCCGTGGCGCTCCGAGTATCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: AEAIFGFPLTVA*GPLPVALRVSG Trigger: CCCAGATACTCGGAGCGCCACGGGGAGGGGACCTCAGGCCACAGTTAGTGGGAAGCCGAAGATGGCCTCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS GCA 72 bp | CTAGCTTTAGCTGGACCGTCTCTAGGGTATCCATGCTaGCCACTGTCGCGGGAGACCCTGCCCCAGCATGCT | + |
|
Preference number: 6 (lower is better) Translates to: LALAGPSLGYPC*PLSRETLPQHA Trigger: AGCATGCTGGGGCAGGGTCTCCCGCGACAGTGGGCAGCATGGATACCCTAGAGACGGTCCAGCTAAAGCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS TCA 72 bp | GAAAAGCTTGCCCCCAGAAGCCCGGAATGCTCTGGATaGGGAGGTTCCGGCGCTCTAAGTGGTGAAGTCGCA | + |
|
Preference number: 6 (lower is better) Translates to: EKLAPRSPECSG*GGSGALSGEVA Trigger: TGCGACTTCACCACTTAGAGCGCCGGAACCTCCTCATCCAGAGCATTCCGGGCTTCTGGGGGCAAGCTTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS TCA 72 bp | ATGCTCTGGATGAGGAGGTTCCGGCGCTCTAAGTGGTaGAGTCGCAACTGGCCAAACTTGCGTGAAAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: MLWMRRFRRSKW*SRNWPNLRESL Trigger: CAGGCTTTCACGCAAGTTTGGCCAGTTGCGACTTCACCACTTAGAGCGCCGGAACCTCCTCATCCAGAGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS CCA 72 bp | CTGTCAGCCTGTGCATTCATGGTCTCTAGCTTTAGCTaGACCGTCTCTAGGGTATCCATGCTGCCCACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: LSACAFMVSSFS*TVSRVSMLPTV Trigger: GACAGTGGGCAGCATGGATACCCTAGAGACGGTCCAGCTAAAGCTAGAGACCATGAATGCACAGGCTGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS CAA 90 bp | TTTCCTTGCTTAGGGATTGTAGATCATGGCCTGGGAGCCACTGGATaGGAGCTGAACGAGACACCACTTGACCGGATGGACCACAGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: FPCLGIVDHGLGATG*ELNETPLDRMDHSH Trigger: ATGGCTGTGGTCCATCCGGTCAAGTGGTGTCTCGTTCAGCTCCAATCCAGTGGCTCCCAGGCCATGATCTACAATCCCTAAGCAAGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS CCA 72 bp | TTTTCTGGGTTTTCCTTGCTTAGGGATTGTAGATCATaGCCTGGGAGCCACTGGATTGGAGCTGAACGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: FSGFSLLRDCRS*PGSHWIGAERD Trigger: GTCTCGTTCAGCTCCAATCCAGTGGCTCCCAGGCCATGATCTACAATCCCTAAGCAAGGAAAACCCAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
||
| CDS TCA 72 bp | CTCAACAATCTTGTCAGACTCAATAGAGCTGTGATTTaGAAACCACCCAAAGAAGCTACCATTGTTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: LNNLVRLNRAVI*KPPKEATIVFW Trigger: CCAGAAAACAATGGTAGCTTCTTTGGGTGGTTTTCAAATCACAGCTCTATTGAGTCTGACAAGATTGTTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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| CDS TCA 72 bp | ATTATCTCAACAATCTTGTCAGACTCAATAGAGCTGTaGTTTGAAAACCACCCAAAGAAGCTACCATTGTTT | + |
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Preference number: 6 (lower is better) Translates to: IISTILSDSIEL*FENHPKKLPLF Trigger: AAACAATGGTAGCTTCTTTGGGTGGTTTTCAAATCACAGCTCTATTGAGTCTGACAAGATTGTTGAGATAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042021.5 |
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